data_4CK0 # _entry.id 4CK0 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.385 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4CK0 pdb_00004ck0 10.2210/pdb4ck0/pdb PDBE EBI-57036 ? ? WWPDB D_1290057036 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2015-01-28 2 'Structure model' 1 1 2016-11-16 3 'Structure model' 1 2 2019-03-06 4 'Structure model' 1 3 2019-04-03 5 'Structure model' 1 4 2023-03-29 6 'Structure model' 1 5 2024-02-07 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Experimental preparation' 4 3 'Structure model' Other 5 4 'Structure model' 'Data collection' 6 4 'Structure model' 'Experimental preparation' 7 5 'Structure model' 'Database references' 8 5 'Structure model' 'Derived calculations' 9 5 'Structure model' Other 10 5 'Structure model' 'Structure summary' 11 6 'Structure model' 'Data collection' 12 6 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' exptl_crystal_grow 2 3 'Structure model' pdbx_database_proc 3 3 'Structure model' pdbx_database_status 4 4 'Structure model' exptl_crystal_grow 5 5 'Structure model' audit_author 6 5 'Structure model' database_2 7 5 'Structure model' pdbx_database_status 8 5 'Structure model' pdbx_struct_conn_angle 9 5 'Structure model' struct_conn 10 5 'Structure model' struct_site 11 6 'Structure model' chem_comp_atom 12 6 'Structure model' chem_comp_bond 13 6 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_exptl_crystal_grow.method' 2 3 'Structure model' '_pdbx_database_status.recvd_author_approval' 3 4 'Structure model' '_exptl_crystal_grow.temp' 4 5 'Structure model' '_audit_author.identifier_ORCID' 5 5 'Structure model' '_database_2.pdbx_DOI' 6 5 'Structure model' '_database_2.pdbx_database_accession' 7 5 'Structure model' '_pdbx_database_status.status_code_sf' 8 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 9 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 10 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 11 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 12 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 13 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 14 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 15 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 16 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 17 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 18 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 19 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 20 5 'Structure model' '_pdbx_struct_conn_angle.value' 21 5 'Structure model' '_struct_conn.pdbx_dist_value' 22 5 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 23 5 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 24 5 'Structure model' '_struct_conn.ptnr1_label_asym_id' 25 5 'Structure model' '_struct_conn.ptnr1_label_atom_id' 26 5 'Structure model' '_struct_conn.ptnr1_label_comp_id' 27 5 'Structure model' '_struct_conn.ptnr1_label_seq_id' 28 5 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 29 5 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 30 5 'Structure model' '_struct_conn.ptnr2_label_asym_id' 31 5 'Structure model' '_struct_conn.ptnr2_label_atom_id' 32 5 'Structure model' '_struct_conn.ptnr2_label_comp_id' 33 5 'Structure model' '_struct_conn.ptnr2_label_seq_id' 34 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 35 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 36 5 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4CK0 _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2013-12-23 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 4CJZ _pdbx_database_related.content_type unspecified _pdbx_database_related.details 'CRYSTAL STRUCTURE OF THE INTEGRAL MEMBRANE DIACYLGLYCEROL KINASE DGKA-9.9, DELTA 4' # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Li, D.' 1 ? 'Lyons, J.A.' 2 ? 'Vogeley, L.' 3 ? 'Aragao, D.' 4 0000-0002-6551-4657 'Caffrey, M.' 5 ? # _citation.id primary _citation.title 'Crystal Structure of the Integral Membrane Diacylglycerol Kinase with Zn-Amppcp Bound and its Catalytic Mechanism' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Li, D.' 1 ? primary 'Caffrey, M.' 2 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'DIACYLGLYCEROL KINASE' 14240.527 3 2.7.1.107 YES ? ? 2 non-polymer syn '(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate' 356.540 2 ? ? ? ? 3 non-polymer syn 'ZINC ION' 65.409 2 ? ? ? ? 4 non-polymer syn 'PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER' 505.208 1 ? ? ? ? 5 water nat water 18.015 1 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'DAGK, DIGLYCERIDE KINASE, DGK, DIACYLGLYCEROL KINASE -DELTA 4' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GHHHHHHELANNTTGFTRIIKAAGYSWKGLRAAWINEAAFRQEGVAVLLAVVIACWLDVDACTRVLLISSVMLVMIVELL NSAIEAVVDRIGSEYHELSGRAKDLGSAAVLIAIIDAVITWCILLWSHFG ; _entity_poly.pdbx_seq_one_letter_code_can ;GHHHHHHELANNTTGFTRIIKAAGYSWKGLRAAWINEAAFRQEGVAVLLAVVIACWLDVDACTRVLLISSVMLVMIVELL NSAIEAVVDRIGSEYHELSGRAKDLGSAAVLIAIIDAVITWCILLWSHFG ; _entity_poly.pdbx_strand_id A,B,C _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 '(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate' OLC 3 'ZINC ION' ZN 4 'PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER' ACP 5 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 HIS n 1 3 HIS n 1 4 HIS n 1 5 HIS n 1 6 HIS n 1 7 HIS n 1 8 GLU n 1 9 LEU n 1 10 ALA n 1 11 ASN n 1 12 ASN n 1 13 THR n 1 14 THR n 1 15 GLY n 1 16 PHE n 1 17 THR n 1 18 ARG n 1 19 ILE n 1 20 ILE n 1 21 LYS n 1 22 ALA n 1 23 ALA n 1 24 GLY n 1 25 TYR n 1 26 SER n 1 27 TRP n 1 28 LYS n 1 29 GLY n 1 30 LEU n 1 31 ARG n 1 32 ALA n 1 33 ALA n 1 34 TRP n 1 35 ILE n 1 36 ASN n 1 37 GLU n 1 38 ALA n 1 39 ALA n 1 40 PHE n 1 41 ARG n 1 42 GLN n 1 43 GLU n 1 44 GLY n 1 45 VAL n 1 46 ALA n 1 47 VAL n 1 48 LEU n 1 49 LEU n 1 50 ALA n 1 51 VAL n 1 52 VAL n 1 53 ILE n 1 54 ALA n 1 55 CYS n 1 56 TRP n 1 57 LEU n 1 58 ASP n 1 59 VAL n 1 60 ASP n 1 61 ALA n 1 62 CYS n 1 63 THR n 1 64 ARG n 1 65 VAL n 1 66 LEU n 1 67 LEU n 1 68 ILE n 1 69 SER n 1 70 SER n 1 71 VAL n 1 72 MET n 1 73 LEU n 1 74 VAL n 1 75 MET n 1 76 ILE n 1 77 VAL n 1 78 GLU n 1 79 LEU n 1 80 LEU n 1 81 ASN n 1 82 SER n 1 83 ALA n 1 84 ILE n 1 85 GLU n 1 86 ALA n 1 87 VAL n 1 88 VAL n 1 89 ASP n 1 90 ARG n 1 91 ILE n 1 92 GLY n 1 93 SER n 1 94 GLU n 1 95 TYR n 1 96 HIS n 1 97 GLU n 1 98 LEU n 1 99 SER n 1 100 GLY n 1 101 ARG n 1 102 ALA n 1 103 LYS n 1 104 ASP n 1 105 LEU n 1 106 GLY n 1 107 SER n 1 108 ALA n 1 109 ALA n 1 110 VAL n 1 111 LEU n 1 112 ILE n 1 113 ALA n 1 114 ILE n 1 115 ILE n 1 116 ASP n 1 117 ALA n 1 118 VAL n 1 119 ILE n 1 120 THR n 1 121 TRP n 1 122 CYS n 1 123 ILE n 1 124 LEU n 1 125 LEU n 1 126 TRP n 1 127 SER n 1 128 HIS n 1 129 PHE n 1 130 GLY n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain K-12 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'ESCHERICHIA COLI' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 83333 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc 29425 _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'ESCHERICHIA COLI' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain WH1061 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector PTRCHISB _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name 'PTRCHISB-DGKA-DELTA 4' _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ACP non-polymer . 'PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER' ;ADENOSINE-5'-[BETA, GAMMA-METHYLENE]TRIPHOSPHATE ; 'C11 H18 N5 O12 P3' 505.208 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 OLC non-polymer . '(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate' 1-Oleoyl-R-glycerol 'C21 H40 O4' 356.540 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 -8 ? ? ? A . n A 1 2 HIS 2 -7 ? ? ? A . n A 1 3 HIS 3 -6 ? ? ? A . n A 1 4 HIS 4 -5 ? ? ? A . n A 1 5 HIS 5 -4 ? ? ? A . n A 1 6 HIS 6 -3 ? ? ? A . n A 1 7 HIS 7 -2 ? ? ? A . n A 1 8 GLU 8 -1 ? ? ? A . n A 1 9 LEU 9 0 ? ? ? A . n A 1 10 ALA 10 1 ? ? ? A . n A 1 11 ASN 11 2 ? ? ? A . n A 1 12 ASN 12 3 ? ? ? A . n A 1 13 THR 13 4 ? ? ? A . n A 1 14 THR 14 5 ? ? ? A . n A 1 15 GLY 15 6 ? ? ? A . n A 1 16 PHE 16 7 7 PHE PHE A . n A 1 17 THR 17 8 8 THR THR A . n A 1 18 ARG 18 9 9 ARG ARG A . n A 1 19 ILE 19 10 10 ILE ILE A . n A 1 20 ILE 20 11 11 ILE ILE A . n A 1 21 LYS 21 12 12 LYS LYS A . n A 1 22 ALA 22 13 13 ALA ALA A . n A 1 23 ALA 23 14 14 ALA ALA A . n A 1 24 GLY 24 15 15 GLY GLY A . n A 1 25 TYR 25 16 16 TYR TYR A . n A 1 26 SER 26 17 17 SER SER A . n A 1 27 TRP 27 18 18 TRP TRP A . n A 1 28 LYS 28 19 19 LYS LYS A . n A 1 29 GLY 29 20 20 GLY GLY A . n A 1 30 LEU 30 21 21 LEU LEU A . n A 1 31 ARG 31 22 22 ARG ARG A . n A 1 32 ALA 32 23 23 ALA ALA A . n A 1 33 ALA 33 24 24 ALA ALA A . n A 1 34 TRP 34 25 25 TRP TRP A . n A 1 35 ILE 35 26 26 ILE ILE A . n A 1 36 ASN 36 27 27 ASN ASN A . n A 1 37 GLU 37 28 28 GLU GLU A . n A 1 38 ALA 38 29 29 ALA ALA A . n A 1 39 ALA 39 30 30 ALA ALA A . n A 1 40 PHE 40 31 31 PHE PHE A . n A 1 41 ARG 41 32 32 ARG ARG A . n A 1 42 GLN 42 33 33 GLN GLN A . n A 1 43 GLU 43 34 34 GLU GLU A . n A 1 44 GLY 44 35 35 GLY GLY A . n A 1 45 VAL 45 36 36 VAL VAL A . n A 1 46 ALA 46 37 37 ALA ALA A . n A 1 47 VAL 47 38 38 VAL VAL A . n A 1 48 LEU 48 39 39 LEU LEU A . n A 1 49 LEU 49 40 40 LEU LEU A . n A 1 50 ALA 50 41 41 ALA ALA A . n A 1 51 VAL 51 42 42 VAL VAL A . n A 1 52 VAL 52 43 43 VAL VAL A . n A 1 53 ILE 53 44 44 ILE ILE A . n A 1 54 ALA 54 45 45 ALA ALA A . n A 1 55 CYS 55 46 46 CYS CYS A . n A 1 56 TRP 56 47 47 TRP TRP A . n A 1 57 LEU 57 48 48 LEU LEU A . n A 1 58 ASP 58 49 49 ASP ASP A . n A 1 59 VAL 59 50 50 VAL VAL A . n A 1 60 ASP 60 51 51 ASP ASP A . n A 1 61 ALA 61 52 52 ALA ALA A . n A 1 62 CYS 62 53 53 CYS CYS A . n A 1 63 THR 63 54 54 THR THR A . n A 1 64 ARG 64 55 55 ARG ARG A . n A 1 65 VAL 65 56 56 VAL VAL A . n A 1 66 LEU 66 57 57 LEU LEU A . n A 1 67 LEU 67 58 58 LEU LEU A . n A 1 68 ILE 68 59 59 ILE ILE A . n A 1 69 SER 69 60 60 SER SER A . n A 1 70 SER 70 61 61 SER SER A . n A 1 71 VAL 71 62 62 VAL VAL A . n A 1 72 MET 72 63 63 MET MET A . n A 1 73 LEU 73 64 64 LEU LEU A . n A 1 74 VAL 74 65 65 VAL VAL A . n A 1 75 MET 75 66 66 MET MET A . n A 1 76 ILE 76 67 67 ILE ILE A . n A 1 77 VAL 77 68 68 VAL VAL A . n A 1 78 GLU 78 69 69 GLU GLU A . n A 1 79 LEU 79 70 70 LEU LEU A . n A 1 80 LEU 80 71 71 LEU LEU A . n A 1 81 ASN 81 72 72 ASN ASN A . n A 1 82 SER 82 73 73 SER SER A . n A 1 83 ALA 83 74 74 ALA ALA A . n A 1 84 ILE 84 75 75 ILE ILE A . n A 1 85 GLU 85 76 76 GLU GLU A . n A 1 86 ALA 86 77 77 ALA ALA A . n A 1 87 VAL 87 78 78 VAL VAL A . n A 1 88 VAL 88 79 79 VAL VAL A . n A 1 89 ASP 89 80 80 ASP ASP A . n A 1 90 ARG 90 81 81 ARG ARG A . n A 1 91 ILE 91 82 82 ILE ILE A . n A 1 92 GLY 92 83 83 GLY GLY A . n A 1 93 SER 93 84 84 SER SER A . n A 1 94 GLU 94 85 85 GLU GLU A . n A 1 95 TYR 95 86 86 TYR TYR A . n A 1 96 HIS 96 87 87 HIS HIS A . n A 1 97 GLU 97 88 88 GLU GLU A . n A 1 98 LEU 98 89 89 LEU LEU A . n A 1 99 SER 99 90 90 SER SER A . n A 1 100 GLY 100 91 91 GLY GLY A . n A 1 101 ARG 101 92 92 ARG ARG A . n A 1 102 ALA 102 93 93 ALA ALA A . n A 1 103 LYS 103 94 94 LYS LYS A . n A 1 104 ASP 104 95 95 ASP ASP A . n A 1 105 LEU 105 96 96 LEU LEU A . n A 1 106 GLY 106 97 97 GLY GLY A . n A 1 107 SER 107 98 98 SER SER A . n A 1 108 ALA 108 99 99 ALA ALA A . n A 1 109 ALA 109 100 100 ALA ALA A . n A 1 110 VAL 110 101 101 VAL VAL A . n A 1 111 LEU 111 102 102 LEU LEU A . n A 1 112 ILE 112 103 103 ILE ILE A . n A 1 113 ALA 113 104 104 ALA ALA A . n A 1 114 ILE 114 105 105 ILE ILE A . n A 1 115 ILE 115 106 106 ILE ILE A . n A 1 116 ASP 116 107 107 ASP ASP A . n A 1 117 ALA 117 108 108 ALA ALA A . n A 1 118 VAL 118 109 109 VAL VAL A . n A 1 119 ILE 119 110 110 ILE ILE A . n A 1 120 THR 120 111 111 THR THR A . n A 1 121 TRP 121 112 112 TRP TRP A . n A 1 122 CYS 122 113 113 CYS CYS A . n A 1 123 ILE 123 114 114 ILE ILE A . n A 1 124 LEU 124 115 115 LEU LEU A . n A 1 125 LEU 125 116 116 LEU LEU A . n A 1 126 TRP 126 117 117 TRP TRP A . n A 1 127 SER 127 118 118 SER SER A . n A 1 128 HIS 128 119 119 HIS HIS A . n A 1 129 PHE 129 120 120 PHE PHE A . n A 1 130 GLY 130 121 ? ? ? A . n B 1 1 GLY 1 -8 ? ? ? B . n B 1 2 HIS 2 -7 ? ? ? B . n B 1 3 HIS 3 -6 ? ? ? B . n B 1 4 HIS 4 -5 ? ? ? B . n B 1 5 HIS 5 -4 ? ? ? B . n B 1 6 HIS 6 -3 ? ? ? B . n B 1 7 HIS 7 -2 ? ? ? B . n B 1 8 GLU 8 -1 ? ? ? B . n B 1 9 LEU 9 0 ? ? ? B . n B 1 10 ALA 10 1 ? ? ? B . n B 1 11 ASN 11 2 ? ? ? B . n B 1 12 ASN 12 3 ? ? ? B . n B 1 13 THR 13 4 ? ? ? B . n B 1 14 THR 14 5 ? ? ? B . n B 1 15 GLY 15 6 ? ? ? B . n B 1 16 PHE 16 7 7 PHE PHE B . n B 1 17 THR 17 8 8 THR THR B . n B 1 18 ARG 18 9 9 ARG ARG B . n B 1 19 ILE 19 10 10 ILE ILE B . n B 1 20 ILE 20 11 11 ILE ILE B . n B 1 21 LYS 21 12 12 LYS LYS B . n B 1 22 ALA 22 13 13 ALA ALA B . n B 1 23 ALA 23 14 14 ALA ALA B . n B 1 24 GLY 24 15 15 GLY GLY B . n B 1 25 TYR 25 16 16 TYR TYR B . n B 1 26 SER 26 17 17 SER SER B . n B 1 27 TRP 27 18 18 TRP TRP B . n B 1 28 LYS 28 19 19 LYS LYS B . n B 1 29 GLY 29 20 20 GLY GLY B . n B 1 30 LEU 30 21 21 LEU LEU B . n B 1 31 ARG 31 22 22 ARG ARG B . n B 1 32 ALA 32 23 23 ALA ALA B . n B 1 33 ALA 33 24 24 ALA ALA B . n B 1 34 TRP 34 25 25 TRP TRP B . n B 1 35 ILE 35 26 26 ILE ILE B . n B 1 36 ASN 36 27 27 ASN ASN B . n B 1 37 GLU 37 28 28 GLU GLU B . n B 1 38 ALA 38 29 29 ALA ALA B . n B 1 39 ALA 39 30 30 ALA ALA B . n B 1 40 PHE 40 31 31 PHE PHE B . n B 1 41 ARG 41 32 32 ARG ARG B . n B 1 42 GLN 42 33 33 GLN GLN B . n B 1 43 GLU 43 34 34 GLU GLU B . n B 1 44 GLY 44 35 35 GLY GLY B . n B 1 45 VAL 45 36 36 VAL VAL B . n B 1 46 ALA 46 37 37 ALA ALA B . n B 1 47 VAL 47 38 38 VAL VAL B . n B 1 48 LEU 48 39 39 LEU LEU B . n B 1 49 LEU 49 40 40 LEU LEU B . n B 1 50 ALA 50 41 41 ALA ALA B . n B 1 51 VAL 51 42 42 VAL VAL B . n B 1 52 VAL 52 43 43 VAL VAL B . n B 1 53 ILE 53 44 44 ILE ILE B . n B 1 54 ALA 54 45 45 ALA ALA B . n B 1 55 CYS 55 46 46 CYS CYS B . n B 1 56 TRP 56 47 47 TRP TRP B . n B 1 57 LEU 57 48 48 LEU LEU B . n B 1 58 ASP 58 49 49 ASP ASP B . n B 1 59 VAL 59 50 50 VAL VAL B . n B 1 60 ASP 60 51 51 ASP ASP B . n B 1 61 ALA 61 52 52 ALA ALA B . n B 1 62 CYS 62 53 53 CYS CYS B . n B 1 63 THR 63 54 54 THR THR B . n B 1 64 ARG 64 55 55 ARG ARG B . n B 1 65 VAL 65 56 56 VAL VAL B . n B 1 66 LEU 66 57 57 LEU LEU B . n B 1 67 LEU 67 58 58 LEU LEU B . n B 1 68 ILE 68 59 59 ILE ILE B . n B 1 69 SER 69 60 60 SER SER B . n B 1 70 SER 70 61 61 SER SER B . n B 1 71 VAL 71 62 62 VAL VAL B . n B 1 72 MET 72 63 63 MET MET B . n B 1 73 LEU 73 64 64 LEU LEU B . n B 1 74 VAL 74 65 65 VAL VAL B . n B 1 75 MET 75 66 66 MET MET B . n B 1 76 ILE 76 67 67 ILE ILE B . n B 1 77 VAL 77 68 68 VAL VAL B . n B 1 78 GLU 78 69 69 GLU GLU B . n B 1 79 LEU 79 70 70 LEU LEU B . n B 1 80 LEU 80 71 71 LEU LEU B . n B 1 81 ASN 81 72 72 ASN ASN B . n B 1 82 SER 82 73 73 SER SER B . n B 1 83 ALA 83 74 74 ALA ALA B . n B 1 84 ILE 84 75 75 ILE ILE B . n B 1 85 GLU 85 76 76 GLU GLU B . n B 1 86 ALA 86 77 77 ALA ALA B . n B 1 87 VAL 87 78 78 VAL VAL B . n B 1 88 VAL 88 79 79 VAL VAL B . n B 1 89 ASP 89 80 80 ASP ASP B . n B 1 90 ARG 90 81 81 ARG ARG B . n B 1 91 ILE 91 82 82 ILE ILE B . n B 1 92 GLY 92 83 83 GLY GLY B . n B 1 93 SER 93 84 84 SER SER B . n B 1 94 GLU 94 85 85 GLU GLU B . n B 1 95 TYR 95 86 86 TYR TYR B . n B 1 96 HIS 96 87 87 HIS HIS B . n B 1 97 GLU 97 88 88 GLU GLU B . n B 1 98 LEU 98 89 89 LEU LEU B . n B 1 99 SER 99 90 90 SER SER B . n B 1 100 GLY 100 91 91 GLY GLY B . n B 1 101 ARG 101 92 92 ARG ARG B . n B 1 102 ALA 102 93 93 ALA ALA B . n B 1 103 LYS 103 94 94 LYS LYS B . n B 1 104 ASP 104 95 95 ASP ASP B . n B 1 105 LEU 105 96 96 LEU LEU B . n B 1 106 GLY 106 97 97 GLY GLY B . n B 1 107 SER 107 98 98 SER SER B . n B 1 108 ALA 108 99 99 ALA ALA B . n B 1 109 ALA 109 100 100 ALA ALA B . n B 1 110 VAL 110 101 101 VAL VAL B . n B 1 111 LEU 111 102 102 LEU LEU B . n B 1 112 ILE 112 103 103 ILE ILE B . n B 1 113 ALA 113 104 104 ALA ALA B . n B 1 114 ILE 114 105 105 ILE ILE B . n B 1 115 ILE 115 106 106 ILE ILE B . n B 1 116 ASP 116 107 107 ASP ASP B . n B 1 117 ALA 117 108 108 ALA ALA B . n B 1 118 VAL 118 109 109 VAL VAL B . n B 1 119 ILE 119 110 110 ILE ILE B . n B 1 120 THR 120 111 111 THR THR B . n B 1 121 TRP 121 112 112 TRP TRP B . n B 1 122 CYS 122 113 113 CYS CYS B . n B 1 123 ILE 123 114 114 ILE ILE B . n B 1 124 LEU 124 115 115 LEU LEU B . n B 1 125 LEU 125 116 116 LEU LEU B . n B 1 126 TRP 126 117 117 TRP TRP B . n B 1 127 SER 127 118 118 SER SER B . n B 1 128 HIS 128 119 119 HIS HIS B . n B 1 129 PHE 129 120 120 PHE PHE B . n B 1 130 GLY 130 121 ? ? ? B . n C 1 1 GLY 1 -8 ? ? ? C . n C 1 2 HIS 2 -7 ? ? ? C . n C 1 3 HIS 3 -6 ? ? ? C . n C 1 4 HIS 4 -5 ? ? ? C . n C 1 5 HIS 5 -4 ? ? ? C . n C 1 6 HIS 6 -3 ? ? ? C . n C 1 7 HIS 7 -2 ? ? ? C . n C 1 8 GLU 8 -1 ? ? ? C . n C 1 9 LEU 9 0 ? ? ? C . n C 1 10 ALA 10 1 ? ? ? C . n C 1 11 ASN 11 2 ? ? ? C . n C 1 12 ASN 12 3 ? ? ? C . n C 1 13 THR 13 4 ? ? ? C . n C 1 14 THR 14 5 ? ? ? C . n C 1 15 GLY 15 6 ? ? ? C . n C 1 16 PHE 16 7 ? ? ? C . n C 1 17 THR 17 8 ? ? ? C . n C 1 18 ARG 18 9 ? ? ? C . n C 1 19 ILE 19 10 ? ? ? C . n C 1 20 ILE 20 11 ? ? ? C . n C 1 21 LYS 21 12 ? ? ? C . n C 1 22 ALA 22 13 ? ? ? C . n C 1 23 ALA 23 14 ? ? ? C . n C 1 24 GLY 24 15 ? ? ? C . n C 1 25 TYR 25 16 16 TYR TYR C . n C 1 26 SER 26 17 17 SER SER C . n C 1 27 TRP 27 18 18 TRP TRP C . n C 1 28 LYS 28 19 19 LYS LYS C . n C 1 29 GLY 29 20 20 GLY GLY C . n C 1 30 LEU 30 21 21 LEU LEU C . n C 1 31 ARG 31 22 22 ARG ARG C . n C 1 32 ALA 32 23 23 ALA ALA C . n C 1 33 ALA 33 24 24 ALA ALA C . n C 1 34 TRP 34 25 25 TRP TRP C . n C 1 35 ILE 35 26 26 ILE ILE C . n C 1 36 ASN 36 27 27 ASN ASN C . n C 1 37 GLU 37 28 28 GLU GLU C . n C 1 38 ALA 38 29 29 ALA ALA C . n C 1 39 ALA 39 30 30 ALA ALA C . n C 1 40 PHE 40 31 31 PHE PHE C . n C 1 41 ARG 41 32 32 ARG ARG C . n C 1 42 GLN 42 33 33 GLN GLN C . n C 1 43 GLU 43 34 34 GLU GLU C . n C 1 44 GLY 44 35 35 GLY GLY C . n C 1 45 VAL 45 36 36 VAL VAL C . n C 1 46 ALA 46 37 37 ALA ALA C . n C 1 47 VAL 47 38 38 VAL VAL C . n C 1 48 LEU 48 39 39 LEU LEU C . n C 1 49 LEU 49 40 40 LEU LEU C . n C 1 50 ALA 50 41 41 ALA ALA C . n C 1 51 VAL 51 42 42 VAL VAL C . n C 1 52 VAL 52 43 43 VAL VAL C . n C 1 53 ILE 53 44 44 ILE ILE C . n C 1 54 ALA 54 45 45 ALA ALA C . n C 1 55 CYS 55 46 46 CYS CYS C . n C 1 56 TRP 56 47 47 TRP TRP C . n C 1 57 LEU 57 48 48 LEU LEU C . n C 1 58 ASP 58 49 49 ASP ASP C . n C 1 59 VAL 59 50 50 VAL VAL C . n C 1 60 ASP 60 51 51 ASP ASP C . n C 1 61 ALA 61 52 52 ALA ALA C . n C 1 62 CYS 62 53 53 CYS CYS C . n C 1 63 THR 63 54 54 THR THR C . n C 1 64 ARG 64 55 55 ARG ARG C . n C 1 65 VAL 65 56 56 VAL VAL C . n C 1 66 LEU 66 57 57 LEU LEU C . n C 1 67 LEU 67 58 58 LEU LEU C . n C 1 68 ILE 68 59 59 ILE ILE C . n C 1 69 SER 69 60 60 SER SER C . n C 1 70 SER 70 61 61 SER SER C . n C 1 71 VAL 71 62 62 VAL VAL C . n C 1 72 MET 72 63 63 MET MET C . n C 1 73 LEU 73 64 64 LEU LEU C . n C 1 74 VAL 74 65 65 VAL VAL C . n C 1 75 MET 75 66 66 MET MET C . n C 1 76 ILE 76 67 67 ILE ILE C . n C 1 77 VAL 77 68 68 VAL VAL C . n C 1 78 GLU 78 69 69 GLU GLU C . n C 1 79 LEU 79 70 70 LEU LEU C . n C 1 80 LEU 80 71 71 LEU LEU C . n C 1 81 ASN 81 72 72 ASN ASN C . n C 1 82 SER 82 73 73 SER SER C . n C 1 83 ALA 83 74 74 ALA ALA C . n C 1 84 ILE 84 75 75 ILE ILE C . n C 1 85 GLU 85 76 76 GLU GLU C . n C 1 86 ALA 86 77 77 ALA ALA C . n C 1 87 VAL 87 78 78 VAL VAL C . n C 1 88 VAL 88 79 79 VAL VAL C . n C 1 89 ASP 89 80 80 ASP ASP C . n C 1 90 ARG 90 81 81 ARG ARG C . n C 1 91 ILE 91 82 82 ILE ILE C . n C 1 92 GLY 92 83 83 GLY GLY C . n C 1 93 SER 93 84 84 SER SER C . n C 1 94 GLU 94 85 85 GLU GLU C . n C 1 95 TYR 95 86 86 TYR TYR C . n C 1 96 HIS 96 87 87 HIS HIS C . n C 1 97 GLU 97 88 88 GLU GLU C . n C 1 98 LEU 98 89 89 LEU LEU C . n C 1 99 SER 99 90 90 SER SER C . n C 1 100 GLY 100 91 91 GLY GLY C . n C 1 101 ARG 101 92 92 ARG ARG C . n C 1 102 ALA 102 93 93 ALA ALA C . n C 1 103 LYS 103 94 94 LYS LYS C . n C 1 104 ASP 104 95 95 ASP ASP C . n C 1 105 LEU 105 96 96 LEU LEU C . n C 1 106 GLY 106 97 97 GLY GLY C . n C 1 107 SER 107 98 98 SER SER C . n C 1 108 ALA 108 99 99 ALA ALA C . n C 1 109 ALA 109 100 100 ALA ALA C . n C 1 110 VAL 110 101 101 VAL VAL C . n C 1 111 LEU 111 102 102 LEU LEU C . n C 1 112 ILE 112 103 103 ILE ILE C . n C 1 113 ALA 113 104 104 ALA ALA C . n C 1 114 ILE 114 105 105 ILE ILE C . n C 1 115 ILE 115 106 106 ILE ILE C . n C 1 116 ASP 116 107 107 ASP ASP C . n C 1 117 ALA 117 108 108 ALA ALA C . n C 1 118 VAL 118 109 109 VAL VAL C . n C 1 119 ILE 119 110 110 ILE ILE C . n C 1 120 THR 120 111 111 THR THR C . n C 1 121 TRP 121 112 112 TRP TRP C . n C 1 122 CYS 122 113 113 CYS CYS C . n C 1 123 ILE 123 114 114 ILE ILE C . n C 1 124 LEU 124 115 115 LEU LEU C . n C 1 125 LEU 125 116 116 LEU LEU C . n C 1 126 TRP 126 117 117 TRP TRP C . n C 1 127 SER 127 118 118 SER SER C . n C 1 128 HIS 128 119 119 HIS HIS C . n C 1 129 PHE 129 120 ? ? ? C . n C 1 130 GLY 130 121 ? ? ? C . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 OLC 1 1121 1121 OLC OLC B . E 2 OLC 1 1122 1122 OLC OLC B . F 3 ZN 1 1120 1120 ZN ZN C . G 3 ZN 1 1121 1121 ZN ZN C . H 4 ACP 1 1122 1122 ACP ACP C . I 5 HOH 1 2001 2001 HOH HOH A . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal PHENIX refinement '(PHENIX.REFINE)' ? 1 XDS 'data reduction' . ? 2 SCALA 'data scaling' . ? 3 PHASER phasing . ? 4 # _cell.entry_id 4CK0 _cell.length_a 72.820 _cell.length_b 72.820 _cell.length_c 195.670 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 18 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4CK0 _symmetry.space_group_name_H-M 'P 31 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 # _exptl.entry_id 4CK0 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 3.57 _exptl_crystal.density_percent_sol 65.53 _exptl_crystal.description NONE # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'LIPIDIC CUBIC PHASE' _exptl_crystal_grow.temp 277 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 5.6 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details ;7-9%(V/V) 2-METHYL-2-4-PENTANEDIOL, 0.1 M SODIUM CHLORIDE, 0.1 M LITHIUM NITRATE, 0.1 M SODIUM CITRATE PH 5.6. CRYSTALLIZED USING THE IN MESO (LIPIDIC CUBIC PHASE) METHOD AT 4 DEGREE CELSIUS WITH THE MONOOLEIN AS THE HOSTING LIPID. CRYSTALS WERE SOAKED AT 4 DEGREE CELSIUS WITH 10 MM AMPPCP AND 60 MM MAGNESIUM IN THE CRYSTALLIZATION CONDITION FOR 2 H BEFORE HARVESTING. ; # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type MARRESEARCH _diffrn_detector.pdbx_collection_date 2012-12-01 _diffrn_detector.details 'K-B PAIR OF BIOMORPH MIRRORS' # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'SI(111) DOUBLE CRYSTAL CRYO-COOLED' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.03320 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 23-ID-B' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 23-ID-B _diffrn_source.pdbx_wavelength 1.03320 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 4CK0 _reflns.observed_criterion_sigma_I -3.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 60.02 _reflns.d_resolution_high 2.92 _reflns.number_obs 13563 _reflns.number_all ? _reflns.percent_possible_obs 99.1 _reflns.pdbx_Rmerge_I_obs 0.10 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 9.90 _reflns.B_iso_Wilson_estimate 76.89 _reflns.pdbx_redundancy 4.8 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 2.92 _reflns_shell.d_res_low 3.00 _reflns_shell.percent_possible_all 99.5 _reflns_shell.Rmerge_I_obs 0.76 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 2.50 _reflns_shell.pdbx_redundancy 4.9 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 4CK0 _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 13519 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.34 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 53.006 _refine.ls_d_res_high 2.924 _refine.ls_percent_reflns_obs 99.02 _refine.ls_R_factor_obs 0.2495 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.2479 _refine.ls_R_factor_R_free 0.2809 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.8 _refine.ls_number_reflns_R_free 644 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 86.15 _refine.aniso_B[1][1] 12.1579 _refine.aniso_B[2][2] 12.1579 _refine.aniso_B[3][3] -24.3158 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] 0.0000 _refine.aniso_B[2][3] 0.0000 _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol 0.311 _refine.solvent_model_param_bsol 63.739 _refine.pdbx_solvent_vdw_probe_radii 1.10 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.86 _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model 'PDB ENTRY 3ZE3' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.37 _refine.pdbx_overall_phase_error 27.35 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2555 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 83 _refine_hist.number_atoms_solvent 1 _refine_hist.number_atoms_total 2639 _refine_hist.d_res_high 2.924 _refine_hist.d_res_low 53.006 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function f_bond_d 0.012 ? ? 2699 'X-RAY DIFFRACTION' ? f_angle_d 0.563 ? ? 3674 'X-RAY DIFFRACTION' ? f_dihedral_angle_d 10.559 ? ? 951 'X-RAY DIFFRACTION' ? f_chiral_restr 0.031 ? ? 448 'X-RAY DIFFRACTION' ? f_plane_restr 0.001 ? ? 443 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all 'X-RAY DIFFRACTION' . 2.9238 3.1495 2511 0.2993 100.00 0.3431 . . 141 . . 'X-RAY DIFFRACTION' . 3.1495 3.4664 2541 0.2819 100.00 0.3407 . . 127 . . 'X-RAY DIFFRACTION' . 3.4664 3.9679 2572 0.2492 99.00 0.2748 . . 103 . . 'X-RAY DIFFRACTION' . 3.9679 4.9985 2586 0.2159 99.00 0.2622 . . 129 . . 'X-RAY DIFFRACTION' . 4.9985 53.0148 2665 0.2530 97.00 0.2664 . . 144 . . # _database_PDB_matrix.entry_id 4CK0 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 4CK0 _struct.title 'Crystal structure of the integral membrane diacylglycerol kinase - form 2' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4CK0 _struct_keywords.pdbx_keywords TRANSFERASE _struct_keywords.text ;TRANSFERASE, BETA- GAMA-METHYLENEADENOSINE 5'-TRIPHOSPHATE, DGKA, IN MESO CRYSTALLISATION, LCP, LIPID CUBIC PHASE, LIPIDIC MESOPHASE, LIPID METABOLISM, MEMBRANE PROTEIN, MICROCRYSTAL, MONOACYLGLYCEROL, MONOOLEIN, 9.9 MAG, SOAKING, THERMOSTABLE MUTANT ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 1 ? D N N 2 ? E N N 2 ? F N N 3 ? G N N 3 ? H N N 4 ? I N N 5 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code KDGL_ECOLI _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_db_accession P0ABN1 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4CK0 A 10 ? 130 ? P0ABN1 2 ? 122 ? 1 121 2 1 4CK0 B 10 ? 130 ? P0ABN1 2 ? 122 ? 1 121 3 1 4CK0 C 10 ? 130 ? P0ABN1 2 ? 122 ? 1 121 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4CK0 GLY A 1 ? UNP P0ABN1 ? ? 'expression tag' -8 1 1 4CK0 HIS A 2 ? UNP P0ABN1 ? ? 'expression tag' -7 2 1 4CK0 HIS A 3 ? UNP P0ABN1 ? ? 'expression tag' -6 3 1 4CK0 HIS A 4 ? UNP P0ABN1 ? ? 'expression tag' -5 4 1 4CK0 HIS A 5 ? UNP P0ABN1 ? ? 'expression tag' -4 5 1 4CK0 HIS A 6 ? UNP P0ABN1 ? ? 'expression tag' -3 6 1 4CK0 HIS A 7 ? UNP P0ABN1 ? ? 'expression tag' -2 7 1 4CK0 GLU A 8 ? UNP P0ABN1 ? ? 'expression tag' -1 8 1 4CK0 LEU A 9 ? UNP P0ABN1 ? ? 'expression tag' 0 9 1 4CK0 CYS A 62 ? UNP P0ABN1 ILE 54 'engineered mutation' 53 10 1 4CK0 LEU A 79 ? UNP P0ABN1 ILE 71 'engineered mutation' 70 11 1 4CK0 LEU A 105 ? UNP P0ABN1 MET 97 'engineered mutation' 96 12 1 4CK0 ASP A 116 ? UNP P0ABN1 VAL 108 'engineered mutation' 107 13 2 4CK0 GLY B 1 ? UNP P0ABN1 ? ? 'expression tag' -8 14 2 4CK0 HIS B 2 ? UNP P0ABN1 ? ? 'expression tag' -7 15 2 4CK0 HIS B 3 ? UNP P0ABN1 ? ? 'expression tag' -6 16 2 4CK0 HIS B 4 ? UNP P0ABN1 ? ? 'expression tag' -5 17 2 4CK0 HIS B 5 ? UNP P0ABN1 ? ? 'expression tag' -4 18 2 4CK0 HIS B 6 ? UNP P0ABN1 ? ? 'expression tag' -3 19 2 4CK0 HIS B 7 ? UNP P0ABN1 ? ? 'expression tag' -2 20 2 4CK0 GLU B 8 ? UNP P0ABN1 ? ? 'expression tag' -1 21 2 4CK0 LEU B 9 ? UNP P0ABN1 ? ? 'expression tag' 0 22 2 4CK0 CYS B 62 ? UNP P0ABN1 ILE 54 'engineered mutation' 53 23 2 4CK0 LEU B 79 ? UNP P0ABN1 ILE 71 'engineered mutation' 70 24 2 4CK0 LEU B 105 ? UNP P0ABN1 MET 97 'engineered mutation' 96 25 2 4CK0 ASP B 116 ? UNP P0ABN1 VAL 108 'engineered mutation' 107 26 3 4CK0 GLY C 1 ? UNP P0ABN1 ? ? 'expression tag' -8 27 3 4CK0 HIS C 2 ? UNP P0ABN1 ? ? 'expression tag' -7 28 3 4CK0 HIS C 3 ? UNP P0ABN1 ? ? 'expression tag' -6 29 3 4CK0 HIS C 4 ? UNP P0ABN1 ? ? 'expression tag' -5 30 3 4CK0 HIS C 5 ? UNP P0ABN1 ? ? 'expression tag' -4 31 3 4CK0 HIS C 6 ? UNP P0ABN1 ? ? 'expression tag' -3 32 3 4CK0 HIS C 7 ? UNP P0ABN1 ? ? 'expression tag' -2 33 3 4CK0 GLU C 8 ? UNP P0ABN1 ? ? 'expression tag' -1 34 3 4CK0 LEU C 9 ? UNP P0ABN1 ? ? 'expression tag' 0 35 3 4CK0 CYS C 62 ? UNP P0ABN1 ILE 54 'engineered mutation' 53 36 3 4CK0 LEU C 79 ? UNP P0ABN1 ILE 71 'engineered mutation' 70 37 3 4CK0 LEU C 105 ? UNP P0ABN1 MET 97 'engineered mutation' 96 38 3 4CK0 ASP C 116 ? UNP P0ABN1 VAL 108 'engineered mutation' 107 39 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 9670 ? 1 MORE -168.6 ? 1 'SSA (A^2)' 15460 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 PHE A 16 ? GLU A 37 ? PHE A 7 GLU A 28 1 ? 22 HELX_P HELX_P2 2 GLU A 37 ? LEU A 57 ? GLU A 28 LEU A 48 1 ? 21 HELX_P HELX_P3 3 ASP A 60 ? HIS A 96 ? ASP A 51 HIS A 87 1 ? 37 HELX_P HELX_P4 4 GLY A 100 ? PHE A 129 ? GLY A 91 PHE A 120 1 ? 30 HELX_P HELX_P5 5 THR B 17 ? GLU B 37 ? THR B 8 GLU B 28 1 ? 21 HELX_P HELX_P6 6 GLU B 37 ? CYS B 55 ? GLU B 28 CYS B 46 1 ? 19 HELX_P HELX_P7 7 ASP B 60 ? TYR B 95 ? ASP B 51 TYR B 86 1 ? 36 HELX_P HELX_P8 8 GLY B 100 ? PHE B 129 ? GLY B 91 PHE B 120 1 ? 30 HELX_P HELX_P9 9 TYR C 25 ? GLU C 37 ? TYR C 16 GLU C 28 1 ? 13 HELX_P HELX_P10 10 ALA C 38 ? LEU C 57 ? ALA C 29 LEU C 48 1 ? 20 HELX_P HELX_P11 11 ASP C 60 ? GLY C 92 ? ASP C 51 GLY C 83 1 ? 33 HELX_P HELX_P12 12 HIS C 96 ? SER C 127 ? HIS C 87 SER C 118 1 ? 32 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? C GLU 37 OE2 ? ? ? 1_555 F ZN . ZN ? ? C GLU 28 C ZN 1120 1_555 ? ? ? ? ? ? ? 2.042 ? ? metalc2 metalc ? ? C GLU 85 OE1 ? ? ? 1_555 F ZN . ZN ? ? C GLU 76 C ZN 1120 1_555 ? ? ? ? ? ? ? 2.002 ? ? metalc3 metalc ? ? C GLU 85 OE2 ? ? ? 1_555 G ZN . ZN ? ? C GLU 76 C ZN 1121 1_555 ? ? ? ? ? ? ? 1.968 ? ? metalc4 metalc ? ? F ZN . ZN ? ? ? 1_555 H ACP . O1G ? ? C ZN 1120 C ACP 1122 1_555 ? ? ? ? ? ? ? 2.149 ? ? metalc5 metalc ? ? F ZN . ZN ? ? ? 1_555 H ACP . PG ? ? C ZN 1120 C ACP 1122 1_555 ? ? ? ? ? ? ? 2.428 ? ? metalc6 metalc ? ? F ZN . ZN ? ? ? 1_555 H ACP . O2G ? ? C ZN 1120 C ACP 1122 1_555 ? ? ? ? ? ? ? 2.028 ? ? metalc7 metalc ? ? F ZN . ZN ? ? ? 1_555 H ACP . O1B ? ? C ZN 1120 C ACP 1122 1_555 ? ? ? ? ? ? ? 2.455 ? ? metalc8 metalc ? ? G ZN . ZN ? ? ? 1_555 H ACP . O1A ? ? C ZN 1121 C ACP 1122 1_555 ? ? ? ? ? ? ? 2.066 ? ? metalc9 metalc ? ? G ZN . ZN ? ? ? 1_555 H ACP . O1B ? ? C ZN 1121 C ACP 1122 1_555 ? ? ? ? ? ? ? 2.401 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OE2 ? C GLU 37 ? C GLU 28 ? 1_555 ZN ? F ZN . ? C ZN 1120 ? 1_555 OE1 ? C GLU 85 ? C GLU 76 ? 1_555 103.4 ? 2 OE2 ? C GLU 37 ? C GLU 28 ? 1_555 ZN ? F ZN . ? C ZN 1120 ? 1_555 O1G ? H ACP . ? C ACP 1122 ? 1_555 93.8 ? 3 OE1 ? C GLU 85 ? C GLU 76 ? 1_555 ZN ? F ZN . ? C ZN 1120 ? 1_555 O1G ? H ACP . ? C ACP 1122 ? 1_555 116.9 ? 4 OE2 ? C GLU 37 ? C GLU 28 ? 1_555 ZN ? F ZN . ? C ZN 1120 ? 1_555 PG ? H ACP . ? C ACP 1122 ? 1_555 93.2 ? 5 OE1 ? C GLU 85 ? C GLU 76 ? 1_555 ZN ? F ZN . ? C ZN 1120 ? 1_555 PG ? H ACP . ? C ACP 1122 ? 1_555 151.3 ? 6 O1G ? H ACP . ? C ACP 1122 ? 1_555 ZN ? F ZN . ? C ZN 1120 ? 1_555 PG ? H ACP . ? C ACP 1122 ? 1_555 37.5 ? 7 OE2 ? C GLU 37 ? C GLU 28 ? 1_555 ZN ? F ZN . ? C ZN 1120 ? 1_555 O2G ? H ACP . ? C ACP 1122 ? 1_555 75.2 ? 8 OE1 ? C GLU 85 ? C GLU 76 ? 1_555 ZN ? F ZN . ? C ZN 1120 ? 1_555 O2G ? H ACP . ? C ACP 1122 ? 1_555 168.5 ? 9 O1G ? H ACP . ? C ACP 1122 ? 1_555 ZN ? F ZN . ? C ZN 1120 ? 1_555 O2G ? H ACP . ? C ACP 1122 ? 1_555 74.6 ? 10 PG ? H ACP . ? C ACP 1122 ? 1_555 ZN ? F ZN . ? C ZN 1120 ? 1_555 O2G ? H ACP . ? C ACP 1122 ? 1_555 39.3 ? 11 OE2 ? C GLU 37 ? C GLU 28 ? 1_555 ZN ? F ZN . ? C ZN 1120 ? 1_555 O1B ? H ACP . ? C ACP 1122 ? 1_555 144.5 ? 12 OE1 ? C GLU 85 ? C GLU 76 ? 1_555 ZN ? F ZN . ? C ZN 1120 ? 1_555 O1B ? H ACP . ? C ACP 1122 ? 1_555 93.4 ? 13 O1G ? H ACP . ? C ACP 1122 ? 1_555 ZN ? F ZN . ? C ZN 1120 ? 1_555 O1B ? H ACP . ? C ACP 1122 ? 1_555 106.2 ? 14 PG ? H ACP . ? C ACP 1122 ? 1_555 ZN ? F ZN . ? C ZN 1120 ? 1_555 O1B ? H ACP . ? C ACP 1122 ? 1_555 85.9 ? 15 O2G ? H ACP . ? C ACP 1122 ? 1_555 ZN ? F ZN . ? C ZN 1120 ? 1_555 O1B ? H ACP . ? C ACP 1122 ? 1_555 82.1 ? 16 OE2 ? C GLU 85 ? C GLU 76 ? 1_555 ZN ? G ZN . ? C ZN 1121 ? 1_555 O1A ? H ACP . ? C ACP 1122 ? 1_555 141.3 ? 17 OE2 ? C GLU 85 ? C GLU 76 ? 1_555 ZN ? G ZN . ? C ZN 1121 ? 1_555 O1B ? H ACP . ? C ACP 1122 ? 1_555 85.5 ? 18 O1A ? H ACP . ? C ACP 1122 ? 1_555 ZN ? G ZN . ? C ZN 1121 ? 1_555 O1B ? H ACP . ? C ACP 1122 ? 1_555 86.4 ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software C ZN 1120 ? 3 'BINDING SITE FOR RESIDUE ZN C 1120' AC2 Software C ZN 1121 ? 2 'BINDING SITE FOR RESIDUE ZN C 1121' AC3 Software C ACP 1122 ? 14 'BINDING SITE FOR RESIDUE ACP C 1122' AC4 Software B OLC 1121 ? 8 'BINDING SITE FOR RESIDUE OLC B 1121' AC5 Software B OLC 1122 ? 8 'BINDING SITE FOR RESIDUE OLC B 1122' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 3 GLU C 37 ? GLU C 28 . ? 1_555 ? 2 AC1 3 GLU C 85 ? GLU C 76 . ? 1_555 ? 3 AC1 3 ACP H . ? ACP C 1122 . ? 1_555 ? 4 AC2 2 GLU C 85 ? GLU C 76 . ? 1_555 ? 5 AC2 2 ACP H . ? ACP C 1122 . ? 1_555 ? 6 AC3 14 ARG B 18 ? ARG B 9 . ? 1_555 ? 7 AC3 14 LYS B 21 ? LYS B 12 . ? 1_555 ? 8 AC3 14 TYR B 25 ? TYR B 16 . ? 1_555 ? 9 AC3 14 GLU C 37 ? GLU C 28 . ? 1_555 ? 10 AC3 14 GLU C 85 ? GLU C 76 . ? 1_555 ? 11 AC3 14 GLU C 94 ? GLU C 85 . ? 1_555 ? 12 AC3 14 TYR C 95 ? TYR C 86 . ? 1_555 ? 13 AC3 14 HIS C 96 ? HIS C 87 . ? 1_555 ? 14 AC3 14 SER C 99 ? SER C 90 . ? 1_555 ? 15 AC3 14 GLY C 100 ? GLY C 91 . ? 1_555 ? 16 AC3 14 LYS C 103 ? LYS C 94 . ? 1_555 ? 17 AC3 14 ASP C 104 ? ASP C 95 . ? 1_555 ? 18 AC3 14 ZN F . ? ZN C 1120 . ? 1_555 ? 19 AC3 14 ZN G . ? ZN C 1121 . ? 1_555 ? 20 AC4 8 ALA A 22 ? ALA A 13 . ? 1_555 ? 21 AC4 8 ALA A 23 ? ALA A 14 . ? 1_555 ? 22 AC4 8 SER A 26 ? SER A 17 . ? 1_555 ? 23 AC4 8 ILE B 53 ? ILE B 44 . ? 1_555 ? 24 AC4 8 GLU B 78 ? GLU B 69 . ? 1_555 ? 25 AC4 8 ASN B 81 ? ASN B 72 . ? 1_555 ? 26 AC4 8 LEU B 111 ? LEU B 102 . ? 1_555 ? 27 AC4 8 ILE B 114 ? ILE B 105 . ? 1_555 ? 28 AC5 8 ILE A 19 ? ILE A 10 . ? 1_555 ? 29 AC5 8 TRP A 126 ? TRP A 117 . ? 4_655 ? 30 AC5 8 GLN B 42 ? GLN B 33 . ? 1_555 ? 31 AC5 8 GLU B 43 ? GLU B 34 . ? 1_555 ? 32 AC5 8 ALA B 46 ? ALA B 37 . ? 1_555 ? 33 AC5 8 VAL B 71 ? VAL B 62 . ? 1_555 ? 34 AC5 8 ILE B 114 ? ILE B 105 . ? 1_555 ? 35 AC5 8 CYS B 122 ? CYS B 113 . ? 1_555 ? # _pdbx_entry_details.entry_id 4CK0 _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ;THE CONSTRUCT CONTAINS AN N-TERMIANL HIS TAG 'GHHHHHHEL'. COMPARED TO THE WILDTYPE FORM, THE PROTEIN HAS FOUR MUTATIONS. THEY ARE I53C, I70L, M96L AND V107D. ; _pdbx_entry_details.has_ligand_of_interest ? # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY -8 ? A GLY 1 2 1 Y 1 A HIS -7 ? A HIS 2 3 1 Y 1 A HIS -6 ? A HIS 3 4 1 Y 1 A HIS -5 ? A HIS 4 5 1 Y 1 A HIS -4 ? A HIS 5 6 1 Y 1 A HIS -3 ? A HIS 6 7 1 Y 1 A HIS -2 ? A HIS 7 8 1 Y 1 A GLU -1 ? A GLU 8 9 1 Y 1 A LEU 0 ? A LEU 9 10 1 Y 1 A ALA 1 ? A ALA 10 11 1 Y 1 A ASN 2 ? A ASN 11 12 1 Y 1 A ASN 3 ? A ASN 12 13 1 Y 1 A THR 4 ? A THR 13 14 1 Y 1 A THR 5 ? A THR 14 15 1 Y 1 A GLY 6 ? A GLY 15 16 1 Y 1 A GLY 121 ? A GLY 130 17 1 Y 1 B GLY -8 ? B GLY 1 18 1 Y 1 B HIS -7 ? B HIS 2 19 1 Y 1 B HIS -6 ? B HIS 3 20 1 Y 1 B HIS -5 ? B HIS 4 21 1 Y 1 B HIS -4 ? B HIS 5 22 1 Y 1 B HIS -3 ? B HIS 6 23 1 Y 1 B HIS -2 ? B HIS 7 24 1 Y 1 B GLU -1 ? B GLU 8 25 1 Y 1 B LEU 0 ? B LEU 9 26 1 Y 1 B ALA 1 ? B ALA 10 27 1 Y 1 B ASN 2 ? B ASN 11 28 1 Y 1 B ASN 3 ? B ASN 12 29 1 Y 1 B THR 4 ? B THR 13 30 1 Y 1 B THR 5 ? B THR 14 31 1 Y 1 B GLY 6 ? B GLY 15 32 1 Y 1 B GLY 121 ? B GLY 130 33 1 Y 1 C GLY -8 ? C GLY 1 34 1 Y 1 C HIS -7 ? C HIS 2 35 1 Y 1 C HIS -6 ? C HIS 3 36 1 Y 1 C HIS -5 ? C HIS 4 37 1 Y 1 C HIS -4 ? C HIS 5 38 1 Y 1 C HIS -3 ? C HIS 6 39 1 Y 1 C HIS -2 ? C HIS 7 40 1 Y 1 C GLU -1 ? C GLU 8 41 1 Y 1 C LEU 0 ? C LEU 9 42 1 Y 1 C ALA 1 ? C ALA 10 43 1 Y 1 C ASN 2 ? C ASN 11 44 1 Y 1 C ASN 3 ? C ASN 12 45 1 Y 1 C THR 4 ? C THR 13 46 1 Y 1 C THR 5 ? C THR 14 47 1 Y 1 C GLY 6 ? C GLY 15 48 1 Y 1 C PHE 7 ? C PHE 16 49 1 Y 1 C THR 8 ? C THR 17 50 1 Y 1 C ARG 9 ? C ARG 18 51 1 Y 1 C ILE 10 ? C ILE 19 52 1 Y 1 C ILE 11 ? C ILE 20 53 1 Y 1 C LYS 12 ? C LYS 21 54 1 Y 1 C ALA 13 ? C ALA 22 55 1 Y 1 C ALA 14 ? C ALA 23 56 1 Y 1 C GLY 15 ? C GLY 24 57 1 Y 1 C PHE 120 ? C PHE 129 58 1 Y 1 C GLY 121 ? C GLY 130 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ACP PG P N N 1 ACP O1G O N N 2 ACP O2G O N N 3 ACP O3G O N N 4 ACP PB P N S 5 ACP O1B O N N 6 ACP O2B O N N 7 ACP C3B C N N 8 ACP PA P N R 9 ACP O1A O N N 10 ACP O2A O N N 11 ACP O3A O N N 12 ACP "O5'" O N N 13 ACP "C5'" C N N 14 ACP "C4'" C N R 15 ACP "O4'" O N N 16 ACP "C3'" C N S 17 ACP "O3'" O N N 18 ACP "C2'" C N R 19 ACP "O2'" O N N 20 ACP "C1'" C N R 21 ACP N9 N Y N 22 ACP C8 C Y N 23 ACP N7 N Y N 24 ACP C5 C Y N 25 ACP C6 C Y N 26 ACP N6 N N N 27 ACP N1 N Y N 28 ACP C2 C Y N 29 ACP N3 N Y N 30 ACP C4 C Y N 31 ACP HOG2 H N N 32 ACP HOG3 H N N 33 ACP HOB2 H N N 34 ACP H3B1 H N N 35 ACP H3B2 H N N 36 ACP HOA2 H N N 37 ACP "H5'1" H N N 38 ACP "H5'2" H N N 39 ACP "H4'" H N N 40 ACP "H3'" H N N 41 ACP "HO3'" H N N 42 ACP "H2'" H N N 43 ACP "HO2'" H N N 44 ACP "H1'" H N N 45 ACP H8 H N N 46 ACP HN61 H N N 47 ACP HN62 H N N 48 ACP H2 H N N 49 ALA N N N N 50 ALA CA C N S 51 ALA C C N N 52 ALA O O N N 53 ALA CB C N N 54 ALA OXT O N N 55 ALA H H N N 56 ALA H2 H N N 57 ALA HA H N N 58 ALA HB1 H N N 59 ALA HB2 H N N 60 ALA HB3 H N N 61 ALA HXT H N N 62 ARG N N N N 63 ARG CA C N S 64 ARG C C N N 65 ARG O O N N 66 ARG CB C N N 67 ARG CG C N N 68 ARG CD C N N 69 ARG NE N N N 70 ARG CZ C N N 71 ARG NH1 N N N 72 ARG NH2 N N N 73 ARG OXT O N N 74 ARG H H N N 75 ARG H2 H N N 76 ARG HA H N N 77 ARG HB2 H N N 78 ARG HB3 H N N 79 ARG HG2 H N N 80 ARG HG3 H N N 81 ARG HD2 H N N 82 ARG HD3 H N N 83 ARG HE H N N 84 ARG HH11 H N N 85 ARG HH12 H N N 86 ARG HH21 H N N 87 ARG HH22 H N N 88 ARG HXT H N N 89 ASN N N N N 90 ASN CA C N S 91 ASN C C N N 92 ASN O O N N 93 ASN CB C N N 94 ASN CG C N N 95 ASN OD1 O N N 96 ASN ND2 N N N 97 ASN OXT O N N 98 ASN H H N N 99 ASN H2 H N N 100 ASN HA H N N 101 ASN HB2 H N N 102 ASN HB3 H N N 103 ASN HD21 H N N 104 ASN HD22 H N N 105 ASN HXT H N N 106 ASP N N N N 107 ASP CA C N S 108 ASP C C N N 109 ASP O O N N 110 ASP CB C N N 111 ASP CG C N N 112 ASP OD1 O N N 113 ASP OD2 O N N 114 ASP OXT O N N 115 ASP H H N N 116 ASP H2 H N N 117 ASP HA H N N 118 ASP HB2 H N N 119 ASP HB3 H N N 120 ASP HD2 H N N 121 ASP HXT H N N 122 CYS N N N N 123 CYS CA C N R 124 CYS C C N N 125 CYS O O N N 126 CYS CB C N N 127 CYS SG S N N 128 CYS OXT O N N 129 CYS H H N N 130 CYS H2 H N N 131 CYS HA H N N 132 CYS HB2 H N N 133 CYS HB3 H N N 134 CYS HG H N N 135 CYS HXT H N N 136 GLN N N N N 137 GLN CA C N S 138 GLN C C N N 139 GLN O O N N 140 GLN CB C N N 141 GLN CG C N N 142 GLN CD C N N 143 GLN OE1 O N N 144 GLN NE2 N N N 145 GLN OXT O N N 146 GLN H H N N 147 GLN H2 H N N 148 GLN HA H N N 149 GLN HB2 H N N 150 GLN HB3 H N N 151 GLN HG2 H N N 152 GLN HG3 H N N 153 GLN HE21 H N N 154 GLN HE22 H N N 155 GLN HXT H N N 156 GLU N N N N 157 GLU CA C N S 158 GLU C C N N 159 GLU O O N N 160 GLU CB C N N 161 GLU CG C N N 162 GLU CD C N N 163 GLU OE1 O N N 164 GLU OE2 O N N 165 GLU OXT O N N 166 GLU H H N N 167 GLU H2 H N N 168 GLU HA H N N 169 GLU HB2 H N N 170 GLU HB3 H N N 171 GLU HG2 H N N 172 GLU HG3 H N N 173 GLU HE2 H N N 174 GLU HXT H N N 175 GLY N N N N 176 GLY CA C N N 177 GLY C C N N 178 GLY O O N N 179 GLY OXT O N N 180 GLY H H N N 181 GLY H2 H N N 182 GLY HA2 H N N 183 GLY HA3 H N N 184 GLY HXT H N N 185 HIS N N N N 186 HIS CA C N S 187 HIS C C N N 188 HIS O O N N 189 HIS CB C N N 190 HIS CG C Y N 191 HIS ND1 N Y N 192 HIS CD2 C Y N 193 HIS CE1 C Y N 194 HIS NE2 N Y N 195 HIS OXT O N N 196 HIS H H N N 197 HIS H2 H N N 198 HIS HA H N N 199 HIS HB2 H N N 200 HIS HB3 H N N 201 HIS HD1 H N N 202 HIS HD2 H N N 203 HIS HE1 H N N 204 HIS HE2 H N N 205 HIS HXT H N N 206 HOH O O N N 207 HOH H1 H N N 208 HOH H2 H N N 209 ILE N N N N 210 ILE CA C N S 211 ILE C C N N 212 ILE O O N N 213 ILE CB C N S 214 ILE CG1 C N N 215 ILE CG2 C N N 216 ILE CD1 C N N 217 ILE OXT O N N 218 ILE H H N N 219 ILE H2 H N N 220 ILE HA H N N 221 ILE HB H N N 222 ILE HG12 H N N 223 ILE HG13 H N N 224 ILE HG21 H N N 225 ILE HG22 H N N 226 ILE HG23 H N N 227 ILE HD11 H N N 228 ILE HD12 H N N 229 ILE HD13 H N N 230 ILE HXT H N N 231 LEU N N N N 232 LEU CA C N S 233 LEU C C N N 234 LEU O O N N 235 LEU CB C N N 236 LEU CG C N N 237 LEU CD1 C N N 238 LEU CD2 C N N 239 LEU OXT O N N 240 LEU H H N N 241 LEU H2 H N N 242 LEU HA H N N 243 LEU HB2 H N N 244 LEU HB3 H N N 245 LEU HG H N N 246 LEU HD11 H N N 247 LEU HD12 H N N 248 LEU HD13 H N N 249 LEU HD21 H N N 250 LEU HD22 H N N 251 LEU HD23 H N N 252 LEU HXT H N N 253 LYS N N N N 254 LYS CA C N S 255 LYS C C N N 256 LYS O O N N 257 LYS CB C N N 258 LYS CG C N N 259 LYS CD C N N 260 LYS CE C N N 261 LYS NZ N N N 262 LYS OXT O N N 263 LYS H H N N 264 LYS H2 H N N 265 LYS HA H N N 266 LYS HB2 H N N 267 LYS HB3 H N N 268 LYS HG2 H N N 269 LYS HG3 H N N 270 LYS HD2 H N N 271 LYS HD3 H N N 272 LYS HE2 H N N 273 LYS HE3 H N N 274 LYS HZ1 H N N 275 LYS HZ2 H N N 276 LYS HZ3 H N N 277 LYS HXT H N N 278 MET N N N N 279 MET CA C N S 280 MET C C N N 281 MET O O N N 282 MET CB C N N 283 MET CG C N N 284 MET SD S N N 285 MET CE C N N 286 MET OXT O N N 287 MET H H N N 288 MET H2 H N N 289 MET HA H N N 290 MET HB2 H N N 291 MET HB3 H N N 292 MET HG2 H N N 293 MET HG3 H N N 294 MET HE1 H N N 295 MET HE2 H N N 296 MET HE3 H N N 297 MET HXT H N N 298 OLC C18 C N N 299 OLC C10 C N N 300 OLC C9 C N N 301 OLC C17 C N N 302 OLC C11 C N N 303 OLC C8 C N N 304 OLC C24 C N N 305 OLC C16 C N N 306 OLC C12 C N N 307 OLC C7 C N N 308 OLC C15 C N N 309 OLC C13 C N N 310 OLC C6 C N N 311 OLC C14 C N N 312 OLC C5 C N N 313 OLC C4 C N N 314 OLC C3 C N N 315 OLC C2 C N N 316 OLC C21 C N N 317 OLC C1 C N N 318 OLC C22 C N R 319 OLC O19 O N N 320 OLC O25 O N N 321 OLC O23 O N N 322 OLC O20 O N N 323 OLC H18 H N N 324 OLC H18A H N N 325 OLC H18B H N N 326 OLC H10 H N N 327 OLC H9 H N N 328 OLC H17 H N N 329 OLC H17A H N N 330 OLC H11 H N N 331 OLC H11A H N N 332 OLC H8 H N N 333 OLC H8A H N N 334 OLC H24 H N N 335 OLC H24A H N N 336 OLC H16 H N N 337 OLC H16A H N N 338 OLC H12 H N N 339 OLC H12A H N N 340 OLC H7 H N N 341 OLC H7A H N N 342 OLC H15 H N N 343 OLC H15A H N N 344 OLC H13 H N N 345 OLC H13A H N N 346 OLC H6 H N N 347 OLC H6A H N N 348 OLC H14 H N N 349 OLC H14A H N N 350 OLC H5 H N N 351 OLC H5A H N N 352 OLC H4 H N N 353 OLC H4A H N N 354 OLC H3 H N N 355 OLC H3A H N N 356 OLC H2 H N N 357 OLC H2A H N N 358 OLC H21 H N N 359 OLC H21A H N N 360 OLC H22 H N N 361 OLC HO25 H N N 362 OLC HO23 H N N 363 PHE N N N N 364 PHE CA C N S 365 PHE C C N N 366 PHE O O N N 367 PHE CB C N N 368 PHE CG C Y N 369 PHE CD1 C Y N 370 PHE CD2 C Y N 371 PHE CE1 C Y N 372 PHE CE2 C Y N 373 PHE CZ C Y N 374 PHE OXT O N N 375 PHE H H N N 376 PHE H2 H N N 377 PHE HA H N N 378 PHE HB2 H N N 379 PHE HB3 H N N 380 PHE HD1 H N N 381 PHE HD2 H N N 382 PHE HE1 H N N 383 PHE HE2 H N N 384 PHE HZ H N N 385 PHE HXT H N N 386 SER N N N N 387 SER CA C N S 388 SER C C N N 389 SER O O N N 390 SER CB C N N 391 SER OG O N N 392 SER OXT O N N 393 SER H H N N 394 SER H2 H N N 395 SER HA H N N 396 SER HB2 H N N 397 SER HB3 H N N 398 SER HG H N N 399 SER HXT H N N 400 THR N N N N 401 THR CA C N S 402 THR C C N N 403 THR O O N N 404 THR CB C N R 405 THR OG1 O N N 406 THR CG2 C N N 407 THR OXT O N N 408 THR H H N N 409 THR H2 H N N 410 THR HA H N N 411 THR HB H N N 412 THR HG1 H N N 413 THR HG21 H N N 414 THR HG22 H N N 415 THR HG23 H N N 416 THR HXT H N N 417 TRP N N N N 418 TRP CA C N S 419 TRP C C N N 420 TRP O O N N 421 TRP CB C N N 422 TRP CG C Y N 423 TRP CD1 C Y N 424 TRP CD2 C Y N 425 TRP NE1 N Y N 426 TRP CE2 C Y N 427 TRP CE3 C Y N 428 TRP CZ2 C Y N 429 TRP CZ3 C Y N 430 TRP CH2 C Y N 431 TRP OXT O N N 432 TRP H H N N 433 TRP H2 H N N 434 TRP HA H N N 435 TRP HB2 H N N 436 TRP HB3 H N N 437 TRP HD1 H N N 438 TRP HE1 H N N 439 TRP HE3 H N N 440 TRP HZ2 H N N 441 TRP HZ3 H N N 442 TRP HH2 H N N 443 TRP HXT H N N 444 TYR N N N N 445 TYR CA C N S 446 TYR C C N N 447 TYR O O N N 448 TYR CB C N N 449 TYR CG C Y N 450 TYR CD1 C Y N 451 TYR CD2 C Y N 452 TYR CE1 C Y N 453 TYR CE2 C Y N 454 TYR CZ C Y N 455 TYR OH O N N 456 TYR OXT O N N 457 TYR H H N N 458 TYR H2 H N N 459 TYR HA H N N 460 TYR HB2 H N N 461 TYR HB3 H N N 462 TYR HD1 H N N 463 TYR HD2 H N N 464 TYR HE1 H N N 465 TYR HE2 H N N 466 TYR HH H N N 467 TYR HXT H N N 468 VAL N N N N 469 VAL CA C N S 470 VAL C C N N 471 VAL O O N N 472 VAL CB C N N 473 VAL CG1 C N N 474 VAL CG2 C N N 475 VAL OXT O N N 476 VAL H H N N 477 VAL H2 H N N 478 VAL HA H N N 479 VAL HB H N N 480 VAL HG11 H N N 481 VAL HG12 H N N 482 VAL HG13 H N N 483 VAL HG21 H N N 484 VAL HG22 H N N 485 VAL HG23 H N N 486 VAL HXT H N N 487 ZN ZN ZN N N 488 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ACP PG O1G doub N N 1 ACP PG O2G sing N N 2 ACP PG O3G sing N N 3 ACP PG C3B sing N N 4 ACP O2G HOG2 sing N N 5 ACP O3G HOG3 sing N N 6 ACP PB O1B doub N N 7 ACP PB O2B sing N N 8 ACP PB C3B sing N N 9 ACP PB O3A sing N N 10 ACP O2B HOB2 sing N N 11 ACP C3B H3B1 sing N N 12 ACP C3B H3B2 sing N N 13 ACP PA O1A doub N N 14 ACP PA O2A sing N N 15 ACP PA O3A sing N N 16 ACP PA "O5'" sing N N 17 ACP O2A HOA2 sing N N 18 ACP "O5'" "C5'" sing N N 19 ACP "C5'" "C4'" sing N N 20 ACP "C5'" "H5'1" sing N N 21 ACP "C5'" "H5'2" sing N N 22 ACP "C4'" "O4'" sing N N 23 ACP "C4'" "C3'" sing N N 24 ACP "C4'" "H4'" sing N N 25 ACP "O4'" "C1'" sing N N 26 ACP "C3'" "O3'" sing N N 27 ACP "C3'" "C2'" sing N N 28 ACP "C3'" "H3'" sing N N 29 ACP "O3'" "HO3'" sing N N 30 ACP "C2'" "O2'" sing N N 31 ACP "C2'" "C1'" sing N N 32 ACP "C2'" "H2'" sing N N 33 ACP "O2'" "HO2'" sing N N 34 ACP "C1'" N9 sing N N 35 ACP "C1'" "H1'" sing N N 36 ACP N9 C8 sing Y N 37 ACP N9 C4 sing Y N 38 ACP C8 N7 doub Y N 39 ACP C8 H8 sing N N 40 ACP N7 C5 sing Y N 41 ACP C5 C6 sing Y N 42 ACP C5 C4 doub Y N 43 ACP C6 N6 sing N N 44 ACP C6 N1 doub Y N 45 ACP N6 HN61 sing N N 46 ACP N6 HN62 sing N N 47 ACP N1 C2 sing Y N 48 ACP C2 N3 doub Y N 49 ACP C2 H2 sing N N 50 ACP N3 C4 sing Y N 51 ALA N CA sing N N 52 ALA N H sing N N 53 ALA N H2 sing N N 54 ALA CA C sing N N 55 ALA CA CB sing N N 56 ALA CA HA sing N N 57 ALA C O doub N N 58 ALA C OXT sing N N 59 ALA CB HB1 sing N N 60 ALA CB HB2 sing N N 61 ALA CB HB3 sing N N 62 ALA OXT HXT sing N N 63 ARG N CA sing N N 64 ARG N H sing N N 65 ARG N H2 sing N N 66 ARG CA C sing N N 67 ARG CA CB sing N N 68 ARG CA HA sing N N 69 ARG C O doub N N 70 ARG C OXT sing N N 71 ARG CB CG sing N N 72 ARG CB HB2 sing N N 73 ARG CB HB3 sing N N 74 ARG CG CD sing N N 75 ARG CG HG2 sing N N 76 ARG CG HG3 sing N N 77 ARG CD NE sing N N 78 ARG CD HD2 sing N N 79 ARG CD HD3 sing N N 80 ARG NE CZ sing N N 81 ARG NE HE sing N N 82 ARG CZ NH1 sing N N 83 ARG CZ NH2 doub N N 84 ARG NH1 HH11 sing N N 85 ARG NH1 HH12 sing N N 86 ARG NH2 HH21 sing N N 87 ARG NH2 HH22 sing N N 88 ARG OXT HXT sing N N 89 ASN N CA sing N N 90 ASN N H sing N N 91 ASN N H2 sing N N 92 ASN CA C sing N N 93 ASN CA CB sing N N 94 ASN CA HA sing N N 95 ASN C O doub N N 96 ASN C OXT sing N N 97 ASN CB CG sing N N 98 ASN CB HB2 sing N N 99 ASN CB HB3 sing N N 100 ASN CG OD1 doub N N 101 ASN CG ND2 sing N N 102 ASN ND2 HD21 sing N N 103 ASN ND2 HD22 sing N N 104 ASN OXT HXT sing N N 105 ASP N CA sing N N 106 ASP N H sing N N 107 ASP N H2 sing N N 108 ASP CA C sing N N 109 ASP CA CB sing N N 110 ASP CA HA sing N N 111 ASP C O doub N N 112 ASP C OXT sing N N 113 ASP CB CG sing N N 114 ASP CB HB2 sing N N 115 ASP CB HB3 sing N N 116 ASP CG OD1 doub N N 117 ASP CG OD2 sing N N 118 ASP OD2 HD2 sing N N 119 ASP OXT HXT sing N N 120 CYS N CA sing N N 121 CYS N H sing N N 122 CYS N H2 sing N N 123 CYS CA C sing N N 124 CYS CA CB sing N N 125 CYS CA HA sing N N 126 CYS C O doub N N 127 CYS C OXT sing N N 128 CYS CB SG sing N N 129 CYS CB HB2 sing N N 130 CYS CB HB3 sing N N 131 CYS SG HG sing N N 132 CYS OXT HXT sing N N 133 GLN N CA sing N N 134 GLN N H sing N N 135 GLN N H2 sing N N 136 GLN CA C sing N N 137 GLN CA CB sing N N 138 GLN CA HA sing N N 139 GLN C O doub N N 140 GLN C OXT sing N N 141 GLN CB CG sing N N 142 GLN CB HB2 sing N N 143 GLN CB HB3 sing N N 144 GLN CG CD sing N N 145 GLN CG HG2 sing N N 146 GLN CG HG3 sing N N 147 GLN CD OE1 doub N N 148 GLN CD NE2 sing N N 149 GLN NE2 HE21 sing N N 150 GLN NE2 HE22 sing N N 151 GLN OXT HXT sing N N 152 GLU N CA sing N N 153 GLU N H sing N N 154 GLU N H2 sing N N 155 GLU CA C sing N N 156 GLU CA CB sing N N 157 GLU CA HA sing N N 158 GLU C O doub N N 159 GLU C OXT sing N N 160 GLU CB CG sing N N 161 GLU CB HB2 sing N N 162 GLU CB HB3 sing N N 163 GLU CG CD sing N N 164 GLU CG HG2 sing N N 165 GLU CG HG3 sing N N 166 GLU CD OE1 doub N N 167 GLU CD OE2 sing N N 168 GLU OE2 HE2 sing N N 169 GLU OXT HXT sing N N 170 GLY N CA sing N N 171 GLY N H sing N N 172 GLY N H2 sing N N 173 GLY CA C sing N N 174 GLY CA HA2 sing N N 175 GLY CA HA3 sing N N 176 GLY C O doub N N 177 GLY C OXT sing N N 178 GLY OXT HXT sing N N 179 HIS N CA sing N N 180 HIS N H sing N N 181 HIS N H2 sing N N 182 HIS CA C sing N N 183 HIS CA CB sing N N 184 HIS CA HA sing N N 185 HIS C O doub N N 186 HIS C OXT sing N N 187 HIS CB CG sing N N 188 HIS CB HB2 sing N N 189 HIS CB HB3 sing N N 190 HIS CG ND1 sing Y N 191 HIS CG CD2 doub Y N 192 HIS ND1 CE1 doub Y N 193 HIS ND1 HD1 sing N N 194 HIS CD2 NE2 sing Y N 195 HIS CD2 HD2 sing N N 196 HIS CE1 NE2 sing Y N 197 HIS CE1 HE1 sing N N 198 HIS NE2 HE2 sing N N 199 HIS OXT HXT sing N N 200 HOH O H1 sing N N 201 HOH O H2 sing N N 202 ILE N CA sing N N 203 ILE N H sing N N 204 ILE N H2 sing N N 205 ILE CA C sing N N 206 ILE CA CB sing N N 207 ILE CA HA sing N N 208 ILE C O doub N N 209 ILE C OXT sing N N 210 ILE CB CG1 sing N N 211 ILE CB CG2 sing N N 212 ILE CB HB sing N N 213 ILE CG1 CD1 sing N N 214 ILE CG1 HG12 sing N N 215 ILE CG1 HG13 sing N N 216 ILE CG2 HG21 sing N N 217 ILE CG2 HG22 sing N N 218 ILE CG2 HG23 sing N N 219 ILE CD1 HD11 sing N N 220 ILE CD1 HD12 sing N N 221 ILE CD1 HD13 sing N N 222 ILE OXT HXT sing N N 223 LEU N CA sing N N 224 LEU N H sing N N 225 LEU N H2 sing N N 226 LEU CA C sing N N 227 LEU CA CB sing N N 228 LEU CA HA sing N N 229 LEU C O doub N N 230 LEU C OXT sing N N 231 LEU CB CG sing N N 232 LEU CB HB2 sing N N 233 LEU CB HB3 sing N N 234 LEU CG CD1 sing N N 235 LEU CG CD2 sing N N 236 LEU CG HG sing N N 237 LEU CD1 HD11 sing N N 238 LEU CD1 HD12 sing N N 239 LEU CD1 HD13 sing N N 240 LEU CD2 HD21 sing N N 241 LEU CD2 HD22 sing N N 242 LEU CD2 HD23 sing N N 243 LEU OXT HXT sing N N 244 LYS N CA sing N N 245 LYS N H sing N N 246 LYS N H2 sing N N 247 LYS CA C sing N N 248 LYS CA CB sing N N 249 LYS CA HA sing N N 250 LYS C O doub N N 251 LYS C OXT sing N N 252 LYS CB CG sing N N 253 LYS CB HB2 sing N N 254 LYS CB HB3 sing N N 255 LYS CG CD sing N N 256 LYS CG HG2 sing N N 257 LYS CG HG3 sing N N 258 LYS CD CE sing N N 259 LYS CD HD2 sing N N 260 LYS CD HD3 sing N N 261 LYS CE NZ sing N N 262 LYS CE HE2 sing N N 263 LYS CE HE3 sing N N 264 LYS NZ HZ1 sing N N 265 LYS NZ HZ2 sing N N 266 LYS NZ HZ3 sing N N 267 LYS OXT HXT sing N N 268 MET N CA sing N N 269 MET N H sing N N 270 MET N H2 sing N N 271 MET CA C sing N N 272 MET CA CB sing N N 273 MET CA HA sing N N 274 MET C O doub N N 275 MET C OXT sing N N 276 MET CB CG sing N N 277 MET CB HB2 sing N N 278 MET CB HB3 sing N N 279 MET CG SD sing N N 280 MET CG HG2 sing N N 281 MET CG HG3 sing N N 282 MET SD CE sing N N 283 MET CE HE1 sing N N 284 MET CE HE2 sing N N 285 MET CE HE3 sing N N 286 MET OXT HXT sing N N 287 OLC C18 C17 sing N N 288 OLC C10 C9 doub N N 289 OLC C10 C11 sing N N 290 OLC C9 C8 sing N N 291 OLC C17 C16 sing N Z 292 OLC C11 C12 sing N N 293 OLC C8 C7 sing N N 294 OLC C24 C22 sing N N 295 OLC C24 O25 sing N N 296 OLC C16 C15 sing N N 297 OLC C12 C13 sing N N 298 OLC C7 C6 sing N N 299 OLC C15 C14 sing N N 300 OLC C13 C14 sing N N 301 OLC C6 C5 sing N N 302 OLC C5 C4 sing N N 303 OLC C4 C3 sing N N 304 OLC C3 C2 sing N N 305 OLC C2 C1 sing N N 306 OLC C21 C22 sing N N 307 OLC C21 O20 sing N N 308 OLC C1 O19 doub N N 309 OLC C1 O20 sing N N 310 OLC C22 O23 sing N N 311 OLC C18 H18 sing N N 312 OLC C18 H18A sing N N 313 OLC C18 H18B sing N N 314 OLC C10 H10 sing N N 315 OLC C9 H9 sing N N 316 OLC C17 H17 sing N N 317 OLC C17 H17A sing N N 318 OLC C11 H11 sing N N 319 OLC C11 H11A sing N N 320 OLC C8 H8 sing N N 321 OLC C8 H8A sing N N 322 OLC C24 H24 sing N N 323 OLC C24 H24A sing N N 324 OLC C16 H16 sing N N 325 OLC C16 H16A sing N N 326 OLC C12 H12 sing N N 327 OLC C12 H12A sing N N 328 OLC C7 H7 sing N N 329 OLC C7 H7A sing N N 330 OLC C15 H15 sing N N 331 OLC C15 H15A sing N N 332 OLC C13 H13 sing N N 333 OLC C13 H13A sing N N 334 OLC C6 H6 sing N N 335 OLC C6 H6A sing N N 336 OLC C14 H14 sing N N 337 OLC C14 H14A sing N N 338 OLC C5 H5 sing N N 339 OLC C5 H5A sing N N 340 OLC C4 H4 sing N N 341 OLC C4 H4A sing N N 342 OLC C3 H3 sing N N 343 OLC C3 H3A sing N N 344 OLC C2 H2 sing N N 345 OLC C2 H2A sing N N 346 OLC C21 H21 sing N N 347 OLC C21 H21A sing N N 348 OLC C22 H22 sing N N 349 OLC O25 HO25 sing N N 350 OLC O23 HO23 sing N N 351 PHE N CA sing N N 352 PHE N H sing N N 353 PHE N H2 sing N N 354 PHE CA C sing N N 355 PHE CA CB sing N N 356 PHE CA HA sing N N 357 PHE C O doub N N 358 PHE C OXT sing N N 359 PHE CB CG sing N N 360 PHE CB HB2 sing N N 361 PHE CB HB3 sing N N 362 PHE CG CD1 doub Y N 363 PHE CG CD2 sing Y N 364 PHE CD1 CE1 sing Y N 365 PHE CD1 HD1 sing N N 366 PHE CD2 CE2 doub Y N 367 PHE CD2 HD2 sing N N 368 PHE CE1 CZ doub Y N 369 PHE CE1 HE1 sing N N 370 PHE CE2 CZ sing Y N 371 PHE CE2 HE2 sing N N 372 PHE CZ HZ sing N N 373 PHE OXT HXT sing N N 374 SER N CA sing N N 375 SER N H sing N N 376 SER N H2 sing N N 377 SER CA C sing N N 378 SER CA CB sing N N 379 SER CA HA sing N N 380 SER C O doub N N 381 SER C OXT sing N N 382 SER CB OG sing N N 383 SER CB HB2 sing N N 384 SER CB HB3 sing N N 385 SER OG HG sing N N 386 SER OXT HXT sing N N 387 THR N CA sing N N 388 THR N H sing N N 389 THR N H2 sing N N 390 THR CA C sing N N 391 THR CA CB sing N N 392 THR CA HA sing N N 393 THR C O doub N N 394 THR C OXT sing N N 395 THR CB OG1 sing N N 396 THR CB CG2 sing N N 397 THR CB HB sing N N 398 THR OG1 HG1 sing N N 399 THR CG2 HG21 sing N N 400 THR CG2 HG22 sing N N 401 THR CG2 HG23 sing N N 402 THR OXT HXT sing N N 403 TRP N CA sing N N 404 TRP N H sing N N 405 TRP N H2 sing N N 406 TRP CA C sing N N 407 TRP CA CB sing N N 408 TRP CA HA sing N N 409 TRP C O doub N N 410 TRP C OXT sing N N 411 TRP CB CG sing N N 412 TRP CB HB2 sing N N 413 TRP CB HB3 sing N N 414 TRP CG CD1 doub Y N 415 TRP CG CD2 sing Y N 416 TRP CD1 NE1 sing Y N 417 TRP CD1 HD1 sing N N 418 TRP CD2 CE2 doub Y N 419 TRP CD2 CE3 sing Y N 420 TRP NE1 CE2 sing Y N 421 TRP NE1 HE1 sing N N 422 TRP CE2 CZ2 sing Y N 423 TRP CE3 CZ3 doub Y N 424 TRP CE3 HE3 sing N N 425 TRP CZ2 CH2 doub Y N 426 TRP CZ2 HZ2 sing N N 427 TRP CZ3 CH2 sing Y N 428 TRP CZ3 HZ3 sing N N 429 TRP CH2 HH2 sing N N 430 TRP OXT HXT sing N N 431 TYR N CA sing N N 432 TYR N H sing N N 433 TYR N H2 sing N N 434 TYR CA C sing N N 435 TYR CA CB sing N N 436 TYR CA HA sing N N 437 TYR C O doub N N 438 TYR C OXT sing N N 439 TYR CB CG sing N N 440 TYR CB HB2 sing N N 441 TYR CB HB3 sing N N 442 TYR CG CD1 doub Y N 443 TYR CG CD2 sing Y N 444 TYR CD1 CE1 sing Y N 445 TYR CD1 HD1 sing N N 446 TYR CD2 CE2 doub Y N 447 TYR CD2 HD2 sing N N 448 TYR CE1 CZ doub Y N 449 TYR CE1 HE1 sing N N 450 TYR CE2 CZ sing Y N 451 TYR CE2 HE2 sing N N 452 TYR CZ OH sing N N 453 TYR OH HH sing N N 454 TYR OXT HXT sing N N 455 VAL N CA sing N N 456 VAL N H sing N N 457 VAL N H2 sing N N 458 VAL CA C sing N N 459 VAL CA CB sing N N 460 VAL CA HA sing N N 461 VAL C O doub N N 462 VAL C OXT sing N N 463 VAL CB CG1 sing N N 464 VAL CB CG2 sing N N 465 VAL CB HB sing N N 466 VAL CG1 HG11 sing N N 467 VAL CG1 HG12 sing N N 468 VAL CG1 HG13 sing N N 469 VAL CG2 HG21 sing N N 470 VAL CG2 HG22 sing N N 471 VAL CG2 HG23 sing N N 472 VAL OXT HXT sing N N 473 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 3ZE3 _pdbx_initial_refinement_model.details 'PDB ENTRY 3ZE3' # _atom_sites.entry_id 4CK0 _atom_sites.fract_transf_matrix[1][1] 0.013732 _atom_sites.fract_transf_matrix[1][2] 0.007928 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.015857 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.005111 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S ZN # loop_