HEADER STRUCTURAL PROTEIN 07-JAN-14 4CKN TITLE STRUCTURE OF AN N-TERMINAL FRAGMENT OF LEISHMANIA SAS-6 CONTAINING TITLE 2 PARTS OF ITS COILED COIL DOMAIN, F257E MUTANT COMPND MOL_ID: 1; COMPND 2 MOLECULE: SAS-6; COMPND 3 CHAIN: A, B, C, D; COMPND 4 FRAGMENT: N-TERMINAL DOMAIN AND PARTS OF THE COILED COIL DOMAIN, COMPND 5 RESIDUES 97-320; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: LEISHMANIA MAJOR; SOURCE 3 ORGANISM_TAXID: 5664; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_VARIANT: ROSETTA; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET28 DERIVATIVE; SOURCE 10 OTHER_DETAILS: SYNTHETIC GENE KEYWDS STRUCTURAL PROTEIN, BASAL BODY, CENTRIOLE, CARTWHEEL, TRYPANOSOMATIDS EXPDTA X-RAY DIFFRACTION AUTHOR M.VAN BREUGEL REVDAT 5 20-DEC-23 4CKN 1 REMARK REVDAT 4 17-JAN-18 4CKN 1 JRNL REVDAT 3 19-MAR-14 4CKN 1 JRNL REVDAT 2 12-MAR-14 4CKN 1 JRNL REVDAT 1 05-MAR-14 4CKN 0 JRNL AUTH M.VAN BREUGEL,R.WILCKEN,S.H.MCLAUGHLIN,T.J.RUTHERFORD, JRNL AUTH 2 C.M.JOHNSON JRNL TITL STRUCTURE OF THE SAS-6 CARTWHEEL HUB FROM LEISHMANIA MAJOR. JRNL REF ELIFE V. 3 01812 2014 JRNL REFN ESSN 2050-084X JRNL PMID 24596152 JRNL DOI 10.7554/ELIFE.01812 REMARK 2 REMARK 2 RESOLUTION. 2.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0047 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 133.10 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 97.8 REMARK 3 NUMBER OF REFLECTIONS : 24090 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.238 REMARK 3 R VALUE (WORKING SET) : 0.237 REMARK 3 FREE R VALUE : 0.256 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1279 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.90 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.98 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1510 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 83.47 REMARK 3 BIN R VALUE (WORKING SET) : 0.4090 REMARK 3 BIN FREE R VALUE SET COUNT : 66 REMARK 3 BIN FREE R VALUE : 0.4470 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5653 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 92.75 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -3.22000 REMARK 3 B22 (A**2) : -1.04000 REMARK 3 B33 (A**2) : 4.49000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -4.49000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 1.376 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.369 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.399 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 22.834 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.933 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.923 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 5759 ; 0.008 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 5544 ; 0.005 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 7802 ; 1.255 ; 1.976 REMARK 3 BOND ANGLES OTHERS (DEGREES): 12704 ; 1.172 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 702 ; 5.652 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 285 ;31.504 ;23.298 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 977 ;15.634 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 56 ;16.215 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 892 ; 0.064 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 6484 ; 0.005 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 1342 ; 0.004 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1021 ; 0.235 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 5227 ; 0.184 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 2804 ; 0.184 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 3571 ; 0.088 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 160 ; 0.132 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): 3 ; 0.110 ; 0.200 REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 17 ; 0.184 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 87 ; 0.262 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 4 ; 0.429 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2835 ; 4.477 ; 9.124 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 2834 ; 4.474 ; 9.122 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3528 ; 7.418 ;13.669 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2924 ; 4.565 ; 9.516 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 4274 ; 7.562 ;14.116 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NCS TYPE: LOCAL REMARK 3 NUMBER OF DIFFERENT NCS PAIRS : 6 REMARK 3 GROUP CHAIN1 RANGE CHAIN2 RANGE COUNT RMS WEIGHT REMARK 3 1 C 130 313 B 130 313 10133 0.11 0.05 REMARK 3 2 C 131 315 D 131 315 9109 0.15 0.05 REMARK 3 3 C 131 313 A 131 313 9824 0.13 0.05 REMARK 3 4 B 131 314 D 131 314 8967 0.15 0.05 REMARK 3 5 B 131 314 A 131 314 9826 0.13 0.05 REMARK 3 6 D 131 314 A 131 314 8877 0.16 0.05 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. U VALUES REFINED INDIVIDUALLY REMARK 4 REMARK 4 4CKN COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 07-JAN-14. REMARK 100 THE DEPOSITION ID IS D_1290058906. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 05-MAY-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.85 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID29 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.90 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 25904 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.900 REMARK 200 RESOLUTION RANGE LOW (A) : 46.910 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.900 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 7.200 REMARK 200 R MERGE (I) : 0.15000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.08 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 7.10 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 0.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 4CKM REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 57.52 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.89 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM NACITRATE PH 5.85, 21% (W/V) REMARK 280 PEG-3000 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 54.42750 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 40.62650 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 54.42750 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 40.62650 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2740 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 20610 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -25.6 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2740 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 20540 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -25.9 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 95 REMARK 465 PRO A 96 REMARK 465 HIS A 97 REMARK 465 MET A 98 REMARK 465 GLU A 99 REMARK 465 ALA A 100 REMARK 465 VAL A 101 REMARK 465 GLU A 102 REMARK 465 SER A 103 REMARK 465 GLY A 104 REMARK 465 VAL A 105 REMARK 465 ALA A 106 REMARK 465 PRO A 107 REMARK 465 PRO A 108 REMARK 465 PRO A 109 REMARK 465 ALA A 110 REMARK 465 VAL A 111 REMARK 465 ARG A 112 REMARK 465 THR A 113 REMARK 465 ALA A 114 REMARK 465 ARG A 115 REMARK 465 THR A 116 REMARK 465 ASP A 117 REMARK 465 LEU A 118 REMARK 465 PRO A 119 REMARK 465 ALA A 120 REMARK 465 LEU A 121 REMARK 465 ALA A 122 REMARK 465 SER A 123 REMARK 465 PRO A 124 REMARK 465 LYS A 125 REMARK 465 HIS A 126 REMARK 465 SER A 127 REMARK 465 ALA A 128 REMARK 465 GLU A 129 REMARK 465 GLU A 130 REMARK 465 SER A 238 REMARK 465 ALA A 239 REMARK 465 ALA A 240 REMARK 465 VAL A 241 REMARK 465 GLY A 242 REMARK 465 ASP A 243 REMARK 465 ASN A 315 REMARK 465 ASP A 316 REMARK 465 ALA A 317 REMARK 465 LEU A 318 REMARK 465 ARG A 319 REMARK 465 ALA A 320 REMARK 465 GLY B 95 REMARK 465 PRO B 96 REMARK 465 HIS B 97 REMARK 465 MET B 98 REMARK 465 GLU B 99 REMARK 465 ALA B 100 REMARK 465 VAL B 101 REMARK 465 GLU B 102 REMARK 465 SER B 103 REMARK 465 GLY B 104 REMARK 465 VAL B 105 REMARK 465 ALA B 106 REMARK 465 PRO B 107 REMARK 465 PRO B 108 REMARK 465 PRO B 109 REMARK 465 ALA B 110 REMARK 465 VAL B 111 REMARK 465 ARG B 112 REMARK 465 THR B 113 REMARK 465 ALA B 114 REMARK 465 ARG B 115 REMARK 465 THR B 116 REMARK 465 ASP B 117 REMARK 465 LEU B 118 REMARK 465 PRO B 119 REMARK 465 ALA B 120 REMARK 465 LEU B 121 REMARK 465 ALA B 122 REMARK 465 SER B 123 REMARK 465 PRO B 124 REMARK 465 LYS B 125 REMARK 465 HIS B 126 REMARK 465 SER B 127 REMARK 465 ALA B 128 REMARK 465 GLU B 129 REMARK 465 ALA B 239 REMARK 465 ALA B 240 REMARK 465 VAL B 241 REMARK 465 GLY B 242 REMARK 465 ASP B 243 REMARK 465 ASN B 315 REMARK 465 ASP B 316 REMARK 465 ALA B 317 REMARK 465 LEU B 318 REMARK 465 ARG B 319 REMARK 465 ALA B 320 REMARK 465 GLY C 95 REMARK 465 PRO C 96 REMARK 465 HIS C 97 REMARK 465 MET C 98 REMARK 465 GLU C 99 REMARK 465 ALA C 100 REMARK 465 VAL C 101 REMARK 465 GLU C 102 REMARK 465 SER C 103 REMARK 465 GLY C 104 REMARK 465 VAL C 105 REMARK 465 ALA C 106 REMARK 465 PRO C 107 REMARK 465 PRO C 108 REMARK 465 PRO C 109 REMARK 465 ALA C 110 REMARK 465 VAL C 111 REMARK 465 ARG C 112 REMARK 465 THR C 113 REMARK 465 ALA C 114 REMARK 465 ARG C 115 REMARK 465 THR C 116 REMARK 465 ASP C 117 REMARK 465 LEU C 118 REMARK 465 PRO C 119 REMARK 465 ALA C 120 REMARK 465 LEU C 121 REMARK 465 ALA C 122 REMARK 465 SER C 123 REMARK 465 PRO C 124 REMARK 465 LYS C 125 REMARK 465 HIS C 126 REMARK 465 SER C 127 REMARK 465 ALA C 128 REMARK 465 GLU C 129 REMARK 465 ALA C 239 REMARK 465 ALA C 240 REMARK 465 VAL C 241 REMARK 465 GLY C 242 REMARK 465 ASP C 243 REMARK 465 ASP C 316 REMARK 465 ALA C 317 REMARK 465 LEU C 318 REMARK 465 ARG C 319 REMARK 465 ALA C 320 REMARK 465 GLY D 95 REMARK 465 PRO D 96 REMARK 465 HIS D 97 REMARK 465 MET D 98 REMARK 465 GLU D 99 REMARK 465 ALA D 100 REMARK 465 VAL D 101 REMARK 465 GLU D 102 REMARK 465 SER D 103 REMARK 465 GLY D 104 REMARK 465 VAL D 105 REMARK 465 ALA D 106 REMARK 465 PRO D 107 REMARK 465 PRO D 108 REMARK 465 PRO D 109 REMARK 465 ALA D 110 REMARK 465 VAL D 111 REMARK 465 ARG D 112 REMARK 465 THR D 113 REMARK 465 ALA D 114 REMARK 465 ARG D 115 REMARK 465 THR D 116 REMARK 465 ASP D 117 REMARK 465 LEU D 118 REMARK 465 PRO D 119 REMARK 465 ALA D 120 REMARK 465 LEU D 121 REMARK 465 ALA D 122 REMARK 465 SER D 123 REMARK 465 PRO D 124 REMARK 465 LYS D 125 REMARK 465 HIS D 126 REMARK 465 SER D 127 REMARK 465 ALA D 128 REMARK 465 GLU D 129 REMARK 465 GLU D 130 REMARK 465 LYS D 200 REMARK 465 GLN D 201 REMARK 465 HIS D 202 REMARK 465 LEU D 203 REMARK 465 GLU D 204 REMARK 465 LEU D 205 REMARK 465 LEU D 206 REMARK 465 SER D 238 REMARK 465 ALA D 239 REMARK 465 ALA D 240 REMARK 465 VAL D 241 REMARK 465 GLY D 242 REMARK 465 ASP D 243 REMARK 465 ASP D 316 REMARK 465 ALA D 317 REMARK 465 LEU D 318 REMARK 465 ARG D 319 REMARK 465 ALA D 320 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE2 GLU D 136 NH2 ARG D 282 2.10 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OE1 GLN B 284 NH1 ARG C 163 3555 2.08 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG D 282 NE - CZ - NH1 ANGL. DEV. = 3.6 DEGREES REMARK 500 ARG D 282 NE - CZ - NH2 ANGL. DEV. = -3.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 700 REMARK 700 SHEET REMARK 700 DETERMINATION METHOD: DSSP REMARK 700 THE SHEETS PRESENTED AS "AA" IN EACH CHAIN ON SHEET RECORDS REMARK 700 BELOW IS ACTUALLY AN 7-STRANDED BARREL THIS IS REPRESENTED BY REMARK 700 A 8-STRANDED SHEET IN WHICH THE FIRST AND LAST STRANDS REMARK 700 ARE IDENTICAL. REMARK 700 THE SHEETS PRESENTED AS "BA" IN EACH CHAIN ON SHEET RECORDS REMARK 700 BELOW IS ACTUALLY AN 7-STRANDED BARREL THIS IS REPRESENTED BY REMARK 700 A 8-STRANDED SHEET IN WHICH THE FIRST AND LAST STRANDS REMARK 700 ARE IDENTICAL. REMARK 700 THE SHEETS PRESENTED AS "CA" IN EACH CHAIN ON SHEET RECORDS REMARK 700 BELOW IS ACTUALLY AN 7-STRANDED BARREL THIS IS REPRESENTED BY REMARK 700 A 8-STRANDED SHEET IN WHICH THE FIRST AND LAST STRANDS REMARK 700 ARE IDENTICAL. REMARK 700 THE SHEETS PRESENTED AS "DA" IN EACH CHAIN ON SHEET RECORDS REMARK 700 BELOW IS ACTUALLY AN 7-STRANDED BARREL THIS IS REPRESENTED BY REMARK 700 A 8-STRANDED SHEET IN WHICH THE FIRST AND LAST STRANDS REMARK 700 ARE IDENTICAL. REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4CKM RELATED DB: PDB REMARK 900 STRUCTURE OF THE N-TERMINAL DOMAIN OF LEISHMANIA SAS-6 REMARK 900 RELATED ID: 4CKP RELATED DB: PDB REMARK 900 STRUCTURE OF AN N-TERMINAL FRAGMENT OF LEISHMANIA SAS-6 THAT REMARK 900 CONTAINS PART OF ITS COILED COIL DOMAIN REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE CRYSTALLISED CONSTRUCT CONTAINS THE F257E MUTATION TO REMARK 999 WEAKEN DIMERISATION OF THE N-TERMINAL DOMAIN. DBREF 4CKN A 97 320 UNP E9AFQ5 E9AFQ5_LEIMA 97 320 DBREF 4CKN B 97 320 UNP E9AFQ5 E9AFQ5_LEIMA 97 320 DBREF 4CKN C 97 320 UNP E9AFQ5 E9AFQ5_LEIMA 97 320 DBREF 4CKN D 97 320 UNP E9AFQ5 E9AFQ5_LEIMA 97 320 SEQADV 4CKN GLY A 95 UNP E9AFQ5 EXPRESSION TAG SEQADV 4CKN PRO A 96 UNP E9AFQ5 EXPRESSION TAG SEQADV 4CKN GLU A 257 UNP E9AFQ5 PHE 257 ENGINEERED MUTATION SEQADV 4CKN GLY B 95 UNP E9AFQ5 EXPRESSION TAG SEQADV 4CKN PRO B 96 UNP E9AFQ5 EXPRESSION TAG SEQADV 4CKN GLU B 257 UNP E9AFQ5 PHE 257 ENGINEERED MUTATION SEQADV 4CKN GLY C 95 UNP E9AFQ5 EXPRESSION TAG SEQADV 4CKN PRO C 96 UNP E9AFQ5 EXPRESSION TAG SEQADV 4CKN GLU C 257 UNP E9AFQ5 PHE 257 ENGINEERED MUTATION SEQADV 4CKN GLY D 95 UNP E9AFQ5 EXPRESSION TAG SEQADV 4CKN PRO D 96 UNP E9AFQ5 EXPRESSION TAG SEQADV 4CKN GLU D 257 UNP E9AFQ5 PHE 257 ENGINEERED MUTATION SEQRES 1 A 226 GLY PRO HIS MET GLU ALA VAL GLU SER GLY VAL ALA PRO SEQRES 2 A 226 PRO PRO ALA VAL ARG THR ALA ARG THR ASP LEU PRO ALA SEQRES 3 A 226 LEU ALA SER PRO LYS HIS SER ALA GLU GLU PRO GLN THR SEQRES 4 A 226 LEU LEU GLU THR THR VAL MET VAL SER THR LYS MET PRO SEQRES 5 A 226 PRO HIS GLU PRO GLN VAL ARG PRO LEU GLY VAL TYR VAL SEQRES 6 A 226 ARG THR GLY ARG GLY GLY PRO ASN GLY VAL THR ARG VAL SEQRES 7 A 226 VAL LEU VAL ARG LEU THR ASP PRO THR ASP PRO PHE PHE SEQRES 8 A 226 LEU PHE GLU LEU GLU LEU LEU GLU ASP ASP TYR ASN ALA SEQRES 9 A 226 PHE LYS GLN HIS LEU GLU LEU LEU VAL ASP PHE HIS GLY SEQRES 10 A 226 PHE PRO ARG TYR LEU VAL GLY MET LEU ARG ASP ILE ALA SEQRES 11 A 226 ASP GLY ALA SER ALA TYR GLU LEU SER PHE VAL LEU ASN SEQRES 12 A 226 SER ALA ALA VAL GLY ASP SER ASN ARG GLY THR LEU ARG SEQRES 13 A 226 VAL LEU GLU THR THR ASP GLU LYS THR VAL GLU HIS ILE SEQRES 14 A 226 SER LEU VAL LEU LEU ARG GLN GLY ASP ALA GLY LEU LYS SEQRES 15 A 226 ARG TYR LEU ALA GLU ARG PHE GLN HIS TYR GLU GLN SER SEQRES 16 A 226 PHE ARG ALA SER GLU ALA SER ARG ALA VAL ILE THR ALA SEQRES 17 A 226 GLU LEU GLN GLU LYS ILE GLY ASP LEU GLN ALA ALA ASN SEQRES 18 A 226 ASP ALA LEU ARG ALA SEQRES 1 B 226 GLY PRO HIS MET GLU ALA VAL GLU SER GLY VAL ALA PRO SEQRES 2 B 226 PRO PRO ALA VAL ARG THR ALA ARG THR ASP LEU PRO ALA SEQRES 3 B 226 LEU ALA SER PRO LYS HIS SER ALA GLU GLU PRO GLN THR SEQRES 4 B 226 LEU LEU GLU THR THR VAL MET VAL SER THR LYS MET PRO SEQRES 5 B 226 PRO HIS GLU PRO GLN VAL ARG PRO LEU GLY VAL TYR VAL SEQRES 6 B 226 ARG THR GLY ARG GLY GLY PRO ASN GLY VAL THR ARG VAL SEQRES 7 B 226 VAL LEU VAL ARG LEU THR ASP PRO THR ASP PRO PHE PHE SEQRES 8 B 226 LEU PHE GLU LEU GLU LEU LEU GLU ASP ASP TYR ASN ALA SEQRES 9 B 226 PHE LYS GLN HIS LEU GLU LEU LEU VAL ASP PHE HIS GLY SEQRES 10 B 226 PHE PRO ARG TYR LEU VAL GLY MET LEU ARG ASP ILE ALA SEQRES 11 B 226 ASP GLY ALA SER ALA TYR GLU LEU SER PHE VAL LEU ASN SEQRES 12 B 226 SER ALA ALA VAL GLY ASP SER ASN ARG GLY THR LEU ARG SEQRES 13 B 226 VAL LEU GLU THR THR ASP GLU LYS THR VAL GLU HIS ILE SEQRES 14 B 226 SER LEU VAL LEU LEU ARG GLN GLY ASP ALA GLY LEU LYS SEQRES 15 B 226 ARG TYR LEU ALA GLU ARG PHE GLN HIS TYR GLU GLN SER SEQRES 16 B 226 PHE ARG ALA SER GLU ALA SER ARG ALA VAL ILE THR ALA SEQRES 17 B 226 GLU LEU GLN GLU LYS ILE GLY ASP LEU GLN ALA ALA ASN SEQRES 18 B 226 ASP ALA LEU ARG ALA SEQRES 1 C 226 GLY PRO HIS MET GLU ALA VAL GLU SER GLY VAL ALA PRO SEQRES 2 C 226 PRO PRO ALA VAL ARG THR ALA ARG THR ASP LEU PRO ALA SEQRES 3 C 226 LEU ALA SER PRO LYS HIS SER ALA GLU GLU PRO GLN THR SEQRES 4 C 226 LEU LEU GLU THR THR VAL MET VAL SER THR LYS MET PRO SEQRES 5 C 226 PRO HIS GLU PRO GLN VAL ARG PRO LEU GLY VAL TYR VAL SEQRES 6 C 226 ARG THR GLY ARG GLY GLY PRO ASN GLY VAL THR ARG VAL SEQRES 7 C 226 VAL LEU VAL ARG LEU THR ASP PRO THR ASP PRO PHE PHE SEQRES 8 C 226 LEU PHE GLU LEU GLU LEU LEU GLU ASP ASP TYR ASN ALA SEQRES 9 C 226 PHE LYS GLN HIS LEU GLU LEU LEU VAL ASP PHE HIS GLY SEQRES 10 C 226 PHE PRO ARG TYR LEU VAL GLY MET LEU ARG ASP ILE ALA SEQRES 11 C 226 ASP GLY ALA SER ALA TYR GLU LEU SER PHE VAL LEU ASN SEQRES 12 C 226 SER ALA ALA VAL GLY ASP SER ASN ARG GLY THR LEU ARG SEQRES 13 C 226 VAL LEU GLU THR THR ASP GLU LYS THR VAL GLU HIS ILE SEQRES 14 C 226 SER LEU VAL LEU LEU ARG GLN GLY ASP ALA GLY LEU LYS SEQRES 15 C 226 ARG TYR LEU ALA GLU ARG PHE GLN HIS TYR GLU GLN SER SEQRES 16 C 226 PHE ARG ALA SER GLU ALA SER ARG ALA VAL ILE THR ALA SEQRES 17 C 226 GLU LEU GLN GLU LYS ILE GLY ASP LEU GLN ALA ALA ASN SEQRES 18 C 226 ASP ALA LEU ARG ALA SEQRES 1 D 226 GLY PRO HIS MET GLU ALA VAL GLU SER GLY VAL ALA PRO SEQRES 2 D 226 PRO PRO ALA VAL ARG THR ALA ARG THR ASP LEU PRO ALA SEQRES 3 D 226 LEU ALA SER PRO LYS HIS SER ALA GLU GLU PRO GLN THR SEQRES 4 D 226 LEU LEU GLU THR THR VAL MET VAL SER THR LYS MET PRO SEQRES 5 D 226 PRO HIS GLU PRO GLN VAL ARG PRO LEU GLY VAL TYR VAL SEQRES 6 D 226 ARG THR GLY ARG GLY GLY PRO ASN GLY VAL THR ARG VAL SEQRES 7 D 226 VAL LEU VAL ARG LEU THR ASP PRO THR ASP PRO PHE PHE SEQRES 8 D 226 LEU PHE GLU LEU GLU LEU LEU GLU ASP ASP TYR ASN ALA SEQRES 9 D 226 PHE LYS GLN HIS LEU GLU LEU LEU VAL ASP PHE HIS GLY SEQRES 10 D 226 PHE PRO ARG TYR LEU VAL GLY MET LEU ARG ASP ILE ALA SEQRES 11 D 226 ASP GLY ALA SER ALA TYR GLU LEU SER PHE VAL LEU ASN SEQRES 12 D 226 SER ALA ALA VAL GLY ASP SER ASN ARG GLY THR LEU ARG SEQRES 13 D 226 VAL LEU GLU THR THR ASP GLU LYS THR VAL GLU HIS ILE SEQRES 14 D 226 SER LEU VAL LEU LEU ARG GLN GLY ASP ALA GLY LEU LYS SEQRES 15 D 226 ARG TYR LEU ALA GLU ARG PHE GLN HIS TYR GLU GLN SER SEQRES 16 D 226 PHE ARG ALA SER GLU ALA SER ARG ALA VAL ILE THR ALA SEQRES 17 D 226 GLU LEU GLN GLU LYS ILE GLY ASP LEU GLN ALA ALA ASN SEQRES 18 D 226 ASP ALA LEU ARG ALA HELIX 1 1 ASP A 195 GLU A 204 1 10 HELIX 2 2 GLY A 211 ASP A 225 1 15 HELIX 3 3 GLY A 271 ALA A 314 1 44 HELIX 4 4 ASP B 195 GLU B 204 1 10 HELIX 5 5 GLY B 211 GLY B 226 1 16 HELIX 6 6 GLY B 271 GLN B 312 1 42 HELIX 7 7 ASP C 195 GLU C 204 1 10 HELIX 8 8 GLY C 211 GLY C 226 1 16 HELIX 9 9 GLY C 271 ASN C 315 1 45 HELIX 10 10 HIS D 210 ASP D 225 1 16 HELIX 11 11 GLY D 271 ASN D 315 1 45 SHEET 1 AA 8 GLN A 132 LYS A 144 0 SHEET 2 AA 8 GLN A 151 GLY A 164 -1 O GLN A 151 N THR A 143 SHEET 3 AA 8 THR A 170 ASP A 179 -1 O THR A 170 N GLY A 164 SHEET 4 AA 8 ASP A 182 LEU A 192 -1 N ASP A 182 O ASP A 179 SHEET 5 AA 8 THR A 259 ARG A 269 -1 O LEU A 268 N GLU A 188 SHEET 6 AA 8 ARG A 246 THR A 254 -1 O GLY A 247 N LEU A 267 SHEET 7 AA 8 TYR A 230 LEU A 236 -1 O GLU A 231 N LEU A 252 SHEET 8 AA 8 GLN A 132 LYS A 144 1 O SER A 142 N PHE A 234 SHEET 1 BA 8 GLN B 132 LYS B 144 0 SHEET 2 BA 8 GLN B 151 GLY B 164 -1 O GLN B 151 N THR B 143 SHEET 3 BA 8 THR B 170 ASP B 179 -1 O THR B 170 N GLY B 164 SHEET 4 BA 8 ASP B 182 LEU B 192 -1 N ASP B 182 O ASP B 179 SHEET 5 BA 8 THR B 259 ARG B 269 -1 O LEU B 268 N GLU B 188 SHEET 6 BA 8 ARG B 246 THR B 254 -1 O GLY B 247 N LEU B 267 SHEET 7 BA 8 TYR B 230 LEU B 236 -1 O GLU B 231 N LEU B 252 SHEET 8 BA 8 GLN B 132 LYS B 144 1 O SER B 142 N PHE B 234 SHEET 1 CA 8 GLN C 132 LYS C 144 0 SHEET 2 CA 8 GLN C 151 GLY C 164 -1 O GLN C 151 N THR C 143 SHEET 3 CA 8 THR C 170 ASP C 179 -1 O THR C 170 N GLY C 164 SHEET 4 CA 8 ASP C 182 LEU C 192 -1 N ASP C 182 O ASP C 179 SHEET 5 CA 8 THR C 259 ARG C 269 -1 O LEU C 268 N GLU C 188 SHEET 6 CA 8 ARG C 246 THR C 254 -1 O GLY C 247 N LEU C 267 SHEET 7 CA 8 TYR C 230 LEU C 236 -1 O GLU C 231 N LEU C 252 SHEET 8 CA 8 GLN C 132 LYS C 144 1 O SER C 142 N PHE C 234 SHEET 1 DA 8 GLN D 132 LYS D 144 0 SHEET 2 DA 8 GLN D 151 GLY D 164 -1 O GLN D 151 N THR D 143 SHEET 3 DA 8 THR D 170 ASP D 179 -1 O THR D 170 N GLY D 164 SHEET 4 DA 8 ASP D 182 LEU D 192 -1 N ASP D 182 O ASP D 179 SHEET 5 DA 8 THR D 259 ARG D 269 -1 O LEU D 268 N GLU D 188 SHEET 6 DA 8 ARG D 246 THR D 254 -1 O GLY D 247 N LEU D 267 SHEET 7 DA 8 TYR D 230 LEU D 236 -1 O GLU D 231 N LEU D 252 SHEET 8 DA 8 GLN D 132 LYS D 144 1 O SER D 142 N PHE D 234 CRYST1 108.855 81.253 133.149 90.00 91.50 90.00 C 1 2 1 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009187 0.000000 0.000241 0.00000 SCALE2 0.000000 0.012307 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007513 0.00000 MTRIX1 1 -0.415200 -0.776000 0.474800 -36.12000 1 MTRIX2 1 -0.826700 0.104100 -0.552900 -7.00800 1 MTRIX3 1 0.379600 -0.622100 -0.684700 36.66000 1 MTRIX1 2 -0.119900 -0.662900 0.739100 -67.11000 1 MTRIX2 2 -0.650000 -0.510300 -0.563100 -83.93000 1 MTRIX3 2 0.750400 -0.547900 -0.369700 7.84600 1 MTRIX1 3 0.823700 -0.508300 -0.251100 -28.05000 1 MTRIX2 3 0.566200 0.760500 0.317800 -76.77000 1 MTRIX3 3 0.029430 -0.404000 0.914300 -31.71000 1