HEADER OXIDOREDUCTASE 28-JAN-14 4COJ TITLE CRYSTAL STRUCTURE OF THE ANAEROBIC RIBONUCLEOTIDE REDUCTASE FROM TITLE 2 THERMOTOGA MARITIMA IN COMPLEX WITH DATP AND CTP COMPND MOL_ID: 1; COMPND 2 MOLECULE: ANAEROBIC RIBONUCLEOSIDE-TRIPHOSPHATE REDUCTASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: ANAEROBIC RIBONUCLEOTIDE REDUCTASE; COMPND 5 EC: 1.17.4.2; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: THERMOTOGA MARITIMA; SOURCE 3 ORGANISM_TAXID: 243274; SOURCE 4 STRAIN: MSB8; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VARIANT: CODONPLUS-RIL; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_VECTOR: PRSFDUET-1 KEYWDS OXIDOREDUCTASE, RADICAL CHEMISTRY, ALLOSTERIC REGULATION, ANAEROBIC KEYWDS 2 ENZYME EXPDTA X-RAY DIFFRACTION AUTHOR O.AURELIUS,R.JOHANSSON,V.BAGENHOLM,T.BECK,A.BALHUIZEN,D.LUNDIN, AUTHOR 2 B.M.SJOBERG,E.MULLIEZ,D.T.LOGAN REVDAT 4 08-MAY-24 4COJ 1 REMARK LINK REVDAT 3 17-JAN-18 4COJ 1 REMARK REVDAT 2 15-JUL-15 4COJ 1 JRNL REVDAT 1 06-MAY-15 4COJ 0 JRNL AUTH O.AURELIUS,R.JOHANSSON,V.BAGENHOLM,T.BECK,A.BALHUIZEN, JRNL AUTH 2 D.LUNDIN,B.M.SJOBERG,E.MULLIEZ,D.T.LOGAN JRNL TITL THE CRYSTAL STRUCTURE OF THERMOTOGA MARITIMA CLASS III JRNL TITL 2 RIBONUCLEOTIDE REDUCTASE LACKS A RADICAL CYSTEINE JRNL TITL 3 PRE-POSITIONED IN THE ACTIVE SITE. JRNL REF PLOS ONE V. 10 01281 2015 JRNL REFN ESSN 1932-6203 JRNL PMID 26147435 JRNL DOI 10.1371/JOURNAL.PONE.0128199 REMARK 2 REMARK 2 RESOLUTION. 2.48 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.48 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.14 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.710 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 41467 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.205 REMARK 3 R VALUE (WORKING SET) : 0.204 REMARK 3 FREE R VALUE : 0.242 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 2.500 REMARK 3 FREE R VALUE TEST SET COUNT : 1050 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 29.1421 - 4.7384 1.00 5863 160 0.1549 0.1679 REMARK 3 2 4.7384 - 3.7635 0.99 5788 142 0.1560 0.1788 REMARK 3 3 3.7635 - 3.2885 0.99 5731 161 0.2102 0.2696 REMARK 3 4 3.2885 - 2.9882 1.00 5765 137 0.2342 0.3293 REMARK 3 5 2.9882 - 2.7742 1.00 5760 168 0.2596 0.2968 REMARK 3 6 2.7742 - 2.6107 0.99 5758 127 0.2788 0.3372 REMARK 3 7 2.6107 - 2.4801 1.00 5752 155 0.2845 0.3195 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.330 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 28.300 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 31.50 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 10170 REMARK 3 ANGLE : 0.786 13724 REMARK 3 CHIRALITY : 0.030 1455 REMARK 3 PLANARITY : 0.003 1722 REMARK 3 DIHEDRAL : 14.121 3767 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 9 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1 THROUGH 178 ) REMARK 3 ORIGIN FOR THE GROUP (A): 17.0091 6.6076 34.5137 REMARK 3 T TENSOR REMARK 3 T11: 0.1112 T22: 0.9537 REMARK 3 T33: 0.2391 T12: -0.0910 REMARK 3 T13: 0.0865 T23: 0.0727 REMARK 3 L TENSOR REMARK 3 L11: 1.3144 L22: 0.5838 REMARK 3 L33: 1.7945 L12: -0.5449 REMARK 3 L13: 0.1696 L23: -0.1312 REMARK 3 S TENSOR REMARK 3 S11: -0.0488 S12: 0.4882 S13: -0.0454 REMARK 3 S21: -0.1850 S22: -0.1525 S23: -0.0225 REMARK 3 S31: -0.4133 S32: 0.8558 S33: 0.0703 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 179 THROUGH 320 ) REMARK 3 ORIGIN FOR THE GROUP (A): -7.7798 1.8563 54.2715 REMARK 3 T TENSOR REMARK 3 T11: 0.0400 T22: 1.0967 REMARK 3 T33: 0.2391 T12: -0.1237 REMARK 3 T13: 0.0962 T23: 0.0704 REMARK 3 L TENSOR REMARK 3 L11: 1.5516 L22: 0.6683 REMARK 3 L33: 1.8215 L12: 0.2284 REMARK 3 L13: -0.3679 L23: 0.1520 REMARK 3 S TENSOR REMARK 3 S11: 0.1854 S12: -0.5653 S13: -0.1266 REMARK 3 S21: 0.4392 S22: -0.0030 S23: -0.0484 REMARK 3 S31: 0.0087 S32: -1.3897 S33: 0.0797 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 321 THROUGH 417 ) REMARK 3 ORIGIN FOR THE GROUP (A): 22.3506 8.8230 52.3604 REMARK 3 T TENSOR REMARK 3 T11: 0.3170 T22: 0.5538 REMARK 3 T33: 0.2599 T12: -0.1208 REMARK 3 T13: -0.0351 T23: 0.0305 REMARK 3 L TENSOR REMARK 3 L11: 1.2823 L22: 1.5156 REMARK 3 L33: 2.2527 L12: 0.3194 REMARK 3 L13: 0.1379 L23: -0.6789 REMARK 3 S TENSOR REMARK 3 S11: -0.1144 S12: -0.3287 S13: 0.3132 REMARK 3 S21: 0.2064 S22: 0.0200 S23: 0.0362 REMARK 3 S31: -0.4246 S32: 1.1077 S33: 0.1051 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 418 THROUGH 566 ) REMARK 3 ORIGIN FOR THE GROUP (A): 22.1623 -1.9631 55.7618 REMARK 3 T TENSOR REMARK 3 T11: 0.2855 T22: 0.5355 REMARK 3 T33: 0.2062 T12: -0.0098 REMARK 3 T13: -0.0254 T23: 0.0418 REMARK 3 L TENSOR REMARK 3 L11: 2.4330 L22: 1.1978 REMARK 3 L33: 2.7964 L12: -0.7349 REMARK 3 L13: 0.8607 L23: -0.5266 REMARK 3 S TENSOR REMARK 3 S11: 0.0942 S12: -0.1593 S13: -0.2276 REMARK 3 S21: 0.1522 S22: -0.1439 S23: -0.0309 REMARK 3 S31: 0.2261 S32: 0.6682 S33: 0.0453 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 567 THROUGH 633 ) REMARK 3 ORIGIN FOR THE GROUP (A): 3.7942 -14.6622 52.2967 REMARK 3 T TENSOR REMARK 3 T11: 0.6146 T22: 0.3849 REMARK 3 T33: 0.4833 T12: -0.1620 REMARK 3 T13: -0.1357 T23: 0.1758 REMARK 3 L TENSOR REMARK 3 L11: 1.5763 L22: 2.5636 REMARK 3 L33: 1.7995 L12: 1.2487 REMARK 3 L13: 0.3011 L23: 1.3047 REMARK 3 S TENSOR REMARK 3 S11: 0.2864 S12: -0.2370 S13: -0.4683 REMARK 3 S21: 0.0789 S22: 0.0811 S23: -0.1534 REMARK 3 S31: 1.0322 S32: -0.2655 S33: -0.2118 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 1 THROUGH 178 ) REMARK 3 ORIGIN FOR THE GROUP (A): 8.9405 1.1558 16.0939 REMARK 3 T TENSOR REMARK 3 T11: 0.2364 T22: 0.6876 REMARK 3 T33: 0.2354 T12: 0.0446 REMARK 3 T13: 0.0567 T23: 0.0064 REMARK 3 L TENSOR REMARK 3 L11: 1.6742 L22: 0.7865 REMARK 3 L33: 2.1189 L12: 0.1572 REMARK 3 L13: 0.6620 L23: -0.5828 REMARK 3 S TENSOR REMARK 3 S11: 0.1199 S12: 0.4789 S13: -0.1272 REMARK 3 S21: -0.1488 S22: -0.1225 S23: -0.1919 REMARK 3 S31: 0.2487 S32: 0.9544 S33: -0.0151 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 179 THROUGH 350 ) REMARK 3 ORIGIN FOR THE GROUP (A): -22.3550 5.0791 20.1639 REMARK 3 T TENSOR REMARK 3 T11: 0.1513 T22: 0.9234 REMARK 3 T33: 0.2994 T12: -0.0327 REMARK 3 T13: -0.0465 T23: 0.0117 REMARK 3 L TENSOR REMARK 3 L11: 1.5578 L22: 1.6072 REMARK 3 L33: 1.5268 L12: 0.3717 REMARK 3 L13: 0.3996 L23: -0.0383 REMARK 3 S TENSOR REMARK 3 S11: 0.0617 S12: -0.6174 S13: -0.1021 REMARK 3 S21: -0.2443 S22: 0.0297 S23: 0.2545 REMARK 3 S31: 0.0058 S32: -1.3354 S33: -0.0560 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 351 THROUGH 546 ) REMARK 3 ORIGIN FOR THE GROUP (A): -0.7964 5.9756 -1.9126 REMARK 3 T TENSOR REMARK 3 T11: 0.3262 T22: 0.5250 REMARK 3 T33: 0.2006 T12: -0.0196 REMARK 3 T13: 0.0009 T23: 0.0036 REMARK 3 L TENSOR REMARK 3 L11: 1.8623 L22: 0.9502 REMARK 3 L33: 2.9692 L12: 0.1741 REMARK 3 L13: 0.7952 L23: -0.3893 REMARK 3 S TENSOR REMARK 3 S11: -0.0091 S12: 0.6706 S13: 0.1007 REMARK 3 S21: -0.1910 S22: -0.0546 S23: -0.0621 REMARK 3 S31: 0.1487 S32: 0.7851 S33: 0.0531 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 547 THROUGH 637 ) REMARK 3 ORIGIN FOR THE GROUP (A): -12.7786 21.0738 11.5458 REMARK 3 T TENSOR REMARK 3 T11: 0.4919 T22: 0.3865 REMARK 3 T33: 0.4192 T12: 0.1066 REMARK 3 T13: -0.1420 T23: -0.0769 REMARK 3 L TENSOR REMARK 3 L11: 0.8764 L22: 2.1297 REMARK 3 L33: 3.0899 L12: -0.0671 REMARK 3 L13: 0.3388 L23: 1.8372 REMARK 3 S TENSOR REMARK 3 S11: -0.4200 S12: -0.3659 S13: 0.5585 REMARK 3 S21: -0.2456 S22: 0.2296 S23: -0.2033 REMARK 3 S31: -0.8392 S32: -0.1508 S33: 0.1731 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4COJ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 28-JAN-14. REMARK 100 THE DEPOSITION ID IS D_1290059600. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-MAR-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : MAX II REMARK 200 BEAMLINE : I911-3 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9800 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL REMARK 200 OPTICS : TOROIDAL MIRROR FOR HORIZONTAL REMARK 200 AND VERTICAL FOCUSING REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 44053 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.420 REMARK 200 RESOLUTION RANGE LOW (A) : 29.400 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.8 REMARK 200 DATA REDUNDANCY : 4.200 REMARK 200 R MERGE (I) : 0.12000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.42 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.56 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.5 REMARK 200 DATA REDUNDANCY IN SHELL : 3.90 REMARK 200 R MERGE FOR SHELL (I) : 0.72000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: REFMAC REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 37.50 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.97 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: A NATIVE CRYSTAL (20 MG/ML, 16% [W/V] REMARK 280 PEG3000, 100 MM MES PH 6.1, 5 MM DTT) SOAKED WITH 0.5 MM DATP, 2 REMARK 280 MM CTP, 10 MM MGCL2 AND 20% (V/V) PEG400. REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 47.25450 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 10920 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 40980 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -79.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ARG A 48 REMARK 465 GLY A 49 REMARK 465 ILE A 50 REMARK 465 ILE A 51 REMARK 465 GLU A 52 REMARK 465 SER A 53 REMARK 465 THR A 54 REMARK 465 ILE A 55 REMARK 465 ASP A 56 REMARK 465 ALA A 57 REMARK 465 ASN A 58 REMARK 465 ALA A 59 REMARK 465 ASN A 60 REMARK 465 VAL A 61 REMARK 465 ARG A 62 REMARK 465 VAL A 63 REMARK 465 ARG A 331 REMARK 465 LEU A 332 REMARK 465 THR A 333 REMARK 465 SER A 334 REMARK 465 SER A 335 REMARK 465 THR A 336 REMARK 465 GLN A 337 REMARK 465 THR A 338 REMARK 465 LEU A 339 REMARK 465 LYS A 340 REMARK 465 LYS A 341 REMARK 465 PHE A 342 REMARK 465 SER A 343 REMARK 465 LEU A 344 REMARK 465 SER A 345 REMARK 465 SER A 346 REMARK 465 GLU A 347 REMARK 465 GLU A 348 REMARK 465 GLU A 349 REMARK 465 GLY A 561 REMARK 465 GLU A 562 REMARK 465 SER A 563 REMARK 465 PHE A 564 REMARK 465 ARG A 634 REMARK 465 GLU A 635 REMARK 465 ILE A 636 REMARK 465 GLU A 637 REMARK 465 TYR A 638 REMARK 465 PRO A 639 REMARK 465 ARG A 640 REMARK 465 ARG A 641 REMARK 465 GLN A 642 REMARK 465 PHE A 643 REMARK 465 TYR A 644 REMARK 465 ASP A 645 REMARK 465 SER A 646 REMARK 465 LEU A 647 REMARK 465 THR A 648 REMARK 465 ILE A 649 REMARK 465 ARG A 650 REMARK 465 ARG A 651 REMARK 465 ILE B 50 REMARK 465 ILE B 51 REMARK 465 GLU B 52 REMARK 465 SER B 53 REMARK 465 THR B 54 REMARK 465 ILE B 55 REMARK 465 ASP B 56 REMARK 465 ALA B 57 REMARK 465 ASN B 58 REMARK 465 ALA B 59 REMARK 465 ASN B 60 REMARK 465 VAL B 61 REMARK 465 ARG B 62 REMARK 465 VAL B 63 REMARK 465 CYS B 330 REMARK 465 ARG B 331 REMARK 465 LEU B 332 REMARK 465 THR B 333 REMARK 465 SER B 334 REMARK 465 SER B 335 REMARK 465 THR B 336 REMARK 465 GLN B 337 REMARK 465 THR B 338 REMARK 465 LEU B 339 REMARK 465 LYS B 340 REMARK 465 LYS B 341 REMARK 465 PHE B 342 REMARK 465 SER B 343 REMARK 465 LEU B 344 REMARK 465 SER B 345 REMARK 465 SER B 346 REMARK 465 GLU B 347 REMARK 465 GLU B 348 REMARK 465 GLU B 349 REMARK 465 GLY B 561 REMARK 465 GLU B 562 REMARK 465 TYR B 638 REMARK 465 PRO B 639 REMARK 465 ARG B 640 REMARK 465 ARG B 641 REMARK 465 GLN B 642 REMARK 465 PHE B 643 REMARK 465 TYR B 644 REMARK 465 ASP B 645 REMARK 465 SER B 646 REMARK 465 LEU B 647 REMARK 465 THR B 648 REMARK 465 ILE B 649 REMARK 465 ARG B 650 REMARK 465 ARG B 651 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HIS B 114 NZ LYS B 370 2.05 REMARK 500 NZ LYS A 2 OE1 GLN B 4 2.07 REMARK 500 OE1 GLN A 4 NZ LYS B 2 2.07 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OD1 ASP A 293 NZ LYS B 295 1656 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 6 65.63 -67.09 REMARK 500 LEU A 121 -49.35 -134.74 REMARK 500 TYR A 124 -71.09 -96.09 REMARK 500 PRO A 219 65.04 -69.93 REMARK 500 THR A 222 -71.35 65.85 REMARK 500 ASP A 298 73.11 -103.44 REMARK 500 THR A 454 -169.43 -161.56 REMARK 500 ASP A 456 -153.02 -148.93 REMARK 500 PHE A 514 -7.42 -146.66 REMARK 500 ARG B 48 40.99 -109.18 REMARK 500 TYR B 124 -68.53 -90.12 REMARK 500 PRO B 219 66.84 -68.71 REMARK 500 THR B 222 -75.95 65.14 REMARK 500 PHE B 242 30.65 -95.74 REMARK 500 ASP B 298 76.64 -118.31 REMARK 500 ASN B 533 97.30 -65.90 REMARK 500 ILE B 636 44.40 -143.46 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 655 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLN A 207 OE1 REMARK 620 2 GLN A 210 OE1 92.3 REMARK 620 3 DTP A 654 O1A 94.4 103.5 REMARK 620 4 DTP A 654 O1G 104.1 154.7 94.4 REMARK 620 5 DTP A 654 O2B 174.5 87.8 90.8 74.0 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 652 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 594 SG REMARK 620 2 HIS A 598 ND1 109.7 REMARK 620 3 CYS A 605 SG 124.3 89.8 REMARK 620 4 CYS A 608 SG 119.3 102.4 105.3 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 655 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLN B 207 OE1 REMARK 620 2 GLN B 210 OE1 97.5 REMARK 620 3 DTP B 654 O2G 100.5 157.4 REMARK 620 4 DTP B 654 O2B 171.5 85.9 78.2 REMARK 620 5 DTP B 654 O2A 91.9 103.8 89.2 79.7 REMARK 620 6 HOH B2035 O 77.9 98.9 72.0 109.4 156.2 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 652 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 594 SG REMARK 620 2 HIS B 598 ND1 119.8 REMARK 620 3 CYS B 605 SG 127.0 93.7 REMARK 620 4 CYS B 608 SG 106.5 106.8 100.3 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 652 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CTP A 653 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DTP A 654 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 655 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 652 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CTP B 653 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DTP B 654 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG B 655 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4COI RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE ANAEROBIC RIBONUCLEOTIDE REDUCTASE FROM REMARK 900 THERMOTOGA MARITIMA WITH GLYCEROL IN THE ACTIVE SITE REMARK 900 RELATED ID: 4COL RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE ANAEROBIC RIBONUCLEOTIDE REDUCTASE FROM REMARK 900 THERMOTOGA MARITIMA WITH DATP BOUND IN THE SPECIFICITY SITE REMARK 900 RELATED ID: 4COM RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE ANAEROBIC RIBONUCLEOTIDE REDUCTASE FROM REMARK 900 THERMOTOGA MARITIMA WITH MES IN THE ACTIVE SITE REMARK 900 RELATED ID: 4CON RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE ANAEROBIC RIBONUCLEOTIDE REDUCTASE FROM REMARK 900 THERMOTOGA MARITIMA WITH CITRATE IN THE ACTIVE SITE DBREF 4COJ A 1 651 UNP Q9WYL6 Q9WYL6_THEMA 1 651 DBREF 4COJ B 1 651 UNP Q9WYL6 Q9WYL6_THEMA 1 651 SEQRES 1 A 651 MET LYS VAL GLN TYR SER PHE GLU ARG GLU PHE GLU GLU SEQRES 2 A 651 LEU MET SER ASP LEU LEU SER LYS TYR GLY TYR GLU MET SEQRES 3 A 651 PHE GLN MET ASP GLY LEU GLY ASP GLN LEU ASP VAL VAL SEQRES 4 A 651 LYS PHE THR GLU ASP PHE VAL ARG ARG GLY ILE ILE GLU SEQRES 5 A 651 SER THR ILE ASP ALA ASN ALA ASN VAL ARG VAL THR ASN SEQRES 6 A 651 ILE SER THR TYR PHE ILE GLU ILE SER LYS PRO HIS THR SEQRES 7 A 651 TYR LEU TYR SER LEU TYR ARG ILE TRP GLN LYS MET LYS SEQRES 8 A 651 GLU MET PHE GLY LYS GLY VAL ALA ASP GLU PHE VAL GLU SEQRES 9 A 651 ALA GLN ILE ASN GLY ALA VAL TYR LEU HIS ASP ARG HIS SEQRES 10 A 651 HIS ALA ALA LEU MET PRO TYR CYS PHE ALA TYR THR LEU SEQRES 11 A 651 LYS PRO ILE VAL GLU LYS GLY LEU PRO PHE ILE LYS THR SEQRES 12 A 651 ILE LYS SER GLU PRO ALA LYS HIS LEU SER THR PHE ILE SEQRES 13 A 651 GLN HIS VAL ILE GLN PHE VAL MET PHE ALA SER ASN GLN SEQRES 14 A 651 SER SER GLY ALA VAL GLY LEU PRO ASP PHE PHE VAL TRP SEQRES 15 A 651 MET TRP TYR PHE VAL LYS LYS ASP LEU LYS GLU GLY ILE SEQRES 16 A 651 ILE PRO ARG ASP LYS LEU ASP TRP TYR ILE GLU GLN HIS SEQRES 17 A 651 PHE GLN ILE LEU THR TYR SER LEU ASN GLN PRO ILE ARG SEQRES 18 A 651 THR THR GLN SER PRO TYR THR ASN PHE THR TYR LEU ASP SEQRES 19 A 651 ARG ASN TYR ILE LYS ALA ILE PHE GLU GLY GLU ARG TYR SEQRES 20 A 651 PRO ASP GLY SER LEU ILE THR ASP HIS VAL GLU ASP ILE SEQRES 21 A 651 ILE ALA LEU GLN LYS HIS TYR TRP GLU TRP VAL SER ARG SEQRES 22 A 651 GLU ARG GLU ARG GLN MET PHE THR PHE PRO VAL LEU THR SEQRES 23 A 651 ALA SER LEU LEU TYR LYS ASP GLY LYS PHE LEU ASP GLU SEQRES 24 A 651 ASP SER ALA ARG PHE ILE ASN LYS ILE ASN MET LYS TRP SEQRES 25 A 651 GLN ASP THR ASN TRP TYR ILE SER ASP SER ILE ASP ALA SEQRES 26 A 651 VAL ALA SER CYS CYS ARG LEU THR SER SER THR GLN THR SEQRES 27 A 651 LEU LYS LYS PHE SER LEU SER SER GLU GLU GLU GLU LYS SEQRES 28 A 651 LEU LYS GLY ARG MET ASN SER ILE GLY GLY SER ASP LEU SEQRES 29 A 651 ASN ILE GLY SER PHE LYS VAL ILE THR VAL ASN LEU PRO SEQRES 30 A 651 ARG ILE ALA LEU GLU SER GLY GLY ASP ARG GLU LYS TYR SEQRES 31 A 651 LEU GLN ILE LEU ARG HIS ARG VAL GLN LEU ILE LYS LYS SEQRES 32 A 651 ALA LEU ALA ALA VAL ARG GLU ILE ILE LYS GLU ARG ILE SEQRES 33 A 651 SER GLU GLY LEU LEU PRO LEU TYR GLU ASN GLY LEU MET SEQRES 34 A 651 LEU LEU ASN ARG GLN TYR GLY THR ILE GLY VAL THR GLY SEQRES 35 A 651 VAL TRP GLU SER ALA SER ILE MET GLY LEU THR THR GLU SEQRES 36 A 651 ASP ILE ASP GLY LEU LYS TYR THR GLU GLU GLY GLU VAL SEQRES 37 A 651 PHE VAL ASP ASN VAL LEU ASP THR ILE ARG GLU GLU ALA SEQRES 38 A 651 GLU LYS GLY TYR HIS GLU TYR GLY PHE THR PHE ASN ILE SEQRES 39 A 651 GLU GLN VAL PRO ALA GLU LYS ALA ALA VAL THR LEU ALA SEQRES 40 A 651 GLN LYS ASP ARG PHE LEU PHE GLY GLU LYS GLN PRO PHE SEQRES 41 A 651 GLU ILE TYR SER ASN GLN TRP VAL PRO LEU MET ALA ASN SEQRES 42 A 651 THR ASP VAL LEU ASN ARG ILE ARG TYR SER GLY LYS TRP SEQRES 43 A 651 ASP LYS LYS VAL SER GLY GLY ALA ILE LEU HIS ILE ASN SEQRES 44 A 651 LEU GLY GLU SER PHE LYS THR GLU GLU GLU SER PHE ASN SEQRES 45 A 651 MET VAL LYS MET ILE ALA ASP MET GLY VAL MET TYR PHE SEQRES 46 A 651 ALA PHE ASN THR LYS ILE SER VAL CYS GLU ASP GLY HIS SEQRES 47 A 651 ALA PHE TYR GLY GLU ARG CYS PRO VAL CYS GLY LYS ALA SEQRES 48 A 651 LYS VAL ASP GLU TYR MET ARG ILE VAL GLY TYR LEU VAL SEQRES 49 A 651 PRO VAL SER ALA PHE ASN LYS GLU ARG ARG GLU ILE GLU SEQRES 50 A 651 TYR PRO ARG ARG GLN PHE TYR ASP SER LEU THR ILE ARG SEQRES 51 A 651 ARG SEQRES 1 B 651 MET LYS VAL GLN TYR SER PHE GLU ARG GLU PHE GLU GLU SEQRES 2 B 651 LEU MET SER ASP LEU LEU SER LYS TYR GLY TYR GLU MET SEQRES 3 B 651 PHE GLN MET ASP GLY LEU GLY ASP GLN LEU ASP VAL VAL SEQRES 4 B 651 LYS PHE THR GLU ASP PHE VAL ARG ARG GLY ILE ILE GLU SEQRES 5 B 651 SER THR ILE ASP ALA ASN ALA ASN VAL ARG VAL THR ASN SEQRES 6 B 651 ILE SER THR TYR PHE ILE GLU ILE SER LYS PRO HIS THR SEQRES 7 B 651 TYR LEU TYR SER LEU TYR ARG ILE TRP GLN LYS MET LYS SEQRES 8 B 651 GLU MET PHE GLY LYS GLY VAL ALA ASP GLU PHE VAL GLU SEQRES 9 B 651 ALA GLN ILE ASN GLY ALA VAL TYR LEU HIS ASP ARG HIS SEQRES 10 B 651 HIS ALA ALA LEU MET PRO TYR CYS PHE ALA TYR THR LEU SEQRES 11 B 651 LYS PRO ILE VAL GLU LYS GLY LEU PRO PHE ILE LYS THR SEQRES 12 B 651 ILE LYS SER GLU PRO ALA LYS HIS LEU SER THR PHE ILE SEQRES 13 B 651 GLN HIS VAL ILE GLN PHE VAL MET PHE ALA SER ASN GLN SEQRES 14 B 651 SER SER GLY ALA VAL GLY LEU PRO ASP PHE PHE VAL TRP SEQRES 15 B 651 MET TRP TYR PHE VAL LYS LYS ASP LEU LYS GLU GLY ILE SEQRES 16 B 651 ILE PRO ARG ASP LYS LEU ASP TRP TYR ILE GLU GLN HIS SEQRES 17 B 651 PHE GLN ILE LEU THR TYR SER LEU ASN GLN PRO ILE ARG SEQRES 18 B 651 THR THR GLN SER PRO TYR THR ASN PHE THR TYR LEU ASP SEQRES 19 B 651 ARG ASN TYR ILE LYS ALA ILE PHE GLU GLY GLU ARG TYR SEQRES 20 B 651 PRO ASP GLY SER LEU ILE THR ASP HIS VAL GLU ASP ILE SEQRES 21 B 651 ILE ALA LEU GLN LYS HIS TYR TRP GLU TRP VAL SER ARG SEQRES 22 B 651 GLU ARG GLU ARG GLN MET PHE THR PHE PRO VAL LEU THR SEQRES 23 B 651 ALA SER LEU LEU TYR LYS ASP GLY LYS PHE LEU ASP GLU SEQRES 24 B 651 ASP SER ALA ARG PHE ILE ASN LYS ILE ASN MET LYS TRP SEQRES 25 B 651 GLN ASP THR ASN TRP TYR ILE SER ASP SER ILE ASP ALA SEQRES 26 B 651 VAL ALA SER CYS CYS ARG LEU THR SER SER THR GLN THR SEQRES 27 B 651 LEU LYS LYS PHE SER LEU SER SER GLU GLU GLU GLU LYS SEQRES 28 B 651 LEU LYS GLY ARG MET ASN SER ILE GLY GLY SER ASP LEU SEQRES 29 B 651 ASN ILE GLY SER PHE LYS VAL ILE THR VAL ASN LEU PRO SEQRES 30 B 651 ARG ILE ALA LEU GLU SER GLY GLY ASP ARG GLU LYS TYR SEQRES 31 B 651 LEU GLN ILE LEU ARG HIS ARG VAL GLN LEU ILE LYS LYS SEQRES 32 B 651 ALA LEU ALA ALA VAL ARG GLU ILE ILE LYS GLU ARG ILE SEQRES 33 B 651 SER GLU GLY LEU LEU PRO LEU TYR GLU ASN GLY LEU MET SEQRES 34 B 651 LEU LEU ASN ARG GLN TYR GLY THR ILE GLY VAL THR GLY SEQRES 35 B 651 VAL TRP GLU SER ALA SER ILE MET GLY LEU THR THR GLU SEQRES 36 B 651 ASP ILE ASP GLY LEU LYS TYR THR GLU GLU GLY GLU VAL SEQRES 37 B 651 PHE VAL ASP ASN VAL LEU ASP THR ILE ARG GLU GLU ALA SEQRES 38 B 651 GLU LYS GLY TYR HIS GLU TYR GLY PHE THR PHE ASN ILE SEQRES 39 B 651 GLU GLN VAL PRO ALA GLU LYS ALA ALA VAL THR LEU ALA SEQRES 40 B 651 GLN LYS ASP ARG PHE LEU PHE GLY GLU LYS GLN PRO PHE SEQRES 41 B 651 GLU ILE TYR SER ASN GLN TRP VAL PRO LEU MET ALA ASN SEQRES 42 B 651 THR ASP VAL LEU ASN ARG ILE ARG TYR SER GLY LYS TRP SEQRES 43 B 651 ASP LYS LYS VAL SER GLY GLY ALA ILE LEU HIS ILE ASN SEQRES 44 B 651 LEU GLY GLU SER PHE LYS THR GLU GLU GLU SER PHE ASN SEQRES 45 B 651 MET VAL LYS MET ILE ALA ASP MET GLY VAL MET TYR PHE SEQRES 46 B 651 ALA PHE ASN THR LYS ILE SER VAL CYS GLU ASP GLY HIS SEQRES 47 B 651 ALA PHE TYR GLY GLU ARG CYS PRO VAL CYS GLY LYS ALA SEQRES 48 B 651 LYS VAL ASP GLU TYR MET ARG ILE VAL GLY TYR LEU VAL SEQRES 49 B 651 PRO VAL SER ALA PHE ASN LYS GLU ARG ARG GLU ILE GLU SEQRES 50 B 651 TYR PRO ARG ARG GLN PHE TYR ASP SER LEU THR ILE ARG SEQRES 51 B 651 ARG HET ZN A 652 1 HET CTP A 653 29 HET DTP A 654 30 HET MG A 655 1 HET ZN B 652 1 HET CTP B 653 29 HET DTP B 654 30 HET MG B 655 1 HETNAM ZN ZINC ION HETNAM CTP CYTIDINE-5'-TRIPHOSPHATE HETNAM DTP 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE HETNAM MG MAGNESIUM ION FORMUL 3 ZN 2(ZN 2+) FORMUL 4 CTP 2(C9 H16 N3 O14 P3) FORMUL 5 DTP 2(C10 H16 N5 O12 P3) FORMUL 6 MG 2(MG 2+) FORMUL 11 HOH *181(H2 O) HELIX 1 1 GLU A 8 GLY A 23 1 16 HELIX 2 2 GLY A 23 ASP A 30 1 8 HELIX 3 3 GLY A 33 LEU A 36 5 4 HELIX 4 4 ASP A 37 VAL A 46 1 10 HELIX 5 5 ILE A 66 SER A 74 1 9 HELIX 6 6 SER A 74 GLY A 95 1 22 HELIX 7 7 GLY A 95 ASN A 108 1 14 HELIX 8 8 LEU A 130 GLY A 137 1 8 HELIX 9 9 HIS A 151 ASN A 168 1 18 HELIX 10 10 ASP A 178 GLU A 193 1 16 HELIX 11 11 PRO A 197 ASP A 199 5 3 HELIX 12 12 LYS A 200 ASN A 217 1 18 HELIX 13 13 ASP A 234 PHE A 242 1 9 HELIX 14 14 ILE A 253 ASP A 255 5 3 HELIX 15 15 HIS A 256 ARG A 275 1 20 HELIX 16 16 ASP A 298 GLN A 313 1 16 HELIX 17 17 ILE A 323 ALA A 327 5 5 HELIX 18 18 LEU A 376 GLY A 384 1 9 HELIX 19 19 ASP A 386 GLU A 418 1 33 HELIX 20 20 LEU A 421 ASN A 426 1 6 HELIX 21 21 LEU A 430 ASN A 432 5 3 HELIX 22 22 GLY A 442 MET A 450 1 9 HELIX 23 23 THR A 463 GLY A 489 1 27 HELIX 24 24 LYS A 501 GLY A 515 1 15 HELIX 25 25 GLU A 516 GLN A 518 5 3 HELIX 26 26 ASP A 535 ASP A 547 1 13 HELIX 27 27 LYS A 548 SER A 551 5 4 HELIX 28 28 THR A 566 GLY A 581 1 16 HELIX 29 29 VAL A 626 ARG A 633 1 8 HELIX 30 30 GLU B 8 GLY B 23 1 16 HELIX 31 31 GLY B 23 GLY B 31 1 9 HELIX 32 32 GLY B 33 LEU B 36 5 4 HELIX 33 33 ASP B 37 ARG B 47 1 11 HELIX 34 34 ASN B 65 ILE B 73 1 9 HELIX 35 35 SER B 74 GLY B 95 1 22 HELIX 36 36 GLY B 95 ASN B 108 1 14 HELIX 37 37 LEU B 130 GLY B 137 1 8 HELIX 38 38 HIS B 151 ASN B 168 1 18 HELIX 39 39 ASP B 178 GLU B 193 1 16 HELIX 40 40 PRO B 197 ASP B 199 5 3 HELIX 41 41 LYS B 200 LEU B 216 1 17 HELIX 42 42 ASP B 234 PHE B 242 1 9 HELIX 43 43 ILE B 253 ASP B 255 5 3 HELIX 44 44 HIS B 256 ARG B 275 1 20 HELIX 45 45 ASP B 298 GLN B 313 1 16 HELIX 46 46 ILE B 323 ALA B 327 5 5 HELIX 47 47 LEU B 376 GLY B 384 1 9 HELIX 48 48 ASP B 386 GLU B 418 1 33 HELIX 49 49 LEU B 421 ASN B 426 1 6 HELIX 50 50 GLY B 442 GLY B 451 1 10 HELIX 51 51 THR B 463 GLY B 489 1 27 HELIX 52 52 LYS B 501 GLY B 515 1 15 HELIX 53 53 GLU B 516 GLN B 518 5 3 HELIX 54 54 ASP B 535 ASP B 547 1 13 HELIX 55 55 THR B 566 MET B 580 1 15 HELIX 56 56 VAL B 626 GLU B 635 1 10 SHEET 1 AA 2 LYS A 2 GLN A 4 0 SHEET 2 AA 2 LYS B 2 GLN B 4 -1 O VAL B 3 N VAL A 3 SHEET 1 AB 2 VAL A 111 LEU A 113 0 SHEET 2 AB 2 GLY A 367 ASN A 375 1 O THR A 373 N TYR A 112 SHEET 1 AC 2 LYS A 295 PHE A 296 0 SHEET 2 AC 2 VAL A 284 LYS A 292 -1 O LYS A 292 N LYS A 295 SHEET 1 AD 8 PHE A 492 GLN A 496 0 SHEET 2 AD 8 GLN A 434 THR A 441 1 O GLY A 436 N ASN A 493 SHEET 3 AD 8 GLY A 367 ASN A 375 1 O GLY A 367 N TYR A 435 SHEET 4 AD 8 CYS A 125 ALA A 127 -1 O CYS A 125 N SER A 368 SHEET 5 AD 8 VAL A 174 LEU A 176 1 N GLY A 175 O PHE A 126 SHEET 6 AD 8 THR A 228 LEU A 233 1 O ASN A 229 N LEU A 176 SHEET 7 AD 8 VAL A 284 LYS A 292 1 O VAL A 284 N PHE A 230 SHEET 8 AD 8 LYS A 295 PHE A 296 -1 O LYS A 295 N LYS A 292 SHEET 1 AE 4 PHE A 492 GLN A 496 0 SHEET 2 AE 4 GLN A 434 THR A 441 1 O GLY A 436 N ASN A 493 SHEET 3 AE 4 GLY A 367 ASN A 375 1 O GLY A 367 N TYR A 435 SHEET 4 AE 4 VAL A 111 LEU A 113 1 O TYR A 112 N THR A 373 SHEET 1 AF 5 LEU A 556 ASN A 559 0 SHEET 2 AF 5 TYR A 584 ASN A 588 1 O TYR A 584 N LEU A 556 SHEET 3 AF 5 THR A 315 SER A 320 -1 O TRP A 317 N PHE A 585 SHEET 4 AF 5 VAL A 284 LYS A 292 1 O LEU A 285 N ASN A 316 SHEET 5 AF 5 LYS A 295 PHE A 296 -1 O LYS A 295 N LYS A 292 SHEET 1 AG10 PHE A 492 GLN A 496 0 SHEET 2 AG10 GLN A 434 THR A 441 1 O GLY A 436 N ASN A 493 SHEET 3 AG10 GLY A 367 ASN A 375 1 O GLY A 367 N TYR A 435 SHEET 4 AG10 CYS A 125 ALA A 127 -1 O CYS A 125 N SER A 368 SHEET 5 AG10 VAL A 174 LEU A 176 1 N GLY A 175 O PHE A 126 SHEET 6 AG10 THR A 228 LEU A 233 1 O ASN A 229 N LEU A 176 SHEET 7 AG10 VAL A 284 LYS A 292 1 O VAL A 284 N PHE A 230 SHEET 8 AG10 THR A 315 SER A 320 1 O ASN A 316 N ALA A 287 SHEET 9 AG10 TYR A 584 ASN A 588 -1 O PHE A 585 N TRP A 317 SHEET 10 AG10 LEU A 556 ASN A 559 1 O LEU A 556 N ALA A 586 SHEET 1 AH10 LEU A 556 ASN A 559 0 SHEET 2 AH10 TYR A 584 ASN A 588 1 O TYR A 584 N LEU A 556 SHEET 3 AH10 THR A 315 SER A 320 -1 O TRP A 317 N PHE A 585 SHEET 4 AH10 VAL A 284 LYS A 292 1 O LEU A 285 N ASN A 316 SHEET 5 AH10 THR A 228 LEU A 233 1 O THR A 228 N VAL A 284 SHEET 6 AH10 VAL A 174 LEU A 176 1 O VAL A 174 N ASN A 229 SHEET 7 AH10 CYS A 125 ALA A 127 1 O PHE A 126 N GLY A 175 SHEET 8 AH10 GLY A 367 ASN A 375 -1 O SER A 368 N CYS A 125 SHEET 9 AH10 GLN A 434 THR A 441 1 O TYR A 435 N PHE A 369 SHEET 10 AH10 PHE A 492 GLN A 496 1 O ASN A 493 N ILE A 438 SHEET 1 AI 9 LEU A 556 ASN A 559 0 SHEET 2 AI 9 TYR A 584 ASN A 588 1 O TYR A 584 N LEU A 556 SHEET 3 AI 9 THR A 315 SER A 320 -1 O TRP A 317 N PHE A 585 SHEET 4 AI 9 VAL A 284 LYS A 292 1 O LEU A 285 N ASN A 316 SHEET 5 AI 9 THR A 228 LEU A 233 1 O THR A 228 N VAL A 284 SHEET 6 AI 9 VAL A 174 LEU A 176 1 O VAL A 174 N ASN A 229 SHEET 7 AI 9 CYS A 125 ALA A 127 1 O PHE A 126 N GLY A 175 SHEET 8 AI 9 GLY A 367 ASN A 375 -1 O SER A 368 N CYS A 125 SHEET 9 AI 9 VAL A 111 LEU A 113 1 O TYR A 112 N THR A 373 SHEET 1 AJ 2 THR A 453 ASP A 456 0 SHEET 2 AJ 2 GLY A 459 TYR A 462 -1 O GLY A 459 N ASP A 456 SHEET 1 AK 4 ALA A 599 PHE A 600 0 SHEET 2 AK 4 ILE A 591 VAL A 593 -1 O SER A 592 N PHE A 600 SHEET 3 AK 4 ASP A 614 ARG A 618 -1 O ASP A 614 N VAL A 593 SHEET 4 AK 4 LEU A 623 PRO A 625 -1 O VAL A 624 N MET A 617 SHEET 1 BA 2 VAL B 111 LEU B 113 0 SHEET 2 BA 2 GLY B 367 ASN B 375 1 O THR B 373 N TYR B 112 SHEET 1 BB10 PHE B 492 GLN B 496 0 SHEET 2 BB10 GLN B 434 THR B 441 1 O GLY B 436 N ASN B 493 SHEET 3 BB10 GLY B 367 ASN B 375 1 O GLY B 367 N TYR B 435 SHEET 4 BB10 CYS B 125 ALA B 127 -1 O CYS B 125 N SER B 368 SHEET 5 BB10 VAL B 174 LEU B 176 1 N GLY B 175 O PHE B 126 SHEET 6 BB10 THR B 228 LEU B 233 1 O ASN B 229 N LEU B 176 SHEET 7 BB10 VAL B 284 LEU B 290 1 O VAL B 284 N PHE B 230 SHEET 8 BB10 THR B 315 SER B 320 1 O ASN B 316 N ALA B 287 SHEET 9 BB10 TYR B 584 ASN B 588 -1 O PHE B 585 N TRP B 317 SHEET 10 BB10 LEU B 556 ASN B 559 1 O LEU B 556 N ALA B 586 SHEET 1 BC 4 PHE B 492 GLN B 496 0 SHEET 2 BC 4 GLN B 434 THR B 441 1 O GLY B 436 N ASN B 493 SHEET 3 BC 4 GLY B 367 ASN B 375 1 O GLY B 367 N TYR B 435 SHEET 4 BC 4 VAL B 111 LEU B 113 1 O TYR B 112 N THR B 373 SHEET 1 BD 2 THR B 453 ASP B 456 0 SHEET 2 BD 2 GLY B 459 TYR B 462 -1 O GLY B 459 N ASP B 456 SHEET 1 BE 4 ALA B 599 PHE B 600 0 SHEET 2 BE 4 ILE B 591 VAL B 593 -1 O SER B 592 N PHE B 600 SHEET 3 BE 4 ASP B 614 ARG B 618 -1 O ASP B 614 N VAL B 593 SHEET 4 BE 4 LEU B 623 PRO B 625 -1 O VAL B 624 N MET B 617 LINK OE1 GLN A 207 MG MG A 655 1555 1555 2.13 LINK OE1 GLN A 210 MG MG A 655 1555 1555 2.06 LINK SG CYS A 594 ZN ZN A 652 1555 1555 2.30 LINK ND1 HIS A 598 ZN ZN A 652 1555 1555 2.02 LINK SG CYS A 605 ZN ZN A 652 1555 1555 2.39 LINK SG CYS A 608 ZN ZN A 652 1555 1555 2.29 LINK O1A DTP A 654 MG MG A 655 1555 1555 2.20 LINK O1G DTP A 654 MG MG A 655 1555 1555 2.11 LINK O2B DTP A 654 MG MG A 655 1555 1555 1.87 LINK OE1 GLN B 207 MG MG B 655 1555 1555 2.18 LINK OE1 GLN B 210 MG MG B 655 1555 1555 1.97 LINK SG CYS B 594 ZN ZN B 652 1555 1555 2.28 LINK ND1 HIS B 598 ZN ZN B 652 1555 1555 2.02 LINK SG CYS B 605 ZN ZN B 652 1555 1555 2.32 LINK SG CYS B 608 ZN ZN B 652 1555 1555 2.25 LINK O2G DTP B 654 MG MG B 655 1555 1555 1.90 LINK O2B DTP B 654 MG MG B 655 1555 1555 1.81 LINK O2A DTP B 654 MG MG B 655 1555 1555 2.15 LINK MG MG B 655 O HOH B2035 1555 1555 2.56 CISPEP 1 PHE A 282 PRO A 283 0 -4.50 CISPEP 2 PHE B 282 PRO B 283 0 -3.30 SITE 1 AC1 4 CYS A 594 HIS A 598 CYS A 605 CYS A 608 SITE 1 AC2 22 TYR A 112 HIS A 114 ASP A 115 TYR A 124 SITE 2 AC2 22 SER A 171 ALA A 173 ARG A 221 GLN A 224 SITE 3 AC2 22 TYR A 227 SER A 358 ILE A 359 PRO A 498 SITE 4 AC2 22 ALA A 499 GLU A 500 LYS A 501 ALA A 502 SITE 5 AC2 22 TYR A 622 HOH A2012 HOH A2013 HOH A2014 SITE 6 AC2 22 HOH A2015 HOH A2085 SITE 1 AC3 16 TRP A 203 GLN A 207 GLN A 210 ILE A 211 SITE 2 AC3 16 TYR A 214 SER A 215 GLN A 218 MG A 655 SITE 3 AC3 16 SER B 146 GLU B 147 ALA B 149 LYS B 150 SITE 4 AC3 16 HIS B 151 THR B 154 GLN B 157 HIS B 158 SITE 1 AC4 3 GLN A 207 GLN A 210 DTP A 654 SITE 1 AC5 4 CYS B 594 HIS B 598 CYS B 605 CYS B 608 SITE 1 AC6 25 TYR B 112 HIS B 114 ASP B 115 TYR B 124 SITE 2 AC6 25 SER B 171 GLY B 172 ALA B 173 ARG B 221 SITE 3 AC6 25 GLN B 224 TYR B 227 SER B 358 ILE B 359 SITE 4 AC6 25 PRO B 498 ALA B 499 GLU B 500 LYS B 501 SITE 5 AC6 25 ALA B 502 TYR B 622 HOH B2007 HOH B2008 SITE 6 AC6 25 HOH B2009 HOH B2010 HOH B2011 HOH B2014 SITE 7 AC6 25 HOH B2077 SITE 1 AC7 17 SER A 146 GLU A 147 LYS A 150 HIS A 151 SITE 2 AC7 17 THR A 154 GLN A 157 HIS A 158 GLN A 161 SITE 3 AC7 17 TRP B 203 GLN B 207 GLN B 210 ILE B 211 SITE 4 AC7 17 TYR B 214 SER B 215 GLN B 218 MG B 655 SITE 5 AC7 17 HOH B2035 SITE 1 AC8 4 GLN B 207 GLN B 210 DTP B 654 HOH B2035 CRYST1 77.983 94.509 87.068 90.00 112.09 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012823 0.000000 0.005204 0.00000 SCALE2 0.000000 0.010581 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012395 0.00000 MTRIX1 1 0.672600 -0.001583 -0.740000 22.89000 1 MTRIX2 1 -0.001810 -1.000000 0.000495 7.60300 1 MTRIX3 1 -0.740000 0.001007 -0.672600 51.80000 1