HEADER LYASE 29-JAN-14 4COK TITLE FUNCTIONAL AND STRUCTURAL CHARACTERIZATION OF PYRUVATE DECARBOXYLASE TITLE 2 FROM GLUCONOACETOBACTER DIAZOTROPHICUS COMPND MOL_ID: 1; COMPND 2 MOLECULE: PYRUVATE DECARBOXYLASE; COMPND 3 CHAIN: A, B; COMPND 4 EC: 4.1.1.1; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: GLUCONACETOBACTER DIAZOTROPHICUS PAL 5; SOURCE 3 ORGANISM_TAXID: 272568; SOURCE 4 ATCC: ATCC 49037; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_VECTOR: PET28A; SOURCE 10 OTHER_DETAILS: AMERICAN TYPE CULTURE COLLECTION KEYWDS LYASE EXPDTA X-RAY DIFFRACTION AUTHOR L.J.VANZYL,W.-D.SCHUBERT,M.TUFFIN,D.A.COWAN REVDAT 3 20-DEC-23 4COK 1 REMARK LINK REVDAT 2 08-APR-15 4COK 1 JRNL REVDAT 1 01-OCT-14 4COK 0 JRNL AUTH L.J.VAN ZYL,W.SCHUBERT,M.I.TUFFIN,D.A.COWAN JRNL TITL STRUCTURE AND FUNCTIONAL CHARACTERIZATION OF PYRUVATE JRNL TITL 2 DECARBOXYLASE FROM GLUCONACETOBACTER DIAZOTROPHICUS. JRNL REF BMC STRUCT.BIOL. V. 14 21 2014 JRNL REFN ESSN 1472-6807 JRNL PMID 25369873 JRNL DOI 10.1186/S12900-014-0021-1 REMARK 2 REMARK 2 RESOLUTION. 1.69 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0109 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.69 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 84.06 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 3 NUMBER OF REFLECTIONS : 138948 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.133 REMARK 3 R VALUE (WORKING SET) : 0.132 REMARK 3 FREE R VALUE : 0.163 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 7314 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.69 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.73 REMARK 3 REFLECTION IN BIN (WORKING SET) : 10272 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.59 REMARK 3 BIN R VALUE (WORKING SET) : 0.2400 REMARK 3 BIN FREE R VALUE SET COUNT : 547 REMARK 3 BIN FREE R VALUE : 0.2810 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 8182 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 64 REMARK 3 SOLVENT ATOMS : 1167 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 14.50 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 15.30 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.78000 REMARK 3 B22 (A**2) : -0.16000 REMARK 3 B33 (A**2) : -0.19000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.36000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.071 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.075 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.045 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.353 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.974 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.962 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 8922 ; 0.033 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 12253 ; 2.499 ; 1.950 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 1228 ; 5.976 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 411 ;36.752 ;23.577 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1397 ;13.902 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 75 ;17.610 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1365 ; 0.234 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 7001 ; 0.015 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 5653 ; 1.493 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 9057 ; 2.314 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 3269 ; 3.582 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 3129 ; 5.456 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. U VALUES REFINED INDIVIDUALLY REMARK 4 REMARK 4 4COK COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 29-JAN-14. REMARK 100 THE DEPOSITION ID IS D_1290059550. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-JUL-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SOLEIL REMARK 200 BEAMLINE : PROXIMA 1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.980 REMARK 200 MONOCHROMATOR : CHANNEL CUT CRYOGENICALLY COOLED REMARK 200 MONOCHROMATOR CRYSTAL REMARK 200 OPTICS : KIRKPATRICK-BAEZ PAIR OF BI REMARK 200 -MORPH MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 146324 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.690 REMARK 200 RESOLUTION RANGE LOW (A) : 45.800 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : 3.000 REMARK 200 R MERGE (I) : 0.08000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 6.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.69 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.78 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.7 REMARK 200 DATA REDUNDANCY IN SHELL : 2.80 REMARK 200 R MERGE FOR SHELL (I) : 0.28000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 2VBI REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 57.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.90 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: BATCH CRYSTALLIZATION FROM 200 MM REMARK 280 SODIUM CITRATE PH 6.0, 1 MM THDP, 1 MM MGCL2. PROTEIN REMARK 280 CONCENTRATION WAS 4 MG/ML AND CRYSTALS APPEARED AFTER 4 DAYS. REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 64.53500 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 70.48000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 64.53500 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 70.48000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 25430 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 62310 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -230.2 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 53.24046 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 -73.87406 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH B2136 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LEU A 184 REMARK 465 LEU A 185 REMARK 465 SER A 186 REMARK 465 PRO A 187 REMARK 465 PRO A 188 REMARK 465 ALA A 189 REMARK 465 ARG A 556 REMARK 465 ALA A 557 REMARK 465 GLY A 558 REMARK 465 LEU B 184 REMARK 465 LEU B 185 REMARK 465 SER B 186 REMARK 465 PRO B 187 REMARK 465 PRO B 188 REMARK 465 ALA B 189 REMARK 465 PRO B 190 REMARK 465 ALA B 557 REMARK 465 GLY B 558 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 PRO A 190 N CA CB CG CD REMARK 470 PRO A 554 CG CD REMARK 470 PRO B 554 CG CD REMARK 470 ARG B 556 CB CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 2141 O HOH A 2375 1.93 REMARK 500 OE1 GLU A 308 O HOH A 2391 2.05 REMARK 500 O HOH A 2491 O HOH A 2493 2.06 REMARK 500 OE1 GLU B 490 O HOH B 2477 2.08 REMARK 500 OE2 GLU B 469 O HOH A 2034 2.10 REMARK 500 O HOH A 2180 O HOH A 2187 2.12 REMARK 500 O HOH B 2445 O HOH B 2446 2.16 REMARK 500 O ASP B 182 O HOH B 2188 2.17 REMARK 500 O HOH A 2390 O HOH A 2391 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 2134 O HOH B 2106 2554 2.07 REMARK 500 O HOH A 2125 O HOH B 2106 2554 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 PHE A 81 CD1 PHE A 81 CE1 0.139 REMARK 500 GLU A 142 CG GLU A 142 CD 0.096 REMARK 500 GLU A 165 CG GLU A 165 CD 0.121 REMARK 500 VAL A 216 CB VAL A 216 CG2 0.127 REMARK 500 CYS A 282 CB CYS A 282 SG -0.119 REMARK 500 PHE A 327 CE1 PHE A 327 CZ 0.118 REMARK 500 TRP A 408 CZ3 TRP A 408 CH2 0.110 REMARK 500 GLU A 445 CB GLU A 445 CG 0.130 REMARK 500 TYR A 466 CD1 TYR A 466 CE1 0.098 REMARK 500 GLU A 490 CB GLU A 490 CG 0.132 REMARK 500 GLU A 490 CG GLU A 490 CD 0.165 REMARK 500 GLU A 490 CD GLU A 490 OE1 0.070 REMARK 500 GLU A 490 CD GLU A 490 OE2 0.147 REMARK 500 ALA A 513 CA ALA A 513 CB 0.131 REMARK 500 TYR B 8 CE1 TYR B 8 CZ 0.088 REMARK 500 SER B 74 CB SER B 74 OG -0.124 REMARK 500 PHE B 81 CD1 PHE B 81 CE1 0.145 REMARK 500 ALA B 83 CA ALA B 83 CB 0.150 REMARK 500 GLU B 142 CG GLU B 142 CD 0.128 REMARK 500 VAL B 216 CB VAL B 216 CG2 0.132 REMARK 500 TYR B 257 CZ TYR B 257 CE2 0.081 REMARK 500 CYS B 282 CB CYS B 282 SG -0.110 REMARK 500 TRP B 298 CE3 TRP B 298 CZ3 0.119 REMARK 500 GLU B 490 CG GLU B 490 CD 0.101 REMARK 500 ALA B 511 CA ALA B 511 CB 0.135 REMARK 500 GLU B 515 CG GLU B 515 CD 0.138 REMARK 500 GLU B 515 CD GLU B 515 OE2 0.078 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 27 CB - CG - OD2 ANGL. DEV. = -6.5 DEGREES REMARK 500 ARG A 62 NE - CZ - NH2 ANGL. DEV. = -4.3 DEGREES REMARK 500 ASP A 105 CB - CG - OD2 ANGL. DEV. = 5.5 DEGREES REMARK 500 ASP A 200 CB - CG - OD2 ANGL. DEV. = -6.1 DEGREES REMARK 500 ARG A 330 NE - CZ - NH2 ANGL. DEV. = -4.4 DEGREES REMARK 500 ARG A 343 NE - CZ - NH2 ANGL. DEV. = -3.1 DEGREES REMARK 500 TYR A 347 CB - CG - CD2 ANGL. DEV. = -4.0 DEGREES REMARK 500 ARG A 377 NE - CZ - NH2 ANGL. DEV. = -3.5 DEGREES REMARK 500 ARG A 428 NE - CZ - NH2 ANGL. DEV. = -3.4 DEGREES REMARK 500 ASP A 436 CB - CG - OD1 ANGL. DEV. = 7.1 DEGREES REMARK 500 ARG A 451 NE - CZ - NH2 ANGL. DEV. = -3.3 DEGREES REMARK 500 MET A 471 CG - SD - CE ANGL. DEV. = 12.3 DEGREES REMARK 500 ASP A 532 CB - CG - OD1 ANGL. DEV. = 5.6 DEGREES REMARK 500 ARG A 553 NE - CZ - NH2 ANGL. DEV. = -3.1 DEGREES REMARK 500 PRO A 554 N - CA - CB ANGL. DEV. = 9.8 DEGREES REMARK 500 ARG B 7 NE - CZ - NH2 ANGL. DEV. = -3.2 DEGREES REMARK 500 ARG B 62 NE - CZ - NH2 ANGL. DEV. = -3.0 DEGREES REMARK 500 PHE B 81 CB - CG - CD2 ANGL. DEV. = -4.5 DEGREES REMARK 500 TYR B 163 CB - CG - CD2 ANGL. DEV. = -4.1 DEGREES REMARK 500 TYR B 163 CZ - CE2 - CD2 ANGL. DEV. = -6.4 DEGREES REMARK 500 ARG B 177 NE - CZ - NH2 ANGL. DEV. = -4.0 DEGREES REMARK 500 ARG B 209 NE - CZ - NH1 ANGL. DEV. = 4.0 DEGREES REMARK 500 ARG B 309 NE - CZ - NH1 ANGL. DEV. = -3.8 DEGREES REMARK 500 ARG B 428 NE - CZ - NH2 ANGL. DEV. = -3.4 DEGREES REMARK 500 LEU B 454 CB - CG - CD1 ANGL. DEV. = -10.8 DEGREES REMARK 500 MET B 471 CG - SD - CE ANGL. DEV. = 12.2 DEGREES REMARK 500 ARG B 546 NE - CZ - NH1 ANGL. DEV. = -3.0 DEGREES REMARK 500 PRO B 554 N - CA - CB ANGL. DEV. = 9.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 74 -70.99 67.10 REMARK 500 SER A 74 -67.91 61.85 REMARK 500 SER A 248 -3.61 81.25 REMARK 500 TRP A 262 53.54 -154.45 REMARK 500 TRP A 298 84.15 -152.60 REMARK 500 THR A 442 11.37 -140.19 REMARK 500 HIS A 473 114.47 -176.61 REMARK 500 SER B 74 -71.24 71.00 REMARK 500 SER B 248 -7.35 84.30 REMARK 500 TRP B 262 55.11 -155.91 REMARK 500 HIS B 473 106.59 -177.94 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 601 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 436 OD1 REMARK 620 2 ASN A 463 OD1 91.6 REMARK 620 3 GLY A 465 O 95.2 87.9 REMARK 620 4 TPP A 600 O2B 171.9 93.4 91.3 REMARK 620 5 TPP A 600 O2A 87.7 175.9 88.2 87.7 REMARK 620 6 HOH A2515 O 87.3 89.3 176.2 86.4 94.7 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 601 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 436 OD1 REMARK 620 2 ASN B 463 OD1 90.5 REMARK 620 3 GLY B 465 O 98.2 90.7 REMARK 620 4 TPP B 600 O2A 88.8 178.6 88.2 REMARK 620 5 TPP B 600 O1B 171.1 91.8 90.4 89.1 REMARK 620 6 HOH B2437 O 85.4 86.5 175.5 94.7 86.1 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE TPP A 600 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE TPP B 600 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG B 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 1556 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 1557 DBREF 4COK A 1 558 UNP A9H275 A9H275_GLUDA 1 558 DBREF 4COK B 1 558 UNP A9H275 A9H275_GLUDA 1 558 SEQRES 1 A 558 MET THR TYR THR VAL GLY ARG TYR LEU ALA ASP ARG LEU SEQRES 2 A 558 ALA GLN ILE GLY LEU LYS HIS HIS PHE ALA VAL ALA GLY SEQRES 3 A 558 ASP TYR ASN LEU VAL LEU LEU ASP GLN LEU LEU LEU ASN SEQRES 4 A 558 THR ASP MET GLN GLN ILE TYR CYS SER ASN GLU LEU ASN SEQRES 5 A 558 CYS GLY PHE SER ALA GLU GLY TYR ALA ARG ALA ASN GLY SEQRES 6 A 558 ALA ALA ALA ALA ILE VAL THR PHE SER VAL GLY ALA LEU SEQRES 7 A 558 SER ALA PHE ASN ALA LEU GLY GLY ALA TYR ALA GLU ASN SEQRES 8 A 558 LEU PRO VAL ILE LEU ILE SER GLY ALA PRO ASN ALA ASN SEQRES 9 A 558 ASP HIS GLY THR GLY HIS ILE LEU HIS HIS THR LEU GLY SEQRES 10 A 558 THR THR ASP TYR GLY TYR GLN LEU GLU MET ALA ARG HIS SEQRES 11 A 558 ILE THR CYS ALA ALA GLU SER ILE VAL ALA ALA GLU ASP SEQRES 12 A 558 ALA PRO ALA LYS ILE ASP HIS VAL ILE ARG THR ALA LEU SEQRES 13 A 558 ARG GLU LYS LYS PRO ALA TYR LEU GLU ILE ALA CYS ASN SEQRES 14 A 558 VAL ALA GLY ALA PRO CYS VAL ARG PRO GLY GLY ILE ASP SEQRES 15 A 558 ALA LEU LEU SER PRO PRO ALA PRO ASP GLU ALA SER LEU SEQRES 16 A 558 LYS ALA ALA VAL ASP ALA ALA LEU ALA PHE ILE GLU GLN SEQRES 17 A 558 ARG GLY SER VAL THR MET LEU VAL GLY SER ARG ILE ARG SEQRES 18 A 558 ALA ALA GLY ALA GLN ALA GLN ALA VAL ALA LEU ALA ASP SEQRES 19 A 558 ALA LEU GLY CYS ALA VAL THR THR MET ALA ALA ALA LYS SEQRES 20 A 558 SER PHE PHE PRO GLU ASP HIS PRO GLY TYR ARG GLY HIS SEQRES 21 A 558 TYR TRP GLY GLU VAL SER SER PRO GLY ALA GLN GLN ALA SEQRES 22 A 558 VAL GLU GLY ALA ASP GLY VAL ILE CYS LEU ALA PRO VAL SEQRES 23 A 558 PHE ASN ASP TYR ALA THR VAL GLY TRP SER ALA TRP PRO SEQRES 24 A 558 LYS GLY ASP ASN VAL MET LEU VAL GLU ARG HIS ALA VAL SEQRES 25 A 558 THR VAL GLY GLY VAL ALA TYR ALA GLY ILE ASP MET ARG SEQRES 26 A 558 ASP PHE LEU THR ARG LEU ALA ALA HIS THR VAL ARG ARG SEQRES 27 A 558 ASP ALA THR ALA ARG GLY GLY ALA TYR VAL THR PRO GLN SEQRES 28 A 558 THR PRO ALA ALA ALA PRO THR ALA PRO LEU ASN ASN ALA SEQRES 29 A 558 GLU MET ALA ARG GLN ILE GLY ALA LEU LEU THR PRO ARG SEQRES 30 A 558 THR THR LEU THR ALA GLU THR GLY ASP SER TRP PHE ASN SEQRES 31 A 558 ALA VAL ARG MET LYS LEU PRO HIS GLY ALA ARG VAL GLU SEQRES 32 A 558 LEU GLU MET GLN TRP GLY HIS ILE GLY TRP SER VAL PRO SEQRES 33 A 558 ALA ALA PHE GLY ASN ALA LEU ALA ALA PRO GLU ARG GLN SEQRES 34 A 558 HIS VAL LEU MET VAL GLY ASP GLY SER PHE GLN LEU THR SEQRES 35 A 558 ALA GLN GLU VAL ALA GLN MET ILE ARG HIS ASP LEU PRO SEQRES 36 A 558 VAL ILE ILE PHE LEU ILE ASN ASN HIS GLY TYR THR ILE SEQRES 37 A 558 GLU VAL MET ILE HIS ASP GLY PRO TYR ASN ASN VAL LYS SEQRES 38 A 558 ASN TRP ASP TYR ALA GLY LEU MET GLU VAL PHE ASN ALA SEQRES 39 A 558 GLY GLU GLY ASN GLY LEU GLY LEU ARG ALA ARG THR GLY SEQRES 40 A 558 GLY GLU LEU ALA ALA ALA ILE GLU GLN ALA ARG ALA ASN SEQRES 41 A 558 ARG ASN GLY PRO THR LEU ILE GLU CYS THR LEU ASP ARG SEQRES 42 A 558 ASP ASP CYS THR GLN GLU LEU VAL THR TRP GLY LYS ARG SEQRES 43 A 558 VAL ALA ALA ALA ASN ALA ARG PRO PRO ARG ALA GLY SEQRES 1 B 558 MET THR TYR THR VAL GLY ARG TYR LEU ALA ASP ARG LEU SEQRES 2 B 558 ALA GLN ILE GLY LEU LYS HIS HIS PHE ALA VAL ALA GLY SEQRES 3 B 558 ASP TYR ASN LEU VAL LEU LEU ASP GLN LEU LEU LEU ASN SEQRES 4 B 558 THR ASP MET GLN GLN ILE TYR CYS SER ASN GLU LEU ASN SEQRES 5 B 558 CYS GLY PHE SER ALA GLU GLY TYR ALA ARG ALA ASN GLY SEQRES 6 B 558 ALA ALA ALA ALA ILE VAL THR PHE SER VAL GLY ALA LEU SEQRES 7 B 558 SER ALA PHE ASN ALA LEU GLY GLY ALA TYR ALA GLU ASN SEQRES 8 B 558 LEU PRO VAL ILE LEU ILE SER GLY ALA PRO ASN ALA ASN SEQRES 9 B 558 ASP HIS GLY THR GLY HIS ILE LEU HIS HIS THR LEU GLY SEQRES 10 B 558 THR THR ASP TYR GLY TYR GLN LEU GLU MET ALA ARG HIS SEQRES 11 B 558 ILE THR CYS ALA ALA GLU SER ILE VAL ALA ALA GLU ASP SEQRES 12 B 558 ALA PRO ALA LYS ILE ASP HIS VAL ILE ARG THR ALA LEU SEQRES 13 B 558 ARG GLU LYS LYS PRO ALA TYR LEU GLU ILE ALA CYS ASN SEQRES 14 B 558 VAL ALA GLY ALA PRO CYS VAL ARG PRO GLY GLY ILE ASP SEQRES 15 B 558 ALA LEU LEU SER PRO PRO ALA PRO ASP GLU ALA SER LEU SEQRES 16 B 558 LYS ALA ALA VAL ASP ALA ALA LEU ALA PHE ILE GLU GLN SEQRES 17 B 558 ARG GLY SER VAL THR MET LEU VAL GLY SER ARG ILE ARG SEQRES 18 B 558 ALA ALA GLY ALA GLN ALA GLN ALA VAL ALA LEU ALA ASP SEQRES 19 B 558 ALA LEU GLY CYS ALA VAL THR THR MET ALA ALA ALA LYS SEQRES 20 B 558 SER PHE PHE PRO GLU ASP HIS PRO GLY TYR ARG GLY HIS SEQRES 21 B 558 TYR TRP GLY GLU VAL SER SER PRO GLY ALA GLN GLN ALA SEQRES 22 B 558 VAL GLU GLY ALA ASP GLY VAL ILE CYS LEU ALA PRO VAL SEQRES 23 B 558 PHE ASN ASP TYR ALA THR VAL GLY TRP SER ALA TRP PRO SEQRES 24 B 558 LYS GLY ASP ASN VAL MET LEU VAL GLU ARG HIS ALA VAL SEQRES 25 B 558 THR VAL GLY GLY VAL ALA TYR ALA GLY ILE ASP MET ARG SEQRES 26 B 558 ASP PHE LEU THR ARG LEU ALA ALA HIS THR VAL ARG ARG SEQRES 27 B 558 ASP ALA THR ALA ARG GLY GLY ALA TYR VAL THR PRO GLN SEQRES 28 B 558 THR PRO ALA ALA ALA PRO THR ALA PRO LEU ASN ASN ALA SEQRES 29 B 558 GLU MET ALA ARG GLN ILE GLY ALA LEU LEU THR PRO ARG SEQRES 30 B 558 THR THR LEU THR ALA GLU THR GLY ASP SER TRP PHE ASN SEQRES 31 B 558 ALA VAL ARG MET LYS LEU PRO HIS GLY ALA ARG VAL GLU SEQRES 32 B 558 LEU GLU MET GLN TRP GLY HIS ILE GLY TRP SER VAL PRO SEQRES 33 B 558 ALA ALA PHE GLY ASN ALA LEU ALA ALA PRO GLU ARG GLN SEQRES 34 B 558 HIS VAL LEU MET VAL GLY ASP GLY SER PHE GLN LEU THR SEQRES 35 B 558 ALA GLN GLU VAL ALA GLN MET ILE ARG HIS ASP LEU PRO SEQRES 36 B 558 VAL ILE ILE PHE LEU ILE ASN ASN HIS GLY TYR THR ILE SEQRES 37 B 558 GLU VAL MET ILE HIS ASP GLY PRO TYR ASN ASN VAL LYS SEQRES 38 B 558 ASN TRP ASP TYR ALA GLY LEU MET GLU VAL PHE ASN ALA SEQRES 39 B 558 GLY GLU GLY ASN GLY LEU GLY LEU ARG ALA ARG THR GLY SEQRES 40 B 558 GLY GLU LEU ALA ALA ALA ILE GLU GLN ALA ARG ALA ASN SEQRES 41 B 558 ARG ASN GLY PRO THR LEU ILE GLU CYS THR LEU ASP ARG SEQRES 42 B 558 ASP ASP CYS THR GLN GLU LEU VAL THR TRP GLY LYS ARG SEQRES 43 B 558 VAL ALA ALA ALA ASN ALA ARG PRO PRO ARG ALA GLY HET TPP A 600 26 HET MG A 601 1 HET SO4 A1556 5 HET SO4 A1557 5 HET TPP B 600 26 HET MG B 601 1 HETNAM TPP THIAMINE DIPHOSPHATE HETNAM MG MAGNESIUM ION HETNAM SO4 SULFATE ION FORMUL 3 TPP 2(C12 H19 N4 O7 P2 S 1+) FORMUL 4 MG 2(MG 2+) FORMUL 5 SO4 2(O4 S 2-) FORMUL 9 HOH *1167(H2 O) HELIX 1 1 THR A 4 ILE A 16 1 13 HELIX 2 2 GLY A 26 TYR A 28 5 3 HELIX 3 3 ASN A 29 LEU A 37 1 9 HELIX 4 4 ASN A 49 GLY A 65 1 17 HELIX 5 5 GLY A 76 GLU A 90 1 15 HELIX 6 6 ASN A 102 HIS A 106 5 5 HELIX 7 7 GLY A 122 HIS A 130 1 9 HELIX 8 8 ALA A 140 GLU A 142 5 3 HELIX 9 9 ASP A 143 LYS A 159 1 17 HELIX 10 10 ASP A 191 GLN A 208 1 18 HELIX 11 11 ALA A 225 GLY A 237 1 13 HELIX 12 12 ALA A 245 LYS A 247 5 3 HELIX 13 13 TRP A 262 SER A 266 5 5 HELIX 14 14 GLY A 269 GLY A 276 1 8 HELIX 15 15 ASP A 323 THR A 335 1 13 HELIX 16 16 ASN A 362 LEU A 374 1 13 HELIX 17 17 GLY A 385 ARG A 393 1 9 HELIX 18 18 TRP A 413 ALA A 425 1 13 HELIX 19 19 ASP A 436 ALA A 443 1 8 HELIX 20 20 GLN A 444 HIS A 452 1 9 HELIX 21 21 TYR A 466 MET A 471 1 6 HELIX 22 22 GLY A 475 ASN A 479 5 5 HELIX 23 23 ASP A 484 ALA A 494 1 11 HELIX 24 24 THR A 506 ASN A 520 1 15 HELIX 25 25 THR A 537 ARG A 553 1 17 HELIX 26 26 THR B 4 ILE B 16 1 13 HELIX 27 27 GLY B 26 TYR B 28 5 3 HELIX 28 28 ASN B 29 LEU B 38 1 10 HELIX 29 29 ASN B 49 GLY B 65 1 17 HELIX 30 30 GLY B 76 GLU B 90 1 15 HELIX 31 31 ASN B 102 HIS B 106 5 5 HELIX 32 32 GLY B 122 HIS B 130 1 9 HELIX 33 33 ALA B 140 GLU B 142 5 3 HELIX 34 34 ASP B 143 LYS B 159 1 17 HELIX 35 35 ASP B 191 GLN B 208 1 18 HELIX 36 36 ALA B 225 GLY B 237 1 13 HELIX 37 37 ALA B 245 LYS B 247 5 3 HELIX 38 38 TRP B 262 SER B 266 5 5 HELIX 39 39 GLY B 269 GLY B 276 1 8 HELIX 40 40 ASP B 323 THR B 335 1 13 HELIX 41 41 ASN B 362 LEU B 374 1 13 HELIX 42 42 GLY B 385 ARG B 393 1 9 HELIX 43 43 TRP B 413 ALA B 425 1 13 HELIX 44 44 ASP B 436 ALA B 443 1 8 HELIX 45 45 GLN B 444 HIS B 452 1 9 HELIX 46 46 TYR B 466 MET B 471 1 6 HELIX 47 47 GLY B 475 ASN B 479 5 5 HELIX 48 48 ASP B 484 ALA B 494 1 11 HELIX 49 49 THR B 506 ASN B 520 1 15 HELIX 50 50 THR B 537 ARG B 553 1 17 SHEET 1 AA 6 GLN A 43 TYR A 46 0 SHEET 2 AA 6 HIS A 20 ALA A 23 1 O HIS A 21 N ILE A 45 SHEET 3 AA 6 ALA A 67 VAL A 71 1 O ALA A 68 N PHE A 22 SHEET 4 AA 6 VAL A 94 ALA A 100 1 O ILE A 95 N ALA A 69 SHEET 5 AA 6 ALA A 162 ALA A 167 1 O ALA A 162 N LEU A 96 SHEET 6 AA 6 ALA A 135 ILE A 138 1 O GLU A 136 N GLU A 165 SHEET 1 AB 7 TYR A 257 TYR A 261 0 SHEET 2 AB 7 ALA A 239 MET A 243 1 O VAL A 240 N ARG A 258 SHEET 3 AB 7 VAL A 212 VAL A 216 1 O VAL A 212 N ALA A 239 SHEET 4 AB 7 GLY A 279 LEU A 283 1 O GLY A 279 N THR A 213 SHEET 5 AB 7 VAL A 304 GLU A 308 1 O MET A 305 N CYS A 282 SHEET 6 AB 7 ALA A 311 VAL A 314 -1 O ALA A 311 N GLU A 308 SHEET 7 AB 7 VAL A 317 ALA A 320 -1 O VAL A 317 N VAL A 314 SHEET 1 AC 6 ARG A 401 GLU A 403 0 SHEET 2 AC 6 THR A 378 ALA A 382 1 O THR A 378 N ARG A 401 SHEET 3 AC 6 GLN A 429 GLY A 435 1 O GLN A 429 N THR A 379 SHEET 4 AC 6 ILE A 457 ASN A 462 1 O ILE A 457 N LEU A 432 SHEET 5 AC 6 THR A 525 THR A 530 1 O THR A 525 N ILE A 458 SHEET 6 AC 6 LEU A 500 ALA A 504 1 O LEU A 500 N LEU A 526 SHEET 1 BA 6 GLN B 43 TYR B 46 0 SHEET 2 BA 6 HIS B 20 ALA B 23 1 O HIS B 21 N ILE B 45 SHEET 3 BA 6 ALA B 67 VAL B 71 1 O ALA B 68 N PHE B 22 SHEET 4 BA 6 VAL B 94 ALA B 100 1 O ILE B 95 N ALA B 69 SHEET 5 BA 6 ALA B 162 ALA B 167 1 O ALA B 162 N LEU B 96 SHEET 6 BA 6 ALA B 135 ILE B 138 1 O GLU B 136 N GLU B 165 SHEET 1 BB 7 TYR B 257 TYR B 261 0 SHEET 2 BB 7 ALA B 239 MET B 243 1 O VAL B 240 N ARG B 258 SHEET 3 BB 7 VAL B 212 VAL B 216 1 O VAL B 212 N ALA B 239 SHEET 4 BB 7 GLY B 279 LEU B 283 1 O GLY B 279 N THR B 213 SHEET 5 BB 7 VAL B 304 GLU B 308 1 O MET B 305 N CYS B 282 SHEET 6 BB 7 ALA B 311 VAL B 314 -1 O ALA B 311 N GLU B 308 SHEET 7 BB 7 VAL B 317 ALA B 320 -1 O VAL B 317 N VAL B 314 SHEET 1 BC 6 ARG B 401 GLU B 403 0 SHEET 2 BC 6 THR B 378 ALA B 382 1 O THR B 378 N ARG B 401 SHEET 3 BC 6 GLN B 429 GLY B 435 1 O GLN B 429 N THR B 379 SHEET 4 BC 6 ILE B 457 ASN B 462 1 O ILE B 457 N LEU B 432 SHEET 5 BC 6 THR B 525 THR B 530 1 O THR B 525 N ILE B 458 SHEET 6 BC 6 LEU B 500 ALA B 504 1 O LEU B 500 N LEU B 526 LINK OD1 ASP A 436 MG MG A 601 1555 1555 2.04 LINK OD1 ASN A 463 MG MG A 601 1555 1555 2.10 LINK O GLY A 465 MG MG A 601 1555 1555 2.13 LINK O2B TPP A 600 MG MG A 601 1555 1555 2.06 LINK O2A TPP A 600 MG MG A 601 1555 1555 1.98 LINK MG MG A 601 O HOH A2515 1555 1555 2.08 LINK OD1 ASP B 436 MG MG B 601 1555 1555 2.04 LINK OD1 ASN B 463 MG MG B 601 1555 1555 2.05 LINK O GLY B 465 MG MG B 601 1555 1555 2.08 LINK O2A TPP B 600 MG MG B 601 1555 1555 2.02 LINK O1B TPP B 600 MG MG B 601 1555 1555 2.08 LINK MG MG B 601 O HOH B2437 1555 1555 2.16 SITE 1 AC1 26 GLY A 385 ASP A 386 GLY A 409 HIS A 410 SITE 2 AC1 26 ILE A 411 GLY A 435 ASP A 436 GLY A 437 SITE 3 AC1 26 SER A 438 ASN A 463 GLY A 465 TYR A 466 SITE 4 AC1 26 THR A 467 ILE A 468 GLU A 469 MG A 601 SITE 5 AC1 26 HOH A2367 HOH A2479 HOH A2480 HOH A2515 SITE 6 AC1 26 HOH A2630 ALA B 25 GLY B 26 GLU B 50 SITE 7 AC1 26 VAL B 75 HIS B 114 SITE 1 AC2 5 ASP A 436 ASN A 463 GLY A 465 TPP A 600 SITE 2 AC2 5 HOH A2515 SITE 1 AC3 26 ALA A 25 GLY A 26 GLU A 50 VAL A 75 SITE 2 AC3 26 HIS A 114 HOH A2147 GLY B 385 ASP B 386 SITE 3 AC3 26 GLY B 409 HIS B 410 ILE B 411 GLY B 435 SITE 4 AC3 26 ASP B 436 GLY B 437 SER B 438 ASN B 463 SITE 5 AC3 26 GLY B 465 TYR B 466 THR B 467 ILE B 468 SITE 6 AC3 26 GLU B 469 MG B 601 HOH B2406 HOH B2407 SITE 7 AC3 26 HOH B2437 HOH B2535 SITE 1 AC4 5 ASP B 436 ASN B 463 GLY B 465 TPP B 600 SITE 2 AC4 5 HOH B2437 SITE 1 AC5 6 LEU A 373 GLN A 429 ARG A 518 HOH A2469 SITE 2 AC5 6 HOH A2597 HOH A2631 SITE 1 AC6 3 ARG A 377 GLN A 429 HIS B 398 CRYST1 129.070 140.960 91.060 90.00 125.78 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007748 0.000000 0.005584 0.00000 SCALE2 0.000000 0.007094 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013537 0.00000