HEADER VIRAL PROTEIN/DNA 05-MAR-14 4CSA TITLE CRYSTAL STRUCTURE OF THE ASYMMETRIC HUMAN METAPNEUMOVIRUS M2-1 TITLE 2 TETRAMER BOUND TO A DNA 4-MER COMPND MOL_ID: 1; COMPND 2 MOLECULE: M2-1; COMPND 3 CHAIN: A, B, E; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: M2-1; COMPND 7 CHAIN: C; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 3; COMPND 10 MOLECULE: 5'-D(*AP*GP*TP*TP*AP)-3'; COMPND 11 CHAIN: G; COMPND 12 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HUMAN METAPNEUMOVIRUS; SOURCE 3 ORGANISM_TAXID: 162145; SOURCE 4 STRAIN: NL1-00 (A1); SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VARIANT: ROSETTA2; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: POPINF; SOURCE 11 MOL_ID: 2; SOURCE 12 ORGANISM_SCIENTIFIC: HUMAN METAPNEUMOVIRUS; SOURCE 13 ORGANISM_TAXID: 162145; SOURCE 14 STRAIN: NL1-00 (A1); SOURCE 15 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 16 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 17 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 18 EXPRESSION_SYSTEM_VARIANT: ROSETTA2; SOURCE 19 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 20 EXPRESSION_SYSTEM_PLASMID: POPINF; SOURCE 21 MOL_ID: 3; SOURCE 22 SYNTHETIC: YES; SOURCE 23 ORGANISM_SCIENTIFIC: HUMAN METAPNEUMOVIRUS; SOURCE 24 ORGANISM_TAXID: 162145 KEYWDS VIRAL PROTEIN-DNA COMPLEX, ANTITERMINATOR, TRANSCRIPTION ELONGATION, KEYWDS 2 RNA-BINDING, MODULAR PROTEIN, ASYMMETRIC TETRAMER EXPDTA X-RAY DIFFRACTION AUTHOR C.LEYRAT,M.RENNER,K.HARLOS,J.M.GRIMES REVDAT 4 20-DEC-23 4CSA 1 REMARK LINK REVDAT 3 25-JUN-14 4CSA 1 JRNL REVDAT 2 04-JUN-14 4CSA 1 JRNL REVDAT 1 28-MAY-14 4CSA 0 JRNL AUTH C.LEYRAT,M.RENNER,K.HARLOS,J.T.HUISKONEN,J.M.GRIMES JRNL TITL DRASTIC CHANGES IN CONFORMATIONAL DYNAMICS OF THE JRNL TITL 2 ANTITERMINATOR M2-1 REGULATE TRANSCRIPTION EFFICIENCY IN JRNL TITL 3 PNEUMOVIRINAE. JRNL REF ELIFE V. 3 02674 2014 JRNL REFN ESSN 2050-084X JRNL PMID 24842877 JRNL DOI 10.7554/ELIFE.02674 REMARK 2 REMARK 2 RESOLUTION. 2.28 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.11.4 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.28 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 31.67 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 35900 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.195 REMARK 3 R VALUE (WORKING SET) : 0.194 REMARK 3 FREE R VALUE : 0.222 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.990 REMARK 3 FREE R VALUE TEST SET COUNT : 1792 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 18 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 2.28 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 2.35 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.66 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 2885 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2326 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2758 REMARK 3 BIN R VALUE (WORKING SET) : 0.2326 REMARK 3 BIN FREE R VALUE : 0.2315 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 4.40 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 127 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5229 REMARK 3 NUCLEIC ACID ATOMS : 80 REMARK 3 HETEROGEN ATOMS : 10 REMARK 3 SOLVENT ATOMS : 202 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 58.74 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 74.73 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.45090 REMARK 3 B22 (A**2) : -2.01850 REMARK 3 B33 (A**2) : 3.46950 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 14.90870 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.342 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : 0.271 REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.194 REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 0.278 REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : 0.198 REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.946 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.936 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 5400 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 7276 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 1997 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : 152 ; 2.000 ; HARMONIC REMARK 3 GENERAL PLANES : 756 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 5400 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : 1 ; 5.000 ; SEMIHARMONIC REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 686 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : 16 ; 1.000 ; HARMONIC REMARK 3 UTILITY ANGLES : 16 ; 1.000 ; HARMONIC REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 6182 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.009 REMARK 3 BOND ANGLES (DEGREES) : 1.03 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 2.65 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 23.66 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A REMARK 3 ORIGIN FOR THE GROUP (A): 125.6517 -14.6948 266.5193 REMARK 3 T TENSOR REMARK 3 T11: -0.0178 T22: -0.0037 REMARK 3 T33: -0.0197 T12: -0.0539 REMARK 3 T13: -0.0134 T23: 0.0050 REMARK 3 L TENSOR REMARK 3 L11: 0.3116 L22: 0.5440 REMARK 3 L33: 0.4271 L12: 0.1928 REMARK 3 L13: -0.3167 L23: -0.4776 REMARK 3 S TENSOR REMARK 3 S11: -0.0027 S12: -0.0117 S13: 0.0099 REMARK 3 S21: -0.0119 S22: 0.0167 S23: -0.0310 REMARK 3 S31: 0.0515 S32: -0.0245 S33: -0.0141 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN B REMARK 3 ORIGIN FOR THE GROUP (A): 145.7140 -13.4550 303.4813 REMARK 3 T TENSOR REMARK 3 T11: 0.0890 T22: -0.0455 REMARK 3 T33: -0.0609 T12: -0.0679 REMARK 3 T13: -0.0095 T23: 0.0248 REMARK 3 L TENSOR REMARK 3 L11: 0.6391 L22: 0.0000 REMARK 3 L33: 0.9143 L12: -0.3705 REMARK 3 L13: 0.3744 L23: -0.3065 REMARK 3 S TENSOR REMARK 3 S11: 0.0124 S12: -0.0383 S13: 0.0343 REMARK 3 S21: -0.0231 S22: 0.0096 S23: 0.0078 REMARK 3 S31: -0.0077 S32: -0.0219 S33: -0.0220 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN C REMARK 3 ORIGIN FOR THE GROUP (A): 142.1915 -3.2741 262.4013 REMARK 3 T TENSOR REMARK 3 T11: -0.1014 T22: 0.0310 REMARK 3 T33: 0.0359 T12: -0.0556 REMARK 3 T13: -0.0003 T23: -0.0801 REMARK 3 L TENSOR REMARK 3 L11: 0.0193 L22: 0.4071 REMARK 3 L33: 1.2932 L12: -0.3285 REMARK 3 L13: -0.1372 L23: -0.1014 REMARK 3 S TENSOR REMARK 3 S11: -0.0153 S12: 0.0800 S13: -0.0336 REMARK 3 S21: 0.1021 S22: 0.0158 S23: -0.0641 REMARK 3 S31: -0.0266 S32: 0.0226 S33: -0.0006 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN E REMARK 3 ORIGIN FOR THE GROUP (A): 129.4771 -14.5062 286.4329 REMARK 3 T TENSOR REMARK 3 T11: 0.0379 T22: -0.0393 REMARK 3 T33: -0.0259 T12: -0.0381 REMARK 3 T13: -0.0795 T23: 0.0066 REMARK 3 L TENSOR REMARK 3 L11: 0.9390 L22: 0.1034 REMARK 3 L33: 1.0017 L12: -0.2521 REMARK 3 L13: 0.7645 L23: -0.6800 REMARK 3 S TENSOR REMARK 3 S11: 0.0145 S12: 0.0613 S13: -0.0614 REMARK 3 S21: 0.0651 S22: -0.0112 S23: -0.0435 REMARK 3 S31: 0.0116 S32: -0.0674 S33: -0.0033 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4CSA COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 05-MAR-14. REMARK 100 THE DEPOSITION ID IS D_1290059891. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 04-MAY-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I04 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9795 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL SI(111) REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 35938 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.280 REMARK 200 RESOLUTION RANGE LOW (A) : 63.040 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.800 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 6.500 REMARK 200 R MERGE (I) : 0.05000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 19.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.28 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.34 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.8 REMARK 200 DATA REDUNDANCY IN SHELL : 5.00 REMARK 200 R MERGE FOR SHELL (I) : 0.84000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 4CS8 REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.50 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.30 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 28 % W/V POLYETHYLENE GLYCOL REMARK 280 MONOMETHYL ETHER 2000, 0.100 M BIS-TRIS PH 6.5 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 46.95000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: PENTAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: PENTAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 15850 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 30400 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -43.5 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, E, G REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -1 REMARK 465 PRO A 0 REMARK 465 MET A 1 REMARK 465 SER A 2 REMARK 465 ASP A 54 REMARK 465 GLY A 55 REMARK 465 LEU A 56 REMARK 465 SER A 57 REMARK 465 ILE A 58 REMARK 465 ILE A 59 REMARK 465 SER A 60 REMARK 465 ASN A 171 REMARK 465 ASP A 172 REMARK 465 SER A 173 REMARK 465 SER A 174 REMARK 465 TYR A 175 REMARK 465 ALA A 176 REMARK 465 LEU A 177 REMARK 465 GLN A 178 REMARK 465 ASP A 179 REMARK 465 SER A 180 REMARK 465 GLU A 181 REMARK 465 SER A 182 REMARK 465 THR A 183 REMARK 465 ASN A 184 REMARK 465 GLN A 185 REMARK 465 VAL A 186 REMARK 465 GLN A 187 REMARK 465 GLY B -1 REMARK 465 PRO B 0 REMARK 465 MET B 1 REMARK 465 SER B 2 REMARK 465 GLY B 55 REMARK 465 LEU B 56 REMARK 465 SER B 57 REMARK 465 ILE B 58 REMARK 465 ILE B 59 REMARK 465 SER B 60 REMARK 465 GLY B 168 REMARK 465 ALA B 169 REMARK 465 GLU B 170 REMARK 465 ASN B 171 REMARK 465 ASP B 172 REMARK 465 SER B 173 REMARK 465 SER B 174 REMARK 465 TYR B 175 REMARK 465 ALA B 176 REMARK 465 LEU B 177 REMARK 465 GLN B 178 REMARK 465 ASP B 179 REMARK 465 SER B 180 REMARK 465 GLU B 181 REMARK 465 SER B 182 REMARK 465 THR B 183 REMARK 465 ASN B 184 REMARK 465 GLN B 185 REMARK 465 VAL B 186 REMARK 465 GLN B 187 REMARK 465 GLY C -1 REMARK 465 PRO C 0 REMARK 465 MET C 1 REMARK 465 ASP C 54 REMARK 465 GLY C 55 REMARK 465 LEU C 56 REMARK 465 SER C 57 REMARK 465 ILE C 58 REMARK 465 ILE C 59 REMARK 465 SER C 60 REMARK 465 GLY C 61 REMARK 465 SER C 174 REMARK 465 TYR C 175 REMARK 465 ALA C 176 REMARK 465 LEU C 177 REMARK 465 GLN C 178 REMARK 465 ASP C 179 REMARK 465 SER C 180 REMARK 465 GLU C 181 REMARK 465 SER C 182 REMARK 465 THR C 183 REMARK 465 ASN C 184 REMARK 465 GLN C 185 REMARK 465 VAL C 186 REMARK 465 GLN C 187 REMARK 465 GLY E -1 REMARK 465 PRO E 0 REMARK 465 MET E 1 REMARK 465 SER E 2 REMARK 465 ALA E 53 REMARK 465 ASP E 54 REMARK 465 GLY E 55 REMARK 465 LEU E 56 REMARK 465 SER E 57 REMARK 465 ILE E 58 REMARK 465 ILE E 59 REMARK 465 SER E 60 REMARK 465 GLY E 61 REMARK 465 ALA E 62 REMARK 465 GLY E 63 REMARK 465 LEU E 177 REMARK 465 GLN E 178 REMARK 465 ASP E 179 REMARK 465 SER E 180 REMARK 465 GLU E 181 REMARK 465 SER E 182 REMARK 465 THR E 183 REMARK 465 ASN E 184 REMARK 465 GLN E 185 REMARK 465 VAL E 186 REMARK 465 GLN E 187 REMARK 465 DA G 5 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 20 34.51 71.24 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH E2021 DISTANCE = 6.38 ANGSTROMS REMARK 525 HOH E2022 DISTANCE = 6.40 ANGSTROMS REMARK 525 HOH E2024 DISTANCE = 8.97 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A1171 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 7 SG REMARK 620 2 CYS A 15 SG 111.2 REMARK 620 3 CYS A 21 SG 112.1 110.8 REMARK 620 4 HIS A 25 NE2 101.9 108.6 111.9 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B1168 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 7 SG REMARK 620 2 CYS B 15 SG 107.0 REMARK 620 3 CYS B 21 SG 108.5 117.9 REMARK 620 4 HIS B 25 NE2 107.1 103.4 112.2 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN C1174 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS C 7 SG REMARK 620 2 CYS C 15 SG 107.4 REMARK 620 3 CYS C 21 SG 113.3 115.5 REMARK 620 4 HIS C 25 NE2 105.4 106.7 107.9 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN E1177 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS E 7 SG REMARK 620 2 CYS E 15 SG 106.2 REMARK 620 3 CYS E 21 SG 110.3 112.1 REMARK 620 4 HIS E 25 NE2 109.1 105.6 113.3 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN E 1177 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 1171 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 1168 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN C 1174 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL C 1175 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4CS7 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE ASYMMETRIC HUMAN METAPNEUMOVIRUS M2-1 REMARK 900 TETRAMER, FORM 1 REMARK 900 RELATED ID: 4CS8 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE ASYMMETRIC HUMAN METAPNEUMOVIRUS M2-1 REMARK 900 TETRAMER, FORM 2 REMARK 900 RELATED ID: 4CS9 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE ASYMMETRIC HUMAN METAPNEUMOVIRUS M2-1 REMARK 900 TETRAMER BOUND TO ADENOSINE MONOPHOSPHATE DBREF 4CSA A 1 187 UNP Q8QN58 Q8QN58_9MONO 1 187 DBREF 4CSA B 1 187 UNP Q8QN58 Q8QN58_9MONO 1 187 DBREF 4CSA C 1 187 UNP Q8QN58 Q8QN58_9MONO 1 187 DBREF 4CSA E 1 187 UNP Q8QN58 Q8QN58_9MONO 1 187 DBREF 4CSA G 1 5 PDB 4CSA 4CSA 1 5 SEQADV 4CSA GLY A -1 UNP Q8QN58 EXPRESSION TAG SEQADV 4CSA PRO A 0 UNP Q8QN58 EXPRESSION TAG SEQADV 4CSA GLY B -1 UNP Q8QN58 EXPRESSION TAG SEQADV 4CSA PRO B 0 UNP Q8QN58 EXPRESSION TAG SEQADV 4CSA GLY C -1 UNP Q8QN58 EXPRESSION TAG SEQADV 4CSA PRO C 0 UNP Q8QN58 EXPRESSION TAG SEQADV 4CSA ASP C 49 UNP Q8QN58 ASN 49 CONFLICT SEQADV 4CSA GLY E -1 UNP Q8QN58 EXPRESSION TAG SEQADV 4CSA PRO E 0 UNP Q8QN58 EXPRESSION TAG SEQRES 1 A 189 GLY PRO MET SER ARG LYS ALA PRO CYS LYS TYR GLU VAL SEQRES 2 A 189 ARG GLY LYS CYS ASN ARG GLY SER GLU CYS LYS PHE ASN SEQRES 3 A 189 HIS ASN TYR TRP SER TRP PRO ASP ARG TYR LEU LEU ILE SEQRES 4 A 189 ARG SER ASN TYR LEU LEU ASN GLN LEU LEU ARG ASN THR SEQRES 5 A 189 ASP ARG ALA ASP GLY LEU SER ILE ILE SER GLY ALA GLY SEQRES 6 A 189 ARG GLU ASP ARG THR GLN ASP PHE VAL LEU GLY SER THR SEQRES 7 A 189 ASN VAL VAL GLN GLY TYR ILE ASP ASP ASN GLN SER ILE SEQRES 8 A 189 THR LYS ALA ALA ALA CYS TYR SER LEU HIS ASN ILE ILE SEQRES 9 A 189 LYS GLN LEU GLN GLU VAL GLU VAL ARG GLN ALA ARG ASP SEQRES 10 A 189 ASN LYS LEU SER ASP SER LYS HIS VAL ALA LEU HIS ASN SEQRES 11 A 189 LEU VAL LEU SER TYR MET GLU MET SER LYS THR PRO ALA SEQRES 12 A 189 SER LEU ILE ASN ASN LEU LYS ARG LEU PRO ARG GLU LYS SEQRES 13 A 189 LEU LYS LYS LEU ALA LYS LEU ILE ILE ASP LEU SER ALA SEQRES 14 A 189 GLY ALA GLU ASN ASP SER SER TYR ALA LEU GLN ASP SER SEQRES 15 A 189 GLU SER THR ASN GLN VAL GLN SEQRES 1 B 189 GLY PRO MET SER ARG LYS ALA PRO CYS LYS TYR GLU VAL SEQRES 2 B 189 ARG GLY LYS CYS ASN ARG GLY SER GLU CYS LYS PHE ASN SEQRES 3 B 189 HIS ASN TYR TRP SER TRP PRO ASP ARG TYR LEU LEU ILE SEQRES 4 B 189 ARG SER ASN TYR LEU LEU ASN GLN LEU LEU ARG ASN THR SEQRES 5 B 189 ASP ARG ALA ASP GLY LEU SER ILE ILE SER GLY ALA GLY SEQRES 6 B 189 ARG GLU ASP ARG THR GLN ASP PHE VAL LEU GLY SER THR SEQRES 7 B 189 ASN VAL VAL GLN GLY TYR ILE ASP ASP ASN GLN SER ILE SEQRES 8 B 189 THR LYS ALA ALA ALA CYS TYR SER LEU HIS ASN ILE ILE SEQRES 9 B 189 LYS GLN LEU GLN GLU VAL GLU VAL ARG GLN ALA ARG ASP SEQRES 10 B 189 ASN LYS LEU SER ASP SER LYS HIS VAL ALA LEU HIS ASN SEQRES 11 B 189 LEU VAL LEU SER TYR MET GLU MET SER LYS THR PRO ALA SEQRES 12 B 189 SER LEU ILE ASN ASN LEU LYS ARG LEU PRO ARG GLU LYS SEQRES 13 B 189 LEU LYS LYS LEU ALA LYS LEU ILE ILE ASP LEU SER ALA SEQRES 14 B 189 GLY ALA GLU ASN ASP SER SER TYR ALA LEU GLN ASP SER SEQRES 15 B 189 GLU SER THR ASN GLN VAL GLN SEQRES 1 C 189 GLY PRO MET SER ARG LYS ALA PRO CYS LYS TYR GLU VAL SEQRES 2 C 189 ARG GLY LYS CYS ASN ARG GLY SER GLU CYS LYS PHE ASN SEQRES 3 C 189 HIS ASN TYR TRP SER TRP PRO ASP ARG TYR LEU LEU ILE SEQRES 4 C 189 ARG SER ASN TYR LEU LEU ASN GLN LEU LEU ARG ASP THR SEQRES 5 C 189 ASP ARG ALA ASP GLY LEU SER ILE ILE SER GLY ALA GLY SEQRES 6 C 189 ARG GLU ASP ARG THR GLN ASP PHE VAL LEU GLY SER THR SEQRES 7 C 189 ASN VAL VAL GLN GLY TYR ILE ASP ASP ASN GLN SER ILE SEQRES 8 C 189 THR LYS ALA ALA ALA CYS TYR SER LEU HIS ASN ILE ILE SEQRES 9 C 189 LYS GLN LEU GLN GLU VAL GLU VAL ARG GLN ALA ARG ASP SEQRES 10 C 189 ASN LYS LEU SER ASP SER LYS HIS VAL ALA LEU HIS ASN SEQRES 11 C 189 LEU VAL LEU SER TYR MET GLU MET SER LYS THR PRO ALA SEQRES 12 C 189 SER LEU ILE ASN ASN LEU LYS ARG LEU PRO ARG GLU LYS SEQRES 13 C 189 LEU LYS LYS LEU ALA LYS LEU ILE ILE ASP LEU SER ALA SEQRES 14 C 189 GLY ALA GLU ASN ASP SER SER TYR ALA LEU GLN ASP SER SEQRES 15 C 189 GLU SER THR ASN GLN VAL GLN SEQRES 1 E 189 GLY PRO MET SER ARG LYS ALA PRO CYS LYS TYR GLU VAL SEQRES 2 E 189 ARG GLY LYS CYS ASN ARG GLY SER GLU CYS LYS PHE ASN SEQRES 3 E 189 HIS ASN TYR TRP SER TRP PRO ASP ARG TYR LEU LEU ILE SEQRES 4 E 189 ARG SER ASN TYR LEU LEU ASN GLN LEU LEU ARG ASN THR SEQRES 5 E 189 ASP ARG ALA ASP GLY LEU SER ILE ILE SER GLY ALA GLY SEQRES 6 E 189 ARG GLU ASP ARG THR GLN ASP PHE VAL LEU GLY SER THR SEQRES 7 E 189 ASN VAL VAL GLN GLY TYR ILE ASP ASP ASN GLN SER ILE SEQRES 8 E 189 THR LYS ALA ALA ALA CYS TYR SER LEU HIS ASN ILE ILE SEQRES 9 E 189 LYS GLN LEU GLN GLU VAL GLU VAL ARG GLN ALA ARG ASP SEQRES 10 E 189 ASN LYS LEU SER ASP SER LYS HIS VAL ALA LEU HIS ASN SEQRES 11 E 189 LEU VAL LEU SER TYR MET GLU MET SER LYS THR PRO ALA SEQRES 12 E 189 SER LEU ILE ASN ASN LEU LYS ARG LEU PRO ARG GLU LYS SEQRES 13 E 189 LEU LYS LYS LEU ALA LYS LEU ILE ILE ASP LEU SER ALA SEQRES 14 E 189 GLY ALA GLU ASN ASP SER SER TYR ALA LEU GLN ASP SER SEQRES 15 E 189 GLU SER THR ASN GLN VAL GLN SEQRES 1 G 5 DA DG DT DT DA HET ZN A1171 1 HET ZN B1168 1 HET ZN C1174 1 HET GOL C1175 6 HET ZN E1177 1 HETNAM ZN ZINC ION HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 6 ZN 4(ZN 2+) FORMUL 9 GOL C3 H8 O3 FORMUL 11 HOH *202(H2 O) HELIX 1 1 CYS A 7 GLY A 13 1 7 HELIX 2 2 ASN A 26 TRP A 30 5 5 HELIX 3 3 PRO A 31 ASP A 51 1 21 HELIX 4 4 ARG A 64 GLY A 74 1 11 HELIX 5 5 GLY A 74 ASP A 84 1 11 HELIX 6 6 THR A 90 LEU A 105 1 16 HELIX 7 7 GLN A 106 LYS A 117 1 12 HELIX 8 8 ASP A 120 MET A 136 1 17 HELIX 9 9 THR A 139 LEU A 150 1 12 HELIX 10 10 PRO A 151 ALA A 167 1 17 HELIX 11 11 CYS B 7 ARG B 12 1 6 HELIX 12 12 ARG B 17 CYS B 21 5 5 HELIX 13 13 ASN B 26 TRP B 30 5 5 HELIX 14 14 PRO B 31 THR B 50 1 20 HELIX 15 15 GLY B 63 GLY B 74 1 12 HELIX 16 16 GLY B 74 ASP B 84 1 11 HELIX 17 17 THR B 90 GLN B 104 1 15 HELIX 18 18 GLN B 106 ASN B 116 1 11 HELIX 19 19 ASP B 120 MET B 136 1 17 HELIX 20 20 THR B 139 LEU B 150 1 12 HELIX 21 21 PRO B 151 ALA B 167 1 17 HELIX 22 22 CYS C 7 GLY C 13 1 7 HELIX 23 23 ARG C 17 CYS C 21 5 5 HELIX 24 24 ASN C 26 TRP C 30 5 5 HELIX 25 25 PRO C 31 ASP C 51 1 21 HELIX 26 26 GLY C 63 LEU C 73 1 11 HELIX 27 27 GLY C 74 ASP C 84 1 11 HELIX 28 28 THR C 90 GLN C 104 1 15 HELIX 29 29 GLN C 106 ASN C 116 1 11 HELIX 30 30 ASP C 120 SER C 137 1 18 HELIX 31 31 THR C 139 ARG C 149 1 11 HELIX 32 32 PRO C 151 SER C 166 1 16 HELIX 33 33 ALA C 169 SER C 173 5 5 HELIX 34 34 CYS E 7 ARG E 12 1 6 HELIX 35 35 ARG E 17 CYS E 21 5 5 HELIX 36 36 ASN E 26 TRP E 30 5 5 HELIX 37 37 PRO E 31 THR E 50 1 20 HELIX 38 38 ARG E 64 LEU E 73 1 10 HELIX 39 39 GLY E 74 ASP E 84 1 11 HELIX 40 40 THR E 90 LYS E 103 1 14 HELIX 41 41 GLN E 106 ASN E 116 1 11 HELIX 42 42 ASP E 120 SER E 137 1 18 HELIX 43 43 THR E 139 ARG E 149 1 11 HELIX 44 44 PRO E 151 SER E 166 1 16 LINK SG CYS A 7 ZN ZN A1171 1555 1555 2.29 LINK SG CYS A 15 ZN ZN A1171 1555 1555 2.17 LINK SG CYS A 21 ZN ZN A1171 1555 1555 2.27 LINK NE2 HIS A 25 ZN ZN A1171 1555 1555 1.95 LINK SG CYS B 7 ZN ZN B1168 1555 1555 2.25 LINK SG CYS B 15 ZN ZN B1168 1555 1555 2.22 LINK SG CYS B 21 ZN ZN B1168 1555 1555 2.18 LINK NE2 HIS B 25 ZN ZN B1168 1555 1555 2.04 LINK SG CYS C 7 ZN ZN C1174 1555 1555 2.31 LINK SG CYS C 15 ZN ZN C1174 1555 1555 2.21 LINK SG CYS C 21 ZN ZN C1174 1555 1555 2.29 LINK NE2 HIS C 25 ZN ZN C1174 1555 1555 2.00 LINK SG CYS E 7 ZN ZN E1177 1555 1555 2.32 LINK SG CYS E 15 ZN ZN E1177 1555 1555 2.19 LINK SG CYS E 21 ZN ZN E1177 1555 1555 2.28 LINK NE2 HIS E 25 ZN ZN E1177 1555 1555 1.99 SITE 1 AC1 4 CYS E 7 CYS E 15 CYS E 21 HIS E 25 SITE 1 AC2 4 CYS A 7 CYS A 15 CYS A 21 HIS A 25 SITE 1 AC3 4 CYS B 7 CYS B 15 CYS B 21 HIS B 25 SITE 1 AC4 4 CYS C 7 CYS C 15 CYS C 21 HIS C 25 SITE 1 AC5 5 ARG B 33 TRP C 30 PRO C 31 ASP C 32 SITE 2 AC5 5 HOH C2076 CRYST1 50.140 93.900 85.510 90.00 95.82 90.00 P 1 21 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019944 0.000000 0.002033 0.00000 SCALE2 0.000000 0.010650 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011755 0.00000