HEADER RIBOSOME 21-MAR-14 4CUV OBSLTE 10-DEC-14 4CUV 4V91 TITLE KLUYVEROMYCES LACTIS 80S RIBOSOME IN COMPLEX WITH CRPV-IRES SPLIT 4CUV 4CUW COMPND MOL_ID: 1; COMPND 2 MOLECULE: 25S RRNA; COMPND 3 CHAIN: 1; COMPND 4 MOL_ID: 2; COMPND 5 MOLECULE: 5S RRNA; COMPND 6 CHAIN: 3; COMPND 7 MOL_ID: 3; COMPND 8 MOLECULE: 5.8S RRNA; COMPND 9 CHAIN: 4 SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: KLUYVEROMYCES LACTIS; SOURCE 3 ORGANISM_TAXID: 28985; SOURCE 4 MOL_ID: 2; SOURCE 5 ORGANISM_SCIENTIFIC: KLUYVEROMYCES LACTIS; SOURCE 6 ORGANISM_TAXID: 28985; SOURCE 7 MOL_ID: 3; SOURCE 8 ORGANISM_SCIENTIFIC: KLUYVEROMYCES LACTIS; SOURCE 9 ORGANISM_TAXID: 28985 KEYWDS TRANSLATION, INITIATION, RIBOSOME, IRES EXPDTA ELECTRON MICROSCOPY AUTHOR I.S.FERNANDEZ,X.BAI,S.H.W.SCHERES,V.RAMAKRISHNAN REVDAT 3 10-DEC-14 4CUV 1 OBSLTE REVDAT 2 28-MAY-14 4CUV 1 JRNL REVDAT 1 14-MAY-14 4CUV 0 JRNL AUTH I.S.FERNANDEZ,X.BAI,G.MURSHUDOV,S.H.W.SCHERES,V.RAMAKRISHNAN JRNL TITL INITIATION OF TRANSLATION BY CRICKET PARALYSIS VIRUS IRES JRNL TITL 2 REQUIRES ITS TRANSLOCATION IN THE RIBOSOME. JRNL REF CELL(CAMBRIDGE,MASS.) V. 157 823 2014 JRNL REFN ISSN 0092-8674 JRNL PMID 24792965 JRNL DOI 10.1016/J.CELL.2014.04.015 REMARK 2 REMARK 2 RESOLUTION. 3.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : RELION REMARK 3 RECONSTRUCTION SCHEMA : RELION REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : 3B31 REMARK 3 REFINEMENT SPACE : RECIPROCAL REMARK 3 REFINEMENT PROTOCOL : NULL REMARK 3 REFINEMENT TARGET : R-FACTOR, FSC REMARK 3 OVERALL ANISOTROPIC B VALUE : 60 REMARK 3 REMARK 3 FITTING PROCEDURE : FLEXIBLE REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : 1.34 REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 3.7 REMARK 3 NUMBER OF PARTICLES : 18132 REMARK 3 CTF CORRECTION METHOD : EACH PARTICLE REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 4CUV COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 5 REMARK 5 THIS ENTRY WITH OTHER SPLIT ENTRIES HAVE BEEN CONSOLIDATED INTO A REMARK 5 COMBINED FILE FOR COMPLETE REPRESENTATION. NO COORDINATES HAVE BEEN REMARK 5 CHANGED. REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 24-MAR-14. REMARK 100 THE PDBE ID CODE IS EBI-60090. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : VITREOUS ICE REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : NULL REMARK 245 NAME OF SAMPLE : NULL REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : NULL REMARK 245 SAMPLE SUPPORT DETAILS : CARBON REMARK 245 SAMPLE VITRIFICATION DETAILS : LIQUID ETHANE REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : NULL REMARK 245 SAMPLE DETAILS : NULL REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : 07-JUL-13 REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : 1900 REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : OTHER REMARK 245 DETECTOR TYPE : FEI FALCON II (4KX4K) REMARK 245 MINIMUM DEFOCUS (NM) : 1.8 REMARK 245 MAXIMUM DEFOCUS (NM) : 3 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : 2.7 REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 40 REMARK 245 ILLUMINATION MODE : OTHER REMARK 245 NOMINAL MAGNIFICATION : 47000 REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 300 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: 1, 3, 4 REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 G 1 1 REMARK 465 U 1 2 REMARK 465 U 1 441 REMARK 465 G 1 442 REMARK 465 G 1 443 REMARK 465 U 1 444 REMARK 465 G 1 445 REMARK 465 U 1 446 REMARK 465 U 1 447 REMARK 465 U 1 448 REMARK 465 U 1 449 REMARK 465 G 1 450 REMARK 465 U 1 451 REMARK 465 G 1 452 REMARK 465 C 1 453 REMARK 465 C 1 454 REMARK 465 C 1 455 REMARK 465 U 1 456 REMARK 465 C 1 457 REMARK 465 U 1 458 REMARK 465 G 1 459 REMARK 465 C 1 460 REMARK 465 U 1 461 REMARK 465 C 1 462 REMARK 465 C 1 463 REMARK 465 U 1 464 REMARK 465 U 1 465 REMARK 465 G 1 466 REMARK 465 U 1 467 REMARK 465 G 1 468 REMARK 465 G 1 469 REMARK 465 G 1 470 REMARK 465 U 1 471 REMARK 465 A 1 472 REMARK 465 G 1 473 REMARK 465 G 1 474 REMARK 465 G 1 475 REMARK 465 G 1 476 REMARK 465 A 1 477 REMARK 465 A 1 478 REMARK 465 U 1 479 REMARK 465 C 1 480 REMARK 465 U 1 481 REMARK 465 C 1 482 REMARK 465 G 1 483 REMARK 465 C 1 484 REMARK 465 A 1 485 REMARK 465 U 1 486 REMARK 465 U 1 487 REMARK 465 U 1 488 REMARK 465 C 1 489 REMARK 465 A 1 490 REMARK 465 C 1 491 REMARK 465 U 1 492 REMARK 465 G 1 493 REMARK 465 G 1 494 REMARK 465 A 1 1956 REMARK 465 G 1 1957 REMARK 465 U 1 1958 REMARK 465 G 1 1959 REMARK 465 A 1 1960 REMARK 465 G 1 1961 REMARK 465 G 1 1962 REMARK 465 G 1 1963 REMARK 465 C 1 1964 REMARK 465 C 1 1965 REMARK 465 U 1 1966 REMARK 465 U 1 1967 REMARK 465 G 1 1968 REMARK 465 G 1 1969 REMARK 465 U 1 1970 REMARK 465 C 1 1971 REMARK 465 A 1 1972 REMARK 465 G 1 1973 REMARK 465 A 1 1974 REMARK 465 C 1 1975 REMARK 465 G 1 1976 REMARK 465 C 1 1977 REMARK 465 A 1 1978 REMARK 465 G 1 1979 REMARK 465 C 1 1980 REMARK 465 G 1 1981 REMARK 465 G 1 1982 REMARK 465 G 1 1983 REMARK 465 C 1 1984 REMARK 465 G 1 1985 REMARK 465 U 1 1986 REMARK 465 G 1 1987 REMARK 465 C 1 1988 REMARK 465 U 1 1989 REMARK 465 U 1 1990 REMARK 465 G 1 1991 REMARK 465 U 1 1992 REMARK 465 G 1 1993 REMARK 465 G 1 1994 REMARK 465 A 1 1995 REMARK 465 C 1 1996 REMARK 465 U 1 1997 REMARK 465 G 1 1998 REMARK 465 C 1 1999 REMARK 465 U 1 2000 REMARK 465 U 1 2001 REMARK 465 G 1 2002 REMARK 465 G 1 2003 REMARK 465 U 1 2004 REMARK 465 G 1 2005 REMARK 465 G 1 2006 REMARK 465 G 1 2007 REMARK 465 G 1 2008 REMARK 465 C 1 2009 REMARK 465 U 1 2010 REMARK 465 U 1 2011 REMARK 465 G 1 2012 REMARK 465 C 1 2013 REMARK 465 U 1 2014 REMARK 465 C 1 2015 REMARK 465 U 1 2016 REMARK 465 G 1 2017 REMARK 465 C 1 2018 REMARK 465 U 1 2019 REMARK 465 A 1 2020 REMARK 465 G 1 2021 REMARK 465 G 1 2022 REMARK 465 C 1 2023 REMARK 465 G 1 2024 REMARK 465 G 1 2025 REMARK 465 A 1 2026 REMARK 465 C 1 2027 REMARK 465 U 1 2028 REMARK 465 A 1 2029 REMARK 465 C 1 2030 REMARK 465 U 1 2031 REMARK 465 U 1 2032 REMARK 465 G 1 2033 REMARK 465 C 1 2034 REMARK 465 G 1 2035 REMARK 465 U 1 2036 REMARK 465 G 1 2037 REMARK 465 C 1 2038 REMARK 465 C 1 2039 REMARK 465 U 1 2040 REMARK 465 U 1 2041 REMARK 465 G 1 2042 REMARK 465 U 1 2043 REMARK 465 U 1 2044 REMARK 465 G 1 2045 REMARK 465 U 1 2046 REMARK 465 A 1 2047 REMARK 465 G 1 2048 REMARK 465 A 1 2049 REMARK 465 C 1 2050 REMARK 465 G 1 2051 REMARK 465 G 1 2052 REMARK 465 C 1 2053 REMARK 465 C 1 2054 REMARK 465 U 1 2055 REMARK 465 U 1 2056 REMARK 465 G 1 2057 REMARK 465 G 1 2058 REMARK 465 U 1 2059 REMARK 465 A 1 2060 REMARK 465 G 1 2061 REMARK 465 G 1 2062 REMARK 465 U 1 2063 REMARK 465 C 1 2064 REMARK 465 U 1 2065 REMARK 465 C 1 2066 REMARK 465 U 1 2067 REMARK 465 U 1 2068 REMARK 465 G 1 2069 REMARK 465 U 1 2070 REMARK 465 A 1 2071 REMARK 465 G 1 2072 REMARK 465 A 1 2073 REMARK 465 C 1 2074 REMARK 465 C 1 2075 REMARK 465 G 1 2076 REMARK 465 U 1 2077 REMARK 465 C 1 2078 REMARK 465 G 1 2079 REMARK 465 C 1 2080 REMARK 465 U 1 2081 REMARK 465 U 1 2082 REMARK 465 G 1 2083 REMARK 465 C 1 2084 REMARK 465 U 1 2085 REMARK 465 A 1 2086 REMARK 465 C 1 2087 REMARK 465 A 1 2088 REMARK 465 A 1 2089 REMARK 465 U 1 2090 REMARK 465 U 1 2091 REMARK 465 A 1 2092 REMARK 465 A 1 2501A REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 C 13265 C6 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O2' U 1 83 O3' C 1 700 1.97 REMARK 500 O2' G 1 394 N7 A 1 396 2.05 REMARK 500 O2 C 1 959 O2' G 1 2614 2.14 REMARK 500 O2' A 1 1112 O3' G 1 1370 2.16 REMARK 500 N4 C 1 1192 OP2 A 1 1302 2.16 REMARK 500 O2' G 1 1464 N7 G 1 1466 2.12 REMARK 500 O2' A 1 1524 OP2 U 1 1526 2.03 REMARK 500 O2' G 1 1868 O2' C 1 2118 2.17 REMARK 500 O2' C 1 1870 O2' U 1 3066 1.94 REMARK 500 OP2 C 1 2568 O4 U 1 2570 2.14 REMARK 500 O2' U 1 2617 OP2 G 1 2620 2.18 REMARK 500 OP1 G 1 2658 OP2 C 1 2755 2.19 REMARK 500 O2' U 1 2944 N7 G 1 2947 2.19 REMARK 500 O2' A 3 11 OP2 A 3 13 2.10 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 U 1 9 C2' - C3' - O3' ANGL. DEV. = 13.8 DEGREES REMARK 500 A 1 11 C2' - C3' - O3' ANGL. DEV. = 12.6 DEGREES REMARK 500 U 1 25 C2' - C3' - O3' ANGL. DEV. = 14.1 DEGREES REMARK 500 C 1 27 N1 - C1' - C2' ANGL. DEV. = 8.2 DEGREES REMARK 500 C 1 28 C2' - C3' - O3' ANGL. DEV. = 12.9 DEGREES REMARK 500 C 1 31 C2' - C3' - O3' ANGL. DEV. = 11.6 DEGREES REMARK 500 U 1 32 C5' - C4' - O4' ANGL. DEV. = 6.3 DEGREES REMARK 500 U 1 32 N1 - C1' - C2' ANGL. DEV. = 8.5 DEGREES REMARK 500 U 1 50 C5' - C4' - O4' ANGL. DEV. = 6.8 DEGREES REMARK 500 A 1 65 C2' - C3' - O3' ANGL. DEV. = 13.1 DEGREES REMARK 500 U 1 87 N1 - C1' - C2' ANGL. DEV. = 10.1 DEGREES REMARK 500 A 1 88 C5' - C4' - O4' ANGL. DEV. = 6.8 DEGREES REMARK 500 G 1 91 C5' - C4' - C3' ANGL. DEV. = 11.1 DEGREES REMARK 500 G 1 91 C5' - C4' - O4' ANGL. DEV. = 9.5 DEGREES REMARK 500 G 1 98 C5' - C4' - O4' ANGL. DEV. = 6.4 DEGREES REMARK 500 A 1 107 N9 - C1' - C2' ANGL. DEV. = 9.1 DEGREES REMARK 500 A 1 109 C2' - C3' - O3' ANGL. DEV. = 10.8 DEGREES REMARK 500 A 1 109 C4' - C3' - O3' ANGL. DEV. = 16.0 DEGREES REMARK 500 A 1 109 N9 - C1' - C2' ANGL. DEV. = 10.8 DEGREES REMARK 500 A 1 115 C2' - C3' - O3' ANGL. DEV. = 16.7 DEGREES REMARK 500 U 1 119 C5' - C4' - O4' ANGL. DEV. = 7.8 DEGREES REMARK 500 A 1 121 N9 - C1' - C2' ANGL. DEV. = 10.6 DEGREES REMARK 500 G 1 127 C2' - C3' - O3' ANGL. DEV. = 14.0 DEGREES REMARK 500 C 1 132 C2' - C3' - O3' ANGL. DEV. = 15.0 DEGREES REMARK 500 C 1 132 C4' - C3' - O3' ANGL. DEV. = 12.3 DEGREES REMARK 500 U 1 133 C2' - C3' - O3' ANGL. DEV. = 11.9 DEGREES REMARK 500 U 1 133 C4' - C3' - O3' ANGL. DEV. = 12.7 DEGREES REMARK 500 U 1 134 C5' - C4' - O4' ANGL. DEV. = 6.3 DEGREES REMARK 500 A 1 150 C5' - C4' - O4' ANGL. DEV. = 7.1 DEGREES REMARK 500 U 1 167 C2' - C3' - O3' ANGL. DEV. = 19.3 DEGREES REMARK 500 U 1 168 C5' - C4' - O4' ANGL. DEV. = 6.0 DEGREES REMARK 500 U 1 169 N1 - C1' - C2' ANGL. DEV. = 10.1 DEGREES REMARK 500 C 1 175 C5' - C4' - O4' ANGL. DEV. = 6.3 DEGREES REMARK 500 C 1 179 O4' - C1' - N1 ANGL. DEV. = 5.4 DEGREES REMARK 500 U 1 181 N1 - C1' - C2' ANGL. DEV. = 11.0 DEGREES REMARK 500 G 1 183 C5' - C4' - O4' ANGL. DEV. = 7.3 DEGREES REMARK 500 U 1 188 C5' - C4' - O4' ANGL. DEV. = 7.5 DEGREES REMARK 500 G 1 189 C5' - C4' - C3' ANGL. DEV. = 10.2 DEGREES REMARK 500 G 1 189 C5' - C4' - O4' ANGL. DEV. = 6.2 DEGREES REMARK 500 U 1 190 C2' - C3' - O3' ANGL. DEV. = 13.0 DEGREES REMARK 500 U 1 191 C5' - C4' - O4' ANGL. DEV. = 7.0 DEGREES REMARK 500 C 1 200 C5' - C4' - O4' ANGL. DEV. = 8.3 DEGREES REMARK 500 G 1 206 N9 - C1' - C2' ANGL. DEV. = 8.1 DEGREES REMARK 500 C 1 208 N1 - C1' - C2' ANGL. DEV. = 8.2 DEGREES REMARK 500 G 1 218 N9 - C1' - C2' ANGL. DEV. = 10.7 DEGREES REMARK 500 A 1 219 C2' - C3' - O3' ANGL. DEV. = 12.7 DEGREES REMARK 500 A 1 219 C5' - C4' - O4' ANGL. DEV. = 6.9 DEGREES REMARK 500 C 1 225 C2' - C3' - O3' ANGL. DEV. = 14.0 DEGREES REMARK 500 A 1 235 C5' - C4' - O4' ANGL. DEV. = 6.9 DEGREES REMARK 500 REMARK 500 THIS ENTRY HAS 953 ANGLE DEVIATIONS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CHIRAL CENTERS REMARK 500 REMARK 500 UNEXPECTED CONFIGURATION OF THE FOLLOWING CHIRAL REMARK 500 CENTER(S) USING IMPROPER CA--C--CB--N CHIRALITY REMARK 500 FOR AMINO ACIDS AND C1'--O4'--N1(N9)--C2' FOR REMARK 500 NUCLEIC ACIDS OR EQUIVALENT ANGLE REMARK 500 M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,6X,F5.1,6X,A1,10X,A1,3X,A16) REMARK 500 REMARK 500 M RES CSSEQI IMPROPER EXPECTED FOUND DETAILS REMARK 500 U 1 87 -23.2 D D OUTSIDE RANGE REMARK 500 A 1 107 -24.5 D D OUTSIDE RANGE REMARK 500 A 1 109 -21.9 D D OUTSIDE RANGE REMARK 500 A 1 121 -22.6 D D OUTSIDE RANGE REMARK 500 U 1 169 -23.0 D D OUTSIDE RANGE REMARK 500 U 1 181 -22.4 D D OUTSIDE RANGE REMARK 500 G 1 218 -23.2 D D OUTSIDE RANGE REMARK 500 G 1 241 -24.5 D D OUTSIDE RANGE REMARK 500 A 1 255 -23.9 D D OUTSIDE RANGE REMARK 500 U 1 280 -23.8 D D OUTSIDE RANGE REMARK 500 G 1 297 -22.4 D D OUTSIDE RANGE REMARK 500 A 1 313 -24.7 D D OUTSIDE RANGE REMARK 500 C 1 321 -22.7 D D OUTSIDE RANGE REMARK 500 U 1 343 -23.1 D D OUTSIDE RANGE REMARK 500 A 1 396 -23.8 D D OUTSIDE RANGE REMARK 500 A 1 397 -22.8 D D OUTSIDE RANGE REMARK 500 C 1 403 -22.4 D D OUTSIDE RANGE REMARK 500 G 1 511 -22.0 D D OUTSIDE RANGE REMARK 500 U 1 520 -21.3 D D OUTSIDE RANGE REMARK 500 U 1 536 -21.9 D D OUTSIDE RANGE REMARK 500 U 1 549 -18.5 D D OUTSIDE RANGE REMARK 500 G 1 583 -23.9 D D OUTSIDE RANGE REMARK 500 A 1 589 -23.2 D D OUTSIDE RANGE REMARK 500 G 1 632 -22.5 D D OUTSIDE RANGE REMARK 500 U 1 664 -21.7 D D OUTSIDE RANGE REMARK 500 G 1 676 -23.5 D D OUTSIDE RANGE REMARK 500 A 1 677 -20.8 D D OUTSIDE RANGE REMARK 500 A 1 710 -23.9 D D OUTSIDE RANGE REMARK 500 C 1 753 -24.5 D D OUTSIDE RANGE REMARK 500 G 1 760 -21.7 D D OUTSIDE RANGE REMARK 500 G 1 769 -22.8 D D OUTSIDE RANGE REMARK 500 U 1 794 -22.5 D D OUTSIDE RANGE REMARK 500 A 1 806 -23.9 D D OUTSIDE RANGE REMARK 500 U 1 850 -22.8 D D OUTSIDE RANGE REMARK 500 G 1 856 -24.6 D D OUTSIDE RANGE REMARK 500 U 1 862 -22.7 D D OUTSIDE RANGE REMARK 500 U 1 879 -21.7 D D OUTSIDE RANGE REMARK 500 A 1 883 -23.9 D D OUTSIDE RANGE REMARK 500 G 1 907 -23.3 D D OUTSIDE RANGE REMARK 500 A 1 920 -23.3 D D OUTSIDE RANGE REMARK 500 U 1 932 -22.1 D D OUTSIDE RANGE REMARK 500 C 1 961 -23.1 D D OUTSIDE RANGE REMARK 500 G 1 994 -22.0 D D OUTSIDE RANGE REMARK 500 A 11025 -22.3 D D OUTSIDE RANGE REMARK 500 C 11031 -22.4 D D OUTSIDE RANGE REMARK 500 U 11033 -23.5 D D OUTSIDE RANGE REMARK 500 C 11107 -20.2 D D OUTSIDE RANGE REMARK 500 A 11112 -23.4 D D OUTSIDE RANGE REMARK 500 U 11151 -22.6 D D OUTSIDE RANGE REMARK 500 A 11169 -24.9 D D OUTSIDE RANGE REMARK 500 REMARK 500 THIS ENTRY HAS 155 CHIRALITY DEVIATIONS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-2599 RELATED DB: EMDB REMARK 900 KLUYVEROMYCES LACTIS 80S RIBOSOME IN COMPLEX WITH CRPV-IRES REMARK 900 RELATED ID: 4CUW RELATED DB: PDB REMARK 900 KLUYVEROMYCES LACTIS 80S RIBOSOME IN COMPLEX WITH CRPV- REMARK 900 IRES REMARK 900 RELATED ID: 4CUX RELATED DB: PDB REMARK 900 KLUYVEROMYCES LACTIS 80S RIBOSOME IN COMPLEX WITH CRPV- REMARK 900 IRES REMARK 900 RELATED ID: 4CUY RELATED DB: PDB REMARK 900 KLUYVEROMYCES LACTIS 80S RIBOSOME IN COMPLEX WITH CRPV- REMARK 900 IRES DBREF 4CUV 1 1 3396 PDB 4CUV 4CUV 1 3396 DBREF 4CUV 3 1 121 PDB 4CUV 4CUV 1 121 DBREF 4CUV 4 1 158 PDB 4CUV 4CUV 1 158 SEQRES 1 1 3397 G U U U G A C C U C A A A SEQRES 2 1 3397 U C A G G U A G G A G U A SEQRES 3 1 3397 C C C G C U G A A C U U A SEQRES 4 1 3397 A G C A U A U C A A U A A SEQRES 5 1 3397 G C G G A G G A A A A G A SEQRES 6 1 3397 A A C C A A C C G G G A U SEQRES 7 1 3397 U G C C U U A G U A A C G SEQRES 8 1 3397 G C G A G U G A A G C G G SEQRES 9 1 3397 C A A A A G C U C A A A U SEQRES 10 1 3397 U U G A A A U C U G G U A SEQRES 11 1 3397 C C U U C G G U G C C C G SEQRES 12 1 3397 A G U U G U A A U U U G G SEQRES 13 1 3397 A G A G G G C A A C U U U SEQRES 14 1 3397 G G G G C C G U U C C U U SEQRES 15 1 3397 G U C U A U G U U C C U U SEQRES 16 1 3397 G G A A C A G G A C G U C SEQRES 17 1 3397 A U A G A G G G U G A G A SEQRES 18 1 3397 A U C C C G U G U G G C G SEQRES 19 1 3397 A G G A G U G C G G U U C SEQRES 20 1 3397 U U U G U A A A G U G C C SEQRES 21 1 3397 U U C G A A G A G U C G A SEQRES 22 1 3397 G U U G U U U G G G A A U SEQRES 23 1 3397 G C A G C U C U A A G U G SEQRES 24 1 3397 G G U G G U A A A U U C C SEQRES 25 1 3397 A U C U A A A G C U A A A SEQRES 26 1 3397 U A U U G G C G A G A G A SEQRES 27 1 3397 C C G A U A G C G A A C A SEQRES 28 1 3397 A G U A C A G U G A U G G SEQRES 29 1 3397 A A A G A U G A A A A G A SEQRES 30 1 3397 A C U U U G A A A A G A G SEQRES 31 1 3397 A G U G A A A A A G U A C SEQRES 32 1 3397 G U G A A A U U G U U G A SEQRES 33 1 3397 A A G G G A A G G G C A U SEQRES 34 1 3397 U U G A U C A G A C A U G SEQRES 35 1 3397 G U G U U U U G U G C C C SEQRES 36 1 3397 U C U G C U C C U U G U G SEQRES 37 1 3397 G G U A G G G G A A U C U SEQRES 38 1 3397 C G C A U U U C A C U G G SEQRES 39 1 3397 G C C A G C A U C A G U U SEQRES 40 1 3397 U U G G U G G C A G G A U SEQRES 41 1 3397 A A A U C C A U A G G A A SEQRES 42 1 3397 U G U A G C U U G C C U C SEQRES 43 1 3397 G G U A A G U A U U A U A SEQRES 44 1 3397 G C C U G U G G G A A U A SEQRES 45 1 3397 C U G C C A G C U G G G A SEQRES 46 1 3397 C U G A G G A C U G C G A SEQRES 47 1 3397 C G U A A G U C A A G G A SEQRES 48 1 3397 U G C U G G C A U A A U G SEQRES 49 1 3397 G U U A U A U G C C G C C SEQRES 50 1 3397 C G U C U U G A A A C A C SEQRES 51 1 3397 G G A C C A A G G A G U C SEQRES 52 1 3397 U A A C G U C U A U G C G SEQRES 53 1 3397 A G U G U U U G G G U G U SEQRES 54 1 3397 A A A A C C C A U A C G C SEQRES 55 1 3397 G U A A U G A A A G U G A SEQRES 56 1 3397 A C G U A G G U U G G G G SEQRES 57 1 3397 C C U C G C A A G A G G U SEQRES 58 1 3397 G C A C A A U C G A C C G SEQRES 59 1 3397 A U C C U G A U G U C U U SEQRES 60 1 3397 C G G A U G G A U U U G A SEQRES 61 1 3397 G U A A G A G C A U A G C SEQRES 62 1 3397 U G U U G G G A C C C G A SEQRES 63 1 3397 A A G A U G G U G A A C U SEQRES 64 1 3397 A U G C C U G A A U A G G SEQRES 65 1 3397 G U G A A G C C A G A G G SEQRES 66 1 3397 A A A C U C U G G U G G A SEQRES 67 1 3397 G G C U C G U A G C G G U SEQRES 68 1 3397 U C U G A C G U G C A A A SEQRES 69 1 3397 U C G A U C G U C G A A U SEQRES 70 1 3397 U U G G G U A U A G G G G SEQRES 71 1 3397 C G A A A G A C U A A U C SEQRES 72 1 3397 G A A C C A U C U A G U A SEQRES 73 1 3397 G C U G G U U C C U G C C SEQRES 74 1 3397 G A A G U U U C C C U C A SEQRES 75 1 3397 G G A U A G C A G A A G C SEQRES 76 1 3397 U C G U A U C A G U U U U SEQRES 77 1 3397 A U G A G G U A A A G C G SEQRES 78 1 3397 A A U G A U U A G A G G U SEQRES 79 1 3397 U C C G G G G U C G A A A SEQRES 80 1 3397 U G A C C U U G A C C U A SEQRES 81 1 3397 U U C U C A A A C U U U A SEQRES 82 1 3397 A A U A U G U A A G A A G SEQRES 83 1 3397 U C C U U G U U A C U U A SEQRES 84 1 3397 A U U G A A C G U G G A C SEQRES 85 1 3397 A U U U G A A U G A A G A SEQRES 86 1 3397 G C U U U U A G U G G G C SEQRES 87 1 3397 C A U U U U U G G U A A G SEQRES 88 1 3397 C A G A A C U G G C G A U SEQRES 89 1 3397 G C G G G A U G A A C C G SEQRES 90 1 3397 A A C G U A G A G U U A A SEQRES 91 1 3397 G G U G C C G G A A U A C SEQRES 92 1 3397 A C G C U C A U C A G A C SEQRES 93 1 3397 A C C A C A A A A G G U G SEQRES 94 1 3397 U U A G U U C A U C U A G SEQRES 95 1 3397 A C A G C C G G A C G G U SEQRES 96 1 3397 G G C C A U G G A A G U C SEQRES 97 1 3397 G G A A U C C G C U A A G SEQRES 98 1 3397 G A G U G U G U A A C A A SEQRES 99 1 3397 C U C A C C G G C C G A A SEQRES 100 1 3397 U G A A C U A G C C C U G SEQRES 101 1 3397 A A A A U G G A U G G C G SEQRES 102 1 3397 C U C A A G C G U G U U A SEQRES 103 1 3397 C C U A U A C U C U A C C SEQRES 104 1 3397 G U C A G G G U U G A U A SEQRES 105 1 3397 U G A U G C C C U G A C G SEQRES 106 1 3397 A G U A G G C A G G C G U SEQRES 107 1 3397 G G A G G U C A G U G A C SEQRES 108 1 3397 G A A G C C U A G A C C G SEQRES 109 1 3397 U A A G G U C G G G U C G SEQRES 110 1 3397 A A C G G C C U C U A G U SEQRES 111 1 3397 G C A G A U C U U G G U G SEQRES 112 1 3397 G U A G U A G C A A A U A SEQRES 113 1 3397 U U C A A A U G A G A A C SEQRES 114 1 3397 U U U G A A G A C U G A A SEQRES 115 1 3397 G U G G G G A A A G G U U SEQRES 116 1 3397 C C A C G U C A A C A G C SEQRES 117 1 3397 A G U U G G A C G U G G G SEQRES 118 1 3397 U U A G U C G A U C C U A SEQRES 119 1 3397 A G A G A U G G G G A A G SEQRES 120 1 3397 C U C C G U U U C A A A G SEQRES 121 1 3397 G C C U G A U U U U A U G SEQRES 122 1 3397 C A G G C C A C C A U C G SEQRES 123 1 3397 A A A G G G A A U C C G G SEQRES 124 1 3397 U U A A G A U U C C G G A SEQRES 125 1 3397 A C C U G G A U A U G G A SEQRES 126 1 3397 U U C U U C A C G G U A A SEQRES 127 1 3397 C G U A A C U G A A U G U SEQRES 128 1 3397 G G A G A C G U C G G C G SEQRES 129 1 3397 C G A G C C C U G G G A G SEQRES 130 1 3397 G A G U U A U C U U U U C SEQRES 131 1 3397 U U C U U A A C A G C U U SEQRES 132 1 3397 A U C A C C C C G G A A U SEQRES 133 1 3397 U G G U U U A U C C G G A SEQRES 134 1 3397 G A U G G G G U C U U A U SEQRES 135 1 3397 G G C U G G A A G A G G C SEQRES 136 1 3397 C A G C A C C U U U G C U SEQRES 137 1 3397 G G C U C C G G U G C G C SEQRES 138 1 3397 U U G U G A C G G C C C G SEQRES 139 1 3397 U G A A A A U C C A C A G SEQRES 140 1 3397 G A A G G A A U A G U U U SEQRES 141 1 3397 U C A U G C C A G G U C G SEQRES 142 1 3397 U A C U G A U A A C C G C SEQRES 143 1 3397 A G C A G G U C U C C A A SEQRES 144 1 3397 G G U G A A C A G C C U C SEQRES 145 1 3397 U A G U U G A U A G A A U SEQRES 146 1 3397 A A U G U A G A U A A G G SEQRES 147 1 3397 G A A G U C G G C A A A A SEQRES 148 1 3397 U A G A U C C G U A A C U SEQRES 149 1 3397 U C G G G A U A A G G A U SEQRES 150 1 3397 U G G C U C U A A G G G U SEQRES 151 1 3397 C G G G U A G U G A G G G SEQRES 152 1 3397 C C U U G G U C A G A C G SEQRES 153 1 3397 C A G C G G G C G U G C U SEQRES 154 1 3397 U G U G G A C U G C U U G SEQRES 155 1 3397 G U G G G G C U U G C U C SEQRES 156 1 3397 U G C U A G G C G G A C U SEQRES 157 1 3397 A C U U G C G U G C C U U SEQRES 158 1 3397 G U U G U A G A C G G C C SEQRES 159 1 3397 U U G G U A G G U C U C U SEQRES 160 1 3397 U G U A G A C C G U C G C SEQRES 161 1 3397 U U G C U A C A A U U A A SEQRES 162 1 3397 C G A U C A A C U U A G A SEQRES 163 1 3397 A C U G G U A C G G A C A SEQRES 164 1 3397 A G G G G A A U C U G A C SEQRES 165 1 3397 U G U C U A A U U A A A A SEQRES 166 1 3397 C A U A G C A U U G C G A SEQRES 167 1 3397 U G G U C A G A A A G U G SEQRES 168 1 3397 A U G U U G A C G C A A U SEQRES 169 1 3397 G U G A U U U C U G C C C SEQRES 170 1 3397 A G U G C U C U G A A U G SEQRES 171 1 3397 U C A A A G U G A A G A A SEQRES 172 1 3397 A U U C A A C C A A G C G SEQRES 173 1 3397 C G G G U A A A C G G C G SEQRES 174 1 3397 G G A G U A A C U A U G A SEQRES 175 1 3397 C U C U C U U A A G G U A SEQRES 176 1 3397 G C C A A A U G C C U C G SEQRES 177 1 3397 U C A U C U A A U U A G U SEQRES 178 1 3397 G A C G C G C A U G A A U SEQRES 179 1 3397 G G A U U A A C G A G A U SEQRES 180 1 3397 U C C C A C U G U C C C U SEQRES 181 1 3397 A U C U A C U A U C U A G SEQRES 182 1 3397 C G A A A C C A C A G C C SEQRES 183 1 3397 A A G G G A A C G G G C U SEQRES 184 1 3397 U G G C A G A A U C A G C SEQRES 185 1 3397 G G G G A A A G A A G A C SEQRES 186 1 3397 C C U G U U G A G C U U G SEQRES 187 1 3397 A C U C U A G U U U G A C SEQRES 188 1 3397 A U U G U G A A G A G A C SEQRES 189 1 3397 A A G G G A U G C G U A G SEQRES 190 1 3397 G A U A G G U G G G A G C SEQRES 191 1 3397 G C A A G C G C C G G U G SEQRES 192 1 3397 A A A U A C C A C C C U U SEQRES 193 1 3397 C C C A U A G U U U C U U SEQRES 194 1 3397 U A C C U U A U U C A A U SEQRES 195 1 3397 G A A G C G G A G C U G G SEQRES 196 1 3397 A A U U C A U U U U C C A SEQRES 197 1 3397 C G U U C U A G C A U U C SEQRES 198 1 3397 A A G G U C C C A U U C G SEQRES 199 1 3397 G G G C U G A U C C G G G SEQRES 200 1 3397 U U G A A G A C A U U G U SEQRES 201 1 3397 C A G G U G G G G A G U U SEQRES 202 1 3397 U G G C U G G G G C G G C SEQRES 203 1 3397 A C A U C U G U U A A A C SEQRES 204 1 3397 G A U A A C G C A G A U G SEQRES 205 1 3397 U C C U A A G G G G G G C SEQRES 206 1 3397 U C A U G G A G A A C A G SEQRES 207 1 3397 A A A U C U C C A G U A G SEQRES 208 1 3397 A A C A A A A G G G U A A SEQRES 209 1 3397 A A G C C C C C U U G A U SEQRES 210 1 3397 U U U G A U U U U C A G U SEQRES 211 1 3397 G U G A A U A C A A A C C SEQRES 212 1 3397 A U G A A A G U G U G G C SEQRES 213 1 3397 C U A U C G A U C C U U U SEQRES 214 1 3397 A G U C C C U C G G A A U SEQRES 215 1 3397 U U G A G G C U A G A G G SEQRES 216 1 3397 U G C C A G A A A A G U U SEQRES 217 1 3397 A C C A C A G G G A U A A SEQRES 218 1 3397 C U G G C U U G U G G C A SEQRES 219 1 3397 G U C A A G C G U U C A U SEQRES 220 1 3397 A G C G A C A U U G C U U SEQRES 221 1 3397 U U U G A U U C U U C G A SEQRES 222 1 3397 U G U C G G C U C U U C C SEQRES 223 1 3397 U A U C A U A C C G A A G SEQRES 224 1 3397 C A G A A U U C G G U A A SEQRES 225 1 3397 G C G U U G G A U U G U U SEQRES 226 1 3397 C A C C C A C U A A U A G SEQRES 227 1 3397 G G A A C G U G A G C U G SEQRES 228 1 3397 G G U U U A G A C C G U C SEQRES 229 1 3397 G U G A G A C A G G U U A SEQRES 230 1 3397 G U U U U A C C C U A C U SEQRES 231 1 3397 G A U G A A U G U U A C C SEQRES 232 1 3397 G C A A U A G U A A U U G SEQRES 233 1 3397 A A C U U A G U A C G A G SEQRES 234 1 3397 A G G A A C A G U U C A U SEQRES 235 1 3397 U C G G A U A A U U G G U SEQRES 236 1 3397 U U U U G C G G C U G U C SEQRES 237 1 3397 U G A U C A G G C A U U G SEQRES 238 1 3397 C C G C G A A G C U A C C SEQRES 239 1 3397 A U C C G C U G G A U U A SEQRES 240 1 3397 U G G C U G A A C G C C U SEQRES 241 1 3397 C U A A G U C A G A A U C SEQRES 242 1 3397 C A U G C U A G A A C G C SEQRES 243 1 3397 G G U G A U U U C U U U G SEQRES 244 1 3397 C U C C A C A C A A U A U SEQRES 245 1 3397 A G A U G G A U A C G A A SEQRES 246 1 3397 U A A G G C G U C C U U G SEQRES 247 1 3397 U G G C G U C G C U G A A SEQRES 248 1 3397 C C A U A G C A G G C U A SEQRES 249 1 3397 G C A A C G G U G C A C U SEQRES 250 1 3397 U G G C G G A A A G G C C SEQRES 251 1 3397 U U G G G U G C U U G C U SEQRES 252 1 3397 G G C G A A U U G C A A U SEQRES 253 1 3397 G U C A U U U U G C G U G SEQRES 254 1 3397 G G G A U A A A U C A U U SEQRES 255 1 3397 U G U A U A C G A C U U A SEQRES 256 1 3397 G A U G U A C A A C G G G SEQRES 257 1 3397 G U A U U G U A A G C A G SEQRES 258 1 3397 U A G A G U A G C C U U G SEQRES 259 1 3397 U U G U U A C G A U C U G SEQRES 260 1 3397 C U G A G A U U A A G C C SEQRES 261 1 3397 U U U G U U G U C U G A U SEQRES 262 1 3397 U U G U SEQRES 1 3 121 G G U U G C G G C C A U A SEQRES 2 3 121 U C U A C C A G A A A G C SEQRES 3 3 121 A C C G U U U C C C G U C SEQRES 4 3 121 C G A U C A A C U G U A G SEQRES 5 3 121 U U A A G C U G G U A A G SEQRES 6 3 121 A G C C U G A C C G A G U SEQRES 7 3 121 A G U G U A G U G G G U G SEQRES 8 3 121 A C C A U A C G C G A A A SEQRES 9 3 121 C U C A G G U G C U G C A SEQRES 10 3 121 A U C U SEQRES 1 4 158 A A A C U U U C A A C A A SEQRES 2 4 158 C G G A U C U C U U G G U SEQRES 3 4 158 U C U C G C A U C G A U G SEQRES 4 4 158 A A G A A C G C A G C G A SEQRES 5 4 158 A A U G C G A U A C G U A SEQRES 6 4 158 A U G U G A A U U G C A G SEQRES 7 4 158 A A U U C C G U G A A U C SEQRES 8 4 158 A U C G A A U C U U U G A SEQRES 9 4 158 A C G C A C A U U G C G C SEQRES 10 4 158 C C C U U G G U A U U C C SEQRES 11 4 158 A G G G G G C A U G C C U SEQRES 12 4 158 G U U U G A G C G U C A U SEQRES 13 4 158 U U CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000