HEADER TRANSFERASE 24-MAR-14 4CV8 TITLE MPS1 KINASE WITH 3-AMINOPYRIDIN-2-ONE INHIBITORS COMPND MOL_ID: 1; COMPND 2 MOLECULE: DUAL SPECIFICITY PROTEIN KINASE TTK; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: KINASE DOMAIN, RESIDUES 519-808; COMPND 5 SYNONYM: PHOSPHOTYROSINE PICKED THREONINE-PROTEIN KINASE, PYT, COMPND 6 MONOPOLAR SPINDLE KINASE 1; COMPND 7 EC: 2.7.12.1; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 8 EXPRESSION_SYSTEM_VARIANT: AI KEYWDS TRANSFERASE, INHIBITOR EXPDTA X-RAY DIFFRACTION AUTHOR D.FEARON,V.BAVETSIAS,R.BAYLISS,J.SCHMITT,I.M.WESTWOOD, AUTHOR 2 R.L.M.VANMONTFORT,K.JONES REVDAT 3 20-DEC-23 4CV8 1 REMARK REVDAT 2 08-MAY-19 4CV8 1 REMARK REVDAT 1 08-APR-15 4CV8 0 JRNL AUTH D.FEARON,V.BAVETSIAS,R.BAYLISS,J.SCHMITT,I.M.WESTWOOD, JRNL AUTH 2 R.L.M.VAN MONTFORT,K.JONES JRNL TITL PROTEIN KINASE SELECTIVITY OF A 3-AMINOPYRIDIN-2- ONE BASED JRNL TITL 2 FRAGMENT LIBRARY, IDENTIFICATION OF JRNL TITL 3 3-AMINO-5-(PYRIDIN-4-YL)PYRIDIN-2(1H)-ONE AS A NOVEL JRNL TITL 4 SCAFFOLD FOR MPS1 INHIBITION JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 3.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.11.4 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 41.23 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.6 REMARK 3 NUMBER OF REFLECTIONS : 9140 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.182 REMARK 3 R VALUE (WORKING SET) : 0.180 REMARK 3 FREE R VALUE : 0.226 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.760 REMARK 3 FREE R VALUE TEST SET COUNT : 435 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 5 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 3.00 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 3.35 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.64 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 2524 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2490 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2399 REMARK 3 BIN R VALUE (WORKING SET) : 0.2470 REMARK 3 BIN FREE R VALUE : 0.2902 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 4.95 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 125 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1908 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 30 REMARK 3 SOLVENT ATOMS : 6 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 122.1 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 95.97 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 34.67670 REMARK 3 B22 (A**2) : -36.42780 REMARK 3 B33 (A**2) : 1.75110 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.478 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : 0.640 REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.308 REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 0.648 REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : 0.313 REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.909 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.887 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 1978 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 2687 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 635 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : 38 ; 2.000 ; HARMONIC REMARK 3 GENERAL PLANES : 303 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 1978 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 272 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 2217 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 1.15 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 2.48 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 21.64 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A AND RESI 516 - 536 REMARK 3 ORIGIN FOR THE GROUP (A): 11.0078 -25.6094 -51.1296 REMARK 3 T TENSOR REMARK 3 T11: -0.0511 T22: 0.3033 REMARK 3 T33: -0.2764 T12: 0.1131 REMARK 3 T13: 0.0538 T23: 0.0523 REMARK 3 L TENSOR REMARK 3 L11: 6.5492 L22: 0.0000 REMARK 3 L33: 6.5192 L12: -1.6481 REMARK 3 L13: 1.9891 L23: 0.3957 REMARK 3 S TENSOR REMARK 3 S11: -0.0545 S12: 0.2227 S13: 0.1868 REMARK 3 S21: -0.0427 S22: 0.0628 S23: -0.1616 REMARK 3 S31: 0.0388 S32: 0.1508 S33: -0.0083 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN A AND RESI 537 - 641 REMARK 3 ORIGIN FOR THE GROUP (A): 1.1509 -24.1272 -40.2422 REMARK 3 T TENSOR REMARK 3 T11: -0.0907 T22: -0.1836 REMARK 3 T33: -0.2517 T12: 0.0266 REMARK 3 T13: -0.0744 T23: 0.0932 REMARK 3 L TENSOR REMARK 3 L11: 8.3155 L22: 0.5202 REMARK 3 L33: 5.3687 L12: -1.1189 REMARK 3 L13: -2.1214 L23: -0.5281 REMARK 3 S TENSOR REMARK 3 S11: -0.0756 S12: 0.5442 S13: 0.5385 REMARK 3 S21: -0.1029 S22: 0.0492 S23: -0.0250 REMARK 3 S31: 0.1681 S32: -0.0092 S33: 0.0264 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN A AND RESI 642 - 794 REMARK 3 ORIGIN FOR THE GROUP (A): -11.8204 -11.4968 -30.6444 REMARK 3 T TENSOR REMARK 3 T11: -0.1753 T22: -0.2147 REMARK 3 T33: -0.0083 T12: 0.0972 REMARK 3 T13: 0.0952 T23: 0.1283 REMARK 3 L TENSOR REMARK 3 L11: 2.9571 L22: 3.9127 REMARK 3 L33: 4.4584 L12: 0.5627 REMARK 3 L13: 0.3889 L23: -1.0177 REMARK 3 S TENSOR REMARK 3 S11: 0.2750 S12: 0.5373 S13: 0.5442 REMARK 3 S21: 0.0111 S22: -0.0410 S23: 0.0509 REMARK 3 S31: -0.5333 S32: -0.5440 S33: -0.2341 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4CV8 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 24-MAR-14. REMARK 100 THE DEPOSITION ID IS D_1290060113. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 29-JUL-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I24 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9686 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 9187 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.000 REMARK 200 RESOLUTION RANGE LOW (A) : 41.230 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : 4.400 REMARK 200 R MERGE (I) : 0.14000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.18 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.7 REMARK 200 DATA REDUNDANCY IN SHELL : 4.40 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 2ZMC REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 67.40 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.77 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M NACO2H, 0.1M BTP PH 7.5, 15% W/V REMARK 280 PEG3350, 1% DMSO AND 1MM (N-(2-OXO-5-(PYRIDIN-4-YL)-1, 2- REMARK 280 DIHYDROPYRIDIN-3-YL)-4-PIPERIDIN-1-YL)BENZAMIDE. THEN BACK-SOAK REMARK 280 IN A NEW SOLUTION OF 0.19M NACO2H, 0.095M BTP PH 7.5, 14.25% REMARK 280 PEG3350 AND 2MM 3-AMINO-5-(1-METHYL-1H-PYRAZOL-4-YL) PYRIDIN- REMARK 280 2(1H)-ONE FOR 24H ALL AT 18 DEGREES C., TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 35.40000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 55.15000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 57.10000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 35.40000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 55.15000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 57.10000 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 35.40000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 55.15000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 57.10000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 35.40000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 55.15000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 57.10000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 496 REMARK 465 HIS A 497 REMARK 465 HIS A 498 REMARK 465 HIS A 499 REMARK 465 HIS A 500 REMARK 465 HIS A 501 REMARK 465 HIS A 502 REMARK 465 SER A 503 REMARK 465 SER A 504 REMARK 465 GLY A 505 REMARK 465 VAL A 506 REMARK 465 ASP A 507 REMARK 465 LEU A 508 REMARK 465 GLY A 509 REMARK 465 THR A 510 REMARK 465 GLU A 511 REMARK 465 ASN A 512 REMARK 465 LEU A 513 REMARK 465 TYR A 514 REMARK 465 PHE A 515 REMARK 465 GLN A 672 REMARK 465 PRO A 673 REMARK 465 ASP A 674 REMARK 465 THR A 675 REMARK 465 THR A 676 REMARK 465 SER A 677 REMARK 465 VAL A 678 REMARK 465 VAL A 679 REMARK 465 LYS A 680 REMARK 465 ASP A 681 REMARK 465 SER A 682 REMARK 465 GLN A 683 REMARK 465 VAL A 684 REMARK 465 SER A 700 REMARK 465 SER A 701 REMARK 465 ARG A 702 REMARK 465 GLU A 703 REMARK 465 ASN A 704 REMARK 465 GLY A 705 REMARK 465 LYS A 706 REMARK 465 SER A 707 REMARK 465 LYS A 708 REMARK 465 SER A 709 REMARK 465 LYS A 710 REMARK 465 THR A 795 REMARK 465 HIS A 796 REMARK 465 PRO A 797 REMARK 465 VAL A 798 REMARK 465 ASN A 799 REMARK 465 GLN A 800 REMARK 465 MET A 801 REMARK 465 ALA A 802 REMARK 465 LYS A 803 REMARK 465 GLY A 804 REMARK 465 THR A 805 REMARK 465 THR A 806 REMARK 465 GLU A 807 REMARK 465 GLU A 808 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN A 516 CG CD OE1 NE2 REMARK 470 LYS A 529 CG CD CE NZ REMARK 470 GLU A 545 CD OE1 OE2 REMARK 470 LYS A 546 CG CD CE NZ REMARK 470 LYS A 547 CG CD CE NZ REMARK 470 GLU A 558 CG CD OE1 OE2 REMARK 470 GLU A 559 CG CD OE1 OE2 REMARK 470 GLN A 563 CD OE1 NE2 REMARK 470 GLU A 571 CG CD OE1 OE2 REMARK 470 LYS A 577 CE NZ REMARK 470 ASP A 583 CG OD1 OD2 REMARK 470 ARG A 587 NE CZ NH1 NH2 REMARK 470 LYS A 614 CG CD CE NZ REMARK 470 LYS A 615 CD CE NZ REMARK 470 LYS A 616 CE NZ REMARK 470 LYS A 617 CG CD CE NZ REMARK 470 ILE A 619 CG1 CG2 CD1 REMARK 470 TRP A 622 CG CD1 CD2 NE1 CE2 CE3 CZ2 REMARK 470 TRP A 622 CZ3 CH2 REMARK 470 GLU A 623 CG CD OE1 OE2 REMARK 470 LYS A 625 NZ REMARK 470 LYS A 629 CE NZ REMARK 470 ASP A 647 CG OD1 OD2 REMARK 470 LYS A 649 NZ REMARK 470 ASP A 657 CG OD1 OD2 REMARK 470 GLN A 670 CG CD OE1 NE2 REMARK 470 MET A 671 CG SD CE REMARK 470 MET A 690 CG SD CE REMARK 470 LYS A 696 CG CD CE NZ REMARK 470 ASP A 697 CG OD1 OD2 REMARK 470 ILE A 711 CG1 CG2 CD1 REMARK 470 LYS A 731 CE NZ REMARK 470 GLN A 735 CG CD OE1 NE2 REMARK 470 ILE A 738 CG1 CG2 CD1 REMARK 470 GLN A 740 CG CD OE1 NE2 REMARK 470 ILE A 741 CG1 CG2 CD1 REMARK 470 HIS A 745 CG ND1 CD2 CE1 NE2 REMARK 470 ILE A 748 CG1 CG2 CD1 REMARK 470 ASP A 749 CG OD1 OD2 REMARK 470 ASN A 751 CG OD1 ND2 REMARK 470 GLU A 753 CG CD OE1 OE2 REMARK 470 ILE A 754 CG1 CG2 CD1 REMARK 470 GLU A 755 CG CD OE1 OE2 REMARK 470 ASP A 758 CG OD1 OD2 REMARK 470 ILE A 759 CG1 CG2 CD1 REMARK 470 GLU A 761 OE1 OE2 REMARK 470 LYS A 762 CG CD CE NZ REMARK 470 LYS A 769 CG CD CE NZ REMARK 470 LYS A 773 CD CE NZ REMARK 470 LYS A 777 CG CD CE NZ REMARK 470 GLN A 778 CG CD OE1 NE2 REMARK 470 GLN A 794 CG CD OE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 517 141.64 -170.53 REMARK 500 SER A 582 127.59 -172.29 REMARK 500 SER A 646 -61.83 71.23 REMARK 500 ASP A 697 30.02 -85.63 REMARK 500 ASP A 758 109.81 -52.10 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 3D7 A 1795 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 1796 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 1797 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 1798 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 1799 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4CV9 RELATED DB: PDB REMARK 900 MPS1 KINASE WITH 3-AMINOPYRIDIN-2-ONE INHIBITORS REMARK 900 RELATED ID: 4CVA RELATED DB: PDB REMARK 900 MPS1 KINASE WITH 3-AMINOPYRIDIN-2-ONE INHIBITORS REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE SEQUENCE INCLUDING HEXAHISTIDINE TAG IS AS DESCRIBED REMARK 999 IN NAT. CHEM. BIOL. 2010, 6, 259-368. DBREF 4CV8 A 519 808 UNP P33981 TTK_HUMAN 519 808 SEQADV 4CV8 MET A 496 UNP P33981 EXPRESSION TAG SEQADV 4CV8 HIS A 497 UNP P33981 EXPRESSION TAG SEQADV 4CV8 HIS A 498 UNP P33981 EXPRESSION TAG SEQADV 4CV8 HIS A 499 UNP P33981 EXPRESSION TAG SEQADV 4CV8 HIS A 500 UNP P33981 EXPRESSION TAG SEQADV 4CV8 HIS A 501 UNP P33981 EXPRESSION TAG SEQADV 4CV8 HIS A 502 UNP P33981 EXPRESSION TAG SEQADV 4CV8 SER A 503 UNP P33981 EXPRESSION TAG SEQADV 4CV8 SER A 504 UNP P33981 EXPRESSION TAG SEQADV 4CV8 GLY A 505 UNP P33981 EXPRESSION TAG SEQADV 4CV8 VAL A 506 UNP P33981 EXPRESSION TAG SEQADV 4CV8 ASP A 507 UNP P33981 EXPRESSION TAG SEQADV 4CV8 LEU A 508 UNP P33981 EXPRESSION TAG SEQADV 4CV8 GLY A 509 UNP P33981 EXPRESSION TAG SEQADV 4CV8 THR A 510 UNP P33981 EXPRESSION TAG SEQADV 4CV8 GLU A 511 UNP P33981 EXPRESSION TAG SEQADV 4CV8 ASN A 512 UNP P33981 EXPRESSION TAG SEQADV 4CV8 LEU A 513 UNP P33981 EXPRESSION TAG SEQADV 4CV8 TYR A 514 UNP P33981 EXPRESSION TAG SEQADV 4CV8 PHE A 515 UNP P33981 EXPRESSION TAG SEQADV 4CV8 GLN A 516 UNP P33981 EXPRESSION TAG SEQADV 4CV8 SER A 517 UNP P33981 EXPRESSION TAG SEQADV 4CV8 MET A 518 UNP P33981 EXPRESSION TAG SEQRES 1 A 313 MET HIS HIS HIS HIS HIS HIS SER SER GLY VAL ASP LEU SEQRES 2 A 313 GLY THR GLU ASN LEU TYR PHE GLN SER MET SER VAL LYS SEQRES 3 A 313 GLY ARG ILE TYR SER ILE LEU LYS GLN ILE GLY SER GLY SEQRES 4 A 313 GLY SER SER LYS VAL PHE GLN VAL LEU ASN GLU LYS LYS SEQRES 5 A 313 GLN ILE TYR ALA ILE LYS TYR VAL ASN LEU GLU GLU ALA SEQRES 6 A 313 ASP ASN GLN THR LEU ASP SER TYR ARG ASN GLU ILE ALA SEQRES 7 A 313 TYR LEU ASN LYS LEU GLN GLN HIS SER ASP LYS ILE ILE SEQRES 8 A 313 ARG LEU TYR ASP TYR GLU ILE THR ASP GLN TYR ILE TYR SEQRES 9 A 313 MET VAL MET GLU CYS GLY ASN ILE ASP LEU ASN SER TRP SEQRES 10 A 313 LEU LYS LYS LYS LYS SER ILE ASP PRO TRP GLU ARG LYS SEQRES 11 A 313 SER TYR TRP LYS ASN MET LEU GLU ALA VAL HIS THR ILE SEQRES 12 A 313 HIS GLN HIS GLY ILE VAL HIS SER ASP LEU LYS PRO ALA SEQRES 13 A 313 ASN PHE LEU ILE VAL ASP GLY MET LEU LYS LEU ILE ASP SEQRES 14 A 313 PHE GLY ILE ALA ASN GLN MET GLN PRO ASP THR THR SER SEQRES 15 A 313 VAL VAL LYS ASP SER GLN VAL GLY THR VAL ASN TYR MET SEQRES 16 A 313 PRO PRO GLU ALA ILE LYS ASP MET SER SER SER ARG GLU SEQRES 17 A 313 ASN GLY LYS SER LYS SER LYS ILE SER PRO LYS SER ASP SEQRES 18 A 313 VAL TRP SER LEU GLY CYS ILE LEU TYR TYR MET THR TYR SEQRES 19 A 313 GLY LYS THR PRO PHE GLN GLN ILE ILE ASN GLN ILE SER SEQRES 20 A 313 LYS LEU HIS ALA ILE ILE ASP PRO ASN HIS GLU ILE GLU SEQRES 21 A 313 PHE PRO ASP ILE PRO GLU LYS ASP LEU GLN ASP VAL LEU SEQRES 22 A 313 LYS CYS CYS LEU LYS ARG ASP PRO LYS GLN ARG ILE SER SEQRES 23 A 313 ILE PRO GLU LEU LEU ALA HIS PRO TYR VAL GLN ILE GLN SEQRES 24 A 313 THR HIS PRO VAL ASN GLN MET ALA LYS GLY THR THR GLU SEQRES 25 A 313 GLU HET 3D7 A1795 14 HET EDO A1796 4 HET EDO A1797 4 HET EDO A1798 4 HET EDO A1799 4 HETNAM 3D7 3-AMINO-5-(1-METHYL-1H-PYRAZOL-4-YL)PYRIDIN-2(1H)-ONE HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 2 3D7 C9 H10 N4 O FORMUL 3 EDO 4(C2 H6 O2) FORMUL 7 HOH *6(H2 O) HELIX 1 1 ASP A 561 LEU A 578 1 18 HELIX 2 2 GLN A 579 SER A 582 5 4 HELIX 3 3 LEU A 609 LYS A 616 1 8 HELIX 4 4 ASP A 620 HIS A 641 1 22 HELIX 5 5 LYS A 649 ALA A 651 5 3 HELIX 6 6 PRO A 691 ASP A 697 1 7 HELIX 7 7 SER A 712 TYR A 729 1 18 HELIX 8 8 ASN A 739 ASP A 749 1 11 HELIX 9 9 GLU A 761 LEU A 772 1 12 HELIX 10 10 ASP A 775 ARG A 779 5 5 HELIX 11 11 SER A 781 LEU A 786 1 6 HELIX 12 12 HIS A 788 ILE A 793 1 6 SHEET 1 AA 6 MET A 518 VAL A 520 0 SHEET 2 AA 6 ARG A 523 GLY A 534 -1 O ARG A 523 N VAL A 520 SHEET 3 AA 6 SER A 537 LEU A 543 -1 O SER A 537 N GLY A 534 SHEET 4 AA 6 ILE A 549 ASN A 556 -1 O TYR A 550 N VAL A 542 SHEET 5 AA 6 TYR A 597 MET A 602 -1 O ILE A 598 N VAL A 555 SHEET 6 AA 6 LEU A 588 ILE A 593 -1 N TYR A 589 O VAL A 601 SHEET 1 AB 3 ILE A 607 ASP A 608 0 SHEET 2 AB 3 PHE A 653 VAL A 656 -1 N ILE A 655 O ILE A 607 SHEET 3 AB 3 MET A 659 LEU A 662 -1 O MET A 659 N VAL A 656 SITE 1 AC1 7 ALA A 551 MET A 602 GLU A 603 CYS A 604 SITE 2 AC1 7 GLY A 605 LEU A 654 ILE A 663 SITE 1 AC2 1 TYR A 599 SITE 1 AC3 6 LYS A 547 ILE A 549 TYR A 550 TYR A 589 SITE 2 AC3 6 GLU A 603 CYS A 604 SITE 1 AC4 4 LYS A 521 ASP A 590 TYR A 591 GLU A 784 SITE 1 AC5 1 GLN A 640 CRYST1 70.800 110.300 114.200 90.00 90.00 90.00 I 2 2 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014124 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009066 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008757 0.00000