data_4CVK # _entry.id 4CVK # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.384 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4CVK pdb_00004cvk 10.2210/pdb4cvk/pdb PDBE EBI-59027 ? ? WWPDB D_1290059027 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2015-04-22 2 'Structure model' 1 1 2015-04-29 3 'Structure model' 1 2 2015-09-23 4 'Structure model' 1 3 2020-07-29 5 'Structure model' 2 0 2022-12-07 6 'Structure model' 3 0 2023-11-15 7 'Structure model' 3 1 2024-01-31 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 4 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Structure summary' 2 3 'Structure model' 'Data collection' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Derived calculations' 5 4 'Structure model' Other 6 4 'Structure model' 'Structure summary' 7 5 'Structure model' 'Atomic model' 8 5 'Structure model' 'Data collection' 9 5 'Structure model' 'Database references' 10 5 'Structure model' 'Derived calculations' 11 5 'Structure model' 'Polymer sequence' 12 5 'Structure model' 'Source and taxonomy' 13 5 'Structure model' 'Structure summary' 14 6 'Structure model' 'Atomic model' 15 6 'Structure model' 'Data collection' 16 6 'Structure model' 'Derived calculations' 17 7 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp 2 4 'Structure model' entity 3 4 'Structure model' pdbx_chem_comp_identifier 4 4 'Structure model' pdbx_database_status 5 4 'Structure model' pdbx_entity_nonpoly 6 4 'Structure model' struct_conn 7 4 'Structure model' struct_site 8 4 'Structure model' struct_site_gen 9 5 'Structure model' atom_site 10 5 'Structure model' chem_comp 11 5 'Structure model' database_2 12 5 'Structure model' entity 13 5 'Structure model' entity_poly 14 5 'Structure model' entity_poly_seq 15 5 'Structure model' entity_src_gen 16 5 'Structure model' pdbx_entity_nonpoly 17 5 'Structure model' pdbx_entity_src_syn 18 5 'Structure model' pdbx_nonpoly_scheme 19 5 'Structure model' pdbx_poly_seq_scheme 20 5 'Structure model' pdbx_struct_assembly 21 5 'Structure model' pdbx_struct_assembly_gen 22 5 'Structure model' pdbx_struct_assembly_prop 23 5 'Structure model' struct_asym 24 5 'Structure model' struct_conn 25 5 'Structure model' struct_ref 26 5 'Structure model' struct_ref_seq 27 6 'Structure model' atom_site 28 6 'Structure model' chem_comp_atom 29 6 'Structure model' chem_comp_bond 30 6 'Structure model' struct_conn 31 7 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_chem_comp.name' 2 4 'Structure model' '_chem_comp.type' 3 4 'Structure model' '_entity.pdbx_description' 4 4 'Structure model' '_pdbx_database_status.status_code_sf' 5 4 'Structure model' '_pdbx_entity_nonpoly.name' 6 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 7 5 'Structure model' '_atom_site.B_iso_or_equiv' 8 5 'Structure model' '_atom_site.Cartn_x' 9 5 'Structure model' '_atom_site.Cartn_y' 10 5 'Structure model' '_atom_site.Cartn_z' 11 5 'Structure model' '_atom_site.auth_asym_id' 12 5 'Structure model' '_atom_site.auth_atom_id' 13 5 'Structure model' '_atom_site.auth_comp_id' 14 5 'Structure model' '_atom_site.auth_seq_id' 15 5 'Structure model' '_atom_site.group_PDB' 16 5 'Structure model' '_atom_site.label_asym_id' 17 5 'Structure model' '_atom_site.label_atom_id' 18 5 'Structure model' '_atom_site.label_comp_id' 19 5 'Structure model' '_atom_site.label_entity_id' 20 5 'Structure model' '_atom_site.label_seq_id' 21 5 'Structure model' '_atom_site.type_symbol' 22 5 'Structure model' '_chem_comp.pdbx_synonyms' 23 5 'Structure model' '_database_2.pdbx_DOI' 24 5 'Structure model' '_database_2.pdbx_database_accession' 25 5 'Structure model' '_entity_src_gen.pdbx_beg_seq_num' 26 5 'Structure model' '_entity_src_gen.pdbx_end_seq_num' 27 5 'Structure model' '_entity_src_gen.pdbx_gene_src_gene' 28 5 'Structure model' '_entity_src_gen.pdbx_gene_src_scientific_name' 29 5 'Structure model' '_entity_src_gen.pdbx_seq_type' 30 5 'Structure model' '_pdbx_struct_assembly.details' 31 5 'Structure model' '_pdbx_struct_assembly.oligomeric_count' 32 5 'Structure model' '_pdbx_struct_assembly.oligomeric_details' 33 5 'Structure model' '_pdbx_struct_assembly_gen.asym_id_list' 34 5 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 35 5 'Structure model' '_struct_conn.ptnr1_label_asym_id' 36 5 'Structure model' '_struct_conn.ptnr1_label_seq_id' 37 5 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 38 5 'Structure model' '_struct_conn.ptnr2_label_asym_id' 39 5 'Structure model' '_struct_conn.ptnr2_label_seq_id' 40 6 'Structure model' '_atom_site.auth_atom_id' 41 6 'Structure model' '_atom_site.label_atom_id' 42 6 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 43 6 'Structure model' '_struct_conn.ptnr2_label_atom_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4CVK _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2014-03-28 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.content_type _pdbx_database_related.details PDB 4CVL unspecified 'PAMURF IN COMPLEX WITH AMP-PNP' PDB 4CVM unspecified 'PAMURF IN COMPLEX WITH AMP-PNP AND UDP-MURNAC- TRIPEPTIDE (MDAP)' # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Ruane, K.M.' 1 'Majce, V.' 2 # _citation.id primary _citation.title 'Pamurf in Complex with Udp-Murnac-Tripeptide (Mdap)' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Majce, V.' 1 ? primary 'Ruane, K.' 2 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase' 49365.984 1 ? ? ? ? 2 polymer syn ALA-FGA-API 390.389 1 ? ? ? ? 3 non-polymer syn "URIDINE-5'-DIPHOSPHATE" 404.161 1 ? ? ? ? 4 non-polymer syn 'N-acetyl-alpha-muramic acid' 293.270 1 ? ? ? ? 5 water nat water 18.015 84 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;MLEPLRLSQLTVALDARLIGEDAVFSAVSTDSRAIGPGELFIALSGPRFDGHDYLAEVAAKGAVAALVEREVADAPLPQL LVRDTRAALGRLGALNRRKFTGPLAAMTGSSGKTTVKEMLASILRTQAGDAESVLATRGNLNNDLGVPLTLLQLAPQHRS AVIELGASRIGEIAYTVELTRPHVAIITNAGTAHVGEFGGPEKIVEAKGEILEGLAADGTAVLNLDDKAFDTWKARASGR PLLTFSLDRPQADFRAADLQRDARGCMGFRLQGVAGEAQVQLNLLGRHNVANALAAAAAAHALGVPLDGIVAGLQALQPV KGRAVAQLTASGLRVIDDSYNANPASMLAAIDILSGFSGRTVLVLGDMGELGSWAEQAHREVGAYAAGKVSALYAVGPLM AHAVQAFGATGRHFADQASLIGALATEDPTTTILIKGSRSAAMDKVVAALCGSSEESHSSVDKLAAALEHHHHHH ; ;MLEPLRLSQLTVALDARLIGEDAVFSAVSTDSRAIGPGELFIALSGPRFDGHDYLAEVAAKGAVAALVEREVADAPLPQL LVRDTRAALGRLGALNRRKFTGPLAAMTGSSGKTTVKEMLASILRTQAGDAESVLATRGNLNNDLGVPLTLLQLAPQHRS AVIELGASRIGEIAYTVELTRPHVAIITNAGTAHVGEFGGPEKIVEAKGEILEGLAADGTAVLNLDDKAFDTWKARASGR PLLTFSLDRPQADFRAADLQRDARGCMGFRLQGVAGEAQVQLNLLGRHNVANALAAAAAAHALGVPLDGIVAGLQALQPV KGRAVAQLTASGLRVIDDSYNANPASMLAAIDILSGFSGRTVLVLGDMGELGSWAEQAHREVGAYAAGKVSALYAVGPLM AHAVQAFGATGRHFADQASLIGALATEDPTTTILIKGSRSAAMDKVVAALCGSSEESHSSVDKLAAALEHHHHHH ; A ? 2 'polypeptide(L)' no yes 'A(FGA)(API)' AEK B ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 "URIDINE-5'-DIPHOSPHATE" UDP 4 'N-acetyl-alpha-muramic acid' MUB 5 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 LEU n 1 3 GLU n 1 4 PRO n 1 5 LEU n 1 6 ARG n 1 7 LEU n 1 8 SER n 1 9 GLN n 1 10 LEU n 1 11 THR n 1 12 VAL n 1 13 ALA n 1 14 LEU n 1 15 ASP n 1 16 ALA n 1 17 ARG n 1 18 LEU n 1 19 ILE n 1 20 GLY n 1 21 GLU n 1 22 ASP n 1 23 ALA n 1 24 VAL n 1 25 PHE n 1 26 SER n 1 27 ALA n 1 28 VAL n 1 29 SER n 1 30 THR n 1 31 ASP n 1 32 SER n 1 33 ARG n 1 34 ALA n 1 35 ILE n 1 36 GLY n 1 37 PRO n 1 38 GLY n 1 39 GLU n 1 40 LEU n 1 41 PHE n 1 42 ILE n 1 43 ALA n 1 44 LEU n 1 45 SER n 1 46 GLY n 1 47 PRO n 1 48 ARG n 1 49 PHE n 1 50 ASP n 1 51 GLY n 1 52 HIS n 1 53 ASP n 1 54 TYR n 1 55 LEU n 1 56 ALA n 1 57 GLU n 1 58 VAL n 1 59 ALA n 1 60 ALA n 1 61 LYS n 1 62 GLY n 1 63 ALA n 1 64 VAL n 1 65 ALA n 1 66 ALA n 1 67 LEU n 1 68 VAL n 1 69 GLU n 1 70 ARG n 1 71 GLU n 1 72 VAL n 1 73 ALA n 1 74 ASP n 1 75 ALA n 1 76 PRO n 1 77 LEU n 1 78 PRO n 1 79 GLN n 1 80 LEU n 1 81 LEU n 1 82 VAL n 1 83 ARG n 1 84 ASP n 1 85 THR n 1 86 ARG n 1 87 ALA n 1 88 ALA n 1 89 LEU n 1 90 GLY n 1 91 ARG n 1 92 LEU n 1 93 GLY n 1 94 ALA n 1 95 LEU n 1 96 ASN n 1 97 ARG n 1 98 ARG n 1 99 LYS n 1 100 PHE n 1 101 THR n 1 102 GLY n 1 103 PRO n 1 104 LEU n 1 105 ALA n 1 106 ALA n 1 107 MET n 1 108 THR n 1 109 GLY n 1 110 SER n 1 111 SER n 1 112 GLY n 1 113 LYS n 1 114 THR n 1 115 THR n 1 116 VAL n 1 117 LYS n 1 118 GLU n 1 119 MET n 1 120 LEU n 1 121 ALA n 1 122 SER n 1 123 ILE n 1 124 LEU n 1 125 ARG n 1 126 THR n 1 127 GLN n 1 128 ALA n 1 129 GLY n 1 130 ASP n 1 131 ALA n 1 132 GLU n 1 133 SER n 1 134 VAL n 1 135 LEU n 1 136 ALA n 1 137 THR n 1 138 ARG n 1 139 GLY n 1 140 ASN n 1 141 LEU n 1 142 ASN n 1 143 ASN n 1 144 ASP n 1 145 LEU n 1 146 GLY n 1 147 VAL n 1 148 PRO n 1 149 LEU n 1 150 THR n 1 151 LEU n 1 152 LEU n 1 153 GLN n 1 154 LEU n 1 155 ALA n 1 156 PRO n 1 157 GLN n 1 158 HIS n 1 159 ARG n 1 160 SER n 1 161 ALA n 1 162 VAL n 1 163 ILE n 1 164 GLU n 1 165 LEU n 1 166 GLY n 1 167 ALA n 1 168 SER n 1 169 ARG n 1 170 ILE n 1 171 GLY n 1 172 GLU n 1 173 ILE n 1 174 ALA n 1 175 TYR n 1 176 THR n 1 177 VAL n 1 178 GLU n 1 179 LEU n 1 180 THR n 1 181 ARG n 1 182 PRO n 1 183 HIS n 1 184 VAL n 1 185 ALA n 1 186 ILE n 1 187 ILE n 1 188 THR n 1 189 ASN n 1 190 ALA n 1 191 GLY n 1 192 THR n 1 193 ALA n 1 194 HIS n 1 195 VAL n 1 196 GLY n 1 197 GLU n 1 198 PHE n 1 199 GLY n 1 200 GLY n 1 201 PRO n 1 202 GLU n 1 203 LYS n 1 204 ILE n 1 205 VAL n 1 206 GLU n 1 207 ALA n 1 208 LYS n 1 209 GLY n 1 210 GLU n 1 211 ILE n 1 212 LEU n 1 213 GLU n 1 214 GLY n 1 215 LEU n 1 216 ALA n 1 217 ALA n 1 218 ASP n 1 219 GLY n 1 220 THR n 1 221 ALA n 1 222 VAL n 1 223 LEU n 1 224 ASN n 1 225 LEU n 1 226 ASP n 1 227 ASP n 1 228 LYS n 1 229 ALA n 1 230 PHE n 1 231 ASP n 1 232 THR n 1 233 TRP n 1 234 LYS n 1 235 ALA n 1 236 ARG n 1 237 ALA n 1 238 SER n 1 239 GLY n 1 240 ARG n 1 241 PRO n 1 242 LEU n 1 243 LEU n 1 244 THR n 1 245 PHE n 1 246 SER n 1 247 LEU n 1 248 ASP n 1 249 ARG n 1 250 PRO n 1 251 GLN n 1 252 ALA n 1 253 ASP n 1 254 PHE n 1 255 ARG n 1 256 ALA n 1 257 ALA n 1 258 ASP n 1 259 LEU n 1 260 GLN n 1 261 ARG n 1 262 ASP n 1 263 ALA n 1 264 ARG n 1 265 GLY n 1 266 CYS n 1 267 MET n 1 268 GLY n 1 269 PHE n 1 270 ARG n 1 271 LEU n 1 272 GLN n 1 273 GLY n 1 274 VAL n 1 275 ALA n 1 276 GLY n 1 277 GLU n 1 278 ALA n 1 279 GLN n 1 280 VAL n 1 281 GLN n 1 282 LEU n 1 283 ASN n 1 284 LEU n 1 285 LEU n 1 286 GLY n 1 287 ARG n 1 288 HIS n 1 289 ASN n 1 290 VAL n 1 291 ALA n 1 292 ASN n 1 293 ALA n 1 294 LEU n 1 295 ALA n 1 296 ALA n 1 297 ALA n 1 298 ALA n 1 299 ALA n 1 300 ALA n 1 301 HIS n 1 302 ALA n 1 303 LEU n 1 304 GLY n 1 305 VAL n 1 306 PRO n 1 307 LEU n 1 308 ASP n 1 309 GLY n 1 310 ILE n 1 311 VAL n 1 312 ALA n 1 313 GLY n 1 314 LEU n 1 315 GLN n 1 316 ALA n 1 317 LEU n 1 318 GLN n 1 319 PRO n 1 320 VAL n 1 321 LYS n 1 322 GLY n 1 323 ARG n 1 324 ALA n 1 325 VAL n 1 326 ALA n 1 327 GLN n 1 328 LEU n 1 329 THR n 1 330 ALA n 1 331 SER n 1 332 GLY n 1 333 LEU n 1 334 ARG n 1 335 VAL n 1 336 ILE n 1 337 ASP n 1 338 ASP n 1 339 SER n 1 340 TYR n 1 341 ASN n 1 342 ALA n 1 343 ASN n 1 344 PRO n 1 345 ALA n 1 346 SER n 1 347 MET n 1 348 LEU n 1 349 ALA n 1 350 ALA n 1 351 ILE n 1 352 ASP n 1 353 ILE n 1 354 LEU n 1 355 SER n 1 356 GLY n 1 357 PHE n 1 358 SER n 1 359 GLY n 1 360 ARG n 1 361 THR n 1 362 VAL n 1 363 LEU n 1 364 VAL n 1 365 LEU n 1 366 GLY n 1 367 ASP n 1 368 MET n 1 369 GLY n 1 370 GLU n 1 371 LEU n 1 372 GLY n 1 373 SER n 1 374 TRP n 1 375 ALA n 1 376 GLU n 1 377 GLN n 1 378 ALA n 1 379 HIS n 1 380 ARG n 1 381 GLU n 1 382 VAL n 1 383 GLY n 1 384 ALA n 1 385 TYR n 1 386 ALA n 1 387 ALA n 1 388 GLY n 1 389 LYS n 1 390 VAL n 1 391 SER n 1 392 ALA n 1 393 LEU n 1 394 TYR n 1 395 ALA n 1 396 VAL n 1 397 GLY n 1 398 PRO n 1 399 LEU n 1 400 MET n 1 401 ALA n 1 402 HIS n 1 403 ALA n 1 404 VAL n 1 405 GLN n 1 406 ALA n 1 407 PHE n 1 408 GLY n 1 409 ALA n 1 410 THR n 1 411 GLY n 1 412 ARG n 1 413 HIS n 1 414 PHE n 1 415 ALA n 1 416 ASP n 1 417 GLN n 1 418 ALA n 1 419 SER n 1 420 LEU n 1 421 ILE n 1 422 GLY n 1 423 ALA n 1 424 LEU n 1 425 ALA n 1 426 THR n 1 427 GLU n 1 428 ASP n 1 429 PRO n 1 430 THR n 1 431 THR n 1 432 THR n 1 433 ILE n 1 434 LEU n 1 435 ILE n 1 436 LYS n 1 437 GLY n 1 438 SER n 1 439 ARG n 1 440 SER n 1 441 ALA n 1 442 ALA n 1 443 MET n 1 444 ASP n 1 445 LYS n 1 446 VAL n 1 447 VAL n 1 448 ALA n 1 449 ALA n 1 450 LEU n 1 451 CYS n 1 452 GLY n 1 453 SER n 1 454 SER n 1 455 GLU n 1 456 GLU n 1 457 SER n 1 458 HIS n 1 459 SER n 1 460 SER n 1 461 VAL n 1 462 ASP n 1 463 LYS n 1 464 LEU n 1 465 ALA n 1 466 ALA n 1 467 ALA n 1 468 LEU n 1 469 GLU n 1 470 HIS n 1 471 HIS n 1 472 HIS n 1 473 HIS n 1 474 HIS n 1 475 HIS n 2 1 ALA n 2 2 FGA n 2 3 API n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 475 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene murF _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Pseudomonas aeruginosa PAO1' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 208964 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc 15692 _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'ESCHERICHIA COLI' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector PET _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _pdbx_entity_src_syn.entity_id 2 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 3 _pdbx_entity_src_syn.organism_scientific 'synthetic construct' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 32630 _pdbx_entity_src_syn.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 API 'L-peptide linking' n '2,6-DIAMINOPIMELIC ACID' ? 'C7 H14 N2 O4' 190.197 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 FGA 'D-gamma-peptide, C-delta linking' . 'GAMMA-D-GLUTAMIC ACID' 'D-GLUTAMIC ACID' 'C5 H9 N O4' 147.129 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MUB 'D-saccharide, alpha linking' . 'N-acetyl-alpha-muramic acid' 'N-acetyl-muramic acid; N-ACETYLMURAMIC ACID' 'C11 H19 N O8' 293.270 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 UDP 'RNA linking' . "URIDINE-5'-DIPHOSPHATE" ? 'C9 H14 N2 O12 P2' 404.161 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier MUB 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-D-GlcpNAc3<C3O2> MUB 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 MurNAc # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 1 MET MET A . n A 1 2 LEU 2 2 2 LEU LEU A . n A 1 3 GLU 3 3 3 GLU GLU A . n A 1 4 PRO 4 4 4 PRO PRO A . n A 1 5 LEU 5 5 5 LEU LEU A . n A 1 6 ARG 6 6 6 ARG ARG A . n A 1 7 LEU 7 7 7 LEU LEU A . n A 1 8 SER 8 8 8 SER SER A . n A 1 9 GLN 9 9 9 GLN GLN A . n A 1 10 LEU 10 10 10 LEU LEU A . n A 1 11 THR 11 11 11 THR THR A . n A 1 12 VAL 12 12 12 VAL VAL A . n A 1 13 ALA 13 13 13 ALA ALA A . n A 1 14 LEU 14 14 14 LEU LEU A . n A 1 15 ASP 15 15 15 ASP ASP A . n A 1 16 ALA 16 16 16 ALA ALA A . n A 1 17 ARG 17 17 17 ARG ARG A . n A 1 18 LEU 18 18 18 LEU LEU A . n A 1 19 ILE 19 19 19 ILE ILE A . n A 1 20 GLY 20 20 20 GLY GLY A . n A 1 21 GLU 21 21 21 GLU GLU A . n A 1 22 ASP 22 22 22 ASP ASP A . n A 1 23 ALA 23 23 23 ALA ALA A . n A 1 24 VAL 24 24 24 VAL VAL A . n A 1 25 PHE 25 25 25 PHE PHE A . n A 1 26 SER 26 26 26 SER SER A . n A 1 27 ALA 27 27 27 ALA ALA A . n A 1 28 VAL 28 28 28 VAL VAL A . n A 1 29 SER 29 29 29 SER SER A . n A 1 30 THR 30 30 30 THR THR A . n A 1 31 ASP 31 31 31 ASP ASP A . n A 1 32 SER 32 32 32 SER SER A . n A 1 33 ARG 33 33 33 ARG ARG A . n A 1 34 ALA 34 34 34 ALA ALA A . n A 1 35 ILE 35 35 35 ILE ILE A . n A 1 36 GLY 36 36 36 GLY GLY A . n A 1 37 PRO 37 37 37 PRO PRO A . n A 1 38 GLY 38 38 38 GLY GLY A . n A 1 39 GLU 39 39 39 GLU GLU A . n A 1 40 LEU 40 40 40 LEU LEU A . n A 1 41 PHE 41 41 41 PHE PHE A . n A 1 42 ILE 42 42 42 ILE ILE A . n A 1 43 ALA 43 43 43 ALA ALA A . n A 1 44 LEU 44 44 44 LEU LEU A . n A 1 45 SER 45 45 45 SER SER A . n A 1 46 GLY 46 46 46 GLY GLY A . n A 1 47 PRO 47 47 47 PRO PRO A . n A 1 48 ARG 48 48 48 ARG ARG A . n A 1 49 PHE 49 49 49 PHE PHE A . n A 1 50 ASP 50 50 50 ASP ASP A . n A 1 51 GLY 51 51 51 GLY GLY A . n A 1 52 HIS 52 52 52 HIS HIS A . n A 1 53 ASP 53 53 53 ASP ASP A . n A 1 54 TYR 54 54 54 TYR TYR A . n A 1 55 LEU 55 55 55 LEU LEU A . n A 1 56 ALA 56 56 56 ALA ALA A . n A 1 57 GLU 57 57 57 GLU GLU A . n A 1 58 VAL 58 58 58 VAL VAL A . n A 1 59 ALA 59 59 59 ALA ALA A . n A 1 60 ALA 60 60 60 ALA ALA A . n A 1 61 LYS 61 61 61 LYS LYS A . n A 1 62 GLY 62 62 62 GLY GLY A . n A 1 63 ALA 63 63 63 ALA ALA A . n A 1 64 VAL 64 64 64 VAL VAL A . n A 1 65 ALA 65 65 65 ALA ALA A . n A 1 66 ALA 66 66 66 ALA ALA A . n A 1 67 LEU 67 67 67 LEU LEU A . n A 1 68 VAL 68 68 68 VAL VAL A . n A 1 69 GLU 69 69 69 GLU GLU A . n A 1 70 ARG 70 70 70 ARG ARG A . n A 1 71 GLU 71 71 71 GLU GLU A . n A 1 72 VAL 72 72 72 VAL VAL A . n A 1 73 ALA 73 73 73 ALA ALA A . n A 1 74 ASP 74 74 ? ? ? A . n A 1 75 ALA 75 75 75 ALA ALA A . n A 1 76 PRO 76 76 76 PRO PRO A . n A 1 77 LEU 77 77 77 LEU LEU A . n A 1 78 PRO 78 78 78 PRO PRO A . n A 1 79 GLN 79 79 79 GLN GLN A . n A 1 80 LEU 80 80 80 LEU LEU A . n A 1 81 LEU 81 81 81 LEU LEU A . n A 1 82 VAL 82 82 82 VAL VAL A . n A 1 83 ARG 83 83 83 ARG ARG A . n A 1 84 ASP 84 84 84 ASP ASP A . n A 1 85 THR 85 85 85 THR THR A . n A 1 86 ARG 86 86 86 ARG ARG A . n A 1 87 ALA 87 87 87 ALA ALA A . n A 1 88 ALA 88 88 88 ALA ALA A . n A 1 89 LEU 89 89 89 LEU LEU A . n A 1 90 GLY 90 90 90 GLY GLY A . n A 1 91 ARG 91 91 91 ARG ARG A . n A 1 92 LEU 92 92 92 LEU LEU A . n A 1 93 GLY 93 93 93 GLY GLY A . n A 1 94 ALA 94 94 94 ALA ALA A . n A 1 95 LEU 95 95 95 LEU LEU A . n A 1 96 ASN 96 96 96 ASN ASN A . n A 1 97 ARG 97 97 97 ARG ARG A . n A 1 98 ARG 98 98 98 ARG ARG A . n A 1 99 LYS 99 99 99 LYS LYS A . n A 1 100 PHE 100 100 100 PHE PHE A . n A 1 101 THR 101 101 101 THR THR A . n A 1 102 GLY 102 102 102 GLY GLY A . n A 1 103 PRO 103 103 103 PRO PRO A . n A 1 104 LEU 104 104 104 LEU LEU A . n A 1 105 ALA 105 105 105 ALA ALA A . n A 1 106 ALA 106 106 106 ALA ALA A . n A 1 107 MET 107 107 107 MET MET A . n A 1 108 THR 108 108 108 THR THR A . n A 1 109 GLY 109 109 109 GLY GLY A . n A 1 110 SER 110 110 110 SER SER A . n A 1 111 SER 111 111 111 SER SER A . n A 1 112 GLY 112 112 112 GLY GLY A . n A 1 113 LYS 113 113 113 LYS LYS A . n A 1 114 THR 114 114 114 THR THR A . n A 1 115 THR 115 115 115 THR THR A . n A 1 116 VAL 116 116 116 VAL VAL A . n A 1 117 LYS 117 117 117 LYS LYS A . n A 1 118 GLU 118 118 118 GLU GLU A . n A 1 119 MET 119 119 119 MET MET A . n A 1 120 LEU 120 120 120 LEU LEU A . n A 1 121 ALA 121 121 121 ALA ALA A . n A 1 122 SER 122 122 122 SER SER A . n A 1 123 ILE 123 123 123 ILE ILE A . n A 1 124 LEU 124 124 124 LEU LEU A . n A 1 125 ARG 125 125 125 ARG ARG A . n A 1 126 THR 126 126 126 THR THR A . n A 1 127 GLN 127 127 127 GLN GLN A . n A 1 128 ALA 128 128 128 ALA ALA A . n A 1 129 GLY 129 129 129 GLY GLY A . n A 1 130 ASP 130 130 130 ASP ASP A . n A 1 131 ALA 131 131 131 ALA ALA A . n A 1 132 GLU 132 132 132 GLU GLU A . n A 1 133 SER 133 133 133 SER SER A . n A 1 134 VAL 134 134 134 VAL VAL A . n A 1 135 LEU 135 135 135 LEU LEU A . n A 1 136 ALA 136 136 136 ALA ALA A . n A 1 137 THR 137 137 137 THR THR A . n A 1 138 ARG 138 138 138 ARG ARG A . n A 1 139 GLY 139 139 139 GLY GLY A . n A 1 140 ASN 140 140 140 ASN ASN A . n A 1 141 LEU 141 141 141 LEU LEU A . n A 1 142 ASN 142 142 142 ASN ASN A . n A 1 143 ASN 143 143 143 ASN ASN A . n A 1 144 ASP 144 144 144 ASP ASP A . n A 1 145 LEU 145 145 145 LEU LEU A . n A 1 146 GLY 146 146 146 GLY GLY A . n A 1 147 VAL 147 147 147 VAL VAL A . n A 1 148 PRO 148 148 148 PRO PRO A . n A 1 149 LEU 149 149 149 LEU LEU A . n A 1 150 THR 150 150 150 THR THR A . n A 1 151 LEU 151 151 151 LEU LEU A . n A 1 152 LEU 152 152 152 LEU LEU A . n A 1 153 GLN 153 153 153 GLN GLN A . n A 1 154 LEU 154 154 154 LEU LEU A . n A 1 155 ALA 155 155 155 ALA ALA A . n A 1 156 PRO 156 156 156 PRO PRO A . n A 1 157 GLN 157 157 157 GLN GLN A . n A 1 158 HIS 158 158 158 HIS HIS A . n A 1 159 ARG 159 159 159 ARG ARG A . n A 1 160 SER 160 160 160 SER SER A . n A 1 161 ALA 161 161 161 ALA ALA A . n A 1 162 VAL 162 162 162 VAL VAL A . n A 1 163 ILE 163 163 163 ILE ILE A . n A 1 164 GLU 164 164 164 GLU GLU A . n A 1 165 LEU 165 165 165 LEU LEU A . n A 1 166 GLY 166 166 166 GLY GLY A . n A 1 167 ALA 167 167 167 ALA ALA A . n A 1 168 SER 168 168 168 SER SER A . n A 1 169 ARG 169 169 169 ARG ARG A . n A 1 170 ILE 170 170 170 ILE ILE A . n A 1 171 GLY 171 171 171 GLY GLY A . n A 1 172 GLU 172 172 172 GLU GLU A . n A 1 173 ILE 173 173 173 ILE ILE A . n A 1 174 ALA 174 174 174 ALA ALA A . n A 1 175 TYR 175 175 175 TYR TYR A . n A 1 176 THR 176 176 176 THR THR A . n A 1 177 VAL 177 177 177 VAL VAL A . n A 1 178 GLU 178 178 178 GLU GLU A . n A 1 179 LEU 179 179 179 LEU LEU A . n A 1 180 THR 180 180 180 THR THR A . n A 1 181 ARG 181 181 181 ARG ARG A . n A 1 182 PRO 182 182 182 PRO PRO A . n A 1 183 HIS 183 183 183 HIS HIS A . n A 1 184 VAL 184 184 184 VAL VAL A . n A 1 185 ALA 185 185 185 ALA ALA A . n A 1 186 ILE 186 186 186 ILE ILE A . n A 1 187 ILE 187 187 187 ILE ILE A . n A 1 188 THR 188 188 188 THR THR A . n A 1 189 ASN 189 189 189 ASN ASN A . n A 1 190 ALA 190 190 190 ALA ALA A . n A 1 191 GLY 191 191 ? ? ? A . n A 1 192 THR 192 192 ? ? ? A . n A 1 193 ALA 193 193 ? ? ? A . n A 1 194 HIS 194 194 ? ? ? A . n A 1 195 VAL 195 195 ? ? ? A . n A 1 196 GLY 196 196 ? ? ? A . n A 1 197 GLU 197 197 ? ? ? A . n A 1 198 PHE 198 198 198 PHE PHE A . n A 1 199 GLY 199 199 199 GLY GLY A . n A 1 200 GLY 200 200 200 GLY GLY A . n A 1 201 PRO 201 201 201 PRO PRO A . n A 1 202 GLU 202 202 202 GLU GLU A . n A 1 203 LYS 203 203 203 LYS LYS A . n A 1 204 ILE 204 204 204 ILE ILE A . n A 1 205 VAL 205 205 205 VAL VAL A . n A 1 206 GLU 206 206 206 GLU GLU A . n A 1 207 ALA 207 207 207 ALA ALA A . n A 1 208 LYS 208 208 208 LYS LYS A . n A 1 209 GLY 209 209 209 GLY GLY A . n A 1 210 GLU 210 210 210 GLU GLU A . n A 1 211 ILE 211 211 211 ILE ILE A . n A 1 212 LEU 212 212 212 LEU LEU A . n A 1 213 GLU 213 213 213 GLU GLU A . n A 1 214 GLY 214 214 214 GLY GLY A . n A 1 215 LEU 215 215 215 LEU LEU A . n A 1 216 ALA 216 216 216 ALA ALA A . n A 1 217 ALA 217 217 217 ALA ALA A . n A 1 218 ASP 218 218 218 ASP ASP A . n A 1 219 GLY 219 219 219 GLY GLY A . n A 1 220 THR 220 220 220 THR THR A . n A 1 221 ALA 221 221 221 ALA ALA A . n A 1 222 VAL 222 222 222 VAL VAL A . n A 1 223 LEU 223 223 223 LEU LEU A . n A 1 224 ASN 224 224 224 ASN ASN A . n A 1 225 LEU 225 225 225 LEU LEU A . n A 1 226 ASP 226 226 226 ASP ASP A . n A 1 227 ASP 227 227 227 ASP ASP A . n A 1 228 LYS 228 228 228 LYS LYS A . n A 1 229 ALA 229 229 229 ALA ALA A . n A 1 230 PHE 230 230 230 PHE PHE A . n A 1 231 ASP 231 231 231 ASP ASP A . n A 1 232 THR 232 232 232 THR THR A . n A 1 233 TRP 233 233 233 TRP TRP A . n A 1 234 LYS 234 234 234 LYS LYS A . n A 1 235 ALA 235 235 235 ALA ALA A . n A 1 236 ARG 236 236 236 ARG ARG A . n A 1 237 ALA 237 237 237 ALA ALA A . n A 1 238 SER 238 238 238 SER SER A . n A 1 239 GLY 239 239 239 GLY GLY A . n A 1 240 ARG 240 240 240 ARG ARG A . n A 1 241 PRO 241 241 241 PRO PRO A . n A 1 242 LEU 242 242 242 LEU LEU A . n A 1 243 LEU 243 243 243 LEU LEU A . n A 1 244 THR 244 244 244 THR THR A . n A 1 245 PHE 245 245 245 PHE PHE A . n A 1 246 SER 246 246 246 SER SER A . n A 1 247 LEU 247 247 247 LEU LEU A . n A 1 248 ASP 248 248 248 ASP ASP A . n A 1 249 ARG 249 249 249 ARG ARG A . n A 1 250 PRO 250 250 250 PRO PRO A . n A 1 251 GLN 251 251 251 GLN GLN A . n A 1 252 ALA 252 252 252 ALA ALA A . n A 1 253 ASP 253 253 253 ASP ASP A . n A 1 254 PHE 254 254 254 PHE PHE A . n A 1 255 ARG 255 255 255 ARG ARG A . n A 1 256 ALA 256 256 256 ALA ALA A . n A 1 257 ALA 257 257 257 ALA ALA A . n A 1 258 ASP 258 258 258 ASP ASP A . n A 1 259 LEU 259 259 259 LEU LEU A . n A 1 260 GLN 260 260 260 GLN GLN A . n A 1 261 ARG 261 261 261 ARG ARG A . n A 1 262 ASP 262 262 262 ASP ASP A . n A 1 263 ALA 263 263 263 ALA ALA A . n A 1 264 ARG 264 264 264 ARG ARG A . n A 1 265 GLY 265 265 265 GLY GLY A . n A 1 266 CYS 266 266 266 CYS CYS A . n A 1 267 MET 267 267 267 MET MET A . n A 1 268 GLY 268 268 268 GLY GLY A . n A 1 269 PHE 269 269 269 PHE PHE A . n A 1 270 ARG 270 270 270 ARG ARG A . n A 1 271 LEU 271 271 271 LEU LEU A . n A 1 272 GLN 272 272 272 GLN GLN A . n A 1 273 GLY 273 273 273 GLY GLY A . n A 1 274 VAL 274 274 274 VAL VAL A . n A 1 275 ALA 275 275 275 ALA ALA A . n A 1 276 GLY 276 276 276 GLY GLY A . n A 1 277 GLU 277 277 277 GLU GLU A . n A 1 278 ALA 278 278 278 ALA ALA A . n A 1 279 GLN 279 279 279 GLN GLN A . n A 1 280 VAL 280 280 280 VAL VAL A . n A 1 281 GLN 281 281 281 GLN GLN A . n A 1 282 LEU 282 282 282 LEU LEU A . n A 1 283 ASN 283 283 283 ASN ASN A . n A 1 284 LEU 284 284 284 LEU LEU A . n A 1 285 LEU 285 285 285 LEU LEU A . n A 1 286 GLY 286 286 286 GLY GLY A . n A 1 287 ARG 287 287 287 ARG ARG A . n A 1 288 HIS 288 288 288 HIS HIS A . n A 1 289 ASN 289 289 289 ASN ASN A . n A 1 290 VAL 290 290 290 VAL VAL A . n A 1 291 ALA 291 291 291 ALA ALA A . n A 1 292 ASN 292 292 292 ASN ASN A . n A 1 293 ALA 293 293 293 ALA ALA A . n A 1 294 LEU 294 294 294 LEU LEU A . n A 1 295 ALA 295 295 295 ALA ALA A . n A 1 296 ALA 296 296 296 ALA ALA A . n A 1 297 ALA 297 297 297 ALA ALA A . n A 1 298 ALA 298 298 298 ALA ALA A . n A 1 299 ALA 299 299 299 ALA ALA A . n A 1 300 ALA 300 300 300 ALA ALA A . n A 1 301 HIS 301 301 301 HIS HIS A . n A 1 302 ALA 302 302 302 ALA ALA A . n A 1 303 LEU 303 303 303 LEU LEU A . n A 1 304 GLY 304 304 304 GLY GLY A . n A 1 305 VAL 305 305 305 VAL VAL A . n A 1 306 PRO 306 306 306 PRO PRO A . n A 1 307 LEU 307 307 307 LEU LEU A . n A 1 308 ASP 308 308 308 ASP ASP A . n A 1 309 GLY 309 309 309 GLY GLY A . n A 1 310 ILE 310 310 310 ILE ILE A . n A 1 311 VAL 311 311 311 VAL VAL A . n A 1 312 ALA 312 312 312 ALA ALA A . n A 1 313 GLY 313 313 313 GLY GLY A . n A 1 314 LEU 314 314 314 LEU LEU A . n A 1 315 GLN 315 315 315 GLN GLN A . n A 1 316 ALA 316 316 316 ALA ALA A . n A 1 317 LEU 317 317 317 LEU LEU A . n A 1 318 GLN 318 318 318 GLN GLN A . n A 1 319 PRO 319 319 319 PRO PRO A . n A 1 320 VAL 320 320 320 VAL VAL A . n A 1 321 LYS 321 321 321 LYS LYS A . n A 1 322 GLY 322 322 322 GLY GLY A . n A 1 323 ARG 323 323 323 ARG ARG A . n A 1 324 ALA 324 324 324 ALA ALA A . n A 1 325 VAL 325 325 325 VAL VAL A . n A 1 326 ALA 326 326 326 ALA ALA A . n A 1 327 GLN 327 327 327 GLN GLN A . n A 1 328 LEU 328 328 328 LEU LEU A . n A 1 329 THR 329 329 329 THR THR A . n A 1 330 ALA 330 330 330 ALA ALA A . n A 1 331 SER 331 331 331 SER SER A . n A 1 332 GLY 332 332 332 GLY GLY A . n A 1 333 LEU 333 333 333 LEU LEU A . n A 1 334 ARG 334 334 334 ARG ARG A . n A 1 335 VAL 335 335 335 VAL VAL A . n A 1 336 ILE 336 336 336 ILE ILE A . n A 1 337 ASP 337 337 337 ASP ASP A . n A 1 338 ASP 338 338 338 ASP ASP A . n A 1 339 SER 339 339 339 SER SER A . n A 1 340 TYR 340 340 340 TYR TYR A . n A 1 341 ASN 341 341 341 ASN ASN A . n A 1 342 ALA 342 342 342 ALA ALA A . n A 1 343 ASN 343 343 343 ASN ASN A . n A 1 344 PRO 344 344 344 PRO PRO A . n A 1 345 ALA 345 345 345 ALA ALA A . n A 1 346 SER 346 346 346 SER SER A . n A 1 347 MET 347 347 347 MET MET A . n A 1 348 LEU 348 348 348 LEU LEU A . n A 1 349 ALA 349 349 349 ALA ALA A . n A 1 350 ALA 350 350 350 ALA ALA A . n A 1 351 ILE 351 351 351 ILE ILE A . n A 1 352 ASP 352 352 352 ASP ASP A . n A 1 353 ILE 353 353 353 ILE ILE A . n A 1 354 LEU 354 354 354 LEU LEU A . n A 1 355 SER 355 355 355 SER SER A . n A 1 356 GLY 356 356 356 GLY GLY A . n A 1 357 PHE 357 357 357 PHE PHE A . n A 1 358 SER 358 358 358 SER SER A . n A 1 359 GLY 359 359 359 GLY GLY A . n A 1 360 ARG 360 360 360 ARG ARG A . n A 1 361 THR 361 361 361 THR THR A . n A 1 362 VAL 362 362 362 VAL VAL A . n A 1 363 LEU 363 363 363 LEU LEU A . n A 1 364 VAL 364 364 364 VAL VAL A . n A 1 365 LEU 365 365 365 LEU LEU A . n A 1 366 GLY 366 366 366 GLY GLY A . n A 1 367 ASP 367 367 367 ASP ASP A . n A 1 368 MET 368 368 368 MET MET A . n A 1 369 GLY 369 369 369 GLY GLY A . n A 1 370 GLU 370 370 ? ? ? A . n A 1 371 LEU 371 371 ? ? ? A . n A 1 372 GLY 372 372 ? ? ? A . n A 1 373 SER 373 373 ? ? ? A . n A 1 374 TRP 374 374 ? ? ? A . n A 1 375 ALA 375 375 375 ALA ALA A . n A 1 376 GLU 376 376 376 GLU GLU A . n A 1 377 GLN 377 377 377 GLN GLN A . n A 1 378 ALA 378 378 378 ALA ALA A . n A 1 379 HIS 379 379 379 HIS HIS A . n A 1 380 ARG 380 380 380 ARG ARG A . n A 1 381 GLU 381 381 381 GLU GLU A . n A 1 382 VAL 382 382 382 VAL VAL A . n A 1 383 GLY 383 383 383 GLY GLY A . n A 1 384 ALA 384 384 384 ALA ALA A . n A 1 385 TYR 385 385 385 TYR TYR A . n A 1 386 ALA 386 386 386 ALA ALA A . n A 1 387 ALA 387 387 387 ALA ALA A . n A 1 388 GLY 388 388 388 GLY GLY A . n A 1 389 LYS 389 389 389 LYS LYS A . n A 1 390 VAL 390 390 390 VAL VAL A . n A 1 391 SER 391 391 391 SER SER A . n A 1 392 ALA 392 392 392 ALA ALA A . n A 1 393 LEU 393 393 393 LEU LEU A . n A 1 394 TYR 394 394 394 TYR TYR A . n A 1 395 ALA 395 395 395 ALA ALA A . n A 1 396 VAL 396 396 396 VAL VAL A . n A 1 397 GLY 397 397 397 GLY GLY A . n A 1 398 PRO 398 398 398 PRO PRO A . n A 1 399 LEU 399 399 399 LEU LEU A . n A 1 400 MET 400 400 400 MET MET A . n A 1 401 ALA 401 401 401 ALA ALA A . n A 1 402 HIS 402 402 402 HIS HIS A . n A 1 403 ALA 403 403 403 ALA ALA A . n A 1 404 VAL 404 404 404 VAL VAL A . n A 1 405 GLN 405 405 405 GLN GLN A . n A 1 406 ALA 406 406 406 ALA ALA A . n A 1 407 PHE 407 407 407 PHE PHE A . n A 1 408 GLY 408 408 408 GLY GLY A . n A 1 409 ALA 409 409 409 ALA ALA A . n A 1 410 THR 410 410 410 THR THR A . n A 1 411 GLY 411 411 411 GLY GLY A . n A 1 412 ARG 412 412 412 ARG ARG A . n A 1 413 HIS 413 413 413 HIS HIS A . n A 1 414 PHE 414 414 414 PHE PHE A . n A 1 415 ALA 415 415 415 ALA ALA A . n A 1 416 ASP 416 416 416 ASP ASP A . n A 1 417 GLN 417 417 417 GLN GLN A . n A 1 418 ALA 418 418 418 ALA ALA A . n A 1 419 SER 419 419 419 SER SER A . n A 1 420 LEU 420 420 420 LEU LEU A . n A 1 421 ILE 421 421 421 ILE ILE A . n A 1 422 GLY 422 422 422 GLY GLY A . n A 1 423 ALA 423 423 423 ALA ALA A . n A 1 424 LEU 424 424 424 LEU LEU A . n A 1 425 ALA 425 425 425 ALA ALA A . n A 1 426 THR 426 426 426 THR THR A . n A 1 427 GLU 427 427 427 GLU GLU A . n A 1 428 ASP 428 428 428 ASP ASP A . n A 1 429 PRO 429 429 429 PRO PRO A . n A 1 430 THR 430 430 430 THR THR A . n A 1 431 THR 431 431 431 THR THR A . n A 1 432 THR 432 432 432 THR THR A . n A 1 433 ILE 433 433 433 ILE ILE A . n A 1 434 LEU 434 434 434 LEU LEU A . n A 1 435 ILE 435 435 435 ILE ILE A . n A 1 436 LYS 436 436 436 LYS LYS A . n A 1 437 GLY 437 437 437 GLY GLY A . n A 1 438 SER 438 438 438 SER SER A . n A 1 439 ARG 439 439 439 ARG ARG A . n A 1 440 SER 440 440 440 SER SER A . n A 1 441 ALA 441 441 441 ALA ALA A . n A 1 442 ALA 442 442 442 ALA ALA A . n A 1 443 MET 443 443 443 MET MET A . n A 1 444 ASP 444 444 444 ASP ASP A . n A 1 445 LYS 445 445 445 LYS LYS A . n A 1 446 VAL 446 446 446 VAL VAL A . n A 1 447 VAL 447 447 447 VAL VAL A . n A 1 448 ALA 448 448 448 ALA ALA A . n A 1 449 ALA 449 449 449 ALA ALA A . n A 1 450 LEU 450 450 450 LEU LEU A . n A 1 451 CYS 451 451 451 CYS CYS A . n A 1 452 GLY 452 452 ? ? ? A . n A 1 453 SER 453 453 ? ? ? A . n A 1 454 SER 454 454 ? ? ? A . n A 1 455 GLU 455 455 ? ? ? A . n A 1 456 GLU 456 456 ? ? ? A . n A 1 457 SER 457 457 ? ? ? A . n A 1 458 HIS 458 458 ? ? ? A . n A 1 459 SER 459 459 ? ? ? A . n A 1 460 SER 460 460 ? ? ? A . n A 1 461 VAL 461 461 ? ? ? A . n A 1 462 ASP 462 462 ? ? ? A . n A 1 463 LYS 463 463 ? ? ? A . n A 1 464 LEU 464 464 ? ? ? A . n A 1 465 ALA 465 465 ? ? ? A . n A 1 466 ALA 466 466 ? ? ? A . n A 1 467 ALA 467 467 ? ? ? A . n A 1 468 LEU 468 468 ? ? ? A . n A 1 469 GLU 469 469 ? ? ? A . n A 1 470 HIS 470 470 ? ? ? A . n A 1 471 HIS 471 471 ? ? ? A . n A 1 472 HIS 472 472 ? ? ? A . n A 1 473 HIS 473 473 ? ? ? A . n A 1 474 HIS 474 474 ? ? ? A . n A 1 475 HIS 475 475 ? ? ? A . n B 2 1 ALA 1 1454 1454 ALA ALA B . n B 2 2 FGA 2 1455 1455 FGA FGA B . n B 2 3 API 3 1456 1456 API API B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 UDP 1 1452 1452 UDP UDP A . D 4 MUB 1 1453 1453 MUB MUB A . E 5 HOH 1 2001 2001 HOH HOH A . E 5 HOH 2 2002 2002 HOH HOH A . E 5 HOH 3 2003 2003 HOH HOH A . E 5 HOH 4 2004 2004 HOH HOH A . E 5 HOH 5 2005 2005 HOH HOH A . E 5 HOH 6 2006 2006 HOH HOH A . E 5 HOH 7 2007 2007 HOH HOH A . E 5 HOH 8 2008 2008 HOH HOH A . E 5 HOH 9 2009 2009 HOH HOH A . E 5 HOH 10 2010 2010 HOH HOH A . E 5 HOH 11 2011 2011 HOH HOH A . E 5 HOH 12 2012 2012 HOH HOH A . E 5 HOH 13 2013 2013 HOH HOH A . E 5 HOH 14 2014 2014 HOH HOH A . E 5 HOH 15 2015 2015 HOH HOH A . E 5 HOH 16 2016 2016 HOH HOH A . E 5 HOH 17 2017 2017 HOH HOH A . E 5 HOH 18 2018 2018 HOH HOH A . E 5 HOH 19 2019 2019 HOH HOH A . E 5 HOH 20 2020 2020 HOH HOH A . E 5 HOH 21 2021 2021 HOH HOH A . E 5 HOH 22 2022 2022 HOH HOH A . E 5 HOH 23 2023 2023 HOH HOH A . E 5 HOH 24 2024 2024 HOH HOH A . E 5 HOH 25 2025 2025 HOH HOH A . E 5 HOH 26 2026 2026 HOH HOH A . E 5 HOH 27 2027 2027 HOH HOH A . E 5 HOH 28 2028 2028 HOH HOH A . E 5 HOH 29 2029 2029 HOH HOH A . E 5 HOH 30 2030 2030 HOH HOH A . E 5 HOH 31 2031 2031 HOH HOH A . E 5 HOH 32 2032 2032 HOH HOH A . E 5 HOH 33 2033 2033 HOH HOH A . E 5 HOH 34 2034 2034 HOH HOH A . E 5 HOH 35 2035 2035 HOH HOH A . E 5 HOH 36 2036 2036 HOH HOH A . E 5 HOH 37 2037 2037 HOH HOH A . E 5 HOH 38 2038 2038 HOH HOH A . E 5 HOH 39 2039 2039 HOH HOH A . E 5 HOH 40 2040 2040 HOH HOH A . E 5 HOH 41 2041 2041 HOH HOH A . E 5 HOH 42 2042 2042 HOH HOH A . E 5 HOH 43 2043 2043 HOH HOH A . E 5 HOH 44 2044 2044 HOH HOH A . E 5 HOH 45 2045 2045 HOH HOH A . E 5 HOH 46 2046 2046 HOH HOH A . E 5 HOH 47 2047 2047 HOH HOH A . E 5 HOH 48 2048 2048 HOH HOH A . E 5 HOH 49 2049 2049 HOH HOH A . E 5 HOH 50 2050 2050 HOH HOH A . E 5 HOH 51 2051 2051 HOH HOH A . E 5 HOH 52 2052 2052 HOH HOH A . E 5 HOH 53 2053 2053 HOH HOH A . E 5 HOH 54 2054 2054 HOH HOH A . E 5 HOH 55 2055 2055 HOH HOH A . E 5 HOH 56 2056 2056 HOH HOH A . E 5 HOH 57 2057 2057 HOH HOH A . E 5 HOH 58 2058 2058 HOH HOH A . E 5 HOH 59 2059 2059 HOH HOH A . E 5 HOH 60 2060 2060 HOH HOH A . E 5 HOH 61 2061 2061 HOH HOH A . E 5 HOH 62 2062 2062 HOH HOH A . E 5 HOH 63 2063 2063 HOH HOH A . E 5 HOH 64 2064 2064 HOH HOH A . E 5 HOH 65 2065 2065 HOH HOH A . E 5 HOH 66 2066 2066 HOH HOH A . E 5 HOH 67 2067 2067 HOH HOH A . E 5 HOH 68 2068 2068 HOH HOH A . E 5 HOH 69 2069 2069 HOH HOH A . E 5 HOH 70 2070 2070 HOH HOH A . E 5 HOH 71 2071 2071 HOH HOH A . E 5 HOH 72 2072 2072 HOH HOH A . E 5 HOH 73 2073 2073 HOH HOH A . E 5 HOH 74 2074 2074 HOH HOH A . E 5 HOH 75 2075 2075 HOH HOH A . E 5 HOH 76 2076 2076 HOH HOH A . E 5 HOH 77 2077 2077 HOH HOH A . E 5 HOH 78 2078 2078 HOH HOH A . E 5 HOH 79 2079 2079 HOH HOH A . E 5 HOH 80 2080 2080 HOH HOH A . E 5 HOH 81 2081 2081 HOH HOH A . E 5 HOH 82 2082 2082 HOH HOH A . E 5 HOH 83 2083 2083 HOH HOH A . E 5 HOH 84 2084 2084 HOH HOH A . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ARG 48 ? CG ? A ARG 48 CG 2 1 Y 1 A ARG 48 ? CD ? A ARG 48 CD 3 1 Y 1 A ARG 48 ? NE ? A ARG 48 NE 4 1 Y 1 A ARG 48 ? CZ ? A ARG 48 CZ 5 1 Y 1 A ARG 48 ? NH1 ? A ARG 48 NH1 6 1 Y 1 A ARG 48 ? NH2 ? A ARG 48 NH2 7 1 Y 1 A ARG 83 ? CD ? A ARG 83 CD 8 1 Y 1 A ARG 83 ? NE ? A ARG 83 NE 9 1 Y 1 A ARG 83 ? CZ ? A ARG 83 CZ 10 1 Y 1 A ARG 83 ? NH1 ? A ARG 83 NH1 11 1 Y 1 A ARG 83 ? NH2 ? A ARG 83 NH2 12 1 Y 1 A ARG 138 ? CG ? A ARG 138 CG 13 1 Y 1 A ARG 138 ? CD ? A ARG 138 CD 14 1 Y 1 A ARG 138 ? NE ? A ARG 138 NE 15 1 Y 1 A ARG 138 ? CZ ? A ARG 138 CZ 16 1 Y 1 A ARG 138 ? NH1 ? A ARG 138 NH1 17 1 Y 1 A ARG 138 ? NH2 ? A ARG 138 NH2 18 1 Y 1 A LYS 203 ? CG ? A LYS 203 CG 19 1 Y 1 A LYS 203 ? CD ? A LYS 203 CD 20 1 Y 1 A LYS 203 ? CE ? A LYS 203 CE 21 1 Y 1 A LYS 203 ? NZ ? A LYS 203 NZ 22 1 Y 1 A GLN 260 ? CG ? A GLN 260 CG 23 1 Y 1 A GLN 260 ? CD ? A GLN 260 CD 24 1 Y 1 A GLN 260 ? OE1 ? A GLN 260 OE1 25 1 Y 1 A GLN 260 ? NE2 ? A GLN 260 NE2 26 1 Y 1 A ARG 270 ? CG ? A ARG 270 CG 27 1 Y 1 A ARG 270 ? CD ? A ARG 270 CD 28 1 Y 1 A ARG 270 ? NE ? A ARG 270 NE 29 1 Y 1 A ARG 270 ? CZ ? A ARG 270 CZ 30 1 Y 1 A ARG 270 ? NH1 ? A ARG 270 NH1 31 1 Y 1 A ARG 270 ? NH2 ? A ARG 270 NH2 32 1 Y 1 A LYS 321 ? CD ? A LYS 321 CD 33 1 Y 1 A LYS 321 ? CE ? A LYS 321 CE 34 1 Y 1 A LYS 321 ? NZ ? A LYS 321 NZ 35 1 Y 1 A ARG 412 ? CD ? A ARG 412 CD 36 1 Y 1 A ARG 412 ? NE ? A ARG 412 NE 37 1 Y 1 A ARG 412 ? CZ ? A ARG 412 CZ 38 1 Y 1 A ARG 412 ? NH1 ? A ARG 412 NH1 39 1 Y 1 A ARG 412 ? NH2 ? A ARG 412 NH2 40 1 Y 1 A ASP 428 ? CG ? A ASP 428 CG 41 1 Y 1 A ASP 428 ? OD1 ? A ASP 428 OD1 42 1 Y 1 A ASP 428 ? OD2 ? A ASP 428 OD2 43 1 Y 1 A ARG 439 ? CG ? A ARG 439 CG 44 1 Y 1 A ARG 439 ? CD ? A ARG 439 CD 45 1 Y 1 A ARG 439 ? NE ? A ARG 439 NE 46 1 Y 1 A ARG 439 ? CZ ? A ARG 439 CZ 47 1 Y 1 A ARG 439 ? NH1 ? A ARG 439 NH1 48 1 Y 1 A ARG 439 ? NH2 ? A ARG 439 NH2 49 1 Y 1 A LYS 445 ? CD ? A LYS 445 CD 50 1 Y 1 A LYS 445 ? CE ? A LYS 445 CE 51 1 Y 1 A LYS 445 ? NZ ? A LYS 445 NZ # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.8.0049 ? 1 xia2 'data reduction' . ? 2 xia2 'data scaling' . ? 3 PHASER phasing . ? 4 # _cell.entry_id 4CVK _cell.length_a 57.810 _cell.length_b 87.290 _cell.length_c 92.610 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4CVK _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 # _exptl.entry_id 4CVK _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.5 _exptl_crystal.density_percent_sol 50 _exptl_crystal.description NONE # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '0.2 M MG FORMATE, 20 % PEG3350' # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector PIXEL _diffrn_detector.type 'DECTRIS PILATUS 6M' _diffrn_detector.pdbx_collection_date ? _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.92 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'DIAMOND BEAMLINE I04-1' _diffrn_source.pdbx_synchrotron_site Diamond _diffrn_source.pdbx_synchrotron_beamline I04-1 _diffrn_source.pdbx_wavelength 0.92 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 4CVK _reflns.observed_criterion_sigma_I 2.4 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 49.04 _reflns.d_resolution_high 1.92 _reflns.number_obs 36216 _reflns.number_all ? _reflns.percent_possible_obs 99.3 _reflns.pdbx_Rmerge_I_obs 0.09 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 13.20 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 4.7 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 1.92 _reflns_shell.d_res_low 1.97 _reflns_shell.percent_possible_all 99.8 _reflns_shell.Rmerge_I_obs 0.59 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 2.40 _reflns_shell.pdbx_redundancy 4.5 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 4CVK _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 34360 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F . _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 49.04 _refine.ls_d_res_high 1.92 _refine.ls_percent_reflns_obs 99.04 _refine.ls_R_factor_obs 0.19717 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.19568 _refine.ls_R_factor_R_free 0.22562 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.0 _refine.ls_number_reflns_R_free 1804 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.944 _refine.correlation_coeff_Fo_to_Fc_free 0.932 _refine.B_iso_mean 23.304 _refine.aniso_B[1][1] -0.99 _refine.aniso_B[2][2] 1.47 _refine.aniso_B[3][3] -0.48 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. U VALUES REFINED INDIVIDUALLY' _refine.pdbx_starting_model 'PDB ENTRY 1GG4' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.151 _refine.pdbx_overall_ESU_R_Free 0.137 _refine.overall_SU_ML 0.106 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 3.766 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 3136 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 70 _refine_hist.number_atoms_solvent 84 _refine_hist.number_atoms_total 3290 _refine_hist.d_res_high 1.92 _refine_hist.d_res_low 49.04 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.012 0.019 ? 3255 'X-RAY DIFFRACTION' ? r_bond_other_d 0.002 0.020 ? 3192 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.558 1.999 ? 4431 'X-RAY DIFFRACTION' ? r_angle_other_deg 0.864 3.007 ? 7293 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 6.030 5.000 ? 436 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 30.346 23.846 ? 117 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 12.920 15.000 ? 491 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 14.669 15.000 ? 23 'X-RAY DIFFRACTION' ? r_chiral_restr 0.093 0.200 ? 542 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.007 0.021 ? 3731 'X-RAY DIFFRACTION' ? r_gen_planes_other 0.001 0.020 ? 688 'X-RAY DIFFRACTION' ? r_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1.530 2.249 ? 1756 'X-RAY DIFFRACTION' ? r_mcbond_other 1.529 2.249 ? 1756 'X-RAY DIFFRACTION' ? r_mcangle_it 2.262 3.357 ? 2188 'X-RAY DIFFRACTION' ? r_mcangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scbond_it 2.164 2.468 ? 1499 'X-RAY DIFFRACTION' ? r_scbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.920 _refine_ls_shell.d_res_low 1.970 _refine_ls_shell.number_reflns_R_work 2485 _refine_ls_shell.R_factor_R_work 0.260 _refine_ls_shell.percent_reflns_obs 99.62 _refine_ls_shell.R_factor_R_free 0.311 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 159 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # _database_PDB_matrix.entry_id 4CVK _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 4CVK _struct.title 'PaMurF in complex with UDP-MurNAc-tripeptide (mDAP)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4CVK _struct_keywords.pdbx_keywords LIGASE _struct_keywords.text 'LIGASE, MURF, TRIPEPTIDE' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP Q9HVZ7_PSEAE Q9HVZ7 ? 1 ;MLEPLRLSQLTVALDARLIGEDAVFSAVSTDSRAIGPGQLFIALSGPRFDGHDYLAEVAAKGAVAALVEREVADAPLPQL LVRDTRAALGRLGALNRRKFTGPLAAMTGSSGKTTVKEMLASILRTQAGDAESVLATRGNLNNDLGVPLTLLQLAPQHRS AVIELGASRIGEIAYTVELTRPHVAIITNAGTAHVGEFGGPEKIVEAKGEILEGLAADGTAVLNLDDKAFDTWKARASGR PLLTFSLDRPQADFRAADLQRDARGCMGFRLQGVAGEAQVQLNLLGRHNVANALAAAAAAHALGVPLDGIVAGLQALQPV KGRAVAQLTASGLRVIDDSYNANPASMLAAIDILSGFSGRTVLVLGDMGELGSWAEQAHREVGAYAAGKVSALYAVGPLM AHAVQAFGATGRHFADQASLIGALATEQPTTTILIKGSRSAAMDKVVAALCGSSEESH ; 1 2 PDB 4CVK 4CVK ? 2 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4CVK A 1 ? 458 ? Q9HVZ7 1 ? 458 ? 1 458 2 2 4CVK B 1 ? 3 ? 4CVK 1454 ? 1456 ? 1454 1456 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4CVK GLU A 39 ? UNP Q9HVZ7 GLN 39 conflict 39 1 1 4CVK ASP A 428 ? UNP Q9HVZ7 GLN 428 conflict 428 2 1 4CVK SER A 459 ? UNP Q9HVZ7 ? ? 'expression tag' 459 3 1 4CVK SER A 460 ? UNP Q9HVZ7 ? ? 'expression tag' 460 4 1 4CVK VAL A 461 ? UNP Q9HVZ7 ? ? 'expression tag' 461 5 1 4CVK ASP A 462 ? UNP Q9HVZ7 ? ? 'expression tag' 462 6 1 4CVK LYS A 463 ? UNP Q9HVZ7 ? ? 'expression tag' 463 7 1 4CVK LEU A 464 ? UNP Q9HVZ7 ? ? 'expression tag' 464 8 1 4CVK ALA A 465 ? UNP Q9HVZ7 ? ? 'expression tag' 465 9 1 4CVK ALA A 466 ? UNP Q9HVZ7 ? ? 'expression tag' 466 10 1 4CVK ALA A 467 ? UNP Q9HVZ7 ? ? 'expression tag' 467 11 1 4CVK LEU A 468 ? UNP Q9HVZ7 ? ? 'expression tag' 468 12 1 4CVK GLU A 469 ? UNP Q9HVZ7 ? ? 'expression tag' 469 13 1 4CVK HIS A 470 ? UNP Q9HVZ7 ? ? 'expression tag' 470 14 1 4CVK HIS A 471 ? UNP Q9HVZ7 ? ? 'expression tag' 471 15 1 4CVK HIS A 472 ? UNP Q9HVZ7 ? ? 'expression tag' 472 16 1 4CVK HIS A 473 ? UNP Q9HVZ7 ? ? 'expression tag' 473 17 1 4CVK HIS A 474 ? UNP Q9HVZ7 ? ? 'expression tag' 474 18 1 4CVK HIS A 475 ? UNP Q9HVZ7 ? ? 'expression tag' 475 19 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 1960 ? 1 MORE 6 ? 1 'SSA (A^2)' 17770 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 LEU A 10 ? ASP A 15 ? LEU A 10 ASP A 15 1 ? 6 HELX_P HELX_P2 2 GLY A 51 ? ASP A 53 ? GLY A 51 ASP A 53 5 ? 3 HELX_P HELX_P3 3 TYR A 54 ? LYS A 61 ? TYR A 54 LYS A 61 1 ? 8 HELX_P HELX_P4 4 ASP A 84 ? PHE A 100 ? ASP A 84 PHE A 100 1 ? 17 HELX_P HELX_P5 5 SER A 111 ? GLY A 129 ? SER A 111 GLY A 129 1 ? 19 HELX_P HELX_P6 6 ASP A 130 ? GLU A 132 ? ASP A 130 GLU A 132 5 ? 3 HELX_P HELX_P7 7 LEU A 145 ? GLN A 153 ? LEU A 145 GLN A 153 1 ? 9 HELX_P HELX_P8 8 GLY A 171 ? ARG A 181 ? GLY A 171 ARG A 181 1 ? 11 HELX_P HELX_P9 9 GLY A 200 ? GLU A 210 ? GLY A 200 GLU A 210 1 ? 11 HELX_P HELX_P10 10 ILE A 211 ? LEU A 215 ? ILE A 211 LEU A 215 5 ? 5 HELX_P HELX_P11 11 ALA A 229 ? ALA A 237 ? ALA A 229 ALA A 237 1 ? 9 HELX_P HELX_P12 12 GLY A 286 ? LEU A 303 ? GLY A 286 LEU A 303 1 ? 18 HELX_P HELX_P13 13 PRO A 306 ? LEU A 317 ? PRO A 306 LEU A 317 1 ? 12 HELX_P HELX_P14 14 ASN A 343 ? GLY A 356 ? ASN A 343 GLY A 356 1 ? 14 HELX_P HELX_P15 15 ALA A 375 ? ALA A 387 ? ALA A 375 ALA A 387 1 ? 13 HELX_P HELX_P16 16 LEU A 399 ? GLY A 408 ? LEU A 399 GLY A 408 1 ? 10 HELX_P HELX_P17 17 ASP A 416 ? ALA A 425 ? ASP A 416 ALA A 425 1 ? 10 HELX_P HELX_P18 18 SER A 438 ? ALA A 442 ? SER A 438 ALA A 442 5 ? 5 HELX_P HELX_P19 19 MET A 443 ? CYS A 451 ? MET A 443 CYS A 451 1 ? 9 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? C UDP . PB ? ? ? 1_555 D MUB . O1 ? ? A UDP 1452 A MUB 1453 1_555 ? ? ? ? ? ? ? 1.618 ? ? covale2 covale one ? D MUB . C10 ? ? ? 1_555 B ALA 1 N ? ? A MUB 1453 B ALA 1454 1_555 ? ? ? ? ? ? ? 1.324 ? ? covale3 covale both ? B ALA 1 C ? ? ? 1_555 B FGA 2 N ? ? B ALA 1454 B FGA 1455 1_555 ? ? ? ? ? ? ? 1.365 ? ? covale4 covale both ? B FGA 2 CD ? ? ? 1_555 B API 3 N ? ? B FGA 1455 B API 1456 1_555 ? ? ? ? ? ? ? 1.355 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA ? 2 ? AB ? 5 ? AC ? 9 ? AD ? 6 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA 1 2 ? anti-parallel AB 1 2 ? anti-parallel AB 2 3 ? parallel AB 3 4 ? parallel AB 4 5 ? parallel AC 1 2 ? parallel AC 2 3 ? parallel AC 3 4 ? parallel AC 4 5 ? parallel AC 5 6 ? parallel AC 6 7 ? parallel AC 7 8 ? anti-parallel AC 8 9 ? anti-parallel AD 1 2 ? anti-parallel AD 2 3 ? parallel AD 3 4 ? parallel AD 4 5 ? parallel AD 5 6 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA 1 LEU A 5 ? ARG A 6 ? LEU A 5 ARG A 6 AA 2 VAL A 24 ? PHE A 25 ? VAL A 24 PHE A 25 AB 1 ARG A 17 ? ILE A 19 ? ARG A 17 ILE A 19 AB 2 GLN A 79 ? LEU A 81 ? GLN A 79 LEU A 81 AB 3 ALA A 65 ? VAL A 68 ? ALA A 65 VAL A 68 AB 4 GLU A 39 ? ILE A 42 ? GLU A 39 ILE A 42 AB 5 ALA A 27 ? SER A 29 ? ALA A 27 SER A 29 AC 1 VAL A 134 ? ALA A 136 ? VAL A 134 ALA A 136 AC 2 SER A 160 ? GLU A 164 ? SER A 160 GLU A 164 AC 3 LEU A 104 ? THR A 108 ? LEU A 104 THR A 108 AC 4 VAL A 184 ? ILE A 187 ? VAL A 184 ILE A 187 AC 5 THR A 220 ? ASN A 224 ? THR A 220 ASN A 224 AC 6 LEU A 242 ? SER A 246 ? LEU A 242 SER A 246 AC 7 PHE A 254 ? ARG A 261 ? PHE A 254 ARG A 261 AC 8 MET A 267 ? GLY A 273 ? MET A 267 GLY A 273 AC 9 ALA A 278 ? GLN A 281 ? ALA A 278 GLN A 281 AD 1 VAL A 325 ? LEU A 328 ? VAL A 325 LEU A 328 AD 2 ARG A 334 ? ASP A 338 ? ARG A 334 ASP A 338 AD 3 THR A 432 ? LYS A 436 ? THR A 432 LYS A 436 AD 4 THR A 361 ? GLY A 366 ? THR A 361 GLY A 366 AD 5 ALA A 392 ? VAL A 396 ? ALA A 392 VAL A 396 AD 6 ARG A 412 ? PHE A 414 ? ARG A 412 PHE A 414 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA 1 2 N LEU A 5 ? N LEU A 5 O PHE A 25 ? O PHE A 25 AB 1 2 N ILE A 19 ? N ILE A 19 O GLN A 79 ? O GLN A 79 AB 2 3 N LEU A 80 ? N LEU A 80 O ALA A 66 ? O ALA A 66 AB 3 4 N LEU A 67 ? N LEU A 67 O PHE A 41 ? O PHE A 41 AB 4 5 N LEU A 40 ? N LEU A 40 O ALA A 27 ? O ALA A 27 AC 1 2 N LEU A 135 ? N LEU A 135 O SER A 160 ? O SER A 160 AC 2 3 N ILE A 163 ? N ILE A 163 O ALA A 105 ? O ALA A 105 AC 3 4 N ALA A 106 ? N ALA A 106 O VAL A 184 ? O VAL A 184 AC 4 5 N ALA A 185 ? N ALA A 185 O THR A 220 ? O THR A 220 AC 5 6 N LEU A 223 ? N LEU A 223 O LEU A 243 ? O LEU A 243 AC 6 7 N SER A 246 ? N SER A 246 O PHE A 254 ? O PHE A 254 AC 7 8 N GLN A 260 ? N GLN A 260 O GLY A 268 ? O GLY A 268 AC 8 9 N LEU A 271 ? N LEU A 271 O ALA A 278 ? O ALA A 278 AD 1 2 N GLN A 327 ? N GLN A 327 O VAL A 335 ? O VAL A 335 AD 2 3 N ILE A 336 ? N ILE A 336 O ILE A 433 ? O ILE A 433 AD 3 4 N LEU A 434 ? N LEU A 434 O VAL A 362 ? O VAL A 362 AD 4 5 N LEU A 363 ? N LEU A 363 O ALA A 392 ? O ALA A 392 AD 5 6 N ALA A 395 ? N ALA A 395 O ARG A 412 ? O ARG A 412 # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 C _pdbx_validate_rmsd_bond.auth_asym_id_1 A _pdbx_validate_rmsd_bond.auth_comp_id_1 THR _pdbx_validate_rmsd_bond.auth_seq_id_1 114 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 N _pdbx_validate_rmsd_bond.auth_asym_id_2 A _pdbx_validate_rmsd_bond.auth_comp_id_2 THR _pdbx_validate_rmsd_bond.auth_seq_id_2 115 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.196 _pdbx_validate_rmsd_bond.bond_target_value 1.336 _pdbx_validate_rmsd_bond.bond_deviation -0.140 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.023 _pdbx_validate_rmsd_bond.linker_flag Y # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 CA _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 LEU _pdbx_validate_rmsd_angle.auth_seq_id_1 2 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 CB _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 LEU _pdbx_validate_rmsd_angle.auth_seq_id_2 2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 CG _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 LEU _pdbx_validate_rmsd_angle.auth_seq_id_3 2 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 98.72 _pdbx_validate_rmsd_angle.angle_target_value 115.30 _pdbx_validate_rmsd_angle.angle_deviation -16.58 _pdbx_validate_rmsd_angle.angle_standard_deviation 2.30 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ALA A 34 ? ? -150.04 71.75 2 1 SER A 110 ? ? -72.37 -163.51 3 1 ASN A 143 ? ? -101.97 -168.49 4 1 ASN A 189 ? ? 176.26 167.72 5 1 ALA A 342 ? ? -172.56 143.76 6 1 THR A 430 ? ? 84.88 -13.15 # _pdbx_validate_polymer_linkage.id 1 _pdbx_validate_polymer_linkage.PDB_model_num 1 _pdbx_validate_polymer_linkage.auth_atom_id_1 C _pdbx_validate_polymer_linkage.auth_asym_id_1 A _pdbx_validate_polymer_linkage.auth_comp_id_1 THR _pdbx_validate_polymer_linkage.auth_seq_id_1 114 _pdbx_validate_polymer_linkage.PDB_ins_code_1 ? _pdbx_validate_polymer_linkage.label_alt_id_1 ? _pdbx_validate_polymer_linkage.auth_atom_id_2 N _pdbx_validate_polymer_linkage.auth_asym_id_2 A _pdbx_validate_polymer_linkage.auth_comp_id_2 THR _pdbx_validate_polymer_linkage.auth_seq_id_2 115 _pdbx_validate_polymer_linkage.PDB_ins_code_2 ? _pdbx_validate_polymer_linkage.label_alt_id_2 ? _pdbx_validate_polymer_linkage.dist 1.20 # _pdbx_entry_details.entry_id 4CVK _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details 'CONTAINS A C-TERM HIS TAG' _pdbx_entry_details.has_ligand_of_interest ? # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A ASP 74 ? A ASP 74 2 1 Y 1 A GLY 191 ? A GLY 191 3 1 Y 1 A THR 192 ? A THR 192 4 1 Y 1 A ALA 193 ? A ALA 193 5 1 Y 1 A HIS 194 ? A HIS 194 6 1 Y 1 A VAL 195 ? A VAL 195 7 1 Y 1 A GLY 196 ? A GLY 196 8 1 Y 1 A GLU 197 ? A GLU 197 9 1 Y 1 A GLU 370 ? A GLU 370 10 1 Y 1 A LEU 371 ? A LEU 371 11 1 Y 1 A GLY 372 ? A GLY 372 12 1 Y 1 A SER 373 ? A SER 373 13 1 Y 1 A TRP 374 ? A TRP 374 14 1 Y 1 A GLY 452 ? A GLY 452 15 1 Y 1 A SER 453 ? A SER 453 16 1 Y 1 A SER 454 ? A SER 454 17 1 Y 1 A GLU 455 ? A GLU 455 18 1 Y 1 A GLU 456 ? A GLU 456 19 1 Y 1 A SER 457 ? A SER 457 20 1 Y 1 A HIS 458 ? A HIS 458 21 1 Y 1 A SER 459 ? A SER 459 22 1 Y 1 A SER 460 ? A SER 460 23 1 Y 1 A VAL 461 ? A VAL 461 24 1 Y 1 A ASP 462 ? A ASP 462 25 1 Y 1 A LYS 463 ? A LYS 463 26 1 Y 1 A LEU 464 ? A LEU 464 27 1 Y 1 A ALA 465 ? A ALA 465 28 1 Y 1 A ALA 466 ? A ALA 466 29 1 Y 1 A ALA 467 ? A ALA 467 30 1 Y 1 A LEU 468 ? A LEU 468 31 1 Y 1 A GLU 469 ? A GLU 469 32 1 Y 1 A HIS 470 ? A HIS 470 33 1 Y 1 A HIS 471 ? A HIS 471 34 1 Y 1 A HIS 472 ? A HIS 472 35 1 Y 1 A HIS 473 ? A HIS 473 36 1 Y 1 A HIS 474 ? A HIS 474 37 1 Y 1 A HIS 475 ? A HIS 475 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 API C C N N 14 API CA C N S 15 API C3 C N N 16 API C4 C N N 17 API C5 C N N 18 API C6 C N R 19 API C7 C N N 20 API O O N N 21 API OXT O N N 22 API O3 O N N 23 API O4 O N N 24 API N N N N 25 API N6 N N N 26 API HA H N N 27 API H31 H N N 28 API H32 H N N 29 API H41 H N N 30 API H42 H N N 31 API H51 H N N 32 API H52 H N N 33 API H6 H N N 34 API HXT H N N 35 API HO4 H N N 36 API H H N N 37 API H2 H N N 38 API HN61 H N N 39 API HN62 H N N 40 ARG N N N N 41 ARG CA C N S 42 ARG C C N N 43 ARG O O N N 44 ARG CB C N N 45 ARG CG C N N 46 ARG CD C N N 47 ARG NE N N N 48 ARG CZ C N N 49 ARG NH1 N N N 50 ARG NH2 N N N 51 ARG OXT O N N 52 ARG H H N N 53 ARG H2 H N N 54 ARG HA H N N 55 ARG HB2 H N N 56 ARG HB3 H N N 57 ARG HG2 H N N 58 ARG HG3 H N N 59 ARG HD2 H N N 60 ARG HD3 H N N 61 ARG HE H N N 62 ARG HH11 H N N 63 ARG HH12 H N N 64 ARG HH21 H N N 65 ARG HH22 H N N 66 ARG HXT H N N 67 ASN N N N N 68 ASN CA C N S 69 ASN C C N N 70 ASN O O N N 71 ASN CB C N N 72 ASN CG C N N 73 ASN OD1 O N N 74 ASN ND2 N N N 75 ASN OXT O N N 76 ASN H H N N 77 ASN H2 H N N 78 ASN HA H N N 79 ASN HB2 H N N 80 ASN HB3 H N N 81 ASN HD21 H N N 82 ASN HD22 H N N 83 ASN HXT H N N 84 ASP N N N N 85 ASP CA C N S 86 ASP C C N N 87 ASP O O N N 88 ASP CB C N N 89 ASP CG C N N 90 ASP OD1 O N N 91 ASP OD2 O N N 92 ASP OXT O N N 93 ASP H H N N 94 ASP H2 H N N 95 ASP HA H N N 96 ASP HB2 H N N 97 ASP HB3 H N N 98 ASP HD2 H N N 99 ASP HXT H N N 100 CYS N N N N 101 CYS CA C N R 102 CYS C C N N 103 CYS O O N N 104 CYS CB C N N 105 CYS SG S N N 106 CYS OXT O N N 107 CYS H H N N 108 CYS H2 H N N 109 CYS HA H N N 110 CYS HB2 H N N 111 CYS HB3 H N N 112 CYS HG H N N 113 CYS HXT H N N 114 FGA N N N N 115 FGA CA C N R 116 FGA C C N N 117 FGA O O N N 118 FGA CB C N N 119 FGA CG C N N 120 FGA CD C N N 121 FGA OE1 O N N 122 FGA OE2 O N N 123 FGA OXT O N N 124 FGA H H N N 125 FGA H2 H N N 126 FGA HA H N N 127 FGA HB2 H N N 128 FGA HB3 H N N 129 FGA HG2 H N N 130 FGA HG3 H N N 131 FGA HE2 H N N 132 FGA HXT H N N 133 GLN N N N N 134 GLN CA C N S 135 GLN C C N N 136 GLN O O N N 137 GLN CB C N N 138 GLN CG C N N 139 GLN CD C N N 140 GLN OE1 O N N 141 GLN NE2 N N N 142 GLN OXT O N N 143 GLN H H N N 144 GLN H2 H N N 145 GLN HA H N N 146 GLN HB2 H N N 147 GLN HB3 H N N 148 GLN HG2 H N N 149 GLN HG3 H N N 150 GLN HE21 H N N 151 GLN HE22 H N N 152 GLN HXT H N N 153 GLU N N N N 154 GLU CA C N S 155 GLU C C N N 156 GLU O O N N 157 GLU CB C N N 158 GLU CG C N N 159 GLU CD C N N 160 GLU OE1 O N N 161 GLU OE2 O N N 162 GLU OXT O N N 163 GLU H H N N 164 GLU H2 H N N 165 GLU HA H N N 166 GLU HB2 H N N 167 GLU HB3 H N N 168 GLU HG2 H N N 169 GLU HG3 H N N 170 GLU HE2 H N N 171 GLU HXT H N N 172 GLY N N N N 173 GLY CA C N N 174 GLY C C N N 175 GLY O O N N 176 GLY OXT O N N 177 GLY H H N N 178 GLY H2 H N N 179 GLY HA2 H N N 180 GLY HA3 H N N 181 GLY HXT H N N 182 HIS N N N N 183 HIS CA C N S 184 HIS C C N N 185 HIS O O N N 186 HIS CB C N N 187 HIS CG C Y N 188 HIS ND1 N Y N 189 HIS CD2 C Y N 190 HIS CE1 C Y N 191 HIS NE2 N Y N 192 HIS OXT O N N 193 HIS H H N N 194 HIS H2 H N N 195 HIS HA H N N 196 HIS HB2 H N N 197 HIS HB3 H N N 198 HIS HD1 H N N 199 HIS HD2 H N N 200 HIS HE1 H N N 201 HIS HE2 H N N 202 HIS HXT H N N 203 HOH O O N N 204 HOH H1 H N N 205 HOH H2 H N N 206 ILE N N N N 207 ILE CA C N S 208 ILE C C N N 209 ILE O O N N 210 ILE CB C N S 211 ILE CG1 C N N 212 ILE CG2 C N N 213 ILE CD1 C N N 214 ILE OXT O N N 215 ILE H H N N 216 ILE H2 H N N 217 ILE HA H N N 218 ILE HB H N N 219 ILE HG12 H N N 220 ILE HG13 H N N 221 ILE HG21 H N N 222 ILE HG22 H N N 223 ILE HG23 H N N 224 ILE HD11 H N N 225 ILE HD12 H N N 226 ILE HD13 H N N 227 ILE HXT H N N 228 LEU N N N N 229 LEU CA C N S 230 LEU C C N N 231 LEU O O N N 232 LEU CB C N N 233 LEU CG C N N 234 LEU CD1 C N N 235 LEU CD2 C N N 236 LEU OXT O N N 237 LEU H H N N 238 LEU H2 H N N 239 LEU HA H N N 240 LEU HB2 H N N 241 LEU HB3 H N N 242 LEU HG H N N 243 LEU HD11 H N N 244 LEU HD12 H N N 245 LEU HD13 H N N 246 LEU HD21 H N N 247 LEU HD22 H N N 248 LEU HD23 H N N 249 LEU HXT H N N 250 LYS N N N N 251 LYS CA C N S 252 LYS C C N N 253 LYS O O N N 254 LYS CB C N N 255 LYS CG C N N 256 LYS CD C N N 257 LYS CE C N N 258 LYS NZ N N N 259 LYS OXT O N N 260 LYS H H N N 261 LYS H2 H N N 262 LYS HA H N N 263 LYS HB2 H N N 264 LYS HB3 H N N 265 LYS HG2 H N N 266 LYS HG3 H N N 267 LYS HD2 H N N 268 LYS HD3 H N N 269 LYS HE2 H N N 270 LYS HE3 H N N 271 LYS HZ1 H N N 272 LYS HZ2 H N N 273 LYS HZ3 H N N 274 LYS HXT H N N 275 MET N N N N 276 MET CA C N S 277 MET C C N N 278 MET O O N N 279 MET CB C N N 280 MET CG C N N 281 MET SD S N N 282 MET CE C N N 283 MET OXT O N N 284 MET H H N N 285 MET H2 H N N 286 MET HA H N N 287 MET HB2 H N N 288 MET HB3 H N N 289 MET HG2 H N N 290 MET HG3 H N N 291 MET HE1 H N N 292 MET HE2 H N N 293 MET HE3 H N N 294 MET HXT H N N 295 MUB C1 C N S 296 MUB C2 C N R 297 MUB C3 C N R 298 MUB C4 C N S 299 MUB C5 C N R 300 MUB C6 C N N 301 MUB C7 C N N 302 MUB C8 C N N 303 MUB C9 C N R 304 MUB C10 C N N 305 MUB C11 C N N 306 MUB O1 O N N 307 MUB O3 O N N 308 MUB O4 O N N 309 MUB O5 O N N 310 MUB O6 O N N 311 MUB O7 O N N 312 MUB O11 O N N 313 MUB O10 O N N 314 MUB N2 N N N 315 MUB H1 H N N 316 MUB H2 H N N 317 MUB HN2 H N N 318 MUB H81 H N N 319 MUB H82 H N N 320 MUB H83 H N N 321 MUB H3 H N N 322 MUB H9 H N N 323 MUB H111 H N N 324 MUB H112 H N N 325 MUB H113 H N N 326 MUB H4 H N N 327 MUB H5 H N N 328 MUB H61 H N N 329 MUB H62 H N N 330 MUB HO6 H N N 331 MUB HO4 H N N 332 MUB HO11 H N N 333 MUB HO1 H N N 334 PHE N N N N 335 PHE CA C N S 336 PHE C C N N 337 PHE O O N N 338 PHE CB C N N 339 PHE CG C Y N 340 PHE CD1 C Y N 341 PHE CD2 C Y N 342 PHE CE1 C Y N 343 PHE CE2 C Y N 344 PHE CZ C Y N 345 PHE OXT O N N 346 PHE H H N N 347 PHE H2 H N N 348 PHE HA H N N 349 PHE HB2 H N N 350 PHE HB3 H N N 351 PHE HD1 H N N 352 PHE HD2 H N N 353 PHE HE1 H N N 354 PHE HE2 H N N 355 PHE HZ H N N 356 PHE HXT H N N 357 PRO N N N N 358 PRO CA C N S 359 PRO C C N N 360 PRO O O N N 361 PRO CB C N N 362 PRO CG C N N 363 PRO CD C N N 364 PRO OXT O N N 365 PRO H H N N 366 PRO HA H N N 367 PRO HB2 H N N 368 PRO HB3 H N N 369 PRO HG2 H N N 370 PRO HG3 H N N 371 PRO HD2 H N N 372 PRO HD3 H N N 373 PRO HXT H N N 374 SER N N N N 375 SER CA C N S 376 SER C C N N 377 SER O O N N 378 SER CB C N N 379 SER OG O N N 380 SER OXT O N N 381 SER H H N N 382 SER H2 H N N 383 SER HA H N N 384 SER HB2 H N N 385 SER HB3 H N N 386 SER HG H N N 387 SER HXT H N N 388 THR N N N N 389 THR CA C N S 390 THR C C N N 391 THR O O N N 392 THR CB C N R 393 THR OG1 O N N 394 THR CG2 C N N 395 THR OXT O N N 396 THR H H N N 397 THR H2 H N N 398 THR HA H N N 399 THR HB H N N 400 THR HG1 H N N 401 THR HG21 H N N 402 THR HG22 H N N 403 THR HG23 H N N 404 THR HXT H N N 405 TRP N N N N 406 TRP CA C N S 407 TRP C C N N 408 TRP O O N N 409 TRP CB C N N 410 TRP CG C Y N 411 TRP CD1 C Y N 412 TRP CD2 C Y N 413 TRP NE1 N Y N 414 TRP CE2 C Y N 415 TRP CE3 C Y N 416 TRP CZ2 C Y N 417 TRP CZ3 C Y N 418 TRP CH2 C Y N 419 TRP OXT O N N 420 TRP H H N N 421 TRP H2 H N N 422 TRP HA H N N 423 TRP HB2 H N N 424 TRP HB3 H N N 425 TRP HD1 H N N 426 TRP HE1 H N N 427 TRP HE3 H N N 428 TRP HZ2 H N N 429 TRP HZ3 H N N 430 TRP HH2 H N N 431 TRP HXT H N N 432 TYR N N N N 433 TYR CA C N S 434 TYR C C N N 435 TYR O O N N 436 TYR CB C N N 437 TYR CG C Y N 438 TYR CD1 C Y N 439 TYR CD2 C Y N 440 TYR CE1 C Y N 441 TYR CE2 C Y N 442 TYR CZ C Y N 443 TYR OH O N N 444 TYR OXT O N N 445 TYR H H N N 446 TYR H2 H N N 447 TYR HA H N N 448 TYR HB2 H N N 449 TYR HB3 H N N 450 TYR HD1 H N N 451 TYR HD2 H N N 452 TYR HE1 H N N 453 TYR HE2 H N N 454 TYR HH H N N 455 TYR HXT H N N 456 UDP N1 N N N 457 UDP C2 C N N 458 UDP N3 N N N 459 UDP C4 C N N 460 UDP C5 C N N 461 UDP C6 C N N 462 UDP O2 O N N 463 UDP O4 O N N 464 UDP "C1'" C N R 465 UDP "C2'" C N R 466 UDP "O2'" O N N 467 UDP "C3'" C N S 468 UDP "C4'" C N R 469 UDP "O4'" O N N 470 UDP "O3'" O N N 471 UDP "C5'" C N N 472 UDP "O5'" O N N 473 UDP PA P N N 474 UDP O1A O N N 475 UDP O2A O N N 476 UDP O3A O N N 477 UDP PB P N N 478 UDP O1B O N N 479 UDP O2B O N N 480 UDP O3B O N N 481 UDP HN3 H N N 482 UDP H5 H N N 483 UDP H6 H N N 484 UDP "H1'" H N N 485 UDP "H2'" H N N 486 UDP "HO2'" H N N 487 UDP "H3'" H N N 488 UDP "H4'" H N N 489 UDP "HO3'" H N N 490 UDP "H5'1" H N N 491 UDP "H5'2" H N N 492 UDP HOA2 H N N 493 UDP HOB2 H N N 494 UDP HOB3 H N N 495 VAL N N N N 496 VAL CA C N S 497 VAL C C N N 498 VAL O O N N 499 VAL CB C N N 500 VAL CG1 C N N 501 VAL CG2 C N N 502 VAL OXT O N N 503 VAL H H N N 504 VAL H2 H N N 505 VAL HA H N N 506 VAL HB H N N 507 VAL HG11 H N N 508 VAL HG12 H N N 509 VAL HG13 H N N 510 VAL HG21 H N N 511 VAL HG22 H N N 512 VAL HG23 H N N 513 VAL HXT H N N 514 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 API C CA sing N N 13 API C O doub N N 14 API C OXT sing N N 15 API CA C3 sing N N 16 API CA N sing N N 17 API CA HA sing N N 18 API C3 C4 sing N N 19 API C3 H31 sing N N 20 API C3 H32 sing N N 21 API C4 C5 sing N N 22 API C4 H41 sing N N 23 API C4 H42 sing N N 24 API C5 C6 sing N N 25 API C5 H51 sing N N 26 API C5 H52 sing N N 27 API C6 C7 sing N N 28 API C6 N6 sing N N 29 API C6 H6 sing N N 30 API C7 O3 doub N N 31 API C7 O4 sing N N 32 API OXT HXT sing N N 33 API O4 HO4 sing N N 34 API N H sing N N 35 API N H2 sing N N 36 API N6 HN61 sing N N 37 API N6 HN62 sing N N 38 ARG N CA sing N N 39 ARG N H sing N N 40 ARG N H2 sing N N 41 ARG CA C sing N N 42 ARG CA CB sing N N 43 ARG CA HA sing N N 44 ARG C O doub N N 45 ARG C OXT sing N N 46 ARG CB CG sing N N 47 ARG CB HB2 sing N N 48 ARG CB HB3 sing N N 49 ARG CG CD sing N N 50 ARG CG HG2 sing N N 51 ARG CG HG3 sing N N 52 ARG CD NE sing N N 53 ARG CD HD2 sing N N 54 ARG CD HD3 sing N N 55 ARG NE CZ sing N N 56 ARG NE HE sing N N 57 ARG CZ NH1 sing N N 58 ARG CZ NH2 doub N N 59 ARG NH1 HH11 sing N N 60 ARG NH1 HH12 sing N N 61 ARG NH2 HH21 sing N N 62 ARG NH2 HH22 sing N N 63 ARG OXT HXT sing N N 64 ASN N CA sing N N 65 ASN N H sing N N 66 ASN N H2 sing N N 67 ASN CA C sing N N 68 ASN CA CB sing N N 69 ASN CA HA sing N N 70 ASN C O doub N N 71 ASN C OXT sing N N 72 ASN CB CG sing N N 73 ASN CB HB2 sing N N 74 ASN CB HB3 sing N N 75 ASN CG OD1 doub N N 76 ASN CG ND2 sing N N 77 ASN ND2 HD21 sing N N 78 ASN ND2 HD22 sing N N 79 ASN OXT HXT sing N N 80 ASP N CA sing N N 81 ASP N H sing N N 82 ASP N H2 sing N N 83 ASP CA C sing N N 84 ASP CA CB sing N N 85 ASP CA HA sing N N 86 ASP C O doub N N 87 ASP C OXT sing N N 88 ASP CB CG sing N N 89 ASP CB HB2 sing N N 90 ASP CB HB3 sing N N 91 ASP CG OD1 doub N N 92 ASP CG OD2 sing N N 93 ASP OD2 HD2 sing N N 94 ASP OXT HXT sing N N 95 CYS N CA sing N N 96 CYS N H sing N N 97 CYS N H2 sing N N 98 CYS CA C sing N N 99 CYS CA CB sing N N 100 CYS CA HA sing N N 101 CYS C O doub N N 102 CYS C OXT sing N N 103 CYS CB SG sing N N 104 CYS CB HB2 sing N N 105 CYS CB HB3 sing N N 106 CYS SG HG sing N N 107 CYS OXT HXT sing N N 108 FGA N CA sing N N 109 FGA N H sing N N 110 FGA N H2 sing N N 111 FGA CA C sing N N 112 FGA CA CB sing N N 113 FGA CA HA sing N N 114 FGA C O doub N N 115 FGA C OXT sing N N 116 FGA CB CG sing N N 117 FGA CB HB2 sing N N 118 FGA CB HB3 sing N N 119 FGA CG CD sing N N 120 FGA CG HG2 sing N N 121 FGA CG HG3 sing N N 122 FGA CD OE1 doub N N 123 FGA CD OE2 sing N N 124 FGA OE2 HE2 sing N N 125 FGA OXT HXT sing N N 126 GLN N CA sing N N 127 GLN N H sing N N 128 GLN N H2 sing N N 129 GLN CA C sing N N 130 GLN CA CB sing N N 131 GLN CA HA sing N N 132 GLN C O doub N N 133 GLN C OXT sing N N 134 GLN CB CG sing N N 135 GLN CB HB2 sing N N 136 GLN CB HB3 sing N N 137 GLN CG CD sing N N 138 GLN CG HG2 sing N N 139 GLN CG HG3 sing N N 140 GLN CD OE1 doub N N 141 GLN CD NE2 sing N N 142 GLN NE2 HE21 sing N N 143 GLN NE2 HE22 sing N N 144 GLN OXT HXT sing N N 145 GLU N CA sing N N 146 GLU N H sing N N 147 GLU N H2 sing N N 148 GLU CA C sing N N 149 GLU CA CB sing N N 150 GLU CA HA sing N N 151 GLU C O doub N N 152 GLU C OXT sing N N 153 GLU CB CG sing N N 154 GLU CB HB2 sing N N 155 GLU CB HB3 sing N N 156 GLU CG CD sing N N 157 GLU CG HG2 sing N N 158 GLU CG HG3 sing N N 159 GLU CD OE1 doub N N 160 GLU CD OE2 sing N N 161 GLU OE2 HE2 sing N N 162 GLU OXT HXT sing N N 163 GLY N CA sing N N 164 GLY N H sing N N 165 GLY N H2 sing N N 166 GLY CA C sing N N 167 GLY CA HA2 sing N N 168 GLY CA HA3 sing N N 169 GLY C O doub N N 170 GLY C OXT sing N N 171 GLY OXT HXT sing N N 172 HIS N CA sing N N 173 HIS N H sing N N 174 HIS N H2 sing N N 175 HIS CA C sing N N 176 HIS CA CB sing N N 177 HIS CA HA sing N N 178 HIS C O doub N N 179 HIS C OXT sing N N 180 HIS CB CG sing N N 181 HIS CB HB2 sing N N 182 HIS CB HB3 sing N N 183 HIS CG ND1 sing Y N 184 HIS CG CD2 doub Y N 185 HIS ND1 CE1 doub Y N 186 HIS ND1 HD1 sing N N 187 HIS CD2 NE2 sing Y N 188 HIS CD2 HD2 sing N N 189 HIS CE1 NE2 sing Y N 190 HIS CE1 HE1 sing N N 191 HIS NE2 HE2 sing N N 192 HIS OXT HXT sing N N 193 HOH O H1 sing N N 194 HOH O H2 sing N N 195 ILE N CA sing N N 196 ILE N H sing N N 197 ILE N H2 sing N N 198 ILE CA C sing N N 199 ILE CA CB sing N N 200 ILE CA HA sing N N 201 ILE C O doub N N 202 ILE C OXT sing N N 203 ILE CB CG1 sing N N 204 ILE CB CG2 sing N N 205 ILE CB HB sing N N 206 ILE CG1 CD1 sing N N 207 ILE CG1 HG12 sing N N 208 ILE CG1 HG13 sing N N 209 ILE CG2 HG21 sing N N 210 ILE CG2 HG22 sing N N 211 ILE CG2 HG23 sing N N 212 ILE CD1 HD11 sing N N 213 ILE CD1 HD12 sing N N 214 ILE CD1 HD13 sing N N 215 ILE OXT HXT sing N N 216 LEU N CA sing N N 217 LEU N H sing N N 218 LEU N H2 sing N N 219 LEU CA C sing N N 220 LEU CA CB sing N N 221 LEU CA HA sing N N 222 LEU C O doub N N 223 LEU C OXT sing N N 224 LEU CB CG sing N N 225 LEU CB HB2 sing N N 226 LEU CB HB3 sing N N 227 LEU CG CD1 sing N N 228 LEU CG CD2 sing N N 229 LEU CG HG sing N N 230 LEU CD1 HD11 sing N N 231 LEU CD1 HD12 sing N N 232 LEU CD1 HD13 sing N N 233 LEU CD2 HD21 sing N N 234 LEU CD2 HD22 sing N N 235 LEU CD2 HD23 sing N N 236 LEU OXT HXT sing N N 237 LYS N CA sing N N 238 LYS N H sing N N 239 LYS N H2 sing N N 240 LYS CA C sing N N 241 LYS CA CB sing N N 242 LYS CA HA sing N N 243 LYS C O doub N N 244 LYS C OXT sing N N 245 LYS CB CG sing N N 246 LYS CB HB2 sing N N 247 LYS CB HB3 sing N N 248 LYS CG CD sing N N 249 LYS CG HG2 sing N N 250 LYS CG HG3 sing N N 251 LYS CD CE sing N N 252 LYS CD HD2 sing N N 253 LYS CD HD3 sing N N 254 LYS CE NZ sing N N 255 LYS CE HE2 sing N N 256 LYS CE HE3 sing N N 257 LYS NZ HZ1 sing N N 258 LYS NZ HZ2 sing N N 259 LYS NZ HZ3 sing N N 260 LYS OXT HXT sing N N 261 MET N CA sing N N 262 MET N H sing N N 263 MET N H2 sing N N 264 MET CA C sing N N 265 MET CA CB sing N N 266 MET CA HA sing N N 267 MET C O doub N N 268 MET C OXT sing N N 269 MET CB CG sing N N 270 MET CB HB2 sing N N 271 MET CB HB3 sing N N 272 MET CG SD sing N N 273 MET CG HG2 sing N N 274 MET CG HG3 sing N N 275 MET SD CE sing N N 276 MET CE HE1 sing N N 277 MET CE HE2 sing N N 278 MET CE HE3 sing N N 279 MET OXT HXT sing N N 280 MUB C1 C2 sing N N 281 MUB C2 C3 sing N N 282 MUB C3 C4 sing N N 283 MUB C4 C5 sing N N 284 MUB C5 C6 sing N N 285 MUB C7 C8 sing N N 286 MUB C9 C10 sing N N 287 MUB C9 C11 sing N N 288 MUB C1 O1 sing N N 289 MUB C3 O3 sing N N 290 MUB C9 O3 sing N N 291 MUB C4 O4 sing N N 292 MUB C1 O5 sing N N 293 MUB C5 O5 sing N N 294 MUB C6 O6 sing N N 295 MUB C7 O7 doub N N 296 MUB C10 O11 sing N N 297 MUB C10 O10 doub N N 298 MUB C2 N2 sing N N 299 MUB C7 N2 sing N N 300 MUB C1 H1 sing N N 301 MUB C2 H2 sing N N 302 MUB N2 HN2 sing N N 303 MUB C8 H81 sing N N 304 MUB C8 H82 sing N N 305 MUB C8 H83 sing N N 306 MUB C3 H3 sing N N 307 MUB C9 H9 sing N N 308 MUB C11 H111 sing N N 309 MUB C11 H112 sing N N 310 MUB C11 H113 sing N N 311 MUB C4 H4 sing N N 312 MUB C5 H5 sing N N 313 MUB C6 H61 sing N N 314 MUB C6 H62 sing N N 315 MUB O6 HO6 sing N N 316 MUB O4 HO4 sing N N 317 MUB O11 HO11 sing N N 318 MUB O1 HO1 sing N N 319 PHE N CA sing N N 320 PHE N H sing N N 321 PHE N H2 sing N N 322 PHE CA C sing N N 323 PHE CA CB sing N N 324 PHE CA HA sing N N 325 PHE C O doub N N 326 PHE C OXT sing N N 327 PHE CB CG sing N N 328 PHE CB HB2 sing N N 329 PHE CB HB3 sing N N 330 PHE CG CD1 doub Y N 331 PHE CG CD2 sing Y N 332 PHE CD1 CE1 sing Y N 333 PHE CD1 HD1 sing N N 334 PHE CD2 CE2 doub Y N 335 PHE CD2 HD2 sing N N 336 PHE CE1 CZ doub Y N 337 PHE CE1 HE1 sing N N 338 PHE CE2 CZ sing Y N 339 PHE CE2 HE2 sing N N 340 PHE CZ HZ sing N N 341 PHE OXT HXT sing N N 342 PRO N CA sing N N 343 PRO N CD sing N N 344 PRO N H sing N N 345 PRO CA C sing N N 346 PRO CA CB sing N N 347 PRO CA HA sing N N 348 PRO C O doub N N 349 PRO C OXT sing N N 350 PRO CB CG sing N N 351 PRO CB HB2 sing N N 352 PRO CB HB3 sing N N 353 PRO CG CD sing N N 354 PRO CG HG2 sing N N 355 PRO CG HG3 sing N N 356 PRO CD HD2 sing N N 357 PRO CD HD3 sing N N 358 PRO OXT HXT sing N N 359 SER N CA sing N N 360 SER N H sing N N 361 SER N H2 sing N N 362 SER CA C sing N N 363 SER CA CB sing N N 364 SER CA HA sing N N 365 SER C O doub N N 366 SER C OXT sing N N 367 SER CB OG sing N N 368 SER CB HB2 sing N N 369 SER CB HB3 sing N N 370 SER OG HG sing N N 371 SER OXT HXT sing N N 372 THR N CA sing N N 373 THR N H sing N N 374 THR N H2 sing N N 375 THR CA C sing N N 376 THR CA CB sing N N 377 THR CA HA sing N N 378 THR C O doub N N 379 THR C OXT sing N N 380 THR CB OG1 sing N N 381 THR CB CG2 sing N N 382 THR CB HB sing N N 383 THR OG1 HG1 sing N N 384 THR CG2 HG21 sing N N 385 THR CG2 HG22 sing N N 386 THR CG2 HG23 sing N N 387 THR OXT HXT sing N N 388 TRP N CA sing N N 389 TRP N H sing N N 390 TRP N H2 sing N N 391 TRP CA C sing N N 392 TRP CA CB sing N N 393 TRP CA HA sing N N 394 TRP C O doub N N 395 TRP C OXT sing N N 396 TRP CB CG sing N N 397 TRP CB HB2 sing N N 398 TRP CB HB3 sing N N 399 TRP CG CD1 doub Y N 400 TRP CG CD2 sing Y N 401 TRP CD1 NE1 sing Y N 402 TRP CD1 HD1 sing N N 403 TRP CD2 CE2 doub Y N 404 TRP CD2 CE3 sing Y N 405 TRP NE1 CE2 sing Y N 406 TRP NE1 HE1 sing N N 407 TRP CE2 CZ2 sing Y N 408 TRP CE3 CZ3 doub Y N 409 TRP CE3 HE3 sing N N 410 TRP CZ2 CH2 doub Y N 411 TRP CZ2 HZ2 sing N N 412 TRP CZ3 CH2 sing Y N 413 TRP CZ3 HZ3 sing N N 414 TRP CH2 HH2 sing N N 415 TRP OXT HXT sing N N 416 TYR N CA sing N N 417 TYR N H sing N N 418 TYR N H2 sing N N 419 TYR CA C sing N N 420 TYR CA CB sing N N 421 TYR CA HA sing N N 422 TYR C O doub N N 423 TYR C OXT sing N N 424 TYR CB CG sing N N 425 TYR CB HB2 sing N N 426 TYR CB HB3 sing N N 427 TYR CG CD1 doub Y N 428 TYR CG CD2 sing Y N 429 TYR CD1 CE1 sing Y N 430 TYR CD1 HD1 sing N N 431 TYR CD2 CE2 doub Y N 432 TYR CD2 HD2 sing N N 433 TYR CE1 CZ doub Y N 434 TYR CE1 HE1 sing N N 435 TYR CE2 CZ sing Y N 436 TYR CE2 HE2 sing N N 437 TYR CZ OH sing N N 438 TYR OH HH sing N N 439 TYR OXT HXT sing N N 440 UDP N1 C2 sing N N 441 UDP N1 C6 sing N N 442 UDP N1 "C1'" sing N N 443 UDP C2 N3 sing N N 444 UDP C2 O2 doub N N 445 UDP N3 C4 sing N N 446 UDP N3 HN3 sing N N 447 UDP C4 C5 sing N N 448 UDP C4 O4 doub N N 449 UDP C5 C6 doub N N 450 UDP C5 H5 sing N N 451 UDP C6 H6 sing N N 452 UDP "C1'" "C2'" sing N N 453 UDP "C1'" "O4'" sing N N 454 UDP "C1'" "H1'" sing N N 455 UDP "C2'" "O2'" sing N N 456 UDP "C2'" "C3'" sing N N 457 UDP "C2'" "H2'" sing N N 458 UDP "O2'" "HO2'" sing N N 459 UDP "C3'" "C4'" sing N N 460 UDP "C3'" "O3'" sing N N 461 UDP "C3'" "H3'" sing N N 462 UDP "C4'" "O4'" sing N N 463 UDP "C4'" "C5'" sing N N 464 UDP "C4'" "H4'" sing N N 465 UDP "O3'" "HO3'" sing N N 466 UDP "C5'" "O5'" sing N N 467 UDP "C5'" "H5'1" sing N N 468 UDP "C5'" "H5'2" sing N N 469 UDP "O5'" PA sing N N 470 UDP PA O1A doub N N 471 UDP PA O2A sing N N 472 UDP PA O3A sing N N 473 UDP O2A HOA2 sing N N 474 UDP O3A PB sing N N 475 UDP PB O1B doub N N 476 UDP PB O2B sing N N 477 UDP PB O3B sing N N 478 UDP O2B HOB2 sing N N 479 UDP O3B HOB3 sing N N 480 VAL N CA sing N N 481 VAL N H sing N N 482 VAL N H2 sing N N 483 VAL CA C sing N N 484 VAL CA CB sing N N 485 VAL CA HA sing N N 486 VAL C O doub N N 487 VAL C OXT sing N N 488 VAL CB CG1 sing N N 489 VAL CB CG2 sing N N 490 VAL CB HB sing N N 491 VAL CG1 HG11 sing N N 492 VAL CG1 HG12 sing N N 493 VAL CG1 HG13 sing N N 494 VAL CG2 HG21 sing N N 495 VAL CG2 HG22 sing N N 496 VAL CG2 HG23 sing N N 497 VAL OXT HXT sing N N 498 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1GG4 _pdbx_initial_refinement_model.details 'PDB ENTRY 1GG4' # _atom_sites.entry_id 4CVK _atom_sites.fract_transf_matrix[1][1] 0.017298 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.011456 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.010798 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S # loop_