HEADER    LIGASE                                  28-MAR-14   4CVK              
TITLE     PAMURF IN COMPLEX WITH UDP-MURNAC-TRIPEPTIDE (MDAP)                   
COMPND    MOL_ID: 1;                                                            
COMPND   2 MOLECULE: UDP-N-ACETYLMURAMOYL-TRIPEPTIDE--D-ALANYL-D-ALANINE LIGASE;
COMPND   3 CHAIN: A;                                                            
COMPND   4 ENGINEERED: YES;                                                     
COMPND   5 MOL_ID: 2;                                                           
COMPND   6 MOLECULE: ALA-FGA-API;                                               
COMPND   7 CHAIN: B;                                                            
COMPND   8 ENGINEERED: YES                                                      
SOURCE    MOL_ID: 1;                                                            
SOURCE   2 ORGANISM_SCIENTIFIC: PSEUDOMONAS AERUGINOSA PAO1;                    
SOURCE   3 ORGANISM_TAXID: 208964;                                              
SOURCE   4 ATCC: 15692;                                                         
SOURCE   5 GENE: MURF;                                                          
SOURCE   6 EXPRESSION_SYSTEM: ESCHERICHIA COLI;                                 
SOURCE   7 EXPRESSION_SYSTEM_TAXID: 562;                                        
SOURCE   8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID;                              
SOURCE   9 EXPRESSION_SYSTEM_VECTOR: PET;                                       
SOURCE  10 MOL_ID: 2;                                                           
SOURCE  11 SYNTHETIC: YES;                                                      
SOURCE  12 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT;                            
SOURCE  13 ORGANISM_TAXID: 32630                                                
KEYWDS    LIGASE, MURF, TRIPEPTIDE                                              
EXPDTA    X-RAY DIFFRACTION                                                     
AUTHOR    K.M.RUANE,V.MAJCE                                                     
REVDAT   7   31-JAN-24 4CVK    1       REMARK                                   
REVDAT   6   15-NOV-23 4CVK    1       LINK   ATOM                              
REVDAT   5   07-DEC-22 4CVK    1       COMPND SOURCE REMARK DBREF               
REVDAT   5 2                   1       SEQRES HETSYN LINK   ATOM                
REVDAT   4   29-JUL-20 4CVK    1       COMPND REMARK HETNAM LINK                
REVDAT   4 2                   1       SITE                                     
REVDAT   3   23-SEP-15 4CVK    1       REMARK                                   
REVDAT   2   29-APR-15 4CVK    1       COMPND                                   
REVDAT   1   22-APR-15 4CVK    0                                                
JRNL        AUTH   V.MAJCE,K.RUANE                                              
JRNL        TITL   PAMURF IN COMPLEX WITH UDP-MURNAC-TRIPEPTIDE (MDAP)          
JRNL        REF    TO BE PUBLISHED                                              
JRNL        REFN                                                                
REMARK   2                                                                      
REMARK   2 RESOLUTION.    1.92 ANGSTROMS.                                       
REMARK   3                                                                      
REMARK   3 REFINEMENT.                                                          
REMARK   3   PROGRAM     : REFMAC 5.8.0049                                      
REMARK   3   AUTHORS     : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER,              
REMARK   3               : NICHOLLS,WINN,LONG,VAGIN                             
REMARK   3                                                                      
REMARK   3    REFINEMENT TARGET : MAXIMUM LIKELIHOOD                            
REMARK   3                                                                      
REMARK   3  DATA USED IN REFINEMENT.                                            
REMARK   3   RESOLUTION RANGE HIGH (ANGSTROMS) : 1.92                           
REMARK   3   RESOLUTION RANGE LOW  (ANGSTROMS) : 49.04                          
REMARK   3   DATA CUTOFF            (SIGMA(F)) : NULL                           
REMARK   3   COMPLETENESS FOR RANGE        (%) : 99.0                           
REMARK   3   NUMBER OF REFLECTIONS             : 34360                          
REMARK   3                                                                      
REMARK   3  FIT TO DATA USED IN REFINEMENT.                                     
REMARK   3   CROSS-VALIDATION METHOD          : THROUGHOUT                      
REMARK   3   FREE R VALUE TEST SET SELECTION  : RANDOM                          
REMARK   3   R VALUE     (WORKING + TEST SET) : 0.197                           
REMARK   3   R VALUE            (WORKING SET) : 0.196                           
REMARK   3   FREE R VALUE                     : 0.226                           
REMARK   3   FREE R VALUE TEST SET SIZE   (%) : 5.000                           
REMARK   3   FREE R VALUE TEST SET COUNT      : 1804                            
REMARK   3                                                                      
REMARK   3  FIT IN THE HIGHEST RESOLUTION BIN.                                  
REMARK   3   TOTAL NUMBER OF BINS USED           : 20                           
REMARK   3   BIN RESOLUTION RANGE HIGH       (A) : 1.92                         
REMARK   3   BIN RESOLUTION RANGE LOW        (A) : 1.97                         
REMARK   3   REFLECTION IN BIN     (WORKING SET) : 2485                         
REMARK   3   BIN COMPLETENESS (WORKING+TEST) (%) : 99.62                        
REMARK   3   BIN R VALUE           (WORKING SET) : 0.2600                       
REMARK   3   BIN FREE R VALUE SET COUNT          : 159                          
REMARK   3   BIN FREE R VALUE                    : 0.3110                       
REMARK   3                                                                      
REMARK   3  NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT.                    
REMARK   3   PROTEIN ATOMS            : 3163                                    
REMARK   3   NUCLEIC ACID ATOMS       : 0                                       
REMARK   3   HETEROGEN ATOMS          : 43                                      
REMARK   3   SOLVENT ATOMS            : 84                                      
REMARK   3                                                                      
REMARK   3  B VALUES.                                                           
REMARK   3   FROM WILSON PLOT           (A**2) : NULL                           
REMARK   3   MEAN B VALUE      (OVERALL, A**2) : 23.30                          
REMARK   3   OVERALL ANISOTROPIC B VALUE.                                       
REMARK   3    B11 (A**2) : -0.99000                                             
REMARK   3    B22 (A**2) : 1.47000                                              
REMARK   3    B33 (A**2) : -0.48000                                             
REMARK   3    B12 (A**2) : 0.00000                                              
REMARK   3    B13 (A**2) : 0.00000                                              
REMARK   3    B23 (A**2) : 0.00000                                              
REMARK   3                                                                      
REMARK   3  ESTIMATED OVERALL COORDINATE ERROR.                                 
REMARK   3   ESU BASED ON R VALUE                            (A): 0.151         
REMARK   3   ESU BASED ON FREE R VALUE                       (A): 0.137         
REMARK   3   ESU BASED ON MAXIMUM LIKELIHOOD                 (A): 0.106         
REMARK   3   ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.766         
REMARK   3                                                                      
REMARK   3 CORRELATION COEFFICIENTS.                                            
REMARK   3   CORRELATION COEFFICIENT FO-FC      : 0.944                         
REMARK   3   CORRELATION COEFFICIENT FO-FC FREE : 0.932                         
REMARK   3                                                                      
REMARK   3  RMS DEVIATIONS FROM IDEAL VALUES        COUNT    RMS    WEIGHT      
REMARK   3   BOND LENGTHS REFINED ATOMS        (A):  3255 ; 0.012 ; 0.019       
REMARK   3   BOND LENGTHS OTHERS               (A):  3192 ; 0.002 ; 0.020       
REMARK   3   BOND ANGLES REFINED ATOMS   (DEGREES):  4431 ; 1.558 ; 1.999       
REMARK   3   BOND ANGLES OTHERS          (DEGREES):  7293 ; 0.864 ; 3.007       
REMARK   3   TORSION ANGLES, PERIOD 1    (DEGREES):   436 ; 6.030 ; 5.000       
REMARK   3   TORSION ANGLES, PERIOD 2    (DEGREES):   117 ;30.346 ;23.846       
REMARK   3   TORSION ANGLES, PERIOD 3    (DEGREES):   491 ;12.920 ;15.000       
REMARK   3   TORSION ANGLES, PERIOD 4    (DEGREES):    23 ;14.669 ;15.000       
REMARK   3   CHIRAL-CENTER RESTRAINTS       (A**3):   542 ; 0.093 ; 0.200       
REMARK   3   GENERAL PLANES REFINED ATOMS      (A):  3731 ; 0.007 ; 0.021       
REMARK   3   GENERAL PLANES OTHERS             (A):   688 ; 0.001 ; 0.020       
REMARK   3   NON-BONDED CONTACTS REFINED ATOMS (A):  NULL ;  NULL ;  NULL       
REMARK   3   NON-BONDED CONTACTS OTHERS        (A):  NULL ;  NULL ;  NULL       
REMARK   3   NON-BONDED TORSION REFINED ATOMS  (A):  NULL ;  NULL ;  NULL       
REMARK   3   NON-BONDED TORSION OTHERS         (A):  NULL ;  NULL ;  NULL       
REMARK   3   H-BOND (X...Y) REFINED ATOMS      (A):  NULL ;  NULL ;  NULL       
REMARK   3   H-BOND (X...Y) OTHERS             (A):  NULL ;  NULL ;  NULL       
REMARK   3   POTENTIAL METAL-ION REFINED ATOMS (A):  NULL ;  NULL ;  NULL       
REMARK   3   POTENTIAL METAL-ION OTHERS        (A):  NULL ;  NULL ;  NULL       
REMARK   3   SYMMETRY VDW REFINED ATOMS        (A):  NULL ;  NULL ;  NULL       
REMARK   3   SYMMETRY VDW OTHERS               (A):  NULL ;  NULL ;  NULL       
REMARK   3   SYMMETRY H-BOND REFINED ATOMS     (A):  NULL ;  NULL ;  NULL       
REMARK   3   SYMMETRY H-BOND OTHERS            (A):  NULL ;  NULL ;  NULL       
REMARK   3   SYMMETRY METAL-ION REFINED ATOMS  (A):  NULL ;  NULL ;  NULL       
REMARK   3   SYMMETRY METAL-ION OTHERS         (A):  NULL ;  NULL ;  NULL       
REMARK   3                                                                      
REMARK   3  ISOTROPIC THERMAL FACTOR RESTRAINTS.     COUNT   RMS    WEIGHT      
REMARK   3   MAIN-CHAIN BOND REFINED ATOMS  (A**2):  1756 ; 1.530 ; 2.249       
REMARK   3   MAIN-CHAIN BOND OTHER ATOMS    (A**2):  1756 ; 1.529 ; 2.249       
REMARK   3   MAIN-CHAIN ANGLE REFINED ATOMS (A**2):  2188 ; 2.262 ; 3.357       
REMARK   3   MAIN-CHAIN ANGLE OTHER ATOMS   (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   SIDE-CHAIN BOND REFINED ATOMS  (A**2):  1499 ; 2.164 ; 2.468       
REMARK   3   SIDE-CHAIN BOND OTHER ATOMS    (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   SIDE-CHAIN ANGLE REFINED ATOMS (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   SIDE-CHAIN ANGLE OTHER ATOMS   (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   LONG RANGE B REFINED ATOMS     (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   LONG RANGE B OTHER ATOMS       (A**2):  NULL ;  NULL ;  NULL       
REMARK   3                                                                      
REMARK   3 ANISOTROPIC THERMAL FACTOR RESTRAINTS.    COUNT   RMS   WEIGHT       
REMARK   3   RIGID-BOND RESTRAINTS          (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   SPHERICITY; FREE ATOMS         (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   SPHERICITY; BONDED ATOMS       (A**2):  NULL ;  NULL ;  NULL       
REMARK   3                                                                      
REMARK   3  NCS RESTRAINTS STATISTICS                                           
REMARK   3   NUMBER OF DIFFERENT NCS GROUPS : NULL                              
REMARK   3                                                                      
REMARK   3  TLS DETAILS                                                         
REMARK   3   NUMBER OF TLS GROUPS  : NULL                                       
REMARK   3                                                                      
REMARK   3  BULK SOLVENT MODELLING.                                             
REMARK   3   METHOD USED : MASK                                                 
REMARK   3   PARAMETERS FOR MASK CALCULATION                                    
REMARK   3   VDW PROBE RADIUS   : 1.20                                          
REMARK   3   ION PROBE RADIUS   : 0.80                                          
REMARK   3   SHRINKAGE RADIUS   : 0.80                                          
REMARK   3                                                                      
REMARK   3  OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING   
REMARK   3  POSITIONS. U VALUES REFINED INDIVIDUALLY                            
REMARK   4                                                                      
REMARK   4 4CVK COMPLIES WITH FORMAT V. 3.30, 13-JUL-11                         
REMARK 100                                                                      
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 28-MAR-14.                  
REMARK 100 THE DEPOSITION ID IS D_1290059027.                                   
REMARK 200                                                                      
REMARK 200 EXPERIMENTAL DETAILS                                                 
REMARK 200  EXPERIMENT TYPE                : X-RAY DIFFRACTION                  
REMARK 200  DATE OF DATA COLLECTION        : NULL                               
REMARK 200  TEMPERATURE           (KELVIN) : 100                                
REMARK 200  PH                             : NULL                               
REMARK 200  NUMBER OF CRYSTALS USED        : 1                                  
REMARK 200                                                                      
REMARK 200  SYNCHROTRON              (Y/N) : Y                                  
REMARK 200  RADIATION SOURCE               : DIAMOND                            
REMARK 200  BEAMLINE                       : I04-1                              
REMARK 200  X-RAY GENERATOR MODEL          : NULL                               
REMARK 200  MONOCHROMATIC OR LAUE    (M/L) : M                                  
REMARK 200  WAVELENGTH OR RANGE        (A) : 0.92                               
REMARK 200  MONOCHROMATOR                  : NULL                               
REMARK 200  OPTICS                         : NULL                               
REMARK 200                                                                      
REMARK 200  DETECTOR TYPE                  : PIXEL                              
REMARK 200  DETECTOR MANUFACTURER          : DECTRIS PILATUS 6M                 
REMARK 200  INTENSITY-INTEGRATION SOFTWARE : XIA2                               
REMARK 200  DATA SCALING SOFTWARE          : XIA2                               
REMARK 200                                                                      
REMARK 200  NUMBER OF UNIQUE REFLECTIONS   : 36216                              
REMARK 200  RESOLUTION RANGE HIGH      (A) : 1.920                              
REMARK 200  RESOLUTION RANGE LOW       (A) : 49.040                             
REMARK 200  REJECTION CRITERIA  (SIGMA(I)) : 2.400                              
REMARK 200                                                                      
REMARK 200 OVERALL.                                                             
REMARK 200  COMPLETENESS FOR RANGE     (%) : 99.3                               
REMARK 200  DATA REDUNDANCY                : 4.700                              
REMARK 200  R MERGE                    (I) : 0.09000                            
REMARK 200  R SYM                      (I) : NULL                               
REMARK 200  <I/SIGMA(I)> FOR THE DATA SET  : 13.2000                            
REMARK 200                                                                      
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.                                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.92                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE LOW  (A) : 1.97                     
REMARK 200  COMPLETENESS FOR SHELL     (%) : 99.8                               
REMARK 200  DATA REDUNDANCY IN SHELL       : 4.50                               
REMARK 200  R MERGE FOR SHELL          (I) : 0.59000                            
REMARK 200  R SYM FOR SHELL            (I) : NULL                               
REMARK 200  <I/SIGMA(I)> FOR SHELL         : 2.400                              
REMARK 200                                                                      
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH                              
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT        
REMARK 200 SOFTWARE USED: PHASER                                                
REMARK 200 STARTING MODEL: PDB ENTRY 1GG4                                       
REMARK 200                                                                      
REMARK 200 REMARK: NONE                                                         
REMARK 280                                                                      
REMARK 280 CRYSTAL                                                              
REMARK 280 SOLVENT CONTENT, VS   (%): 50.00                                     
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.50                     
REMARK 280                                                                      
REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M MG FORMATE, 20 % PEG3350           
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY                                            
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21                       
REMARK 290                                                                      
REMARK 290      SYMOP   SYMMETRY                                                
REMARK 290     NNNMMM   OPERATOR                                                
REMARK 290       1555   X,Y,Z                                                   
REMARK 290       2555   -X+1/2,-Y,Z+1/2                                         
REMARK 290       3555   -X,Y+1/2,-Z+1/2                                         
REMARK 290       4555   X+1/2,-Y+1/2,-Z                                         
REMARK 290                                                                      
REMARK 290     WHERE NNN -> OPERATOR NUMBER                                     
REMARK 290           MMM -> TRANSLATION VECTOR                                  
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS                            
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM             
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY                
REMARK 290 RELATED MOLECULES.                                                   
REMARK 290   SMTRY1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 290   SMTRY1   2 -1.000000  0.000000  0.000000       28.90500            
REMARK 290   SMTRY2   2  0.000000 -1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   2  0.000000  0.000000  1.000000       46.30500            
REMARK 290   SMTRY1   3 -1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   3  0.000000  1.000000  0.000000       43.64500            
REMARK 290   SMTRY3   3  0.000000  0.000000 -1.000000       46.30500            
REMARK 290   SMTRY1   4  1.000000  0.000000  0.000000       28.90500            
REMARK 290   SMTRY2   4  0.000000 -1.000000  0.000000       43.64500            
REMARK 290   SMTRY3   4  0.000000  0.000000 -1.000000        0.00000            
REMARK 290                                                                      
REMARK 290 REMARK: NULL                                                         
REMARK 300                                                                      
REMARK 300 BIOMOLECULE: 1                                                       
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM                
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN                  
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON               
REMARK 300 BURIED SURFACE AREA.                                                 
REMARK 350                                                                      
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN           
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE                
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS          
REMARK 350 GIVEN BELOW.  BOTH NON-CRYSTALLOGRAPHIC AND                          
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.                               
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 1                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC                           
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC                    
REMARK 350 SOFTWARE USED: PISA                                                  
REMARK 350 TOTAL BURIED SURFACE AREA: 1960 ANGSTROM**2                          
REMARK 350 SURFACE AREA OF THE COMPLEX: 17770 ANGSTROM**2                       
REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 6.0 KCAL/MOL                          
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B                                  
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 465                                                                      
REMARK 465 MISSING RESIDUES                                                     
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE                       
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)                
REMARK 465                                                                      
REMARK 465   M RES C SSSEQI                                                     
REMARK 465     ASP A    74                                                      
REMARK 465     GLY A   191                                                      
REMARK 465     THR A   192                                                      
REMARK 465     ALA A   193                                                      
REMARK 465     HIS A   194                                                      
REMARK 465     VAL A   195                                                      
REMARK 465     GLY A   196                                                      
REMARK 465     GLU A   197                                                      
REMARK 465     GLU A   370                                                      
REMARK 465     LEU A   371                                                      
REMARK 465     GLY A   372                                                      
REMARK 465     SER A   373                                                      
REMARK 465     TRP A   374                                                      
REMARK 465     GLY A   452                                                      
REMARK 465     SER A   453                                                      
REMARK 465     SER A   454                                                      
REMARK 465     GLU A   455                                                      
REMARK 465     GLU A   456                                                      
REMARK 465     SER A   457                                                      
REMARK 465     HIS A   458                                                      
REMARK 465     SER A   459                                                      
REMARK 465     SER A   460                                                      
REMARK 465     VAL A   461                                                      
REMARK 465     ASP A   462                                                      
REMARK 465     LYS A   463                                                      
REMARK 465     LEU A   464                                                      
REMARK 465     ALA A   465                                                      
REMARK 465     ALA A   466                                                      
REMARK 465     ALA A   467                                                      
REMARK 465     LEU A   468                                                      
REMARK 465     GLU A   469                                                      
REMARK 465     HIS A   470                                                      
REMARK 465     HIS A   471                                                      
REMARK 465     HIS A   472                                                      
REMARK 465     HIS A   473                                                      
REMARK 465     HIS A   474                                                      
REMARK 465     HIS A   475                                                      
REMARK 470                                                                      
REMARK 470 MISSING ATOM                                                         
REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER;           
REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER;          
REMARK 470 I=INSERTION CODE):                                                   
REMARK 470   M RES CSSEQI  ATOMS                                                
REMARK 470     ARG A  48    CG   CD   NE   CZ   NH1  NH2                        
REMARK 470     ARG A  83    CD   NE   CZ   NH1  NH2                             
REMARK 470     ARG A 138    CG   CD   NE   CZ   NH1  NH2                        
REMARK 470     LYS A 203    CG   CD   CE   NZ                                   
REMARK 470     GLN A 260    CG   CD   OE1  NE2                                  
REMARK 470     ARG A 270    CG   CD   NE   CZ   NH1  NH2                        
REMARK 470     LYS A 321    CD   CE   NZ                                        
REMARK 470     ARG A 412    CD   NE   CZ   NH1  NH2                             
REMARK 470     ASP A 428    CG   OD1  OD2                                       
REMARK 470     ARG A 439    CG   CD   NE   CZ   NH1  NH2                        
REMARK 470     LYS A 445    CD   CE   NZ                                        
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS                                      
REMARK 500                                                                      
REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES              
REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE               
REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                 
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3)               
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999                        
REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996                     
REMARK 500                                                                      
REMARK 500  M RES CSSEQI ATM1   RES CSSEQI ATM2   DEVIATION                     
REMARK 500    THR A 114   C     THR A 115   N      -0.140                       
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: COVALENT BOND ANGLES                                       
REMARK 500                                                                      
REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES              
REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE               
REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                 
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1)              
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999                        
REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996                     
REMARK 500                                                                      
REMARK 500  M RES CSSEQI ATM1   ATM2   ATM3                                     
REMARK 500    LEU A   2   CA  -  CB  -  CG  ANGL. DEV. = -16.6 DEGREES          
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: TORSION ANGLES                                             
REMARK 500                                                                      
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:            
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)                    
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-           
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400            
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        PSI       PHI                                   
REMARK 500    ALA A  34       71.75   -150.04                                   
REMARK 500    SER A 110     -163.51    -72.37                                   
REMARK 500    ASN A 143     -168.49   -101.97                                   
REMARK 500    ASN A 189      167.72    176.26                                   
REMARK 500    ALA A 342      143.76   -172.56                                   
REMARK 500    THR A 430      -13.15     84.88                                   
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 900                                                                      
REMARK 900 RELATED ENTRIES                                                      
REMARK 900 RELATED ID: 4CVL   RELATED DB: PDB                                   
REMARK 900 PAMURF IN COMPLEX WITH AMP-PNP                                       
REMARK 900 RELATED ID: 4CVM   RELATED DB: PDB                                   
REMARK 900 PAMURF IN COMPLEX WITH AMP-PNP AND UDP-MURNAC- TRIPEPTIDE (MDAP)     
REMARK 999                                                                      
REMARK 999 SEQUENCE                                                             
REMARK 999 CONTAINS A C-TERM HIS TAG                                            
DBREF  4CVK A    1   458  UNP    Q9HVZ7   Q9HVZ7_PSEAE     1    458             
DBREF  4CVK B 1454  1456  PDB    4CVK     4CVK          1454   1456             
SEQADV 4CVK GLU A   39  UNP  Q9HVZ7    GLN    39 CONFLICT                       
SEQADV 4CVK ASP A  428  UNP  Q9HVZ7    GLN   428 CONFLICT                       
SEQADV 4CVK SER A  459  UNP  Q9HVZ7              EXPRESSION TAG                 
SEQADV 4CVK SER A  460  UNP  Q9HVZ7              EXPRESSION TAG                 
SEQADV 4CVK VAL A  461  UNP  Q9HVZ7              EXPRESSION TAG                 
SEQADV 4CVK ASP A  462  UNP  Q9HVZ7              EXPRESSION TAG                 
SEQADV 4CVK LYS A  463  UNP  Q9HVZ7              EXPRESSION TAG                 
SEQADV 4CVK LEU A  464  UNP  Q9HVZ7              EXPRESSION TAG                 
SEQADV 4CVK ALA A  465  UNP  Q9HVZ7              EXPRESSION TAG                 
SEQADV 4CVK ALA A  466  UNP  Q9HVZ7              EXPRESSION TAG                 
SEQADV 4CVK ALA A  467  UNP  Q9HVZ7              EXPRESSION TAG                 
SEQADV 4CVK LEU A  468  UNP  Q9HVZ7              EXPRESSION TAG                 
SEQADV 4CVK GLU A  469  UNP  Q9HVZ7              EXPRESSION TAG                 
SEQADV 4CVK HIS A  470  UNP  Q9HVZ7              EXPRESSION TAG                 
SEQADV 4CVK HIS A  471  UNP  Q9HVZ7              EXPRESSION TAG                 
SEQADV 4CVK HIS A  472  UNP  Q9HVZ7              EXPRESSION TAG                 
SEQADV 4CVK HIS A  473  UNP  Q9HVZ7              EXPRESSION TAG                 
SEQADV 4CVK HIS A  474  UNP  Q9HVZ7              EXPRESSION TAG                 
SEQADV 4CVK HIS A  475  UNP  Q9HVZ7              EXPRESSION TAG                 
SEQRES   1 A  475  MET LEU GLU PRO LEU ARG LEU SER GLN LEU THR VAL ALA          
SEQRES   2 A  475  LEU ASP ALA ARG LEU ILE GLY GLU ASP ALA VAL PHE SER          
SEQRES   3 A  475  ALA VAL SER THR ASP SER ARG ALA ILE GLY PRO GLY GLU          
SEQRES   4 A  475  LEU PHE ILE ALA LEU SER GLY PRO ARG PHE ASP GLY HIS          
SEQRES   5 A  475  ASP TYR LEU ALA GLU VAL ALA ALA LYS GLY ALA VAL ALA          
SEQRES   6 A  475  ALA LEU VAL GLU ARG GLU VAL ALA ASP ALA PRO LEU PRO          
SEQRES   7 A  475  GLN LEU LEU VAL ARG ASP THR ARG ALA ALA LEU GLY ARG          
SEQRES   8 A  475  LEU GLY ALA LEU ASN ARG ARG LYS PHE THR GLY PRO LEU          
SEQRES   9 A  475  ALA ALA MET THR GLY SER SER GLY LYS THR THR VAL LYS          
SEQRES  10 A  475  GLU MET LEU ALA SER ILE LEU ARG THR GLN ALA GLY ASP          
SEQRES  11 A  475  ALA GLU SER VAL LEU ALA THR ARG GLY ASN LEU ASN ASN          
SEQRES  12 A  475  ASP LEU GLY VAL PRO LEU THR LEU LEU GLN LEU ALA PRO          
SEQRES  13 A  475  GLN HIS ARG SER ALA VAL ILE GLU LEU GLY ALA SER ARG          
SEQRES  14 A  475  ILE GLY GLU ILE ALA TYR THR VAL GLU LEU THR ARG PRO          
SEQRES  15 A  475  HIS VAL ALA ILE ILE THR ASN ALA GLY THR ALA HIS VAL          
SEQRES  16 A  475  GLY GLU PHE GLY GLY PRO GLU LYS ILE VAL GLU ALA LYS          
SEQRES  17 A  475  GLY GLU ILE LEU GLU GLY LEU ALA ALA ASP GLY THR ALA          
SEQRES  18 A  475  VAL LEU ASN LEU ASP ASP LYS ALA PHE ASP THR TRP LYS          
SEQRES  19 A  475  ALA ARG ALA SER GLY ARG PRO LEU LEU THR PHE SER LEU          
SEQRES  20 A  475  ASP ARG PRO GLN ALA ASP PHE ARG ALA ALA ASP LEU GLN          
SEQRES  21 A  475  ARG ASP ALA ARG GLY CYS MET GLY PHE ARG LEU GLN GLY          
SEQRES  22 A  475  VAL ALA GLY GLU ALA GLN VAL GLN LEU ASN LEU LEU GLY          
SEQRES  23 A  475  ARG HIS ASN VAL ALA ASN ALA LEU ALA ALA ALA ALA ALA          
SEQRES  24 A  475  ALA HIS ALA LEU GLY VAL PRO LEU ASP GLY ILE VAL ALA          
SEQRES  25 A  475  GLY LEU GLN ALA LEU GLN PRO VAL LYS GLY ARG ALA VAL          
SEQRES  26 A  475  ALA GLN LEU THR ALA SER GLY LEU ARG VAL ILE ASP ASP          
SEQRES  27 A  475  SER TYR ASN ALA ASN PRO ALA SER MET LEU ALA ALA ILE          
SEQRES  28 A  475  ASP ILE LEU SER GLY PHE SER GLY ARG THR VAL LEU VAL          
SEQRES  29 A  475  LEU GLY ASP MET GLY GLU LEU GLY SER TRP ALA GLU GLN          
SEQRES  30 A  475  ALA HIS ARG GLU VAL GLY ALA TYR ALA ALA GLY LYS VAL          
SEQRES  31 A  475  SER ALA LEU TYR ALA VAL GLY PRO LEU MET ALA HIS ALA          
SEQRES  32 A  475  VAL GLN ALA PHE GLY ALA THR GLY ARG HIS PHE ALA ASP          
SEQRES  33 A  475  GLN ALA SER LEU ILE GLY ALA LEU ALA THR GLU ASP PRO          
SEQRES  34 A  475  THR THR THR ILE LEU ILE LYS GLY SER ARG SER ALA ALA          
SEQRES  35 A  475  MET ASP LYS VAL VAL ALA ALA LEU CYS GLY SER SER GLU          
SEQRES  36 A  475  GLU SER HIS SER SER VAL ASP LYS LEU ALA ALA ALA LEU          
SEQRES  37 A  475  GLU HIS HIS HIS HIS HIS HIS                                  
SEQRES   1 B    3  ALA FGA API                                                  
HET    FGA  B1455       9                                                       
HET    API  B1456      13                                                       
HET    UDP  A1452      24                                                       
HET    MUB  A1453      19                                                       
HETNAM     FGA GAMMA-D-GLUTAMIC ACID                                            
HETNAM     API 2,6-DIAMINOPIMELIC ACID                                          
HETNAM     UDP URIDINE-5'-DIPHOSPHATE                                           
HETNAM     MUB N-ACETYL-ALPHA-MURAMIC ACID                                      
HETSYN     FGA D-GLUTAMIC ACID                                                  
HETSYN     MUB N-ACETYL-MURAMIC ACID; N-ACETYLMURAMIC ACID                      
FORMUL   2  FGA    C5 H9 N O4                                                   
FORMUL   2  API    C7 H14 N2 O4                                                 
FORMUL   3  UDP    C9 H14 N2 O12 P2                                             
FORMUL   4  MUB    C11 H19 N O8                                                 
FORMUL   5  HOH   *84(H2 O)                                                     
HELIX    1   1 LEU A   10  ASP A   15  1                                   6    
HELIX    2   2 GLY A   51  ASP A   53  5                                   3    
HELIX    3   3 TYR A   54  LYS A   61  1                                   8    
HELIX    4   4 ASP A   84  PHE A  100  1                                  17    
HELIX    5   5 SER A  111  GLY A  129  1                                  19    
HELIX    6   6 ASP A  130  GLU A  132  5                                   3    
HELIX    7   7 LEU A  145  GLN A  153  1                                   9    
HELIX    8   8 GLY A  171  ARG A  181  1                                  11    
HELIX    9   9 GLY A  200  GLU A  210  1                                  11    
HELIX   10  10 ILE A  211  LEU A  215  5                                   5    
HELIX   11  11 ALA A  229  ALA A  237  1                                   9    
HELIX   12  12 GLY A  286  LEU A  303  1                                  18    
HELIX   13  13 PRO A  306  LEU A  317  1                                  12    
HELIX   14  14 ASN A  343  GLY A  356  1                                  14    
HELIX   15  15 ALA A  375  ALA A  387  1                                  13    
HELIX   16  16 LEU A  399  GLY A  408  1                                  10    
HELIX   17  17 ASP A  416  ALA A  425  1                                  10    
HELIX   18  18 SER A  438  ALA A  442  5                                   5    
HELIX   19  19 MET A  443  CYS A  451  1                                   9    
SHEET    1  AA 2 LEU A   5  ARG A   6  0                                        
SHEET    2  AA 2 VAL A  24  PHE A  25 -1  O  PHE A  25   N  LEU A   5           
SHEET    1  AB 5 ARG A  17  ILE A  19  0                                        
SHEET    2  AB 5 GLN A  79  LEU A  81 -1  O  GLN A  79   N  ILE A  19           
SHEET    3  AB 5 ALA A  65  VAL A  68  1  O  ALA A  66   N  LEU A  80           
SHEET    4  AB 5 GLU A  39  ILE A  42  1  O  PHE A  41   N  LEU A  67           
SHEET    5  AB 5 ALA A  27  SER A  29  1  O  ALA A  27   N  LEU A  40           
SHEET    1  AC 9 VAL A 134  ALA A 136  0                                        
SHEET    2  AC 9 SER A 160  GLU A 164  1  O  SER A 160   N  LEU A 135           
SHEET    3  AC 9 LEU A 104  THR A 108  1  O  ALA A 105   N  ILE A 163           
SHEET    4  AC 9 VAL A 184  ILE A 187  1  O  VAL A 184   N  ALA A 106           
SHEET    5  AC 9 THR A 220  ASN A 224  1  O  THR A 220   N  ALA A 185           
SHEET    6  AC 9 LEU A 242  SER A 246  1  O  LEU A 243   N  LEU A 223           
SHEET    7  AC 9 PHE A 254  ARG A 261  1  O  PHE A 254   N  SER A 246           
SHEET    8  AC 9 MET A 267  GLY A 273 -1  O  GLY A 268   N  GLN A 260           
SHEET    9  AC 9 ALA A 278  GLN A 281 -1  O  ALA A 278   N  LEU A 271           
SHEET    1  AD 6 VAL A 325  LEU A 328  0                                        
SHEET    2  AD 6 ARG A 334  ASP A 338 -1  O  VAL A 335   N  GLN A 327           
SHEET    3  AD 6 THR A 432  LYS A 436  1  O  ILE A 433   N  ILE A 336           
SHEET    4  AD 6 THR A 361  GLY A 366  1  O  VAL A 362   N  LEU A 434           
SHEET    5  AD 6 ALA A 392  VAL A 396  1  O  ALA A 392   N  LEU A 363           
SHEET    6  AD 6 ARG A 412  PHE A 414  1  O  ARG A 412   N  ALA A 395           
LINK         PB  UDP A1452                 O1  MUB A1453     1555   1555  1.62  
LINK         C10 MUB A1453                 N   ALA B1454     1555   1555  1.32  
LINK         C   ALA B1454                 N   FGA B1455     1555   1555  1.37  
LINK         CD  FGA B1455                 N   API B1456     1555   1555  1.36  
CRYST1   57.810   87.290   92.610  90.00  90.00  90.00 P 21 21 21    4          
ORIGX1      1.000000  0.000000  0.000000        0.00000                         
ORIGX2      0.000000  1.000000  0.000000        0.00000                         
ORIGX3      0.000000  0.000000  1.000000        0.00000                         
SCALE1      0.017298  0.000000  0.000000        0.00000                         
SCALE2      0.000000  0.011456  0.000000        0.00000                         
SCALE3      0.000000  0.000000  0.010798        0.00000