data_4CXB # _entry.id 4CXB # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.280 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 4CXB PDBE EBI-60174 WWPDB D_1290060174 # _pdbx_database_PDB_obs_spr.id OBSLTE _pdbx_database_PDB_obs_spr.date 2014-12-10 _pdbx_database_PDB_obs_spr.pdb_id 4UJE _pdbx_database_PDB_obs_spr.replace_pdb_id 4CXB _pdbx_database_PDB_obs_spr.details ;THIS ENTRY WITH OTHER SPLIT ENTRIES HAVE BEEN CONSOLIDATED INTO A COMBINED FILE FOR COMPLETE REPRESENTATION. NO COORDINATES HAVE BEEN CHANGED. ; # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.content_type _pdbx_database_related.details PDB 4CXB split . PDB 4CXC split 'REGULATION OF THE MAMMALIAN ELONGATION CYCLE BY 40S SUBUNIT ROLLING: A EUKARYOTIC-SPECIFIC RIBOSOME REARRANGEMENT' PDB 4CXD split 'REGULATION OF THE MAMMALIAN ELONGATION CYCLE BY 40S SUBUNIT ROLLING: A EUKARYOTIC-SPECIFIC RIBOSOME REARRANGEMENT' PDB 4CXE split 'REGULATION OF THE MAMMALIAN ELONGATION CYCLE BY 40S SUBUNIT ROLLING: A EUKARYOTIC-SPECIFIC RIBOSOME REARRANGEMENT' EMDB EMD-2620 'associated EM volume' . PDB 4CXG unspecified 'REGULATION OF THE MAMMALIAN ELONGATION CYCLE BY 40S SUBUNIT ROLLING: A EUKARYOTIC-SPECIFIC RIBOSOME REARRANGEMENT' PDB 4CXH unspecified 'REGULATION OF THE MAMMALIAN ELONGATION CYCLE BY 40S SUBUNIT ROLLING: A EUKARYOTIC-SPECIFIC RIBOSOME REARRANGEMENT' # _pdbx_database_status.status_code OBS _pdbx_database_status.entry_id 4CXB _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2014-04-05 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Budkevich, T.V.' 1 'Giesebrecht, J.' 2 'Behrmann, E.' 3 'Loerke, J.' 4 'Ramrath, D.J.F.' 5 'Mielke, T.' 6 'Ismer, J.' 7 'Hildebrand, P.' 8 'Tung, C.-S.' 9 'Nierhaus, K.H.' 10 'Sanbonmatsu, K.Y.' 11 'Spahn, C.M.T.' 12 # _citation.id primary _citation.title 'Regulation of the Mammalian Elongation Cycle by Subunit Rolling: A Eukaryotic-Specific Ribosome Rearrangement.' _citation.journal_abbrev 'Cell(Cambridge,Mass.)' _citation.journal_volume 158 _citation.page_first 121 _citation.page_last ? _citation.year 2014 _citation.journal_id_ASTM CELLB5 _citation.country US _citation.journal_id_ISSN 0092-8674 _citation.journal_id_CSD 0998 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 24995983 _citation.pdbx_database_id_DOI 10.1016/J.CELL.2014.04.044 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Budkevich, T.V.' 1 primary 'Giesebrecht, J.' 2 primary 'Behrmann, E.' 3 primary 'Loerke, J.' 4 primary 'Ramrath, D.J.' 5 primary 'Mielke, T.' 6 primary 'Ismer, J.' 7 primary 'Hildebrand, P.W.' 8 primary 'Tung, C.S.' 9 primary 'Nierhaus, K.H.' 10 primary 'Sanbonmatsu, K.Y.' 11 primary 'Spahn, C.M.' 12 # _cell.entry_id 4CXB _cell.length_a 1.000 _cell.length_b 1.000 _cell.length_c 1.000 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4CXB _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer nat TRNA-LYS 24485.539 1 ? ? ? 'FOR MODELING E.COLI TRNAPHE (CHAIN C, PDB ID CODE 3I8G) WAS USED.' 2 polymer nat TRNA-PHE 24601.764 1 ? ? ? 'FOR MODELING E.COLI TRNAPHE (CHAIN D, PDB ID CODE 3I8G) WAS USED.' 3 polymer man 'MESSENGER RNA' 8527.686 1 ? ? ? 'FOR MODELING MRNA (CHAIN 1, PDB ID CODE 3I8G) WAS USED.' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polyribonucleotide no no GCCCGGAUAGCUCAGUCGGUAGAGCAGGGGAUUGAAAAUCCCCGUGUCCUUGGUUCGAUUCCGAGUCCGGGCACCA GCCCGGAUAGCUCAGUCGGUAGAGCAGGGGAUUGAAAAUCCCCGUGUCCUUGGUUCGAUUCCGAGUCCGGGCACCA V ? 2 polyribonucleotide no yes 'GCCCGGAUAGCUCAGUCGGUAGAGCAGGGGAUUGAA(MIA)AUCCCCGUGUCCUUGGUUCGAUUCCGAGUCCGGGCACCA' GCCCGGAUAGCUCAGUCGGUAGAGCAGGGGAUUGAAAAUCCCCGUGUCCUUGGUUCGAUUCCGAGUCCGGGCACCA W ? 3 polyribonucleotide no no UUUUUUUUUUUUUUUUUUUUUUUUUUUU UUUUUUUUUUUUUUUUUUUUUUUUUUUU X ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 G n 1 2 C n 1 3 C n 1 4 C n 1 5 G n 1 6 G n 1 7 A n 1 8 U n 1 9 A n 1 10 G n 1 11 C n 1 12 U n 1 13 C n 1 14 A n 1 15 G n 1 16 U n 1 17 C n 1 18 G n 1 19 G n 1 20 U n 1 21 A n 1 22 G n 1 23 A n 1 24 G n 1 25 C n 1 26 A n 1 27 G n 1 28 G n 1 29 G n 1 30 G n 1 31 A n 1 32 U n 1 33 U n 1 34 G n 1 35 A n 1 36 A n 1 37 A n 1 38 A n 1 39 U n 1 40 C n 1 41 C n 1 42 C n 1 43 C n 1 44 G n 1 45 U n 1 46 G n 1 47 U n 1 48 C n 1 49 C n 1 50 U n 1 51 U n 1 52 G n 1 53 G n 1 54 U n 1 55 U n 1 56 C n 1 57 G n 1 58 A n 1 59 U n 1 60 U n 1 61 C n 1 62 C n 1 63 G n 1 64 A n 1 65 G n 1 66 U n 1 67 C n 1 68 C n 1 69 G n 1 70 G n 1 71 G n 1 72 C n 1 73 A n 1 74 C n 1 75 C n 1 76 A n 2 1 G n 2 2 C n 2 3 C n 2 4 C n 2 5 G n 2 6 G n 2 7 A n 2 8 U n 2 9 A n 2 10 G n 2 11 C n 2 12 U n 2 13 C n 2 14 A n 2 15 G n 2 16 U n 2 17 C n 2 18 G n 2 19 G n 2 20 U n 2 21 A n 2 22 G n 2 23 A n 2 24 G n 2 25 C n 2 26 A n 2 27 G n 2 28 G n 2 29 G n 2 30 G n 2 31 A n 2 32 U n 2 33 U n 2 34 G n 2 35 A n 2 36 A n 2 37 MIA n 2 38 A n 2 39 U n 2 40 C n 2 41 C n 2 42 C n 2 43 C n 2 44 G n 2 45 U n 2 46 G n 2 47 U n 2 48 C n 2 49 C n 2 50 U n 2 51 U n 2 52 G n 2 53 G n 2 54 U n 2 55 U n 2 56 C n 2 57 G n 2 58 A n 2 59 U n 2 60 U n 2 61 C n 2 62 C n 2 63 G n 2 64 A n 2 65 G n 2 66 U n 2 67 C n 2 68 C n 2 69 G n 2 70 G n 2 71 G n 2 72 C n 2 73 A n 2 74 C n 2 75 C n 2 76 A n 3 1 U n 3 2 U n 3 3 U n 3 4 U n 3 5 U n 3 6 U n 3 7 U n 3 8 U n 3 9 U n 3 10 U n 3 11 U n 3 12 U n 3 13 U n 3 14 U n 3 15 U n 3 16 U n 3 17 U n 3 18 U n 3 19 U n 3 20 U n 3 21 U n 3 22 U n 3 23 U n 3 24 U n 3 25 U n 3 26 U n 3 27 U n 3 28 U n # _entity_src_gen.entity_id 3 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'ESCHERICHIA COLI' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 562 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'ESCHERICHIA COLI' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _entity_src_nat.entity_id _entity_src_nat.pdbx_src_id _entity_src_nat.pdbx_alt_source_flag _entity_src_nat.pdbx_beg_seq_num _entity_src_nat.pdbx_end_seq_num _entity_src_nat.common_name _entity_src_nat.pdbx_organism_scientific _entity_src_nat.pdbx_ncbi_taxonomy_id _entity_src_nat.genus _entity_src_nat.species _entity_src_nat.strain _entity_src_nat.tissue _entity_src_nat.tissue_fraction _entity_src_nat.pdbx_secretion _entity_src_nat.pdbx_fragment _entity_src_nat.pdbx_variant _entity_src_nat.pdbx_cell_line _entity_src_nat.pdbx_atcc _entity_src_nat.pdbx_cellular_location _entity_src_nat.pdbx_organ _entity_src_nat.pdbx_organelle _entity_src_nat.pdbx_cell _entity_src_nat.pdbx_plasmid_name _entity_src_nat.pdbx_plasmid_details _entity_src_nat.details 1 1 sample ? ? RABBIT 'ORYCTOLAGUS CUNICULUS' 9986 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 2 1 sample ? ? CATTLE 'BOS TAURUS' 9913 ? ? ? ? ? ? ? ? ? ? ? LIVER ? ? ? ? ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform 1 PDB 4CXB 1 ? ? 4CXB ? 2 PDB 4CXB 2 ? ? 4CXB ? 3 PDB 4CXB 3 ? ? 4CXB ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4CXB V 1 ? 76 ? 4CXB 1 ? 76 ? 1 76 2 2 4CXB W 1 ? 76 ? 4CXB 1 ? 76 ? 1 76 3 3 4CXB X 1 ? 28 ? 4CXB 34 ? 61 ? 34 61 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 MIA 'RNA linking' n "2-METHYLTHIO-N6-ISOPENTENYL-ADENOSINE-5'-MONOPHOSPHATE" ? 'C16 H26 N5 O7 P S' 463.446 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 # _exptl.entry_id 4CXB _exptl.method 'ELECTRON MICROSCOPY' _exptl.crystals_number ? # _refine.pdbx_refine_id 'ELECTRON MICROSCOPY' _refine.entry_id 4CXB _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs ? _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low ? _refine.ls_d_res_high 6.90 _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_obs ? _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work ? _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'ELECTRON MICROSCOPY' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 3805 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 3805 _refine_hist.d_res_high 6.90 _refine_hist.d_res_low . # _struct.entry_id 4CXB _struct.title 'Regulation of the mammalian elongation cycle by 40S subunit rolling: a eukaryotic-specific ribosome rearrangement' _struct.pdbx_descriptor 76-MER _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4CXB _struct_keywords.pdbx_keywords RIBOSOME _struct_keywords.text 'RIBOSOME, TRANSLATION, MAMMALIAN 80S RIBOSOME, ELONGATION CYCLE, POST-TRANSLOCATIONAL STATE, TRNA SELECTION' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # _struct_biol.id 1 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale ? ? B A 36 "O3'" ? ? ? 1_555 B MIA 37 P ? ? W A 36 W MIA 37 1_555 ? ? ? ? ? ? ? 1.521 ? covale2 covale ? ? B MIA 37 "O3'" ? ? ? 1_555 B A 38 P ? ? W MIA 37 W A 38 1_555 ? ? ? ? ? ? ? 1.639 ? hydrog1 hydrog ? ? A G 1 N1 ? ? ? 1_555 A C 72 N3 ? ? V G 1 V C 72 1_555 ? ? ? ? ? ? 'G-C PAIR' ? ? hydrog2 hydrog ? ? A C 2 N3 ? ? ? 1_555 A G 71 N1 ? ? V C 2 V G 71 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog3 hydrog ? ? A C 2 N4 ? ? ? 1_555 A G 71 O6 ? ? V C 2 V G 71 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog4 hydrog ? ? A C 2 O2 ? ? ? 1_555 A G 71 N2 ? ? V C 2 V G 71 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog5 hydrog ? ? A C 4 N3 ? ? ? 1_555 A G 69 N1 ? ? V C 4 V G 69 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog6 hydrog ? ? A C 4 N4 ? ? ? 1_555 A G 69 O6 ? ? V C 4 V G 69 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog7 hydrog ? ? A C 4 O2 ? ? ? 1_555 A G 69 N2 ? ? V C 4 V G 69 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog8 hydrog ? ? A G 5 N2 ? ? ? 1_555 A C 68 O2 ? ? V G 5 V C 68 1_555 ? ? ? ? ? ? 'G-C PAIR' ? ? hydrog9 hydrog ? ? A G 6 N1 ? ? ? 1_555 A C 67 O2 ? ? V G 6 V C 67 1_555 ? ? ? ? ? ? 'G-C PAIR' ? ? hydrog10 hydrog ? ? A A 7 N6 ? ? ? 1_555 A U 66 O4 ? ? V A 7 V U 66 1_555 ? ? ? ? ? ? 'A-U PAIR' ? ? hydrog11 hydrog ? ? A U 8 N3 ? ? ? 1_555 A A 14 N7 ? ? V U 8 V A 14 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? hydrog12 hydrog ? ? A U 8 O2 ? ? ? 1_555 A A 14 N6 ? ? V U 8 V A 14 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? hydrog13 hydrog ? ? A A 9 N6 ? ? ? 1_555 A A 23 N7 ? ? V A 9 V A 23 1_555 ? ? ? ? ? ? 'A-A MISPAIR' ? ? hydrog14 hydrog ? ? A G 10 N1 ? ? ? 1_555 A C 25 O2 ? ? V G 10 V C 25 1_555 ? ? ? ? ? ? 'G-C PAIR' ? ? hydrog15 hydrog ? ? A C 11 N3 ? ? ? 1_555 A G 24 N1 ? ? V C 11 V G 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog16 hydrog ? ? A C 11 N4 ? ? ? 1_555 A G 24 O6 ? ? V C 11 V G 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog17 hydrog ? ? A C 11 O2 ? ? ? 1_555 A G 24 N2 ? ? V C 11 V G 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog18 hydrog ? ? A U 12 O4 ? ? ? 1_555 A A 23 N6 ? ? V U 12 V A 23 1_555 ? ? ? ? ? ? 'U-A PAIR' ? ? hydrog19 hydrog ? ? A C 13 N4 ? ? ? 1_555 A G 22 O6 ? ? V C 13 V G 22 1_555 ? ? ? ? ? ? 'C-G PAIR' ? ? hydrog20 hydrog ? ? A G 15 N1 ? ? ? 1_555 A C 48 O2 ? ? V G 15 V C 48 1_555 ? ? ? ? ? ? 'REVERSED WATSON-CRICK' ? ? hydrog21 hydrog ? ? A G 15 N2 ? ? ? 1_555 A C 48 N3 ? ? V G 15 V C 48 1_555 ? ? ? ? ? ? 'REVERSED WATSON-CRICK' ? ? hydrog22 hydrog ? ? A U 16 N3 ? ? ? 1_555 A U 59 O2 ? ? V U 16 V U 59 1_555 ? ? ? ? ? ? TYPE_13_PAIR ? ? hydrog23 hydrog ? ? A U 16 O2 ? ? ? 1_555 A U 59 N3 ? ? V U 16 V U 59 1_555 ? ? ? ? ? ? TYPE_13_PAIR ? ? hydrog24 hydrog ? ? A G 18 N1 ? ? ? 1_555 A U 55 O2 ? ? V G 18 V U 55 1_555 ? ? ? ? ? ? 'G-U MISPAIR' ? ? hydrog25 hydrog ? ? A G 22 N7 ? ? ? 1_555 A G 46 N1 ? ? V G 22 V G 46 1_555 ? ? ? ? ? ? 'G-G MISPAIR' ? ? hydrog26 hydrog ? ? A A 26 N1 ? ? ? 1_555 A G 44 N1 ? ? V A 26 V G 44 1_555 ? ? ? ? ? ? TYPE_8_PAIR ? ? hydrog27 hydrog ? ? A A 26 N6 ? ? ? 1_555 A G 44 O6 ? ? V A 26 V G 44 1_555 ? ? ? ? ? ? TYPE_8_PAIR ? ? hydrog28 hydrog ? ? A G 27 N1 ? ? ? 1_555 A C 43 N3 ? ? V G 27 V C 43 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog29 hydrog ? ? A G 27 N2 ? ? ? 1_555 A C 43 O2 ? ? V G 27 V C 43 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog30 hydrog ? ? A G 27 O6 ? ? ? 1_555 A C 43 N4 ? ? V G 27 V C 43 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog31 hydrog ? ? A G 28 N1 ? ? ? 1_555 A C 42 N3 ? ? V G 28 V C 42 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog32 hydrog ? ? A G 28 N2 ? ? ? 1_555 A C 42 O2 ? ? V G 28 V C 42 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog33 hydrog ? ? A G 28 O6 ? ? ? 1_555 A C 42 N4 ? ? V G 28 V C 42 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog34 hydrog ? ? A G 29 N2 ? ? ? 1_555 A C 41 N3 ? ? V G 29 V C 41 1_555 ? ? ? ? ? ? 'G-C PAIR' ? ? hydrog35 hydrog ? ? A G 30 N1 ? ? ? 1_555 A C 40 N3 ? ? V G 30 V C 40 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog36 hydrog ? ? A G 30 N2 ? ? ? 1_555 A C 40 O2 ? ? V G 30 V C 40 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog37 hydrog ? ? A G 30 O6 ? ? ? 1_555 A C 40 N4 ? ? V G 30 V C 40 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog38 hydrog ? ? A A 31 N1 ? ? ? 1_555 A U 39 N3 ? ? V A 31 V U 39 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog39 hydrog ? ? A A 31 N6 ? ? ? 1_555 A U 39 O4 ? ? V A 31 V U 39 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog40 hydrog ? ? A U 32 O2 ? ? ? 1_555 A A 38 N6 ? ? V U 32 V A 38 1_555 ? ? ? ? ? ? 'U-A PAIR' ? ? hydrog41 hydrog ? ? A C 49 N3 ? ? ? 1_555 A G 65 N1 ? ? V C 49 V G 65 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog42 hydrog ? ? A C 49 N4 ? ? ? 1_555 A G 65 O6 ? ? V C 49 V G 65 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog43 hydrog ? ? A C 49 O2 ? ? ? 1_555 A G 65 N2 ? ? V C 49 V G 65 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog44 hydrog ? ? A U 50 N3 ? ? ? 1_555 A A 64 N1 ? ? V U 50 V A 64 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog45 hydrog ? ? A U 50 O4 ? ? ? 1_555 A A 64 N6 ? ? V U 50 V A 64 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog46 hydrog ? ? A U 51 O2 ? ? ? 1_555 A G 63 N1 ? ? V U 51 V G 63 1_555 ? ? ? ? ? ? 'U-G MISPAIR' ? ? hydrog47 hydrog ? ? A G 52 N1 ? ? ? 1_555 A C 62 N3 ? ? V G 52 V C 62 1_555 ? ? ? ? ? ? 'G-C PAIR' ? ? hydrog48 hydrog ? ? A G 53 N1 ? ? ? 1_555 A C 61 N3 ? ? V G 53 V C 61 1_555 ? ? ? ? ? ? 'G-C PAIR' ? ? hydrog49 hydrog ? ? A U 54 N3 ? ? ? 1_555 A A 58 N7 ? ? V U 54 V A 58 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? hydrog50 hydrog ? ? A U 54 O2 ? ? ? 1_555 A A 58 N6 ? ? V U 54 V A 58 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? hydrog51 hydrog ? ? B G 1 N1 ? ? ? 1_555 B C 72 N3 ? ? W G 1 W C 72 1_555 ? ? ? ? ? ? 'G-C PAIR' ? ? hydrog52 hydrog ? ? B C 2 N3 ? ? ? 1_555 B G 71 N1 ? ? W C 2 W G 71 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog53 hydrog ? ? B C 2 N4 ? ? ? 1_555 B G 71 O6 ? ? W C 2 W G 71 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog54 hydrog ? ? B C 2 O2 ? ? ? 1_555 B G 71 N2 ? ? W C 2 W G 71 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog55 hydrog ? ? B C 3 N3 ? ? ? 1_555 B G 70 N1 ? ? W C 3 W G 70 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog56 hydrog ? ? B C 3 N4 ? ? ? 1_555 B G 70 O6 ? ? W C 3 W G 70 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog57 hydrog ? ? B C 3 O2 ? ? ? 1_555 B G 70 N2 ? ? W C 3 W G 70 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog58 hydrog ? ? B C 4 O2 ? ? ? 1_555 B G 69 N2 ? ? W C 4 W G 69 1_555 ? ? ? ? ? ? 'C-G PAIR' ? ? hydrog59 hydrog ? ? B G 5 N1 ? ? ? 1_555 B C 68 N3 ? ? W G 5 W C 68 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog60 hydrog ? ? B G 5 N2 ? ? ? 1_555 B C 68 O2 ? ? W G 5 W C 68 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog61 hydrog ? ? B G 5 O6 ? ? ? 1_555 B C 68 N4 ? ? W G 5 W C 68 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog62 hydrog ? ? B G 6 N1 ? ? ? 1_555 B C 67 N3 ? ? W G 6 W C 67 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog63 hydrog ? ? B G 6 N2 ? ? ? 1_555 B C 67 O2 ? ? W G 6 W C 67 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog64 hydrog ? ? B G 6 O6 ? ? ? 1_555 B C 67 N4 ? ? W G 6 W C 67 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog65 hydrog ? ? B A 7 N1 ? ? ? 1_555 B U 66 N3 ? ? W A 7 W U 66 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog66 hydrog ? ? B A 7 N6 ? ? ? 1_555 B U 66 O4 ? ? W A 7 W U 66 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog67 hydrog ? ? B A 9 N7 ? ? ? 1_555 B C 11 N4 ? ? W A 9 W C 11 1_555 ? ? ? ? ? ? 'A-C MISPAIR' ? ? hydrog68 hydrog ? ? B A 9 N6 ? ? ? 1_555 B A 23 N7 ? ? W A 9 W A 23 1_555 ? ? ? ? ? ? 'A-A MISPAIR' ? ? hydrog69 hydrog ? ? B G 10 N1 ? ? ? 1_555 B C 25 N3 ? ? W G 10 W C 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog70 hydrog ? ? B G 10 N2 ? ? ? 1_555 B C 25 O2 ? ? W G 10 W C 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog71 hydrog ? ? B G 10 O6 ? ? ? 1_555 B C 25 N4 ? ? W G 10 W C 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog72 hydrog ? ? B C 11 N3 ? ? ? 1_555 B G 24 N1 ? ? W C 11 W G 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog73 hydrog ? ? B C 11 N4 ? ? ? 1_555 B G 24 O6 ? ? W C 11 W G 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog74 hydrog ? ? B C 11 O2 ? ? ? 1_555 B G 24 N2 ? ? W C 11 W G 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog75 hydrog ? ? B U 12 N3 ? ? ? 1_555 B A 23 N1 ? ? W U 12 W A 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog76 hydrog ? ? B U 12 O4 ? ? ? 1_555 B A 23 N6 ? ? W U 12 W A 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog77 hydrog ? ? B C 13 N3 ? ? ? 1_555 B G 22 N1 ? ? W C 13 W G 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog78 hydrog ? ? B C 13 N4 ? ? ? 1_555 B G 22 O6 ? ? W C 13 W G 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog79 hydrog ? ? B C 13 O2 ? ? ? 1_555 B G 22 N2 ? ? W C 13 W G 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog80 hydrog ? ? B G 15 O6 ? ? ? 1_555 B C 48 N4 ? ? W G 15 W C 48 1_555 ? ? ? ? ? ? 'G-C PAIR' ? ? hydrog81 hydrog ? ? B G 18 N2 ? ? ? 1_555 B U 55 O4 ? ? W G 18 W U 55 1_555 ? ? ? ? ? ? 'G-U MISPAIR' ? ? hydrog82 hydrog ? ? B A 21 N6 ? ? ? 1_555 B C 48 O2 ? ? W A 21 W C 48 1_555 ? ? ? ? ? ? 'A-C MISPAIR' ? ? hydrog83 hydrog ? ? B G 27 N1 ? ? ? 1_555 B C 43 N3 ? ? W G 27 W C 43 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog84 hydrog ? ? B G 27 N2 ? ? ? 1_555 B C 43 O2 ? ? W G 27 W C 43 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog85 hydrog ? ? B G 27 O6 ? ? ? 1_555 B C 43 N4 ? ? W G 27 W C 43 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog86 hydrog ? ? B G 28 N1 ? ? ? 1_555 B C 42 N3 ? ? W G 28 W C 42 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog87 hydrog ? ? B G 28 N2 ? ? ? 1_555 B C 42 O2 ? ? W G 28 W C 42 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog88 hydrog ? ? B G 28 O6 ? ? ? 1_555 B C 42 N4 ? ? W G 28 W C 42 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog89 hydrog ? ? B G 29 N1 ? ? ? 1_555 B C 41 N3 ? ? W G 29 W C 41 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog90 hydrog ? ? B G 29 N2 ? ? ? 1_555 B C 41 O2 ? ? W G 29 W C 41 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog91 hydrog ? ? B G 29 O6 ? ? ? 1_555 B C 41 N4 ? ? W G 29 W C 41 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog92 hydrog ? ? B G 30 N1 ? ? ? 1_555 B C 40 N3 ? ? W G 30 W C 40 1_555 ? ? ? ? ? ? 'G-C PAIR' ? ? hydrog93 hydrog ? ? B A 31 N1 ? ? ? 1_555 B U 39 N3 ? ? W A 31 W U 39 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog94 hydrog ? ? B A 31 N6 ? ? ? 1_555 B U 39 O4 ? ? W A 31 W U 39 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog95 hydrog ? ? B U 32 O2 ? ? ? 1_555 B A 38 N6 ? ? W U 32 W A 38 1_555 ? ? ? ? ? ? 'U-A PAIR' ? ? hydrog96 hydrog ? ? B G 46 N2 ? ? ? 1_555 B C 48 O2 ? ? W G 46 W C 48 1_555 ? ? ? ? ? ? 'G-C PAIR' ? ? hydrog97 hydrog ? ? B C 49 N3 ? ? ? 1_555 B G 65 N1 ? ? W C 49 W G 65 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog98 hydrog ? ? B C 49 N4 ? ? ? 1_555 B G 65 O6 ? ? W C 49 W G 65 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog99 hydrog ? ? B C 49 O2 ? ? ? 1_555 B G 65 N2 ? ? W C 49 W G 65 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog100 hydrog ? ? B U 50 N3 ? ? ? 1_555 B A 64 N1 ? ? W U 50 W A 64 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog101 hydrog ? ? B U 50 O4 ? ? ? 1_555 B A 64 N6 ? ? W U 50 W A 64 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog102 hydrog ? ? B U 51 N3 ? ? ? 1_555 B G 63 O6 ? ? W U 51 W G 63 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? hydrog103 hydrog ? ? B U 51 O2 ? ? ? 1_555 B G 63 N1 ? ? W U 51 W G 63 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? hydrog104 hydrog ? ? B G 52 N1 ? ? ? 1_555 B C 62 N3 ? ? W G 52 W C 62 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog105 hydrog ? ? B G 52 N2 ? ? ? 1_555 B C 62 O2 ? ? W G 52 W C 62 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog106 hydrog ? ? B G 52 O6 ? ? ? 1_555 B C 62 N4 ? ? W G 52 W C 62 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog107 hydrog ? ? B G 53 N1 ? ? ? 1_555 B C 61 N3 ? ? W G 53 W C 61 1_555 ? ? ? ? ? ? 'G-C PAIR' ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? hydrog ? ? # _database_PDB_matrix.entry_id 4CXB _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 4CXB _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 G 1 1 1 G G V . n A 1 2 C 2 2 2 C C V . n A 1 3 C 3 3 3 C C V . n A 1 4 C 4 4 4 C C V . n A 1 5 G 5 5 5 G G V . n A 1 6 G 6 6 6 G G V . n A 1 7 A 7 7 7 A A V . n A 1 8 U 8 8 8 U U V . n A 1 9 A 9 9 9 A A V . n A 1 10 G 10 10 10 G G V . n A 1 11 C 11 11 11 C C V . n A 1 12 U 12 12 12 U U V . n A 1 13 C 13 13 13 C C V . n A 1 14 A 14 14 14 A A V . n A 1 15 G 15 15 15 G G V . n A 1 16 U 16 16 16 U U V . n A 1 17 C 17 17 17 C C V . n A 1 18 G 18 18 18 G G V . n A 1 19 G 19 19 19 G G V . n A 1 20 U 20 20 20 U U V . n A 1 21 A 21 21 21 A A V . n A 1 22 G 22 22 22 G G V . n A 1 23 A 23 23 23 A A V . n A 1 24 G 24 24 24 G G V . n A 1 25 C 25 25 25 C C V . n A 1 26 A 26 26 26 A A V . n A 1 27 G 27 27 27 G G V . n A 1 28 G 28 28 28 G G V . n A 1 29 G 29 29 29 G G V . n A 1 30 G 30 30 30 G G V . n A 1 31 A 31 31 31 A A V . n A 1 32 U 32 32 32 U U V . n A 1 33 U 33 33 33 U U V . n A 1 34 G 34 34 34 G G V . n A 1 35 A 35 35 35 A A V . n A 1 36 A 36 36 36 A A V . n A 1 37 A 37 37 37 A A V . n A 1 38 A 38 38 38 A A V . n A 1 39 U 39 39 39 U U V . n A 1 40 C 40 40 40 C C V . n A 1 41 C 41 41 41 C C V . n A 1 42 C 42 42 42 C C V . n A 1 43 C 43 43 43 C C V . n A 1 44 G 44 44 44 G G V . n A 1 45 U 45 45 45 U U V . n A 1 46 G 46 46 46 G G V . n A 1 47 U 47 47 47 U U V . n A 1 48 C 48 48 48 C C V . n A 1 49 C 49 49 49 C C V . n A 1 50 U 50 50 50 U U V . n A 1 51 U 51 51 51 U U V . n A 1 52 G 52 52 52 G G V . n A 1 53 G 53 53 53 G G V . n A 1 54 U 54 54 54 U U V . n A 1 55 U 55 55 55 U U V . n A 1 56 C 56 56 56 C C V . n A 1 57 G 57 57 57 G G V . n A 1 58 A 58 58 58 A A V . n A 1 59 U 59 59 59 U U V . n A 1 60 U 60 60 60 U U V . n A 1 61 C 61 61 61 C C V . n A 1 62 C 62 62 62 C C V . n A 1 63 G 63 63 63 G G V . n A 1 64 A 64 64 64 A A V . n A 1 65 G 65 65 65 G G V . n A 1 66 U 66 66 66 U U V . n A 1 67 C 67 67 67 C C V . n A 1 68 C 68 68 68 C C V . n A 1 69 G 69 69 69 G G V . n A 1 70 G 70 70 70 G G V . n A 1 71 G 71 71 71 G G V . n A 1 72 C 72 72 72 C C V . n A 1 73 A 73 73 73 A A V . n A 1 74 C 74 74 74 C C V . n A 1 75 C 75 75 75 C C V . n A 1 76 A 76 76 76 A A V . n B 2 1 G 1 1 1 G G W . n B 2 2 C 2 2 2 C C W . n B 2 3 C 3 3 3 C C W . n B 2 4 C 4 4 4 C C W . n B 2 5 G 5 5 5 G G W . n B 2 6 G 6 6 6 G G W . n B 2 7 A 7 7 7 A A W . n B 2 8 U 8 8 8 U U W . n B 2 9 A 9 9 9 A A W . n B 2 10 G 10 10 10 G G W . n B 2 11 C 11 11 11 C C W . n B 2 12 U 12 12 12 U U W . n B 2 13 C 13 13 13 C C W . n B 2 14 A 14 14 14 A A W . n B 2 15 G 15 15 15 G G W . n B 2 16 U 16 16 16 U U W . n B 2 17 C 17 17 17 C C W . n B 2 18 G 18 18 18 G G W . n B 2 19 G 19 19 19 G G W . n B 2 20 U 20 20 20 U U W . n B 2 21 A 21 21 21 A A W . n B 2 22 G 22 22 22 G G W . n B 2 23 A 23 23 23 A A W . n B 2 24 G 24 24 24 G G W . n B 2 25 C 25 25 25 C C W . n B 2 26 A 26 26 26 A A W . n B 2 27 G 27 27 27 G G W . n B 2 28 G 28 28 28 G G W . n B 2 29 G 29 29 29 G G W . n B 2 30 G 30 30 30 G G W . n B 2 31 A 31 31 31 A A W . n B 2 32 U 32 32 32 U U W . n B 2 33 U 33 33 33 U U W . n B 2 34 G 34 34 34 G G W . n B 2 35 A 35 35 35 A A W . n B 2 36 A 36 36 36 A A W . n B 2 37 MIA 37 37 37 MIA MIA W . n B 2 38 A 38 38 38 A A W . n B 2 39 U 39 39 39 U U W . n B 2 40 C 40 40 40 C C W . n B 2 41 C 41 41 41 C C W . n B 2 42 C 42 42 42 C C W . n B 2 43 C 43 43 43 C C W . n B 2 44 G 44 44 44 G G W . n B 2 45 U 45 45 45 U U W . n B 2 46 G 46 46 46 G G W . n B 2 47 U 47 47 47 U U W . n B 2 48 C 48 48 48 C C W . n B 2 49 C 49 49 49 C C W . n B 2 50 U 50 50 50 U U W . n B 2 51 U 51 51 51 U U W . n B 2 52 G 52 52 52 G G W . n B 2 53 G 53 53 53 G G W . n B 2 54 U 54 54 54 U U W . n B 2 55 U 55 55 55 U U W . n B 2 56 C 56 56 56 C C W . n B 2 57 G 57 57 57 G G W . n B 2 58 A 58 58 58 A A W . n B 2 59 U 59 59 59 U U W . n B 2 60 U 60 60 60 U U W . n B 2 61 C 61 61 61 C C W . n B 2 62 C 62 62 62 C C W . n B 2 63 G 63 63 63 G G W . n B 2 64 A 64 64 64 A A W . n B 2 65 G 65 65 65 G G W . n B 2 66 U 66 66 66 U U W . n B 2 67 C 67 67 67 C C W . n B 2 68 C 68 68 68 C C W . n B 2 69 G 69 69 69 G G W . n B 2 70 G 70 70 70 G G W . n B 2 71 G 71 71 71 G G W . n B 2 72 C 72 72 72 C C W . n B 2 73 A 73 73 73 A A W . n B 2 74 C 74 74 74 C C W . n B 2 75 C 75 75 75 C C W . n B 2 76 A 76 76 76 A A W . n C 3 1 U 1 34 34 U U X . n C 3 2 U 2 35 35 U U X . n C 3 3 U 3 36 36 U U X . n C 3 4 U 4 37 37 U U X . n C 3 5 U 5 38 38 U U X . n C 3 6 U 6 39 39 U U X . n C 3 7 U 7 40 40 U U X . n C 3 8 U 8 41 41 U U X . n C 3 9 U 9 42 42 U U X . n C 3 10 U 10 43 43 U U X . n C 3 11 U 11 44 44 U U X . n C 3 12 U 12 45 45 U U X . n C 3 13 U 13 46 46 U U X . n C 3 14 U 14 47 47 U U X . n C 3 15 U 15 48 48 U U X . n C 3 16 U 16 49 49 U U X . n C 3 17 U 17 50 50 U U X . n C 3 18 U 18 51 51 U U X . n C 3 19 U 19 52 52 U U X . n C 3 20 U 20 53 53 U U X . n C 3 21 U 21 54 54 U U X . n C 3 22 U 22 55 55 U U X . n C 3 23 U 23 56 56 U U X . n C 3 24 U 24 57 57 U U X . n C 3 25 U 25 58 58 U U X . n C 3 26 U 26 59 59 U U X . n C 3 27 U 27 60 60 U U X . n C 3 28 U 28 61 61 U U X . n # _pdbx_struct_mod_residue.id 1 _pdbx_struct_mod_residue.label_asym_id B _pdbx_struct_mod_residue.label_comp_id MIA _pdbx_struct_mod_residue.label_seq_id 37 _pdbx_struct_mod_residue.auth_asym_id W _pdbx_struct_mod_residue.auth_comp_id MIA _pdbx_struct_mod_residue.auth_seq_id 37 _pdbx_struct_mod_residue.PDB_ins_code ? _pdbx_struct_mod_residue.parent_comp_id A _pdbx_struct_mod_residue.details ? # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2014-07-16 2 'Structure model' 1 1 2014-12-10 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description 1 1 'Structure model' repository 'Initial release' ? 2 2 'Structure model' repository Obsolete ? # _pdbx_audit_revision_group.ordinal 1 _pdbx_audit_revision_group.revision_ordinal 2 _pdbx_audit_revision_group.data_content_type 'Structure model' _pdbx_audit_revision_group.group Other # _em_3d_fitting.id 1 _em_3d_fitting.entry_id 4CXB _em_3d_fitting.ref_space REAL _em_3d_fitting.ref_protocol ? _em_3d_fitting.target_criteria CORRELATION _em_3d_fitting.overall_b_value ? _em_3d_fitting.method MDFIT _em_3d_fitting.details ? # _em_3d_reconstruction.entry_id 4CXB _em_3d_reconstruction.id 1 _em_3d_reconstruction.method 'MULTI-REFERENCE TEMPLATE MATCHING' _em_3d_reconstruction.nominal_pixel_size 1.26 _em_3d_reconstruction.actual_pixel_size 1.26 _em_3d_reconstruction.resolution 6.9 _em_3d_reconstruction.magnification_calibration 'CROSS- -CORRELATION WITH KNOWN STRUCTURE' _em_3d_reconstruction.details 'SUBMISSION BASED ON EXPERIMENTAL DATA FROM EMDB EMD-2620. (DEPOSITION ID: 12402).' _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.algorithm ? _em_3d_reconstruction.num_class_averages ? _em_3d_reconstruction.num_particles ? _em_3d_reconstruction.resolution_method ? _em_3d_reconstruction.symmetry_type ? # _em_buffer.id 1 _em_buffer.name '20MM HEPES-KOH, 5MM MGCL2, 100 MM NH4CL, 6 MM BETA-MERCAPTOETHANOL 0.8 MM SPERMIDINE, 0.6 MM SPERMINE' _em_buffer.specimen_id ? _em_buffer.pH ? _em_buffer.details ? # _em_image_scans.entry_id 4CXB _em_image_scans.id 1 _em_image_scans.number_digital_images 826 _em_image_scans.citation_id ? _em_image_scans.image_recording_id 1 _em_image_scans.od_range ? _em_image_scans.quant_bit_size ? _em_image_scans.sampling_size ? _em_image_scans.scanner_model ? _em_image_scans.details ? # _em_imaging.entry_id 4CXB _em_imaging.id 1 _em_imaging.date 2008-06-02 _em_imaging.temperature ? _em_imaging.microscope_model 'FEI TECNAI F30' _em_imaging.nominal_defocus_min 2000 _em_imaging.nominal_defocus_max 4000 _em_imaging.tilt_angle_min ? _em_imaging.tilt_angle_max ? _em_imaging.nominal_cs 2 _em_imaging.mode 'BRIGHT FIELD' _em_imaging.illumination_mode 'FLOOD BEAM' _em_imaging.nominal_magnification 39000 _em_imaging.calibrated_magnification 65520 _em_imaging.electron_source 'FIELD EMISSION GUN' _em_imaging.accelerating_voltage 300 _em_imaging.details 'MINIMAL DOSE SYSTEM' _em_imaging.specimen_holder_type . _em_imaging.specimen_holder_model . _em_imaging.citation_id ? _em_imaging.specimen_id 1 _em_imaging.astigmatism ? _em_imaging.detector_distance ? _em_imaging.electron_beam_tilt_params ? _em_imaging.recording_temperature_maximum ? _em_imaging.recording_temperature_minimum ? # _em_sample_support.id 1 _em_sample_support.details 'HOLEY CARBON' _em_sample_support.specimen_id 1 _em_sample_support.method ? _em_sample_support.film_material ? _em_sample_support.grid_material ? _em_sample_support.grid_mesh_size ? _em_sample_support.grid_type ? # _em_vitrification.entry_id 4CXB _em_vitrification.id 1 _em_vitrification.details 'VITRIFICATION 1 -- CRYOGEN- ETHANE, HUMIDITY- 80, INSTRUMENT- FEI VITROBOT MARK II, METHOD- BLOT FOR 2 SECONDS BEFORE PLUNGING' _em_vitrification.specimen_id 1 _em_vitrification.citation_id ? _em_vitrification.cryogen_name ? _em_vitrification.humidity ? _em_vitrification.instrument ? _em_vitrification.method ? _em_vitrification.temp ? _em_vitrification.time_resolved_state ? # _em_experiment.entry_id 4CXB _em_experiment.reconstruction_method 'SINGLE PARTICLE' _em_experiment.id 1 _em_experiment.entity_assembly_id 1 _em_experiment.aggregation_state ? # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 "O3'" _pdbx_validate_rmsd_bond.auth_asym_id_1 W _pdbx_validate_rmsd_bond.auth_comp_id_1 A _pdbx_validate_rmsd_bond.auth_seq_id_1 36 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 P _pdbx_validate_rmsd_bond.auth_asym_id_2 W _pdbx_validate_rmsd_bond.auth_comp_id_2 MIA _pdbx_validate_rmsd_bond.auth_seq_id_2 37 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.521 _pdbx_validate_rmsd_bond.bond_target_value 1.607 _pdbx_validate_rmsd_bond.bond_deviation -0.086 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.012 _pdbx_validate_rmsd_bond.linker_flag Y # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 P X U 58 ? ? "O5'" X U 58 ? ? "C5'" X U 58 ? ? 141.18 120.90 20.28 1.60 N 2 1 "C4'" X U 58 ? ? "C3'" X U 58 ? ? "O3'" X U 58 ? ? 131.65 113.00 18.65 2.00 N 3 1 "O3'" X U 58 ? ? P X U 59 ? ? "O5'" X U 59 ? ? 115.66 104.00 11.66 1.90 Y 4 1 "O5'" X U 59 ? ? "C5'" X U 59 ? ? "C4'" X U 59 ? ? 103.52 109.40 -5.88 0.80 N 5 1 P X U 59 ? ? "O5'" X U 59 ? ? "C5'" X U 59 ? ? 137.25 120.90 16.35 1.60 N 6 1 "C4'" X U 59 ? ? "C3'" X U 59 ? ? "O3'" X U 59 ? ? 125.30 113.00 12.30 2.00 N 7 1 "O3'" X U 59 ? ? P X U 60 ? ? "O5'" X U 60 ? ? 91.80 104.00 -12.20 1.90 Y 8 1 "O5'" X U 60 ? ? "C5'" X U 60 ? ? "C4'" X U 60 ? ? 124.01 111.70 12.31 1.90 N 9 1 "C5'" X U 60 ? ? "C4'" X U 60 ? ? "C3'" X U 60 ? ? 129.40 116.00 13.40 1.60 N # _pdbx_validate_chiral.id 1 _pdbx_validate_chiral.PDB_model_num 1 _pdbx_validate_chiral.auth_atom_id "C3'" _pdbx_validate_chiral.label_alt_id ? _pdbx_validate_chiral.auth_asym_id X _pdbx_validate_chiral.auth_comp_id U _pdbx_validate_chiral.auth_seq_id 58 _pdbx_validate_chiral.PDB_ins_code ? _pdbx_validate_chiral.details PLANAR _pdbx_validate_chiral.omega . # _em_image_processing.id 1 _em_image_processing.image_recording_id . _em_image_processing.details ? # _em_specimen.id 1 _em_specimen.experiment_id 1 _em_specimen.concentration ? _em_specimen.details ? _em_specimen.embedding_applied . _em_specimen.shadowing_applied . _em_specimen.staining_applied . _em_specimen.vitrification_applied . # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 4CXB 'double helix' 4CXB 'a-form double helix' 4CXB 'hairpin loop' 4CXB 'mismatched base pair' 4CXB 'four-way junction' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A G 1 1_555 A C 72 1_555 0.788 0.323 -0.330 2.532 0.000 -12.343 1 V_G1:C72_V V 1 ? V 72 ? ? 1 1 A C 2 1_555 A G 71 1_555 0.218 0.429 -0.572 9.997 0.000 1.594 2 V_C2:G71_V V 2 ? V 71 ? 19 1 1 A C 4 1_555 A G 69 1_555 1.357 -0.215 -0.155 -0.035 0.000 -3.886 3 V_C4:G69_V V 4 ? V 69 ? 19 1 1 A G 5 1_555 A C 68 1_555 0.672 0.694 1.509 -15.143 0.000 10.650 4 V_G5:C68_V V 5 ? V 68 ? ? 1 1 A G 6 1_555 A C 67 1_555 -0.916 -0.449 0.945 1.731 0.000 -16.958 5 V_G6:C67_V V 6 ? V 67 ? ? 1 1 A A 7 1_555 A U 66 1_555 1.311 0.811 -0.250 -0.146 0.000 -22.437 6 V_A7:U66_V V 7 ? V 66 ? ? ? 1 A C 49 1_555 A G 65 1_555 0.000 0.373 -0.592 25.733 0.000 4.007 7 V_C49:G65_V V 49 ? V 65 ? 19 1 1 A U 50 1_555 A A 64 1_555 0.326 0.224 -1.240 5.854 0.000 0.600 8 V_U50:A64_V V 50 ? V 64 ? 20 1 1 A U 51 1_555 A G 63 1_555 3.047 -0.048 0.524 -6.199 0.000 20.357 9 V_U51:G63_V V 51 ? V 63 ? ? 1 1 A G 52 1_555 A C 62 1_555 0.380 0.213 -0.142 -3.517 0.000 -9.444 10 V_G52:C62_V V 52 ? V 62 ? ? 1 1 A G 53 1_555 A C 61 1_555 0.904 0.432 0.310 -13.981 0.000 2.922 11 V_G53:C61_V V 53 ? V 61 ? ? 1 1 A U 54 1_555 A A 58 1_555 4.249 -1.825 0.762 -10.842 0.000 -99.692 12 V_U54:A58_V V 54 ? V 58 ? 24 4 1 A U 55 1_555 A G 18 1_555 1.051 -5.920 0.686 11.387 0.000 -96.081 13 V_U55:G18_V V 55 ? V 18 ? ? ? 1 A A 38 1_555 A U 32 1_555 -3.632 -0.960 -0.342 10.376 0.000 -28.830 14 V_A38:U32_V V 38 ? V 32 ? ? ? 1 A U 39 1_555 A A 31 1_555 0.482 0.120 -0.140 9.525 0.000 0.548 15 V_U39:A31_V V 39 ? V 31 ? 20 1 1 A C 40 1_555 A G 30 1_555 0.966 0.162 -0.118 -5.427 0.000 1.047 16 V_C40:G30_V V 40 ? V 30 ? 19 1 1 A C 41 1_555 A G 29 1_555 -1.054 0.434 0.706 -2.017 0.000 -5.341 17 V_C41:G29_V V 41 ? V 29 ? ? 1 1 A C 42 1_555 A G 28 1_555 -0.856 -0.057 -0.747 6.205 0.000 4.614 18 V_C42:G28_V V 42 ? V 28 ? 19 1 1 A C 43 1_555 A G 27 1_555 -1.031 0.195 0.513 -13.735 0.000 -1.527 19 V_C43:G27_V V 43 ? V 27 ? 19 1 1 A G 44 1_555 A A 26 1_555 0.596 1.885 -0.040 -22.029 0.000 -15.025 20 V_G44:A26_V V 44 ? V 26 ? 8 1 1 A G 10 1_555 A C 25 1_555 -1.428 0.337 -0.405 -1.733 0.000 13.921 21 V_G10:C25_V V 10 ? V 25 ? ? 1 1 A C 11 1_555 A G 24 1_555 0.411 0.064 0.015 -9.004 0.000 -0.763 22 V_C11:G24_V V 11 ? V 24 ? 19 1 1 A U 12 1_555 A A 23 1_555 0.886 0.271 0.388 -2.589 0.000 -12.174 23 V_U12:A23_V V 12 ? V 23 ? ? ? 1 A C 13 1_555 A G 22 1_555 2.086 -0.487 -0.839 23.360 0.000 -6.909 24 V_C13:G22_V V 13 ? V 22 ? ? 1 1 A A 14 1_555 A U 8 1_555 -3.851 -1.016 -1.266 -7.031 0.000 -105.230 25 V_A14:U8_V V 14 ? V 8 ? 24 4 1 A G 15 1_555 A C 48 1_555 -0.066 3.003 -0.265 1.024 0.000 158.899 26 V_G15:C48_V V 15 ? V 48 ? 22 2 1 A U 16 1_555 A U 59 1_555 -2.042 -2.552 0.766 11.405 0.000 -175.144 27 V_U16:U59_V V 16 ? V 59 ? 13 2 1 B G 1 1_555 B C 72 1_555 -0.615 0.279 0.064 -13.990 0.000 -5.355 28 W_G1:C72_W W 1 ? W 72 ? ? 1 1 B C 2 1_555 B G 71 1_555 0.490 0.057 -0.397 2.225 0.000 -4.694 29 W_C2:G71_W W 2 ? W 71 ? 19 1 1 B C 3 1_555 B G 70 1_555 0.014 0.208 -0.542 3.653 0.000 -0.881 30 W_C3:G70_W W 3 ? W 70 ? 19 1 1 B C 4 1_555 B G 69 1_555 0.467 0.359 0.263 3.288 0.000 8.452 31 W_C4:G69_W W 4 ? W 69 ? ? 1 1 B G 5 1_555 B C 68 1_555 -0.543 0.188 -0.502 -2.601 0.000 -0.760 32 W_G5:C68_W W 5 ? W 68 ? 19 1 1 B G 6 1_555 B C 67 1_555 -0.652 0.194 -0.092 -7.519 0.000 3.404 33 W_G6:C67_W W 6 ? W 67 ? 19 1 1 B A 7 1_555 B U 66 1_555 0.042 0.231 0.174 -1.372 0.000 -3.110 34 W_A7:U66_W W 7 ? W 66 ? 20 1 1 B C 49 1_555 B G 65 1_555 0.623 0.165 0.361 -5.694 0.000 3.877 35 W_C49:G65_W W 49 ? W 65 ? 19 1 1 B U 50 1_555 B A 64 1_555 0.011 0.242 -0.146 -10.657 0.000 2.105 36 W_U50:A64_W W 50 ? W 64 ? 20 1 1 B U 51 1_555 B G 63 1_555 2.309 -0.155 -0.394 1.853 0.000 -6.441 37 W_U51:G63_W W 51 ? W 63 ? 28 1 1 B G 52 1_555 B C 62 1_555 -0.336 0.153 -0.201 -7.091 0.000 -1.360 38 W_G52:C62_W W 52 ? W 62 ? 19 1 1 B G 53 1_555 B C 61 1_555 -0.956 0.139 0.402 -22.976 0.000 4.711 39 W_G53:C61_W W 53 ? W 61 ? ? 1 1 B A 38 1_555 B U 32 1_555 -4.807 -0.311 0.891 22.295 0.000 15.626 40 W_A38:U32_W W 38 ? W 32 ? ? ? 1 B U 39 1_555 B A 31 1_555 0.276 0.036 0.978 2.219 0.000 -1.489 41 W_U39:A31_W W 39 ? W 31 ? 20 1 1 B C 40 1_555 B G 30 1_555 0.537 0.408 -0.383 21.382 0.000 3.986 42 W_C40:G30_W W 40 ? W 30 ? ? 1 1 B C 41 1_555 B G 29 1_555 0.174 0.236 0.074 11.237 0.000 1.934 43 W_C41:G29_W W 41 ? W 29 ? 19 1 1 B C 42 1_555 B G 28 1_555 0.423 0.316 0.350 -10.984 0.000 2.829 44 W_C42:G28_W W 42 ? W 28 ? 19 1 1 B C 43 1_555 B G 27 1_555 0.225 0.206 0.186 -10.836 0.000 -2.817 45 W_C43:G27_W W 43 ? W 27 ? 19 1 1 B G 10 1_555 B C 25 1_555 -0.446 0.237 0.516 0.564 0.000 1.839 46 W_G10:C25_W W 10 ? W 25 ? 19 1 1 B C 11 1_555 B G 24 1_555 0.338 0.217 0.786 -6.622 0.000 0.760 47 W_C11:G24_W W 11 ? W 24 ? 19 1 1 B U 12 1_555 B A 23 1_555 0.066 0.118 -0.100 -3.360 0.000 -8.592 48 W_U12:A23_W W 12 ? W 23 ? 20 1 1 B C 13 1_555 B G 22 1_555 -0.012 0.129 0.458 9.490 0.000 1.504 49 W_C13:G22_W W 13 ? W 22 ? 19 1 1 B G 15 1_555 B C 48 1_555 1.857 0.526 -1.741 -3.983 0.000 -119.473 50 W_G15:C48_W W 15 ? W 48 ? ? 4 1 B G 18 1_555 B U 55 1_555 -0.366 1.224 -0.857 -15.285 0.000 165.340 51 W_G18:U55_W W 18 ? W 55 ? ? ? # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A G 1 1_555 A C 72 1_555 A C 2 1_555 A G 71 1_555 0.415 -2.031 3.222 2.795 5.014 35.401 -3.981 -0.295 2.940 8.179 -4.560 35.849 1 VV_G1C2:G71C72_VV V 1 ? V 72 ? V 2 ? V 71 ? 1 A C 4 1_555 A G 69 1_555 A G 5 1_555 A C 68 1_555 0.043 -2.106 3.371 -4.885 10.842 34.098 -4.841 -0.718 2.573 17.830 8.034 36.054 2 VV_C4G5:C68G69_VV V 4 ? V 69 ? V 5 ? V 68 ? 1 A G 5 1_555 A C 68 1_555 A G 6 1_555 A C 67 1_555 -1.309 -1.577 2.885 -1.847 -0.019 24.372 -3.720 2.576 2.976 -0.044 4.368 24.441 3 VV_G5G6:C67C68_VV V 5 ? V 68 ? V 6 ? V 67 ? 1 A G 6 1_555 A C 67 1_555 A A 7 1_555 A U 66 1_555 -0.985 -1.536 3.717 5.607 5.523 37.144 -3.127 2.290 3.285 8.553 -8.683 37.940 4 VV_G6A7:U66C67_VV V 6 ? V 67 ? V 7 ? V 66 ? 1 A A 7 1_555 A U 66 1_555 A C 49 1_555 A G 65 1_555 1.831 -1.786 2.582 7.207 5.550 28.974 -4.315 -2.328 2.574 10.762 -13.976 30.339 5 VV_A7C49:G65U66_VV V 7 ? V 66 ? V 49 ? V 65 ? 1 A C 49 1_555 A G 65 1_555 A U 50 1_555 A A 64 1_555 -0.752 -1.276 3.939 2.039 13.471 39.569 -3.405 1.299 3.311 19.221 -2.909 41.760 6 VV_C49U50:A64G65_VV V 49 ? V 65 ? V 50 ? V 64 ? 1 A U 50 1_555 A A 64 1_555 A U 51 1_555 A G 63 1_555 1.779 -1.511 3.678 -4.744 8.983 35.215 -3.685 -3.508 2.960 14.480 7.646 36.607 7 VV_U50U51:G63A64_VV V 50 ? V 64 ? V 51 ? V 63 ? 1 A U 51 1_555 A G 63 1_555 A G 52 1_555 A C 62 1_555 -1.649 -1.264 3.136 6.009 13.420 24.607 -5.025 4.441 1.781 28.471 -12.748 28.607 8 VV_U51G52:C62G63_VV V 51 ? V 63 ? V 52 ? V 62 ? 1 A G 52 1_555 A C 62 1_555 A G 53 1_555 A C 61 1_555 0.502 -1.892 3.446 -2.461 9.704 35.129 -4.331 -1.133 2.801 15.687 3.979 36.484 9 VV_G52G53:C61C62_VV V 52 ? V 62 ? V 53 ? V 61 ? 1 A G 53 1_555 A C 61 1_555 A U 54 1_555 A A 58 1_555 -2.837 -1.670 3.476 0.484 -1.692 81.574 -1.233 2.184 3.491 -1.295 -0.371 81.590 10 VV_G53U54:A58C61_VV V 53 ? V 61 ? V 54 ? V 58 ? 1 A U 54 1_555 A A 58 1_555 A U 55 1_555 A G 18 1_555 1.703 -1.853 3.452 13.642 2.605 48.167 -2.401 -0.914 3.678 3.117 -16.324 50.014 11 VV_U54U55:G18A58_VV V 54 ? V 58 ? V 55 ? V 18 ? 1 A A 38 1_555 A U 32 1_555 A U 39 1_555 A A 31 1_555 1.041 -1.453 3.852 -7.157 -2.244 49.601 -1.526 -1.830 3.735 -2.657 8.475 50.129 12 VV_A38U39:A31U32_VV V 38 ? V 32 ? V 39 ? V 31 ? 1 A U 39 1_555 A A 31 1_555 A C 40 1_555 A G 30 1_555 -0.463 -2.640 3.608 1.148 13.110 33.721 -6.029 0.902 2.430 21.606 -1.893 36.128 13 VV_U39C40:G30A31_VV V 39 ? V 31 ? V 40 ? V 30 ? 1 A C 40 1_555 A G 30 1_555 A C 41 1_555 A G 29 1_555 -0.606 -2.316 3.165 -9.104 7.363 17.041 -9.286 -1.802 2.062 21.811 26.969 20.652 14 VV_C40C41:G29G30_VV V 40 ? V 30 ? V 41 ? V 29 ? 1 A C 41 1_555 A G 29 1_555 A C 42 1_555 A G 28 1_555 0.351 -2.303 2.919 7.515 11.272 30.385 -5.516 0.377 1.991 20.287 -13.524 33.203 15 VV_C41C42:G28G29_VV V 41 ? V 29 ? V 42 ? V 28 ? 1 A C 42 1_555 A G 28 1_555 A C 43 1_555 A G 27 1_555 1.308 -1.874 4.010 -7.098 11.718 28.460 -5.795 -3.828 2.658 22.277 13.493 31.525 16 VV_C42C43:G27G28_VV V 42 ? V 28 ? V 43 ? V 27 ? 1 A C 43 1_555 A G 27 1_555 A G 44 1_555 A A 26 1_555 -1.572 -1.109 3.577 3.595 1.390 43.522 -1.633 2.481 3.408 1.871 -4.838 43.684 17 VV_C43G44:A26G27_VV V 43 ? V 27 ? V 44 ? V 26 ? 1 A G 44 1_555 A A 26 1_555 A G 10 1_555 A C 25 1_555 -2.532 -2.764 3.173 14.546 4.419 54.054 -3.158 3.403 2.262 4.757 -15.660 55.996 18 VV_G44G10:C25A26_VV V 44 ? V 26 ? V 10 ? V 25 ? 1 A G 10 1_555 A C 25 1_555 A C 11 1_555 A G 24 1_555 -1.044 -1.513 3.502 -0.917 10.182 43.857 -2.920 1.280 3.114 13.416 1.208 44.976 19 VV_G10C11:G24C25_VV V 10 ? V 25 ? V 11 ? V 24 ? 1 A C 11 1_555 A G 24 1_555 A U 12 1_555 A A 23 1_555 -0.427 -1.122 3.030 -1.601 8.737 44.644 -2.144 0.426 2.787 11.368 2.083 45.474 20 VV_C11U12:A23G24_VV V 11 ? V 24 ? V 12 ? V 23 ? 1 A U 12 1_555 A A 23 1_555 A C 13 1_555 A G 22 1_555 1.730 -1.214 2.827 12.794 -0.483 22.125 -2.609 -0.220 3.335 -1.144 -30.294 25.522 21 VV_U12C13:G22A23_VV V 12 ? V 23 ? V 13 ? V 22 ? 1 A C 13 1_555 A G 22 1_555 A A 14 1_555 A U 8 1_555 -2.445 -1.453 4.690 -5.942 10.641 56.470 -2.328 2.075 4.587 11.103 6.200 57.664 22 VV_C13A14:U8G22_VV V 13 ? V 22 ? V 14 ? V 8 ? 1 A A 14 1_555 A U 8 1_555 A G 15 1_555 A C 48 1_555 1.876 -3.375 3.203 10.209 -0.491 -63.471 3.195 2.174 2.880 0.463 9.638 -64.204 23 VV_A14G15:C48U8_VV V 14 ? V 8 ? V 15 ? V 48 ? 1 A G 15 1_555 A C 48 1_555 A U 16 1_555 A U 59 1_555 1.277 -0.569 2.861 0.941 -9.305 -176.489 0.288 0.639 2.859 4.654 0.471 -176.501 24 VV_G15U16:U59C48_VV V 15 ? V 48 ? V 16 ? V 59 ? 1 B G 1 1_555 B C 72 1_555 B C 2 1_555 B G 71 1_555 0.433 -1.771 3.013 7.114 3.066 32.954 -3.495 0.303 2.870 5.315 -12.329 33.827 25 WW_G1C2:G71C72_WW W 1 ? W 72 ? W 2 ? W 71 ? 1 B C 2 1_555 B G 71 1_555 B C 3 1_555 B G 70 1_555 0.196 -0.857 3.183 3.671 12.079 32.315 -3.175 0.198 2.705 20.741 -6.304 34.632 26 WW_C2C3:G70G71_WW W 2 ? W 71 ? W 3 ? W 70 ? 1 B C 3 1_555 B G 70 1_555 B C 4 1_555 B G 69 1_555 0.980 -1.084 3.268 -1.972 13.764 36.108 -3.229 -1.710 2.642 21.260 3.046 38.609 27 WW_C3C4:G69G70_WW W 3 ? W 70 ? W 4 ? W 69 ? 1 B C 4 1_555 B G 69 1_555 B G 5 1_555 B C 68 1_555 -0.662 -1.406 3.328 2.895 12.207 27.848 -4.918 1.791 2.432 23.889 -5.664 30.492 28 WW_C4G5:C68G69_WW W 4 ? W 69 ? W 5 ? W 68 ? 1 B G 5 1_555 B C 68 1_555 B G 6 1_555 B C 67 1_555 0.551 -1.704 3.517 -0.861 6.518 28.710 -4.770 -1.272 3.046 12.931 1.708 29.437 29 WW_G5G6:C67C68_WW W 5 ? W 68 ? W 6 ? W 67 ? 1 B G 6 1_555 B C 67 1_555 B A 7 1_555 B U 66 1_555 -0.074 -2.070 3.284 1.403 8.788 32.240 -4.942 0.344 2.639 15.461 -2.468 33.414 30 WW_G6A7:U66C67_WW W 6 ? W 67 ? W 7 ? W 66 ? 1 B A 7 1_555 B U 66 1_555 B C 49 1_555 B G 65 1_555 1.478 -2.228 3.198 4.463 15.205 44.599 -3.897 -1.520 2.483 19.327 -5.673 47.195 31 WW_A7C49:G65U66_WW W 7 ? W 66 ? W 49 ? W 65 ? 1 B C 49 1_555 B G 65 1_555 B U 50 1_555 B A 64 1_555 -2.194 -3.028 3.462 2.330 -6.139 16.197 -5.535 8.907 3.978 -20.715 -7.861 17.469 32 WW_C49U50:A64G65_WW W 49 ? W 65 ? W 50 ? W 64 ? 1 B U 50 1_555 B A 64 1_555 B U 51 1_555 B G 63 1_555 -0.456 -1.520 3.074 3.042 0.397 41.624 -2.173 0.939 3.021 0.557 -4.274 41.732 33 WW_U50U51:G63A64_WW W 50 ? W 64 ? W 51 ? W 63 ? 1 B U 51 1_555 B G 63 1_555 B G 52 1_555 B C 62 1_555 0.856 -2.095 3.235 2.431 24.790 22.206 -6.684 -1.199 0.697 48.681 -4.774 33.253 34 WW_U51G52:C62G63_WW W 51 ? W 63 ? W 52 ? W 62 ? 1 B G 52 1_555 B C 62 1_555 B G 53 1_555 B C 61 1_555 0.860 -1.985 3.854 -0.053 0.201 30.177 -3.861 -1.664 3.840 0.387 0.102 30.177 35 WW_G52G53:C61C62_WW W 52 ? W 62 ? W 53 ? W 61 ? 1 B A 38 1_555 B U 32 1_555 B U 39 1_555 B A 31 1_555 -1.539 -1.401 3.925 -6.547 11.103 54.005 -2.280 1.199 3.742 12.035 7.096 55.410 36 WW_A38U39:A31U32_WW W 38 ? W 32 ? W 39 ? W 31 ? 1 B U 39 1_555 B A 31 1_555 B C 40 1_555 B G 30 1_555 -0.386 -1.794 2.920 8.203 -6.181 26.408 -2.327 2.571 3.003 -12.924 -17.152 28.302 37 WW_U39C40:G30A31_WW W 39 ? W 31 ? W 40 ? W 30 ? 1 B C 40 1_555 B G 30 1_555 B C 41 1_555 B G 29 1_555 -1.264 -1.869 3.528 -7.490 10.875 32.628 -4.779 0.935 2.982 18.444 12.703 35.131 38 WW_C40C41:G29G30_WW W 40 ? W 30 ? W 41 ? W 29 ? 1 B C 41 1_555 B G 29 1_555 B C 42 1_555 B G 28 1_555 0.086 -3.251 3.775 -2.552 6.792 28.575 -7.901 -0.737 2.922 13.488 5.068 29.463 39 WW_C41C42:G28G29_WW W 41 ? W 29 ? W 42 ? W 28 ? 1 B C 42 1_555 B G 28 1_555 B C 43 1_555 B G 27 1_555 0.065 -1.830 3.172 5.414 3.010 32.709 -3.671 0.742 2.969 5.286 -9.508 33.275 40 WW_C42C43:G27G28_WW W 42 ? W 28 ? W 43 ? W 27 ? 1 B C 43 1_555 B G 27 1_555 B G 10 1_555 B C 25 1_555 -1.095 -3.706 5.812 16.279 21.663 95.031 -3.060 1.179 4.923 14.466 -10.871 97.919 41 WW_C43G10:C25G27_WW W 43 ? W 27 ? W 10 ? W 25 ? 1 B G 10 1_555 B C 25 1_555 B C 11 1_555 B G 24 1_555 -0.534 -1.644 3.389 -3.072 3.050 40.967 -2.675 0.419 3.293 4.343 4.374 41.185 42 WW_G10C11:G24C25_WW W 10 ? W 25 ? W 11 ? W 24 ? 1 B C 11 1_555 B G 24 1_555 B U 12 1_555 B A 23 1_555 -0.869 -1.306 3.176 9.461 10.706 31.973 -3.593 2.701 2.295 18.335 -16.202 34.944 43 WW_C11U12:A23G24_WW W 11 ? W 24 ? W 12 ? W 23 ? 1 B U 12 1_555 B A 23 1_555 B C 13 1_555 B G 22 1_555 2.684 -1.681 2.916 -4.316 0.731 15.750 -6.306 -11.766 2.031 2.602 15.366 16.343 44 WW_U12C13:G22A23_WW W 12 ? W 23 ? W 13 ? W 22 ? 1 B C 13 1_555 B G 22 1_555 B G 15 1_555 B C 48 1_555 -3.080 -1.939 6.117 34.924 5.074 111.058 -1.252 2.520 5.311 3.033 -20.880 114.720 45 WW_C13G15:C48G22_WW W 13 ? W 22 ? W 15 ? W 48 ? #