data_4CYT # _entry.id 4CYT # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.280 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 4CYT WWPDB D_1000179296 # loop_ _pdbx_database_PDB_obs_spr.id _pdbx_database_PDB_obs_spr.date _pdbx_database_PDB_obs_spr.pdb_id _pdbx_database_PDB_obs_spr.replace_pdb_id _pdbx_database_PDB_obs_spr.details OBSLTE 1989-07-12 5CYT 4CYT ? SPRSDE 1980-09-16 4CYT 2CYT ? # _pdbx_database_status.entry_id 4CYT _pdbx_database_status.status_code OBS _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.recvd_initial_deposition_date 1980-07-01 _pdbx_database_status.deposit_site BNL _pdbx_database_status.process_site BNL _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.methods_development_category ? # _audit_author.name 'Takano, T.' _audit_author.pdbx_ordinal 1 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'Redox Conformation Changes in Refined Tuna Cytochrome C' Proc.Natl.Acad.Sci.USA 77 6371 ? 1980 PNASA6 US 0027-8424 040 ? ? ? 1 'Conformation Change of Cytochrome C. I. Ferrocytochrome C Structure Refined at 1.5 Angstroms Resolution' J.Mol.Biol. 153 79 ? 1981 JMOBAK UK 0022-2836 070 ? ? ? 2 ;Conformation Change of Cytochrome C. II. Ferricytochrome C Refinement at 1.8 Angstroms and Comparison with the Ferrocytochrome Structure ; J.Mol.Biol. 153 95 ? 1981 JMOBAK UK 0022-2836 070 ? ? ? 3 'Cytochrome C and the Evolution of Energy Metabolism' Sci.Am. 242 136 ? 1980 SCAMAC US 0036-8733 420 ? ? ? 4 'Internal Mobility of Ferrocytochrome C' Nature 287 659 ? 1980 NATUAS UK 0028-0836 006 ? ? ? 5 'Tuna Cytochrome C at 2.0 Angstroms Resolution. II. Ferrocytochrome Structure Analysis' J.Biol.Chem. 252 776 ? 1977 JBCHA3 US 0021-9258 071 ? ? ? 6 'Tuna Cytochrome C at 2.0 Angstroms Resolution. I. Ferricytochrome Structure Analysis' J.Biol.Chem. 252 759 ? 1977 JBCHA3 US 0021-9258 071 ? ? ? 7 'The Structure of Ferrocytochrome C at 2.45 Angstroms Resolution' J.Biol.Chem. 248 5234 ? 1973 JBCHA3 US 0021-9258 071 ? ? ? 8 'The Structure and History of an Ancient Protein' Sci.Am. 226 58 ? 1972 SCAMAC US 0036-8733 420 ? ? ? 9 ? 'Atlas of Protein Sequence and Structure,Supplement 2' 5 39 ? 1976 ? ? 0-912466-05-7 435 'National Biomedical Research Foundation, Silver Spring,Md.' ? ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Takano, T.' 1 primary 'Dickerson, R.E.' 2 1 'Takano, T.' 3 1 'Dickerson, R.E.' 4 2 'Takano, T.' 5 2 'Dickerson, R.E.' 6 3 'Dickerson, R.E.' 7 4 'Northrup, S.H.' 8 4 'Pear, M.R.' 9 4 'Mccammon, J.A.' 10 4 'Karplus, M.' 11 4 'Takano, T.' 12 5 'Takano, T.' 13 5 'Trus, B.L.' 14 5 'Mandel, N.' 15 5 'Mandel, G.' 16 5 'Kallai, O.B.' 17 5 'Swanson, R.' 18 5 'Dickerson, R.E.' 19 6 'Swanson, R.' 20 6 'Trus, B.L.' 21 6 'Mandel, N.' 22 6 'Mandel, G.' 23 6 'Kallai, O.B.' 24 6 'Dickerson, R.E.' 25 7 'Takano, T.' 26 7 'Kallai, O.B.' 27 7 'Swanson, R.' 28 7 'Dickerson, R.E.' 29 8 'Dickerson, R.E.' 30 # _citation_editor.citation_id 9 _citation_editor.name 'Dayhoff, M.O.' _citation_editor.ordinal 1 # _cell.entry_id 4CYT _cell.length_a 37.330 _cell.length_b 87.100 _cell.length_c 34.440 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4CYT _symmetry.space_group_name_H-M 'P 21 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 non-polymer man 'ACETYL GROUP' 11416.114 1 ? ? ? ? 2 non-polymer syn 'PROTOPORPHYRIN IX CONTAINING FE' 616.487 1 ? ? ? ? 3 water nat water 18.015 54 ? ? ? ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ACE non-polymer . 'ACETYL GROUP' ? 'C2 H4 O' 44.053 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HEM non-polymer . 'PROTOPORPHYRIN IX CONTAINING FE' HEME 'C34 H32 Fe N4 O4' 616.487 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 4CYT _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number ? # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.45 _exptl_crystal.density_percent_sol 49.84 _exptl_crystal.description ? # _diffrn.id 1 _diffrn.ambient_temp ? _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l ? _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength . _diffrn_radiation_wavelength.wt 1.0 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 4CYT _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs ? _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low ? _refine.ls_d_res_high . _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_obs ? _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work ? _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 803 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 43 _refine_hist.number_atoms_solvent 54 _refine_hist.number_atoms_total 900 _refine_hist.d_res_high . _refine_hist.d_res_low . _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function o_bond_d ? ? ? ? 'X-RAY DIFFRACTION' ? o_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? o_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? o_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? o_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? o_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? o_angle_deg ? ? ? ? 'X-RAY DIFFRACTION' ? o_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? o_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? o_dihedral_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? o_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? o_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? o_improper_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? o_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? o_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? o_mcbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? o_mcangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? o_scbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? o_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? # _struct.entry_id 4CYT _struct.title 'REDOX CONFORMATION CHANGES IN REFINED TUNA CYTOCHROME $C' _struct.pdbx_descriptor 'PROTEIN, PROTOPORPHYRIN IX CONTAINING FE' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4CYT _struct_keywords.pdbx_keywords 'ELECTRON TRANSPORT (HEME PROTEIN)' _struct_keywords.text 'ELECTRON TRANSPORT (HEME PROTEIN)' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 NR ASP A . ? CYS A . ? ASP R 2 CYS R 14 1 ? 13 HELX_P HELX_P2 50R THR A . ? LYS A . ? THR R 49 LYS R 55 1 ? 7 HELX_P HELX_P3 60R ASN A . ? GLU A . ? ASN R 60 GLU R 69 1 ? 10 HELX_P HELX_P4 70R GLU A . ? ILE A . ? GLU R 69 ILE R 75 1 'INCOMPLETE DUE TO PRO 76' 7 HELX_P HELX_P5 CR LYS A . ? THR A . ? LYS R 87 THR R 102 1 ? 16 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _database_PDB_matrix.entry_id 4CYT _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 4CYT _atom_sites.fract_transf_matrix[1][1] .026788 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] .011481 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] .029036 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C FE N O S # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code A 1 ACE 1 0 0 ACE ACE R . A 1 GLY 2 1 1 GLY GLY R . A 1 ASP 3 2 2 ASP ASP R . A 1 VAL 4 3 3 VAL VAL R . A 1 ALA 5 4 4 ALA ALA R . A 1 LYS 6 5 5 LYS LYS R . A 1 GLY 7 6 6 GLY GLY R . A 1 LYS 8 7 7 LYS LYS R . A 1 LYS 9 8 8 LYS LYS R . A 1 THR 10 9 9 THR THR R . A 1 PHE 11 10 10 PHE PHE R . A 1 VAL 12 11 11 VAL VAL R . A 1 GLN 13 12 12 GLN GLN R . A 1 LYS 14 13 13 LYS LYS R . A 1 CYS 15 14 14 CYS CYS R . A 1 ALA 16 15 15 ALA ALA R . A 1 GLN 17 16 16 GLN GLN R . A 1 CYS 18 17 17 CYS CYS R . A 1 HIS 19 18 18 HIS HIS R . A 1 THR 20 19 19 THR THR R . A 1 VAL 21 20 20 VAL VAL R . A 1 GLU 22 21 21 GLU GLU R . A 1 ASN 23 22 22 ASN ASN R . A 1 GLY 24 23 23 GLY GLY R . A 1 GLY 25 24 24 GLY GLY R . A 1 LYS 26 25 25 LYS LYS R . A 1 HIS 27 26 26 HIS HIS R . A 1 LYS 28 27 27 LYS LYS R . A 1 VAL 29 28 28 VAL VAL R . A 1 GLY 30 29 29 GLY GLY R . A 1 PRO 31 30 30 PRO PRO R . A 1 ASN 32 31 31 ASN ASN R . A 1 LEU 33 32 32 LEU LEU R . A 1 TRP 34 33 33 TRP TRP R . A 1 GLY 35 34 34 GLY GLY R . A 1 LEU 36 35 35 LEU LEU R . A 1 PHE 37 36 36 PHE PHE R . A 1 GLY 38 37 37 GLY GLY R . A 1 ARG 39 38 38 ARG ARG R . A 1 LYS 40 39 39 LYS LYS R . A 1 THR 41 40 40 THR THR R . A 1 GLY 42 41 41 GLY GLY R . A 1 GLN 43 42 42 GLN GLN R . A 1 ALA 44 43 43 ALA ALA R . A 1 GLU 45 44 44 GLU GLU R . A 1 GLY 46 45 45 GLY GLY R . A 1 TYR 47 46 46 TYR TYR R . A 1 SER 48 47 47 SER SER R . A 1 TYR 49 48 48 TYR TYR R . A 1 THR 50 49 49 THR THR R . A 1 ASP 51 50 50 ASP ASP R . A 1 ALA 52 51 51 ALA ALA R . A 1 ASN 53 52 52 ASN ASN R . A 1 LYS 54 53 53 LYS LYS R . A 1 SER 55 54 54 SER SER R . A 1 LYS 56 55 55 LYS LYS R . A 1 GLY 57 56 56 GLY GLY R . A 1 ILE 58 57 57 ILE ILE R . A 1 VAL 59 58 58 VAL VAL R . A 1 TRP 60 59 59 TRP TRP R . A 1 ASN 61 60 60 ASN ASN R . A 1 ASN 62 61 61 ASN ASN R . A 1 ASP 63 62 62 ASP ASP R . A 1 THR 64 63 63 THR THR R . A 1 LEU 65 64 64 LEU LEU R . A 1 MET 66 65 65 MET MET R . A 1 GLU 67 66 66 GLU GLU R . A 1 TYR 68 67 67 TYR TYR R . A 1 LEU 69 68 68 LEU LEU R . A 1 GLU 70 69 69 GLU GLU R . A 1 ASN 71 70 70 ASN ASN R . A 1 PRO 72 71 71 PRO PRO R . A 1 LYS 73 72 72 LYS LYS R . A 1 LYS 74 73 73 LYS LYS R . A 1 TYR 75 74 74 TYR TYR R . A 1 ILE 76 75 75 ILE ILE R . A 1 PRO 77 76 76 PRO PRO R . A 1 GLY 78 77 77 GLY GLY R . A 1 THR 79 78 78 THR THR R . A 1 LYS 80 79 79 LYS LYS R . A 1 MET 81 80 80 MET MET R . A 1 ILE 82 81 81 ILE ILE R . A 1 PHE 83 82 82 PHE PHE R . A 1 ALA 84 83 83 ALA ALA R . A 1 GLY 85 84 84 GLY GLY R . A 1 ILE 86 85 85 ILE ILE R . A 1 LYS 87 86 86 LYS LYS R . A 1 LYS 88 87 87 LYS LYS R . A 1 LYS 89 88 88 LYS LYS R . A 1 GLY 90 89 89 GLY GLY R . A 1 GLU 91 90 90 GLU GLU R . A 1 ARG 92 91 91 ARG ARG R . A 1 GLN 93 92 92 GLN GLN R . A 1 ASP 94 93 93 ASP ASP R . A 1 LEU 95 94 94 LEU LEU R . A 1 VAL 96 95 95 VAL VAL R . A 1 ALA 97 96 96 ALA ALA R . A 1 TYR 98 97 97 TYR TYR R . A 1 LEU 99 98 98 LEU LEU R . A 1 LYS 100 99 99 LYS LYS R . A 1 SER 101 100 100 SER SER R . A 1 ALA 102 101 101 ALA ALA R . A 1 THR 103 102 102 THR THR R . A 1 SER 104 103 103 SER SER R . B 2 HEM 1 1 1 HEM HEM R . C 3 HOH 1 11 11 HOH HOH R . C 3 HOH 2 1 1 HOH HOH R . C 3 HOH 3 34 34 HOH HOH R . C 3 HOH 4 14 14 HOH HOH R . C 3 HOH 5 12 12 HOH HOH R . C 3 HOH 6 13 13 HOH HOH R . C 3 HOH 7 33 33 HOH HOH R . C 3 HOH 8 15 15 HOH HOH R . C 3 HOH 9 35 35 HOH HOH R . C 3 HOH 10 2 2 HOH HOH R . C 3 HOH 11 16 16 HOH HOH R . C 3 HOH 12 36 36 HOH HOH R . C 3 HOH 13 37 37 HOH HOH R . C 3 HOH 14 18 18 HOH HOH R . C 3 HOH 15 19 19 HOH HOH R . C 3 HOH 16 21 21 HOH HOH R . C 3 HOH 17 3 3 HOH HOH R . C 3 HOH 18 20 20 HOH HOH R . C 3 HOH 19 23 23 HOH HOH R . C 3 HOH 20 24 24 HOH HOH R . C 3 HOH 21 22 22 HOH HOH R . C 3 HOH 22 46 46 HOH HOH R . C 3 HOH 23 25 25 HOH HOH R . C 3 HOH 24 38 38 HOH HOH R . C 3 HOH 25 26 26 HOH HOH R . C 3 HOH 26 39 39 HOH HOH R . C 3 HOH 27 40 40 HOH HOH R . C 3 HOH 28 42 42 HOH HOH R . C 3 HOH 29 43 43 HOH HOH R . C 3 HOH 30 4 4 HOH HOH R . C 3 HOH 31 27 27 HOH HOH R . C 3 HOH 32 30 30 HOH HOH R . C 3 HOH 33 44 44 HOH HOH R . C 3 HOH 34 28 28 HOH HOH R . C 3 HOH 35 29 29 HOH HOH R . C 3 HOH 36 5 5 HOH HOH R . C 3 HOH 37 6 6 HOH HOH R . C 3 HOH 38 7 7 HOH HOH R . C 3 HOH 39 31 31 HOH HOH R . C 3 HOH 40 8 8 HOH HOH R . C 3 HOH 41 32 32 HOH HOH R . C 3 HOH 42 10 10 HOH HOH R . C 3 HOH 43 47 47 HOH HOH R . C 3 HOH 44 48 48 HOH HOH R . C 3 HOH 45 49 49 HOH HOH R . C 3 HOH 46 50 50 HOH HOH R . C 3 HOH 47 51 51 HOH HOH R . C 3 HOH 48 52 52 HOH HOH R . C 3 HOH 49 53 53 HOH HOH R . C 3 HOH 50 54 54 HOH HOH R . C 3 HOH 51 55 55 HOH HOH R . C 3 HOH 52 56 56 HOH HOH R . C 3 HOH 53 57 57 HOH HOH R . C 3 HOH 54 58 58 HOH HOH R . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 1980-09-16 2 'Structure model' 1 1 1989-07-12 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description 1 1 'Structure model' repository 'Initial release' ? 2 2 'Structure model' repository Obsolete ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 C R ILE 85 ? ? N R LYS 86 ? ? 1.28 2 1 C R LYS 55 ? ? N R GLY 56 ? ? 1.28 3 1 C R VAL 11 ? ? N R GLN 12 ? ? 1.29 4 1 C R ALA 43 ? ? N R GLU 44 ? ? 1.30 5 1 C R ASN 22 ? ? N R GLY 23 ? ? 1.30 6 1 C R GLU 44 ? ? N R GLY 45 ? ? 1.30 7 1 C R HIS 26 ? ? N R LYS 27 ? ? 1.30 8 1 C R ASN 70 ? ? N R PRO 71 ? ? 1.30 9 1 C R THR 40 ? ? N R GLY 41 ? ? 1.30 10 1 C R THR 19 ? ? N R VAL 20 ? ? 1.30 11 1 C R PHE 36 ? ? N R GLY 37 ? ? 1.30 12 1 C R LYS 72 ? ? N R LYS 73 ? ? 1.31 13 1 C R ILE 81 ? ? N R PHE 82 ? ? 1.31 14 1 C R TRP 59 ? ? N R ASN 60 ? ? 1.31 15 1 C R TYR 46 ? ? N R SER 47 ? ? 1.31 16 1 C R TYR 67 ? ? N R LEU 68 ? ? 1.31 17 1 C R GLU 21 ? ? N R ASN 22 ? ? 1.31 18 1 C R LYS 39 ? ? N R THR 40 ? ? 1.31 19 1 C R CYS 14 ? ? N R ALA 15 ? ? 1.31 20 1 C R SER 100 ? ? N R ALA 101 ? ? 1.31 21 1 C R LYS 87 ? ? N R LYS 88 ? ? 1.31 22 1 C R GLY 24 ? ? N R LYS 25 ? ? 1.31 23 1 C R ARG 91 ? ? N R GLN 92 ? ? 1.31 24 1 C R PRO 76 ? ? N R GLY 77 ? ? 1.31 25 1 C R ALA 83 ? ? N R GLY 84 ? ? 1.31 26 1 C R ALA 101 ? ? N R THR 102 ? ? 1.31 27 1 C R GLY 37 ? ? N R ARG 38 ? ? 1.31 28 1 C R GLY 34 ? ? N R LEU 35 ? ? 1.31 29 1 C R LYS 53 ? ? N R SER 54 ? ? 1.31 30 1 C R ALA 4 ? ? N R LYS 5 ? ? 1.31 31 1 C R MET 80 ? ? N R ILE 81 ? ? 1.31 32 1 C R VAL 20 ? ? N R GLU 21 ? ? 1.32 33 1 C R THR 63 ? ? N R LEU 64 ? ? 1.32 34 1 C R LEU 64 ? ? N R MET 65 ? ? 1.32 35 1 C R THR 78 ? ? N R LYS 79 ? ? 1.32 36 1 C R SER 47 ? ? N R TYR 48 ? ? 1.32 37 1 C R LYS 5 ? ? N R GLY 6 ? ? 1.32 38 1 C R GLN 16 ? ? N R CYS 17 ? ? 1.32 39 1 C R THR 9 ? ? N R PHE 10 ? ? 1.32 40 1 C R LYS 13 ? ? N R CYS 14 ? ? 1.32 41 1 C R ASP 50 ? ? N R ALA 51 ? ? 1.32 42 1 C R LEU 68 ? ? N R GLU 69 ? ? 1.32 43 1 C R LYS 88 ? ? N R GLY 89 ? ? 1.32 44 1 C R LEU 35 ? ? N R PHE 36 ? ? 1.32 45 1 C R CYS 17 ? ? N R HIS 18 ? ? 1.32 46 1 C R GLY 45 ? ? N R TYR 46 ? ? 1.32 47 1 C R HIS 18 ? ? N R THR 19 ? ? 1.32 48 1 C R LYS 25 ? ? N R HIS 26 ? ? 1.32 49 1 C R PHE 10 ? ? N R VAL 11 ? ? 1.32 50 1 C R TRP 33 ? ? N R GLY 34 ? ? 1.32 51 1 C R GLY 89 ? ? N R GLU 90 ? ? 1.32 52 1 C R ASP 62 ? ? N R THR 63 ? ? 1.32 53 1 C R ALA 51 ? ? N R ASN 52 ? ? 1.32 54 1 C R GLY 6 ? ? N R LYS 7 ? ? 1.32 55 1 C R THR 102 ? ? N R SER 103 ? ? 1.32 56 1 C R ASN 52 ? ? N R LYS 53 ? ? 1.32 57 1 C R GLY 23 ? ? N R GLY 24 ? ? 1.32 58 1 C R GLY 77 ? ? N R THR 78 ? ? 1.32 59 1 C R LYS 99 ? ? N R SER 100 ? ? 1.32 60 1 C R GLN 12 ? ? N R LYS 13 ? ? 1.32 61 1 C R GLU 69 ? ? N R ASN 70 ? ? 1.32 62 1 C R PHE 82 ? ? N R ALA 83 ? ? 1.33 63 1 C R LYS 7 ? ? N R LYS 8 ? ? 1.33 64 1 C R GLU 66 ? ? N R TYR 67 ? ? 1.33 65 1 C R GLY 56 ? ? N R ILE 57 ? ? 1.33 66 1 C R MET 65 ? ? N R GLU 66 ? ? 1.33 67 1 C R PRO 30 ? ? N R ASN 31 ? ? 1.33 68 1 C R TYR 74 ? ? N R ILE 75 ? ? 1.33 69 1 C R VAL 58 ? ? N R TRP 59 ? ? 1.33 70 1 C R ASP 2 ? ? N R VAL 3 ? ? 1.33 71 1 C R TYR 48 ? ? N R THR 49 ? ? 1.33 72 1 C R ALA 96 ? ? N R TYR 97 ? ? 1.33 73 1 C R ASN 31 ? ? N R LEU 32 ? ? 1.33 74 1 C R GLU 90 ? ? N R ARG 91 ? ? 1.33 75 1 C R GLY 29 ? ? N R PRO 30 ? ? 1.33 76 1 C R ASN 61 ? ? N R ASP 62 ? ? 1.33 77 1 C R ILE 75 ? ? N R PRO 76 ? ? 1.33 78 1 C R ALA 15 ? ? N R GLN 16 ? ? 1.33 79 1 C R ASN 60 ? ? N R ASN 61 ? ? 1.33 80 1 C R LYS 86 ? ? N R LYS 87 ? ? 1.33 81 1 C R GLN 42 ? ? N R ALA 43 ? ? 1.33 82 1 C R THR 49 ? ? N R ASP 50 ? ? 1.33 83 1 C R LYS 79 ? ? N R MET 80 ? ? 1.33 84 1 C R VAL 95 ? ? N R ALA 96 ? ? 1.34 85 1 C R LYS 8 ? ? N R THR 9 ? ? 1.34 86 1 C R SER 54 ? ? N R LYS 55 ? ? 1.34 87 1 C R PRO 71 ? ? N R LYS 72 ? ? 1.34 88 1 C R GLY 1 ? ? N R ASP 2 ? ? 1.34 89 1 C R GLY 41 ? ? N R GLN 42 ? ? 1.34 90 1 C R LYS 27 ? ? N R VAL 28 ? ? 1.34 91 1 C R ARG 38 ? ? N R LYS 39 ? ? 1.34 92 1 C R TYR 97 ? ? N R LEU 98 ? ? 1.34 93 1 C R VAL 3 ? ? N R ALA 4 ? ? 1.34 94 1 C R VAL 28 ? ? N R GLY 29 ? ? 1.34 95 1 C R LEU 98 ? ? N R LYS 99 ? ? 1.34 96 1 C R ILE 57 ? ? N R VAL 58 ? ? 1.35 97 1 C R LYS 73 ? ? N R TYR 74 ? ? 1.35 98 1 C R ACE 0 ? ? N R GLY 1 ? ? 1.35 99 1 C R LEU 32 ? ? N R TRP 33 ? ? 1.35 100 1 C R GLY 84 ? ? N R ILE 85 ? ? 1.35 101 1 C R LEU 94 ? ? N R VAL 95 ? ? 1.35 102 1 C R ASP 93 ? ? N R LEU 94 ? ? 1.35 103 1 C R GLN 92 ? ? N R ASP 93 ? ? 1.36 104 1 SG R CYS 17 ? ? CAC R HEM 1 ? ? 1.81 105 1 SG R CYS 14 ? ? CAB R HEM 1 ? ? 1.82 106 1 NE2 R HIS 18 ? ? FE R HEM 1 ? ? 1.97 107 1 O R LYS 55 ? ? N R GLY 56 ? ? 2.19 # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 NZ _pdbx_validate_symm_contact.auth_asym_id_1 R _pdbx_validate_symm_contact.auth_comp_id_1 LYS _pdbx_validate_symm_contact.auth_seq_id_1 88 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 NZ _pdbx_validate_symm_contact.auth_asym_id_2 R _pdbx_validate_symm_contact.auth_comp_id_2 LYS _pdbx_validate_symm_contact.auth_seq_id_2 88 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 2_555 _pdbx_validate_symm_contact.dist 1.18 # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 1 TYR R 48 ? ? 0.082 'SIDE CHAIN' 2 1 TYR R 74 ? ? 0.078 'SIDE CHAIN' 3 1 TYR R 97 ? ? 0.084 'SIDE CHAIN' # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 N 1 R GLY 1 ? OXT ? A GLY 2 OXT 2 1 N 1 R ASP 2 ? OXT ? A ASP 3 OXT 3 1 N 1 R VAL 3 ? OXT ? A VAL 4 OXT 4 1 N 1 R ALA 4 ? OXT ? A ALA 5 OXT 5 1 N 1 R LYS 5 ? OXT ? A LYS 6 OXT 6 1 N 1 R GLY 6 ? OXT ? A GLY 7 OXT 7 1 N 1 R LYS 7 ? OXT ? A LYS 8 OXT 8 1 N 1 R LYS 8 ? OXT ? A LYS 9 OXT 9 1 N 1 R THR 9 ? OXT ? A THR 10 OXT 10 1 N 1 R PHE 10 ? OXT ? A PHE 11 OXT 11 1 N 1 R VAL 11 ? OXT ? A VAL 12 OXT 12 1 N 1 R GLN 12 ? OXT ? A GLN 13 OXT 13 1 N 1 R LYS 13 ? OXT ? A LYS 14 OXT 14 1 N 1 R CYS 14 ? OXT ? A CYS 15 OXT 15 1 N 1 R ALA 15 ? OXT ? A ALA 16 OXT 16 1 N 1 R GLN 16 ? OXT ? A GLN 17 OXT 17 1 N 1 R CYS 17 ? OXT ? A CYS 18 OXT 18 1 N 1 R HIS 18 ? OXT ? A HIS 19 OXT 19 1 N 1 R THR 19 ? OXT ? A THR 20 OXT 20 1 N 1 R VAL 20 ? OXT ? A VAL 21 OXT 21 1 N 1 R GLU 21 ? OXT ? A GLU 22 OXT 22 1 N 1 R ASN 22 ? OXT ? A ASN 23 OXT 23 1 N 1 R GLY 23 ? OXT ? A GLY 24 OXT 24 1 N 1 R GLY 24 ? OXT ? A GLY 25 OXT 25 1 N 1 R LYS 25 ? OXT ? A LYS 26 OXT 26 1 N 1 R HIS 26 ? OXT ? A HIS 27 OXT 27 1 N 1 R LYS 27 ? OXT ? A LYS 28 OXT 28 1 N 1 R VAL 28 ? OXT ? A VAL 29 OXT 29 1 N 1 R GLY 29 ? OXT ? A GLY 30 OXT 30 1 N 1 R PRO 30 ? OXT ? A PRO 31 OXT 31 1 N 1 R ASN 31 ? OXT ? A ASN 32 OXT 32 1 N 1 R LEU 32 ? OXT ? A LEU 33 OXT 33 1 N 1 R TRP 33 ? OXT ? A TRP 34 OXT 34 1 N 1 R GLY 34 ? OXT ? A GLY 35 OXT 35 1 N 1 R LEU 35 ? OXT ? A LEU 36 OXT 36 1 N 1 R PHE 36 ? OXT ? A PHE 37 OXT 37 1 N 1 R GLY 37 ? OXT ? A GLY 38 OXT 38 1 N 1 R ARG 38 ? OXT ? A ARG 39 OXT 39 1 N 1 R LYS 39 ? OXT ? A LYS 40 OXT 40 1 N 1 R THR 40 ? OXT ? A THR 41 OXT 41 1 N 1 R GLY 41 ? OXT ? A GLY 42 OXT 42 1 N 1 R GLN 42 ? OXT ? A GLN 43 OXT 43 1 N 1 R ALA 43 ? OXT ? A ALA 44 OXT 44 1 N 1 R GLU 44 ? OXT ? A GLU 45 OXT 45 1 N 1 R GLY 45 ? OXT ? A GLY 46 OXT 46 1 N 1 R TYR 46 ? OXT ? A TYR 47 OXT 47 1 N 1 R SER 47 ? OXT ? A SER 48 OXT 48 1 N 1 R TYR 48 ? OXT ? A TYR 49 OXT 49 1 N 1 R THR 49 ? OXT ? A THR 50 OXT 50 1 N 1 R ASP 50 ? OXT ? A ASP 51 OXT 51 1 N 1 R ALA 51 ? OXT ? A ALA 52 OXT 52 1 N 1 R ASN 52 ? OXT ? A ASN 53 OXT 53 1 N 1 R LYS 53 ? OXT ? A LYS 54 OXT 54 1 N 1 R SER 54 ? OXT ? A SER 55 OXT 55 1 N 1 R LYS 55 ? OXT ? A LYS 56 OXT 56 1 N 1 R GLY 56 ? OXT ? A GLY 57 OXT 57 1 N 1 R ILE 57 ? OXT ? A ILE 58 OXT 58 1 N 1 R VAL 58 ? OXT ? A VAL 59 OXT 59 1 N 1 R TRP 59 ? OXT ? A TRP 60 OXT 60 1 N 1 R ASN 60 ? OXT ? A ASN 61 OXT 61 1 N 1 R ASN 61 ? OXT ? A ASN 62 OXT 62 1 N 1 R ASP 62 ? OXT ? A ASP 63 OXT 63 1 N 1 R THR 63 ? OXT ? A THR 64 OXT 64 1 N 1 R LEU 64 ? OXT ? A LEU 65 OXT 65 1 N 1 R MET 65 ? OXT ? A MET 66 OXT 66 1 N 1 R GLU 66 ? OXT ? A GLU 67 OXT 67 1 N 1 R TYR 67 ? OXT ? A TYR 68 OXT 68 1 N 1 R LEU 68 ? OXT ? A LEU 69 OXT 69 1 N 1 R GLU 69 ? OXT ? A GLU 70 OXT 70 1 N 1 R ASN 70 ? OXT ? A ASN 71 OXT 71 1 N 1 R PRO 71 ? OXT ? A PRO 72 OXT 72 1 N 1 R LYS 72 ? OXT ? A LYS 73 OXT 73 1 N 1 R LYS 73 ? OXT ? A LYS 74 OXT 74 1 N 1 R TYR 74 ? OXT ? A TYR 75 OXT 75 1 N 1 R ILE 75 ? OXT ? A ILE 76 OXT 76 1 N 1 R PRO 76 ? OXT ? A PRO 77 OXT 77 1 N 1 R GLY 77 ? OXT ? A GLY 78 OXT 78 1 N 1 R THR 78 ? OXT ? A THR 79 OXT 79 1 N 1 R LYS 79 ? OXT ? A LYS 80 OXT 80 1 N 1 R MET 80 ? OXT ? A MET 81 OXT 81 1 N 1 R ILE 81 ? OXT ? A ILE 82 OXT 82 1 N 1 R PHE 82 ? OXT ? A PHE 83 OXT 83 1 N 1 R ALA 83 ? OXT ? A ALA 84 OXT 84 1 N 1 R GLY 84 ? OXT ? A GLY 85 OXT 85 1 N 1 R ILE 85 ? OXT ? A ILE 86 OXT 86 1 N 1 R LYS 86 ? OXT ? A LYS 87 OXT 87 1 N 1 R LYS 87 ? OXT ? A LYS 88 OXT 88 1 N 1 R LYS 88 ? OXT ? A LYS 89 OXT 89 1 N 1 R GLY 89 ? OXT ? A GLY 90 OXT 90 1 N 1 R GLU 90 ? OXT ? A GLU 91 OXT 91 1 N 1 R ARG 91 ? OXT ? A ARG 92 OXT 92 1 N 1 R GLN 92 ? OXT ? A GLN 93 OXT 93 1 N 1 R ASP 93 ? OXT ? A ASP 94 OXT 94 1 N 1 R LEU 94 ? OXT ? A LEU 95 OXT 95 1 N 1 R VAL 95 ? OXT ? A VAL 96 OXT 96 1 N 1 R ALA 96 ? OXT ? A ALA 97 OXT 97 1 N 1 R TYR 97 ? OXT ? A TYR 98 OXT 98 1 N 1 R LEU 98 ? OXT ? A LEU 99 OXT 99 1 N 1 R LYS 99 ? OXT ? A LYS 100 OXT 100 1 N 1 R SER 100 ? OXT ? A SER 101 OXT 101 1 N 1 R ALA 101 ? OXT ? A ALA 102 OXT 102 1 N 1 R THR 102 ? OXT ? A THR 103 OXT 103 1 N 1 R HEM 1 ? NA ? B HEM 1 NA 104 1 N 1 R HEM 1 ? NB ? B HEM 1 NB 105 1 N 1 R HEM 1 ? NC ? B HEM 1 NC 106 1 N 1 R HEM 1 ? ND ? B HEM 1 ND # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 1 'ACETYL GROUP' ACE 2 'PROTOPORPHYRIN IX CONTAINING FE' HEM 3 water HOH #