data_4CYY # _entry.id 4CYY # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.383 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4CYY pdb_00004cyy 10.2210/pdb4cyy/pdb PDBE EBI-60365 ? ? WWPDB D_1290060365 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.content_type _pdbx_database_related.details PDB 4CYF unspecified 'THE STRUCTURE OF VANIN-1: DEFINING THE LINK BETWEEN METABOLIC DISEASE, OXIDATIVE STRESS AND INFLAMMATION' PDB 4CYG unspecified 'THE STRUCTURE OF VANIN-1: DEFINING THE LINK BETWEEN METABOLIC DISEASE, OXIDATIVE STRESS AND INFLAMMATION' PDB 4CYU unspecified 'STAPHYLOCOCCUS AUREUS 7,8-DIHYDRO-6-HYDROXYMETHYLPTERIN- PYROPHOSPHOKINASE IN COMPLEX WITH AMPCPP' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4CYY _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2014-04-16 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Boersma, Y.L.' 1 'Newman, J.' 2 'Adams, T.E.' 3 'Sparrow, L.' 4 'Cowieson, N.' 5 'Lucent, D.' 6 'Krippner, G.' 7 'Bozaoglu, K.' 8 'Peat, T.S.' 9 # _citation.id primary _citation.title 'The Structure of Vanin-1: A Key Enzyme Linking Metabolic Disease and Inflammation' _citation.journal_abbrev 'Acta Crystallogr.,Sect.D' _citation.journal_volume 70 _citation.page_first 3320 _citation.page_last ? _citation.year 2014 _citation.journal_id_ASTM ABCRE6 _citation.country DK _citation.journal_id_ISSN 0907-4449 _citation.journal_id_CSD 0766 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 25478849 _citation.pdbx_database_id_DOI 10.1107/S1399004714022767 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Boersma, Y.L.' 1 ? primary 'Newman, J.' 2 ? primary 'Adams, T.E.' 3 ? primary 'Cowieson, N.' 4 ? primary 'Krippner, G.' 5 ? primary 'Bozaoglu, K.' 6 ? primary 'Peat, T.S.' 7 ? # _cell.entry_id 4CYY _cell.length_a 101.904 _cell.length_b 101.904 _cell.length_c 133.652 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4CYY _symmetry.space_group_name_H-M 'P 32 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man PANTETHEINASE 56325.219 1 3.5.1.92 ? ? 'FLAG-TAG AT THE N-TERMINUS AND PRO-PEPTIDE AT THE C-TERMINUS HAS BEEN REMOVED TO GIVE THE MATURE FORM OF THE PROTEIN.' 2 branched man '2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose' 424.401 1 ? ? ? ? 3 non-polymer man 2-acetamido-2-deoxy-beta-D-glucopyranose 221.208 4 ? ? ? ? 4 water nat water 18.015 11 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'PANTETHEINE HYDROLASE, TIFF66, VASCULAR NON-INFLAMMATORY MOLECULE 1, VANIN-1' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;ASISARDYKDDDDKQDTFIAAVYEHAAILPNATLTPVSREEALALMNRNLDILEGAITSAADQGAHIIVTPEDAIYGWNF NRDSLYPYLEDIPDPEVNWIPCNNRNRFGQTPVQERLSCLAKNNSIYVVANIGDKKPCDTSDPQCPPDGRYQYNTDVVFD SQGKLVARYHKQNLFMGENQFNVPKEPEIVTFNTTFGSFGIFTCFDILFHDPAVTLVKDFHVDTIVFPTAWMNVLPHLSA VEFHSAWAMGMRVNFLASNIHYPSKKMTGSGIYAPNSSRAFHYDMKTEEGKLLLSQLDSHPSHSAVVNWTSYASSIEALS SGNKEFKGTVFFDEFTFVKLTGVAGNYTVCQKDLCCHLSYKMSENIPNEVYALGAFDGLHTVEGRYYLQICTLLKCKTTN LNTCGDSAETASTRFEMFSLSGTFGTQYVFPEVLLSENQLAPGEFQVSTDGRLFSLKPTSGPVLTVTLFGRLYEKDWASN ASSGLTAQARIIMLIVIAPIVCSLSW ; _entity_poly.pdbx_seq_one_letter_code_can ;ASISARDYKDDDDKQDTFIAAVYEHAAILPNATLTPVSREEALALMNRNLDILEGAITSAADQGAHIIVTPEDAIYGWNF NRDSLYPYLEDIPDPEVNWIPCNNRNRFGQTPVQERLSCLAKNNSIYVVANIGDKKPCDTSDPQCPPDGRYQYNTDVVFD SQGKLVARYHKQNLFMGENQFNVPKEPEIVTFNTTFGSFGIFTCFDILFHDPAVTLVKDFHVDTIVFPTAWMNVLPHLSA VEFHSAWAMGMRVNFLASNIHYPSKKMTGSGIYAPNSSRAFHYDMKTEEGKLLLSQLDSHPSHSAVVNWTSYASSIEALS SGNKEFKGTVFFDEFTFVKLTGVAGNYTVCQKDLCCHLSYKMSENIPNEVYALGAFDGLHTVEGRYYLQICTLLKCKTTN LNTCGDSAETASTRFEMFSLSGTFGTQYVFPEVLLSENQLAPGEFQVSTDGRLFSLKPTSGPVLTVTLFGRLYEKDWASN ASSGLTAQARIIMLIVIAPIVCSLSW ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ALA n 1 2 SER n 1 3 ILE n 1 4 SER n 1 5 ALA n 1 6 ARG n 1 7 ASP n 1 8 TYR n 1 9 LYS n 1 10 ASP n 1 11 ASP n 1 12 ASP n 1 13 ASP n 1 14 LYS n 1 15 GLN n 1 16 ASP n 1 17 THR n 1 18 PHE n 1 19 ILE n 1 20 ALA n 1 21 ALA n 1 22 VAL n 1 23 TYR n 1 24 GLU n 1 25 HIS n 1 26 ALA n 1 27 ALA n 1 28 ILE n 1 29 LEU n 1 30 PRO n 1 31 ASN n 1 32 ALA n 1 33 THR n 1 34 LEU n 1 35 THR n 1 36 PRO n 1 37 VAL n 1 38 SER n 1 39 ARG n 1 40 GLU n 1 41 GLU n 1 42 ALA n 1 43 LEU n 1 44 ALA n 1 45 LEU n 1 46 MET n 1 47 ASN n 1 48 ARG n 1 49 ASN n 1 50 LEU n 1 51 ASP n 1 52 ILE n 1 53 LEU n 1 54 GLU n 1 55 GLY n 1 56 ALA n 1 57 ILE n 1 58 THR n 1 59 SER n 1 60 ALA n 1 61 ALA n 1 62 ASP n 1 63 GLN n 1 64 GLY n 1 65 ALA n 1 66 HIS n 1 67 ILE n 1 68 ILE n 1 69 VAL n 1 70 THR n 1 71 PRO n 1 72 GLU n 1 73 ASP n 1 74 ALA n 1 75 ILE n 1 76 TYR n 1 77 GLY n 1 78 TRP n 1 79 ASN n 1 80 PHE n 1 81 ASN n 1 82 ARG n 1 83 ASP n 1 84 SER n 1 85 LEU n 1 86 TYR n 1 87 PRO n 1 88 TYR n 1 89 LEU n 1 90 GLU n 1 91 ASP n 1 92 ILE n 1 93 PRO n 1 94 ASP n 1 95 PRO n 1 96 GLU n 1 97 VAL n 1 98 ASN n 1 99 TRP n 1 100 ILE n 1 101 PRO n 1 102 CYS n 1 103 ASN n 1 104 ASN n 1 105 ARG n 1 106 ASN n 1 107 ARG n 1 108 PHE n 1 109 GLY n 1 110 GLN n 1 111 THR n 1 112 PRO n 1 113 VAL n 1 114 GLN n 1 115 GLU n 1 116 ARG n 1 117 LEU n 1 118 SER n 1 119 CYS n 1 120 LEU n 1 121 ALA n 1 122 LYS n 1 123 ASN n 1 124 ASN n 1 125 SER n 1 126 ILE n 1 127 TYR n 1 128 VAL n 1 129 VAL n 1 130 ALA n 1 131 ASN n 1 132 ILE n 1 133 GLY n 1 134 ASP n 1 135 LYS n 1 136 LYS n 1 137 PRO n 1 138 CYS n 1 139 ASP n 1 140 THR n 1 141 SER n 1 142 ASP n 1 143 PRO n 1 144 GLN n 1 145 CYS n 1 146 PRO n 1 147 PRO n 1 148 ASP n 1 149 GLY n 1 150 ARG n 1 151 TYR n 1 152 GLN n 1 153 TYR n 1 154 ASN n 1 155 THR n 1 156 ASP n 1 157 VAL n 1 158 VAL n 1 159 PHE n 1 160 ASP n 1 161 SER n 1 162 GLN n 1 163 GLY n 1 164 LYS n 1 165 LEU n 1 166 VAL n 1 167 ALA n 1 168 ARG n 1 169 TYR n 1 170 HIS n 1 171 LYS n 1 172 GLN n 1 173 ASN n 1 174 LEU n 1 175 PHE n 1 176 MET n 1 177 GLY n 1 178 GLU n 1 179 ASN n 1 180 GLN n 1 181 PHE n 1 182 ASN n 1 183 VAL n 1 184 PRO n 1 185 LYS n 1 186 GLU n 1 187 PRO n 1 188 GLU n 1 189 ILE n 1 190 VAL n 1 191 THR n 1 192 PHE n 1 193 ASN n 1 194 THR n 1 195 THR n 1 196 PHE n 1 197 GLY n 1 198 SER n 1 199 PHE n 1 200 GLY n 1 201 ILE n 1 202 PHE n 1 203 THR n 1 204 CYS n 1 205 PHE n 1 206 ASP n 1 207 ILE n 1 208 LEU n 1 209 PHE n 1 210 HIS n 1 211 ASP n 1 212 PRO n 1 213 ALA n 1 214 VAL n 1 215 THR n 1 216 LEU n 1 217 VAL n 1 218 LYS n 1 219 ASP n 1 220 PHE n 1 221 HIS n 1 222 VAL n 1 223 ASP n 1 224 THR n 1 225 ILE n 1 226 VAL n 1 227 PHE n 1 228 PRO n 1 229 THR n 1 230 ALA n 1 231 TRP n 1 232 MET n 1 233 ASN n 1 234 VAL n 1 235 LEU n 1 236 PRO n 1 237 HIS n 1 238 LEU n 1 239 SER n 1 240 ALA n 1 241 VAL n 1 242 GLU n 1 243 PHE n 1 244 HIS n 1 245 SER n 1 246 ALA n 1 247 TRP n 1 248 ALA n 1 249 MET n 1 250 GLY n 1 251 MET n 1 252 ARG n 1 253 VAL n 1 254 ASN n 1 255 PHE n 1 256 LEU n 1 257 ALA n 1 258 SER n 1 259 ASN n 1 260 ILE n 1 261 HIS n 1 262 TYR n 1 263 PRO n 1 264 SER n 1 265 LYS n 1 266 LYS n 1 267 MET n 1 268 THR n 1 269 GLY n 1 270 SER n 1 271 GLY n 1 272 ILE n 1 273 TYR n 1 274 ALA n 1 275 PRO n 1 276 ASN n 1 277 SER n 1 278 SER n 1 279 ARG n 1 280 ALA n 1 281 PHE n 1 282 HIS n 1 283 TYR n 1 284 ASP n 1 285 MET n 1 286 LYS n 1 287 THR n 1 288 GLU n 1 289 GLU n 1 290 GLY n 1 291 LYS n 1 292 LEU n 1 293 LEU n 1 294 LEU n 1 295 SER n 1 296 GLN n 1 297 LEU n 1 298 ASP n 1 299 SER n 1 300 HIS n 1 301 PRO n 1 302 SER n 1 303 HIS n 1 304 SER n 1 305 ALA n 1 306 VAL n 1 307 VAL n 1 308 ASN n 1 309 TRP n 1 310 THR n 1 311 SER n 1 312 TYR n 1 313 ALA n 1 314 SER n 1 315 SER n 1 316 ILE n 1 317 GLU n 1 318 ALA n 1 319 LEU n 1 320 SER n 1 321 SER n 1 322 GLY n 1 323 ASN n 1 324 LYS n 1 325 GLU n 1 326 PHE n 1 327 LYS n 1 328 GLY n 1 329 THR n 1 330 VAL n 1 331 PHE n 1 332 PHE n 1 333 ASP n 1 334 GLU n 1 335 PHE n 1 336 THR n 1 337 PHE n 1 338 VAL n 1 339 LYS n 1 340 LEU n 1 341 THR n 1 342 GLY n 1 343 VAL n 1 344 ALA n 1 345 GLY n 1 346 ASN n 1 347 TYR n 1 348 THR n 1 349 VAL n 1 350 CYS n 1 351 GLN n 1 352 LYS n 1 353 ASP n 1 354 LEU n 1 355 CYS n 1 356 CYS n 1 357 HIS n 1 358 LEU n 1 359 SER n 1 360 TYR n 1 361 LYS n 1 362 MET n 1 363 SER n 1 364 GLU n 1 365 ASN n 1 366 ILE n 1 367 PRO n 1 368 ASN n 1 369 GLU n 1 370 VAL n 1 371 TYR n 1 372 ALA n 1 373 LEU n 1 374 GLY n 1 375 ALA n 1 376 PHE n 1 377 ASP n 1 378 GLY n 1 379 LEU n 1 380 HIS n 1 381 THR n 1 382 VAL n 1 383 GLU n 1 384 GLY n 1 385 ARG n 1 386 TYR n 1 387 TYR n 1 388 LEU n 1 389 GLN n 1 390 ILE n 1 391 CYS n 1 392 THR n 1 393 LEU n 1 394 LEU n 1 395 LYS n 1 396 CYS n 1 397 LYS n 1 398 THR n 1 399 THR n 1 400 ASN n 1 401 LEU n 1 402 ASN n 1 403 THR n 1 404 CYS n 1 405 GLY n 1 406 ASP n 1 407 SER n 1 408 ALA n 1 409 GLU n 1 410 THR n 1 411 ALA n 1 412 SER n 1 413 THR n 1 414 ARG n 1 415 PHE n 1 416 GLU n 1 417 MET n 1 418 PHE n 1 419 SER n 1 420 LEU n 1 421 SER n 1 422 GLY n 1 423 THR n 1 424 PHE n 1 425 GLY n 1 426 THR n 1 427 GLN n 1 428 TYR n 1 429 VAL n 1 430 PHE n 1 431 PRO n 1 432 GLU n 1 433 VAL n 1 434 LEU n 1 435 LEU n 1 436 SER n 1 437 GLU n 1 438 ASN n 1 439 GLN n 1 440 LEU n 1 441 ALA n 1 442 PRO n 1 443 GLY n 1 444 GLU n 1 445 PHE n 1 446 GLN n 1 447 VAL n 1 448 SER n 1 449 THR n 1 450 ASP n 1 451 GLY n 1 452 ARG n 1 453 LEU n 1 454 PHE n 1 455 SER n 1 456 LEU n 1 457 LYS n 1 458 PRO n 1 459 THR n 1 460 SER n 1 461 GLY n 1 462 PRO n 1 463 VAL n 1 464 LEU n 1 465 THR n 1 466 VAL n 1 467 THR n 1 468 LEU n 1 469 PHE n 1 470 GLY n 1 471 ARG n 1 472 LEU n 1 473 TYR n 1 474 GLU n 1 475 LYS n 1 476 ASP n 1 477 TRP n 1 478 ALA n 1 479 SER n 1 480 ASN n 1 481 ALA n 1 482 SER n 1 483 SER n 1 484 GLY n 1 485 LEU n 1 486 THR n 1 487 ALA n 1 488 GLN n 1 489 ALA n 1 490 ARG n 1 491 ILE n 1 492 ILE n 1 493 MET n 1 494 LEU n 1 495 ILE n 1 496 VAL n 1 497 ILE n 1 498 ALA n 1 499 PRO n 1 500 ILE n 1 501 VAL n 1 502 CYS n 1 503 SER n 1 504 LEU n 1 505 SER n 1 506 TRP n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name HUMAN _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'HOMO SAPIENS' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name HUMAN _entity_src_gen.pdbx_host_org_scientific_name 'HOMO SAPIENS' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 9606 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line HEK293 _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector PAPEX-3P _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code VNN1_HUMAN _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_db_accession O95497 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4CYY _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 20 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 506 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession O95497 _struct_ref_seq.db_align_beg 27 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 513 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 27 _struct_ref_seq.pdbx_auth_seq_align_end 513 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4CYY ALA A 1 ? UNP O95497 ? ? 'expression tag' 8 1 1 4CYY SER A 2 ? UNP O95497 ? ? 'expression tag' 9 2 1 4CYY ILE A 3 ? UNP O95497 ? ? 'expression tag' 10 3 1 4CYY SER A 4 ? UNP O95497 ? ? 'expression tag' 11 4 1 4CYY ALA A 5 ? UNP O95497 ? ? 'expression tag' 12 5 1 4CYY ARG A 6 ? UNP O95497 ? ? 'expression tag' 13 6 1 4CYY ASP A 7 ? UNP O95497 ? ? 'expression tag' 14 7 1 4CYY TYR A 8 ? UNP O95497 ? ? 'expression tag' 15 8 1 4CYY LYS A 9 ? UNP O95497 ? ? 'expression tag' 16 9 1 4CYY ASP A 10 ? UNP O95497 ? ? 'expression tag' 17 10 1 4CYY ASP A 11 ? UNP O95497 ? ? 'expression tag' 18 11 1 4CYY ASP A 12 ? UNP O95497 ? ? 'expression tag' 19 12 1 4CYY ASP A 13 ? UNP O95497 ? ? 'expression tag' 20 13 1 4CYY LYS A 14 ? UNP O95497 ? ? 'expression tag' 21 14 1 4CYY GLN A 15 ? UNP O95497 ? ? 'expression tag' 22 15 1 4CYY ASP A 16 ? UNP O95497 ? ? 'expression tag' 23 16 1 4CYY THR A 17 ? UNP O95497 ? ? 'expression tag' 24 17 1 4CYY PHE A 18 ? UNP O95497 ? ? 'expression tag' 25 18 1 4CYY ILE A 19 ? UNP O95497 ? ? 'expression tag' 26 19 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NAG 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-glucopyranose ;N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE ; 'C8 H15 N O6' 221.208 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 4CYY _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 3.91 _exptl_crystal.density_percent_sol 68.6 _exptl_crystal.description NONE # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details ;THE PROTEIN WAS AT 15 MG/ML. THE RESERVOIR CONDITIONS WERE 25% (W/V) PEG 1500 PLUS 10% (V/V) SUCCINATE-PHOSPHATE-GLYCINE BUFFER AT PH 6.0. THE PLATES WERE SET UP AT 8 C AND THE DROPS WERE 150 NL PLUS 150 NL IN SITTING DROP PLATES. ; # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC CCD' _diffrn_detector.pdbx_collection_date 2013-11-07 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.95370 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'AUSTRALIAN SYNCHROTRON BEAMLINE MX2' _diffrn_source.pdbx_synchrotron_site 'Australian Synchrotron' _diffrn_source.pdbx_synchrotron_beamline MX2 _diffrn_source.pdbx_wavelength 0.95370 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 4CYY _reflns.observed_criterion_sigma_I 0.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 47.60 _reflns.d_resolution_high 2.89 _reflns.number_obs 18526 _reflns.number_all ? _reflns.percent_possible_obs 99.7 _reflns.pdbx_Rmerge_I_obs 0.21 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 14.50 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 16.3 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 2.89 _reflns_shell.d_res_low 3.04 _reflns_shell.percent_possible_all 97.9 _reflns_shell.Rmerge_I_obs 1.12 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 2.70 _reflns_shell.pdbx_redundancy 16.1 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 4CYY _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 17545 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F . _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 88.25 _refine.ls_d_res_high 2.89 _refine.ls_percent_reflns_obs 99.62 _refine.ls_R_factor_obs 0.17646 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.17425 _refine.ls_R_factor_R_free 0.21883 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.1 _refine.ls_number_reflns_R_free 947 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.955 _refine.correlation_coeff_Fo_to_Fc_free 0.935 _refine.B_iso_mean 61.539 _refine.aniso_B[1][1] 2.84 _refine.aniso_B[2][2] 2.84 _refine.aniso_B[3][3] -9.23 _refine.aniso_B[1][2] 1.42 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. U VALUES REFINED INDIVIDUALLY.' _refine.pdbx_starting_model 'PDB ENTRY 4CYF' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.600 _refine.pdbx_overall_ESU_R_Free 0.296 _refine.overall_SU_ML 0.231 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 13.219 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 3615 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 84 _refine_hist.number_atoms_solvent 11 _refine_hist.number_atoms_total 3710 _refine_hist.d_res_high 2.89 _refine_hist.d_res_low 88.25 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.008 0.019 ? 3803 'X-RAY DIFFRACTION' ? r_bond_other_d 0.001 0.020 ? 3459 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.322 1.970 ? 5184 'X-RAY DIFFRACTION' ? r_angle_other_deg 0.710 3.000 ? 7953 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 7.031 5.000 ? 459 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 36.198 24.682 ? 173 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 15.288 15.000 ? 583 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 18.372 15.000 ? 13 'X-RAY DIFFRACTION' ? r_chiral_restr 0.064 0.200 ? 585 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.005 0.021 ? 4293 'X-RAY DIFFRACTION' ? r_gen_planes_other 0.001 0.020 ? 876 'X-RAY DIFFRACTION' ? r_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 2.677 5.844 ? 1842 'X-RAY DIFFRACTION' ? r_mcbond_other 2.675 5.843 ? 1841 'X-RAY DIFFRACTION' ? r_mcangle_it 4.309 8.760 ? 2299 'X-RAY DIFFRACTION' ? r_mcangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scbond_it 3.816 6.527 ? 1961 'X-RAY DIFFRACTION' ? r_scbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.887 _refine_ls_shell.d_res_low 2.962 _refine_ls_shell.number_reflns_R_work 1226 _refine_ls_shell.R_factor_R_work 0.310 _refine_ls_shell.percent_reflns_obs 95.75 _refine_ls_shell.R_factor_R_free 0.388 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 80 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # _struct.entry_id 4CYY _struct.title 'The structure of vanin-1: defining the link between metabolic disease, oxidative stress and inflammation' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4CYY _struct_keywords.pdbx_keywords HYDROLASE _struct_keywords.text 'HYDROLASE, INFLAMMATION, OXIDATIVE STRESS, METABOLIC DISEASE, COA BIOSYNTHESIS' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 3 ? F N N 3 ? G N N 4 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 38 ? ASP A 62 ? SER A 45 ASP A 69 1 ? 25 HELX_P HELX_P2 2 ASN A 81 ? TYR A 86 ? ASN A 88 TYR A 93 1 ? 6 HELX_P HELX_P3 3 PRO A 87 ? LEU A 89 ? PRO A 94 LEU A 96 5 ? 3 HELX_P HELX_P4 4 ASP A 94 ? ASN A 98 ? ASP A 101 ASN A 105 5 ? 5 HELX_P HELX_P5 5 THR A 111 ? ASN A 124 ? THR A 118 ASN A 131 1 ? 14 HELX_P HELX_P6 6 THR A 203 ? PHE A 209 ? THR A 210 PHE A 216 5 ? 7 HELX_P HELX_P7 7 PRO A 212 ? ASP A 219 ? PRO A 219 ASP A 226 1 ? 8 HELX_P HELX_P8 8 SER A 239 ? ARG A 252 ? SER A 246 ARG A 259 1 ? 14 HELX_P HELX_P9 9 PRO A 263 ? LYS A 266 ? PRO A 270 LYS A 273 5 ? 4 HELX_P HELX_P10 10 THR A 310 ? SER A 315 ? THR A 317 SER A 322 1 ? 6 HELX_P HELX_P11 11 ASN A 400 ? CYS A 404 ? ASN A 407 CYS A 411 5 ? 5 HELX_P HELX_P12 12 TYR A 473 ? ASP A 476 ? TYR A 480 ASP A 483 5 ? 4 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 102 SG ? ? ? 1_555 A CYS 119 SG ? ? A CYS 109 A CYS 126 1_555 ? ? ? ? ? ? ? 2.076 ? ? disulf2 disulf ? ? A CYS 138 SG ? ? ? 1_555 A CYS 145 SG ? ? A CYS 145 A CYS 152 1_555 ? ? ? ? ? ? ? 2.060 ? ? disulf3 disulf ? ? A CYS 356 SG ? ? ? 1_555 A CYS 391 SG ? ? A CYS 363 A CYS 398 1_555 ? ? ? ? ? ? ? 2.048 ? ? disulf4 disulf ? ? A CYS 396 SG ? ? ? 1_555 A CYS 404 SG ? ? A CYS 403 A CYS 411 1_555 ? ? ? ? ? ? ? 2.047 ? ? covale1 covale one ? A ASN 31 ND2 ? ? ? 1_555 E NAG . C1 ? ? A ASN 38 A NAG 532 1_555 ? ? ? ? ? ? ? 1.460 ? N-Glycosylation covale2 covale one ? A ASN 123 ND2 ? ? ? 1_555 F NAG . C1 ? ? A ASN 130 A NAG 533 1_555 ? ? ? ? ? ? ? 1.456 ? N-Glycosylation covale3 covale one ? A ASN 193 ND2 ? ? ? 1_555 B NAG . C1 ? ? A ASN 200 B NAG 1 1_555 ? ? ? ? ? ? ? 1.431 ? N-Glycosylation covale4 covale one ? A ASN 308 ND2 ? ? ? 1_555 C NAG . C1 ? ? A ASN 315 A NAG 522 1_555 ? ? ? ? ? ? ? 1.460 ? N-Glycosylation covale5 covale one ? A ASN 346 ND2 ? ? ? 1_555 D NAG . C1 ? ? A ASN 353 A NAG 525 1_555 ? ? ? ? ? ? ? 1.440 ? N-Glycosylation covale6 covale both ? B NAG . O4 ? ? ? 1_555 B NAG . C1 ? ? B NAG 1 B NAG 2 1_555 ? ? ? ? ? ? ? 1.445 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 ASN 104 A . ? ASN 111 A ARG 105 A ? ARG 112 A 1 -5.21 2 ASP 211 A . ? ASP 218 A PRO 212 A ? PRO 219 A 1 1.50 3 LEU 235 A . ? LEU 242 A PRO 236 A ? PRO 243 A 1 -0.64 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA ? 6 ? AB ? 6 ? AC ? 6 ? AD ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA 1 2 ? anti-parallel AA 2 3 ? anti-parallel AA 3 4 ? parallel AA 4 5 ? parallel AA 5 6 ? anti-parallel AB 1 2 ? anti-parallel AB 2 3 ? parallel AB 3 4 ? parallel AB 4 5 ? anti-parallel AB 5 6 ? anti-parallel AC 1 2 ? anti-parallel AC 2 3 ? anti-parallel AC 3 4 ? anti-parallel AC 4 5 ? anti-parallel AC 5 6 ? anti-parallel AD 1 2 ? anti-parallel AD 2 3 ? anti-parallel AD 3 4 ? anti-parallel AD 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA 1 LEU A 165 ? HIS A 170 ? LEU A 172 HIS A 177 AA 2 ARG A 150 ? PHE A 159 ? ARG A 157 PHE A 166 AA 3 TYR A 127 ? PRO A 137 ? TYR A 134 PRO A 144 AA 4 ILE A 67 ? VAL A 69 ? ILE A 74 VAL A 76 AA 5 THR A 17 ? GLU A 24 ? THR A 24 GLU A 31 AA 6 LYS A 291 ? ASP A 298 ? LYS A 298 ASP A 305 AB 1 THR A 191 ? THR A 194 ? THR A 198 THR A 201 AB 2 GLY A 197 ? ILE A 201 ? GLY A 204 ILE A 208 AB 3 THR A 224 ? PRO A 228 ? THR A 231 PRO A 235 AB 4 ASN A 254 ? SER A 258 ? ASN A 261 SER A 265 AB 5 SER A 270 ? TYR A 273 ? SER A 277 TYR A 280 AB 6 SER A 278 ? HIS A 282 ? SER A 285 HIS A 289 AC 1 GLU A 325 ? VAL A 330 ? GLU A 332 VAL A 337 AC 2 ASP A 333 ? LEU A 340 ? ASP A 340 LEU A 347 AC 3 TYR A 371 ? HIS A 380 ? TYR A 378 HIS A 387 AC 4 TYR A 386 ? LYS A 395 ? TYR A 393 LYS A 402 AC 5 VAL A 463 ? ARG A 471 ? VAL A 470 ARG A 478 AC 6 VAL A 429 ? LEU A 435 ? VAL A 436 LEU A 442 AD 1 ALA A 344 ? GLN A 351 ? ALA A 351 GLN A 358 AD 2 LEU A 354 ? MET A 362 ? LEU A 361 MET A 369 AD 3 PHE A 415 ? GLY A 422 ? PHE A 422 GLY A 429 AD 4 LEU A 453 ? SER A 455 ? LEU A 460 SER A 462 AD 5 PHE A 445 ? VAL A 447 ? PHE A 452 VAL A 454 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA 1 2 N TYR A 169 ? N TYR A 176 O ASP A 156 ? O ASP A 163 AA 2 3 N PHE A 159 ? N PHE A 166 O VAL A 128 ? O VAL A 135 AA 3 4 N VAL A 129 ? N VAL A 136 O ILE A 68 ? O ILE A 75 AA 4 5 N VAL A 69 ? N VAL A 76 O ALA A 21 ? O ALA A 28 AA 5 6 N GLU A 24 ? N GLU A 31 O LYS A 291 ? O LYS A 298 AB 1 2 N THR A 194 ? N THR A 201 O GLY A 197 ? O GLY A 204 AB 2 3 N GLY A 200 ? N GLY A 207 O THR A 224 ? O THR A 231 AB 3 4 N ILE A 225 ? N ILE A 232 O ASN A 254 ? O ASN A 261 AB 4 5 N ALA A 257 ? N ALA A 264 O GLY A 271 ? O GLY A 278 AB 5 6 O ILE A 272 ? O ILE A 279 N ARG A 279 ? N ARG A 286 AC 1 2 N VAL A 330 ? N VAL A 337 O ASP A 333 ? O ASP A 340 AC 2 3 N LEU A 340 ? N LEU A 347 O TYR A 371 ? O TYR A 378 AC 3 4 N HIS A 380 ? N HIS A 387 O TYR A 386 ? O TYR A 393 AC 4 5 N LYS A 395 ? N LYS A 402 O LEU A 464 ? O LEU A 471 AC 5 6 N PHE A 469 ? N PHE A 476 O PHE A 430 ? O PHE A 437 AD 1 2 N GLN A 351 ? N GLN A 358 O LEU A 354 ? O LEU A 361 AD 2 3 O LYS A 361 ? O LYS A 368 N GLU A 416 ? N GLU A 423 AD 3 4 N LEU A 420 ? N LEU A 427 O LEU A 453 ? O LEU A 460 AD 4 5 N PHE A 454 ? N PHE A 461 O GLN A 446 ? O GLN A 453 # _database_PDB_matrix.entry_id 4CYY _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 4CYY _atom_sites.fract_transf_matrix[1][1] 0.009813 _atom_sites.fract_transf_matrix[1][2] 0.005666 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.011331 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.007482 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _database_PDB_caveat.id _database_PDB_caveat.text 1 'NAG B 1 HAS WRONG CHIRALITY AT ATOM C1' 2 'NAG A 532 HAS WRONG CHIRALITY AT ATOM C1' # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ALA 1 8 ? ? ? A . n A 1 2 SER 2 9 ? ? ? A . n A 1 3 ILE 3 10 ? ? ? A . n A 1 4 SER 4 11 ? ? ? A . n A 1 5 ALA 5 12 ? ? ? A . n A 1 6 ARG 6 13 ? ? ? A . n A 1 7 ASP 7 14 ? ? ? A . n A 1 8 TYR 8 15 ? ? ? A . n A 1 9 LYS 9 16 ? ? ? A . n A 1 10 ASP 10 17 ? ? ? A . n A 1 11 ASP 11 18 ? ? ? A . n A 1 12 ASP 12 19 ? ? ? A . n A 1 13 ASP 13 20 20 ASP ASP A . n A 1 14 LYS 14 21 21 LYS LYS A . n A 1 15 GLN 15 22 22 GLN GLN A . n A 1 16 ASP 16 23 23 ASP ASP A . n A 1 17 THR 17 24 24 THR THR A . n A 1 18 PHE 18 25 25 PHE PHE A . n A 1 19 ILE 19 26 26 ILE ILE A . n A 1 20 ALA 20 27 27 ALA ALA A . n A 1 21 ALA 21 28 28 ALA ALA A . n A 1 22 VAL 22 29 29 VAL VAL A . n A 1 23 TYR 23 30 30 TYR TYR A . n A 1 24 GLU 24 31 31 GLU GLU A . n A 1 25 HIS 25 32 32 HIS HIS A . n A 1 26 ALA 26 33 33 ALA ALA A . n A 1 27 ALA 27 34 34 ALA ALA A . n A 1 28 ILE 28 35 35 ILE ILE A . n A 1 29 LEU 29 36 36 LEU LEU A . n A 1 30 PRO 30 37 37 PRO PRO A . n A 1 31 ASN 31 38 38 ASN ASN A . n A 1 32 ALA 32 39 39 ALA ALA A . n A 1 33 THR 33 40 40 THR THR A . n A 1 34 LEU 34 41 41 LEU LEU A . n A 1 35 THR 35 42 42 THR THR A . n A 1 36 PRO 36 43 43 PRO PRO A . n A 1 37 VAL 37 44 44 VAL VAL A . n A 1 38 SER 38 45 45 SER SER A . n A 1 39 ARG 39 46 46 ARG ARG A . n A 1 40 GLU 40 47 47 GLU GLU A . n A 1 41 GLU 41 48 48 GLU GLU A . n A 1 42 ALA 42 49 49 ALA ALA A . n A 1 43 LEU 43 50 50 LEU LEU A . n A 1 44 ALA 44 51 51 ALA ALA A . n A 1 45 LEU 45 52 52 LEU LEU A . n A 1 46 MET 46 53 53 MET MET A . n A 1 47 ASN 47 54 54 ASN ASN A . n A 1 48 ARG 48 55 55 ARG ARG A . n A 1 49 ASN 49 56 56 ASN ASN A . n A 1 50 LEU 50 57 57 LEU LEU A . n A 1 51 ASP 51 58 58 ASP ASP A . n A 1 52 ILE 52 59 59 ILE ILE A . n A 1 53 LEU 53 60 60 LEU LEU A . n A 1 54 GLU 54 61 61 GLU GLU A . n A 1 55 GLY 55 62 62 GLY GLY A . n A 1 56 ALA 56 63 63 ALA ALA A . n A 1 57 ILE 57 64 64 ILE ILE A . n A 1 58 THR 58 65 65 THR THR A . n A 1 59 SER 59 66 66 SER SER A . n A 1 60 ALA 60 67 67 ALA ALA A . n A 1 61 ALA 61 68 68 ALA ALA A . n A 1 62 ASP 62 69 69 ASP ASP A . n A 1 63 GLN 63 70 70 GLN GLN A . n A 1 64 GLY 64 71 71 GLY GLY A . n A 1 65 ALA 65 72 72 ALA ALA A . n A 1 66 HIS 66 73 73 HIS HIS A . n A 1 67 ILE 67 74 74 ILE ILE A . n A 1 68 ILE 68 75 75 ILE ILE A . n A 1 69 VAL 69 76 76 VAL VAL A . n A 1 70 THR 70 77 77 THR THR A . n A 1 71 PRO 71 78 78 PRO PRO A . n A 1 72 GLU 72 79 79 GLU GLU A . n A 1 73 ASP 73 80 80 ASP ASP A . n A 1 74 ALA 74 81 81 ALA ALA A . n A 1 75 ILE 75 82 82 ILE ILE A . n A 1 76 TYR 76 83 83 TYR TYR A . n A 1 77 GLY 77 84 84 GLY GLY A . n A 1 78 TRP 78 85 85 TRP TRP A . n A 1 79 ASN 79 86 86 ASN ASN A . n A 1 80 PHE 80 87 87 PHE PHE A . n A 1 81 ASN 81 88 88 ASN ASN A . n A 1 82 ARG 82 89 89 ARG ARG A . n A 1 83 ASP 83 90 90 ASP ASP A . n A 1 84 SER 84 91 91 SER SER A . n A 1 85 LEU 85 92 92 LEU LEU A . n A 1 86 TYR 86 93 93 TYR TYR A . n A 1 87 PRO 87 94 94 PRO PRO A . n A 1 88 TYR 88 95 95 TYR TYR A . n A 1 89 LEU 89 96 96 LEU LEU A . n A 1 90 GLU 90 97 97 GLU GLU A . n A 1 91 ASP 91 98 98 ASP ASP A . n A 1 92 ILE 92 99 99 ILE ILE A . n A 1 93 PRO 93 100 100 PRO PRO A . n A 1 94 ASP 94 101 101 ASP ASP A . n A 1 95 PRO 95 102 102 PRO PRO A . n A 1 96 GLU 96 103 103 GLU GLU A . n A 1 97 VAL 97 104 104 VAL VAL A . n A 1 98 ASN 98 105 105 ASN ASN A . n A 1 99 TRP 99 106 106 TRP TRP A . n A 1 100 ILE 100 107 107 ILE ILE A . n A 1 101 PRO 101 108 108 PRO PRO A . n A 1 102 CYS 102 109 109 CYS CYS A . n A 1 103 ASN 103 110 110 ASN ASN A . n A 1 104 ASN 104 111 111 ASN ASN A . n A 1 105 ARG 105 112 112 ARG ARG A . n A 1 106 ASN 106 113 ? ? ? A . n A 1 107 ARG 107 114 ? ? ? A . n A 1 108 PHE 108 115 ? ? ? A . n A 1 109 GLY 109 116 116 GLY GLY A . n A 1 110 GLN 110 117 117 GLN GLN A . n A 1 111 THR 111 118 118 THR THR A . n A 1 112 PRO 112 119 119 PRO PRO A . n A 1 113 VAL 113 120 120 VAL VAL A . n A 1 114 GLN 114 121 121 GLN GLN A . n A 1 115 GLU 115 122 122 GLU GLU A . n A 1 116 ARG 116 123 123 ARG ARG A . n A 1 117 LEU 117 124 124 LEU LEU A . n A 1 118 SER 118 125 125 SER SER A . n A 1 119 CYS 119 126 126 CYS CYS A . n A 1 120 LEU 120 127 127 LEU LEU A . n A 1 121 ALA 121 128 128 ALA ALA A . n A 1 122 LYS 122 129 129 LYS LYS A . n A 1 123 ASN 123 130 130 ASN ASN A . n A 1 124 ASN 124 131 131 ASN ASN A . n A 1 125 SER 125 132 132 SER SER A . n A 1 126 ILE 126 133 133 ILE ILE A . n A 1 127 TYR 127 134 134 TYR TYR A . n A 1 128 VAL 128 135 135 VAL VAL A . n A 1 129 VAL 129 136 136 VAL VAL A . n A 1 130 ALA 130 137 137 ALA ALA A . n A 1 131 ASN 131 138 138 ASN ASN A . n A 1 132 ILE 132 139 139 ILE ILE A . n A 1 133 GLY 133 140 140 GLY GLY A . n A 1 134 ASP 134 141 141 ASP ASP A . n A 1 135 LYS 135 142 142 LYS LYS A . n A 1 136 LYS 136 143 143 LYS LYS A . n A 1 137 PRO 137 144 144 PRO PRO A . n A 1 138 CYS 138 145 145 CYS CYS A . n A 1 139 ASP 139 146 146 ASP ASP A . n A 1 140 THR 140 147 147 THR THR A . n A 1 141 SER 141 148 148 SER SER A . n A 1 142 ASP 142 149 149 ASP ASP A . n A 1 143 PRO 143 150 150 PRO PRO A . n A 1 144 GLN 144 151 151 GLN GLN A . n A 1 145 CYS 145 152 152 CYS CYS A . n A 1 146 PRO 146 153 153 PRO PRO A . n A 1 147 PRO 147 154 154 PRO PRO A . n A 1 148 ASP 148 155 155 ASP ASP A . n A 1 149 GLY 149 156 156 GLY GLY A . n A 1 150 ARG 150 157 157 ARG ARG A . n A 1 151 TYR 151 158 158 TYR TYR A . n A 1 152 GLN 152 159 159 GLN GLN A . n A 1 153 TYR 153 160 160 TYR TYR A . n A 1 154 ASN 154 161 161 ASN ASN A . n A 1 155 THR 155 162 162 THR THR A . n A 1 156 ASP 156 163 163 ASP ASP A . n A 1 157 VAL 157 164 164 VAL VAL A . n A 1 158 VAL 158 165 165 VAL VAL A . n A 1 159 PHE 159 166 166 PHE PHE A . n A 1 160 ASP 160 167 167 ASP ASP A . n A 1 161 SER 161 168 168 SER SER A . n A 1 162 GLN 162 169 169 GLN GLN A . n A 1 163 GLY 163 170 170 GLY GLY A . n A 1 164 LYS 164 171 171 LYS LYS A . n A 1 165 LEU 165 172 172 LEU LEU A . n A 1 166 VAL 166 173 173 VAL VAL A . n A 1 167 ALA 167 174 174 ALA ALA A . n A 1 168 ARG 168 175 175 ARG ARG A . n A 1 169 TYR 169 176 176 TYR TYR A . n A 1 170 HIS 170 177 177 HIS HIS A . n A 1 171 LYS 171 178 178 LYS LYS A . n A 1 172 GLN 172 179 179 GLN GLN A . n A 1 173 ASN 173 180 180 ASN ASN A . n A 1 174 LEU 174 181 181 LEU LEU A . n A 1 175 PHE 175 182 182 PHE PHE A . n A 1 176 MET 176 183 183 MET MET A . n A 1 177 GLY 177 184 184 GLY GLY A . n A 1 178 GLU 178 185 185 GLU GLU A . n A 1 179 ASN 179 186 186 ASN ASN A . n A 1 180 GLN 180 187 187 GLN GLN A . n A 1 181 PHE 181 188 188 PHE PHE A . n A 1 182 ASN 182 189 189 ASN ASN A . n A 1 183 VAL 183 190 190 VAL VAL A . n A 1 184 PRO 184 191 191 PRO PRO A . n A 1 185 LYS 185 192 192 LYS LYS A . n A 1 186 GLU 186 193 193 GLU GLU A . n A 1 187 PRO 187 194 194 PRO PRO A . n A 1 188 GLU 188 195 195 GLU GLU A . n A 1 189 ILE 189 196 196 ILE ILE A . n A 1 190 VAL 190 197 197 VAL VAL A . n A 1 191 THR 191 198 198 THR THR A . n A 1 192 PHE 192 199 199 PHE PHE A . n A 1 193 ASN 193 200 200 ASN ASN A . n A 1 194 THR 194 201 201 THR THR A . n A 1 195 THR 195 202 202 THR THR A . n A 1 196 PHE 196 203 203 PHE PHE A . n A 1 197 GLY 197 204 204 GLY GLY A . n A 1 198 SER 198 205 205 SER SER A . n A 1 199 PHE 199 206 206 PHE PHE A . n A 1 200 GLY 200 207 207 GLY GLY A . n A 1 201 ILE 201 208 208 ILE ILE A . n A 1 202 PHE 202 209 209 PHE PHE A . n A 1 203 THR 203 210 210 THR THR A . n A 1 204 CYS 204 211 211 CYS CYS A . n A 1 205 PHE 205 212 212 PHE PHE A . n A 1 206 ASP 206 213 213 ASP ASP A . n A 1 207 ILE 207 214 214 ILE ILE A . n A 1 208 LEU 208 215 215 LEU LEU A . n A 1 209 PHE 209 216 216 PHE PHE A . n A 1 210 HIS 210 217 217 HIS HIS A . n A 1 211 ASP 211 218 218 ASP ASP A . n A 1 212 PRO 212 219 219 PRO PRO A . n A 1 213 ALA 213 220 220 ALA ALA A . n A 1 214 VAL 214 221 221 VAL VAL A . n A 1 215 THR 215 222 222 THR THR A . n A 1 216 LEU 216 223 223 LEU LEU A . n A 1 217 VAL 217 224 224 VAL VAL A . n A 1 218 LYS 218 225 225 LYS LYS A . n A 1 219 ASP 219 226 226 ASP ASP A . n A 1 220 PHE 220 227 227 PHE PHE A . n A 1 221 HIS 221 228 228 HIS HIS A . n A 1 222 VAL 222 229 229 VAL VAL A . n A 1 223 ASP 223 230 230 ASP ASP A . n A 1 224 THR 224 231 231 THR THR A . n A 1 225 ILE 225 232 232 ILE ILE A . n A 1 226 VAL 226 233 233 VAL VAL A . n A 1 227 PHE 227 234 234 PHE PHE A . n A 1 228 PRO 228 235 235 PRO PRO A . n A 1 229 THR 229 236 236 THR THR A . n A 1 230 ALA 230 237 237 ALA ALA A . n A 1 231 TRP 231 238 238 TRP TRP A . n A 1 232 MET 232 239 239 MET MET A . n A 1 233 ASN 233 240 240 ASN ASN A . n A 1 234 VAL 234 241 241 VAL VAL A . n A 1 235 LEU 235 242 242 LEU LEU A . n A 1 236 PRO 236 243 243 PRO PRO A . n A 1 237 HIS 237 244 244 HIS HIS A . n A 1 238 LEU 238 245 245 LEU LEU A . n A 1 239 SER 239 246 246 SER SER A . n A 1 240 ALA 240 247 247 ALA ALA A . n A 1 241 VAL 241 248 248 VAL VAL A . n A 1 242 GLU 242 249 249 GLU GLU A . n A 1 243 PHE 243 250 250 PHE PHE A . n A 1 244 HIS 244 251 251 HIS HIS A . n A 1 245 SER 245 252 252 SER SER A . n A 1 246 ALA 246 253 253 ALA ALA A . n A 1 247 TRP 247 254 254 TRP TRP A . n A 1 248 ALA 248 255 255 ALA ALA A . n A 1 249 MET 249 256 256 MET MET A . n A 1 250 GLY 250 257 257 GLY GLY A . n A 1 251 MET 251 258 258 MET MET A . n A 1 252 ARG 252 259 259 ARG ARG A . n A 1 253 VAL 253 260 260 VAL VAL A . n A 1 254 ASN 254 261 261 ASN ASN A . n A 1 255 PHE 255 262 262 PHE PHE A . n A 1 256 LEU 256 263 263 LEU LEU A . n A 1 257 ALA 257 264 264 ALA ALA A . n A 1 258 SER 258 265 265 SER SER A . n A 1 259 ASN 259 266 266 ASN ASN A . n A 1 260 ILE 260 267 267 ILE ILE A . n A 1 261 HIS 261 268 268 HIS HIS A . n A 1 262 TYR 262 269 269 TYR TYR A . n A 1 263 PRO 263 270 270 PRO PRO A . n A 1 264 SER 264 271 271 SER SER A . n A 1 265 LYS 265 272 272 LYS LYS A . n A 1 266 LYS 266 273 273 LYS LYS A . n A 1 267 MET 267 274 274 MET MET A . n A 1 268 THR 268 275 275 THR THR A . n A 1 269 GLY 269 276 276 GLY GLY A . n A 1 270 SER 270 277 277 SER SER A . n A 1 271 GLY 271 278 278 GLY GLY A . n A 1 272 ILE 272 279 279 ILE ILE A . n A 1 273 TYR 273 280 280 TYR TYR A . n A 1 274 ALA 274 281 281 ALA ALA A . n A 1 275 PRO 275 282 282 PRO PRO A . n A 1 276 ASN 276 283 283 ASN ASN A . n A 1 277 SER 277 284 284 SER SER A . n A 1 278 SER 278 285 285 SER SER A . n A 1 279 ARG 279 286 286 ARG ARG A . n A 1 280 ALA 280 287 287 ALA ALA A . n A 1 281 PHE 281 288 288 PHE PHE A . n A 1 282 HIS 282 289 289 HIS HIS A . n A 1 283 TYR 283 290 290 TYR TYR A . n A 1 284 ASP 284 291 291 ASP ASP A . n A 1 285 MET 285 292 292 MET MET A . n A 1 286 LYS 286 293 293 LYS LYS A . n A 1 287 THR 287 294 294 THR THR A . n A 1 288 GLU 288 295 295 GLU GLU A . n A 1 289 GLU 289 296 296 GLU GLU A . n A 1 290 GLY 290 297 297 GLY GLY A . n A 1 291 LYS 291 298 298 LYS LYS A . n A 1 292 LEU 292 299 299 LEU LEU A . n A 1 293 LEU 293 300 300 LEU LEU A . n A 1 294 LEU 294 301 301 LEU LEU A . n A 1 295 SER 295 302 302 SER SER A . n A 1 296 GLN 296 303 303 GLN GLN A . n A 1 297 LEU 297 304 304 LEU LEU A . n A 1 298 ASP 298 305 305 ASP ASP A . n A 1 299 SER 299 306 306 SER SER A . n A 1 300 HIS 300 307 307 HIS HIS A . n A 1 301 PRO 301 308 308 PRO PRO A . n A 1 302 SER 302 309 309 SER SER A . n A 1 303 HIS 303 310 310 HIS HIS A . n A 1 304 SER 304 311 311 SER SER A . n A 1 305 ALA 305 312 312 ALA ALA A . n A 1 306 VAL 306 313 313 VAL VAL A . n A 1 307 VAL 307 314 314 VAL VAL A . n A 1 308 ASN 308 315 315 ASN ASN A . n A 1 309 TRP 309 316 316 TRP TRP A . n A 1 310 THR 310 317 317 THR THR A . n A 1 311 SER 311 318 318 SER SER A . n A 1 312 TYR 312 319 319 TYR TYR A . n A 1 313 ALA 313 320 320 ALA ALA A . n A 1 314 SER 314 321 321 SER SER A . n A 1 315 SER 315 322 322 SER SER A . n A 1 316 ILE 316 323 323 ILE ILE A . n A 1 317 GLU 317 324 324 GLU GLU A . n A 1 318 ALA 318 325 325 ALA ALA A . n A 1 319 LEU 319 326 326 LEU LEU A . n A 1 320 SER 320 327 327 SER SER A . n A 1 321 SER 321 328 328 SER SER A . n A 1 322 GLY 322 329 329 GLY GLY A . n A 1 323 ASN 323 330 330 ASN ASN A . n A 1 324 LYS 324 331 331 LYS LYS A . n A 1 325 GLU 325 332 332 GLU GLU A . n A 1 326 PHE 326 333 333 PHE PHE A . n A 1 327 LYS 327 334 334 LYS LYS A . n A 1 328 GLY 328 335 335 GLY GLY A . n A 1 329 THR 329 336 336 THR THR A . n A 1 330 VAL 330 337 337 VAL VAL A . n A 1 331 PHE 331 338 338 PHE PHE A . n A 1 332 PHE 332 339 339 PHE PHE A . n A 1 333 ASP 333 340 340 ASP ASP A . n A 1 334 GLU 334 341 341 GLU GLU A . n A 1 335 PHE 335 342 342 PHE PHE A . n A 1 336 THR 336 343 343 THR THR A . n A 1 337 PHE 337 344 344 PHE PHE A . n A 1 338 VAL 338 345 345 VAL VAL A . n A 1 339 LYS 339 346 346 LYS LYS A . n A 1 340 LEU 340 347 347 LEU LEU A . n A 1 341 THR 341 348 348 THR THR A . n A 1 342 GLY 342 349 349 GLY GLY A . n A 1 343 VAL 343 350 350 VAL VAL A . n A 1 344 ALA 344 351 351 ALA ALA A . n A 1 345 GLY 345 352 352 GLY GLY A . n A 1 346 ASN 346 353 353 ASN ASN A . n A 1 347 TYR 347 354 354 TYR TYR A . n A 1 348 THR 348 355 355 THR THR A . n A 1 349 VAL 349 356 356 VAL VAL A . n A 1 350 CYS 350 357 357 CYS CYS A . n A 1 351 GLN 351 358 358 GLN GLN A . n A 1 352 LYS 352 359 359 LYS LYS A . n A 1 353 ASP 353 360 360 ASP ASP A . n A 1 354 LEU 354 361 361 LEU LEU A . n A 1 355 CYS 355 362 362 CYS CYS A . n A 1 356 CYS 356 363 363 CYS CYS A . n A 1 357 HIS 357 364 364 HIS HIS A . n A 1 358 LEU 358 365 365 LEU LEU A . n A 1 359 SER 359 366 366 SER SER A . n A 1 360 TYR 360 367 367 TYR TYR A . n A 1 361 LYS 361 368 368 LYS LYS A . n A 1 362 MET 362 369 369 MET MET A . n A 1 363 SER 363 370 370 SER SER A . n A 1 364 GLU 364 371 371 GLU GLU A . n A 1 365 ASN 365 372 372 ASN ASN A . n A 1 366 ILE 366 373 373 ILE ILE A . n A 1 367 PRO 367 374 374 PRO PRO A . n A 1 368 ASN 368 375 375 ASN ASN A . n A 1 369 GLU 369 376 376 GLU GLU A . n A 1 370 VAL 370 377 377 VAL VAL A . n A 1 371 TYR 371 378 378 TYR TYR A . n A 1 372 ALA 372 379 379 ALA ALA A . n A 1 373 LEU 373 380 380 LEU LEU A . n A 1 374 GLY 374 381 381 GLY GLY A . n A 1 375 ALA 375 382 382 ALA ALA A . n A 1 376 PHE 376 383 383 PHE PHE A . n A 1 377 ASP 377 384 384 ASP ASP A . n A 1 378 GLY 378 385 385 GLY GLY A . n A 1 379 LEU 379 386 386 LEU LEU A . n A 1 380 HIS 380 387 387 HIS HIS A . n A 1 381 THR 381 388 388 THR THR A . n A 1 382 VAL 382 389 389 VAL VAL A . n A 1 383 GLU 383 390 390 GLU GLU A . n A 1 384 GLY 384 391 391 GLY GLY A . n A 1 385 ARG 385 392 392 ARG ARG A . n A 1 386 TYR 386 393 393 TYR TYR A . n A 1 387 TYR 387 394 394 TYR TYR A . n A 1 388 LEU 388 395 395 LEU LEU A . n A 1 389 GLN 389 396 396 GLN GLN A . n A 1 390 ILE 390 397 397 ILE ILE A . n A 1 391 CYS 391 398 398 CYS CYS A . n A 1 392 THR 392 399 399 THR THR A . n A 1 393 LEU 393 400 400 LEU LEU A . n A 1 394 LEU 394 401 401 LEU LEU A . n A 1 395 LYS 395 402 402 LYS LYS A . n A 1 396 CYS 396 403 403 CYS CYS A . n A 1 397 LYS 397 404 404 LYS LYS A . n A 1 398 THR 398 405 405 THR THR A . n A 1 399 THR 399 406 406 THR THR A . n A 1 400 ASN 400 407 407 ASN ASN A . n A 1 401 LEU 401 408 408 LEU LEU A . n A 1 402 ASN 402 409 409 ASN ASN A . n A 1 403 THR 403 410 410 THR THR A . n A 1 404 CYS 404 411 411 CYS CYS A . n A 1 405 GLY 405 412 412 GLY GLY A . n A 1 406 ASP 406 413 413 ASP ASP A . n A 1 407 SER 407 414 414 SER SER A . n A 1 408 ALA 408 415 415 ALA ALA A . n A 1 409 GLU 409 416 416 GLU GLU A . n A 1 410 THR 410 417 417 THR THR A . n A 1 411 ALA 411 418 418 ALA ALA A . n A 1 412 SER 412 419 419 SER SER A . n A 1 413 THR 413 420 420 THR THR A . n A 1 414 ARG 414 421 421 ARG ARG A . n A 1 415 PHE 415 422 422 PHE PHE A . n A 1 416 GLU 416 423 423 GLU GLU A . n A 1 417 MET 417 424 424 MET MET A . n A 1 418 PHE 418 425 425 PHE PHE A . n A 1 419 SER 419 426 426 SER SER A . n A 1 420 LEU 420 427 427 LEU LEU A . n A 1 421 SER 421 428 428 SER SER A . n A 1 422 GLY 422 429 429 GLY GLY A . n A 1 423 THR 423 430 430 THR THR A . n A 1 424 PHE 424 431 431 PHE PHE A . n A 1 425 GLY 425 432 432 GLY GLY A . n A 1 426 THR 426 433 433 THR THR A . n A 1 427 GLN 427 434 434 GLN GLN A . n A 1 428 TYR 428 435 435 TYR TYR A . n A 1 429 VAL 429 436 436 VAL VAL A . n A 1 430 PHE 430 437 437 PHE PHE A . n A 1 431 PRO 431 438 438 PRO PRO A . n A 1 432 GLU 432 439 439 GLU GLU A . n A 1 433 VAL 433 440 440 VAL VAL A . n A 1 434 LEU 434 441 441 LEU LEU A . n A 1 435 LEU 435 442 442 LEU LEU A . n A 1 436 SER 436 443 443 SER SER A . n A 1 437 GLU 437 444 444 GLU GLU A . n A 1 438 ASN 438 445 445 ASN ASN A . n A 1 439 GLN 439 446 446 GLN GLN A . n A 1 440 LEU 440 447 447 LEU LEU A . n A 1 441 ALA 441 448 448 ALA ALA A . n A 1 442 PRO 442 449 449 PRO PRO A . n A 1 443 GLY 443 450 450 GLY GLY A . n A 1 444 GLU 444 451 451 GLU GLU A . n A 1 445 PHE 445 452 452 PHE PHE A . n A 1 446 GLN 446 453 453 GLN GLN A . n A 1 447 VAL 447 454 454 VAL VAL A . n A 1 448 SER 448 455 455 SER SER A . n A 1 449 THR 449 456 456 THR THR A . n A 1 450 ASP 450 457 457 ASP ASP A . n A 1 451 GLY 451 458 458 GLY GLY A . n A 1 452 ARG 452 459 459 ARG ARG A . n A 1 453 LEU 453 460 460 LEU LEU A . n A 1 454 PHE 454 461 461 PHE PHE A . n A 1 455 SER 455 462 462 SER SER A . n A 1 456 LEU 456 463 463 LEU LEU A . n A 1 457 LYS 457 464 464 LYS LYS A . n A 1 458 PRO 458 465 465 PRO PRO A . n A 1 459 THR 459 466 466 THR THR A . n A 1 460 SER 460 467 467 SER SER A . n A 1 461 GLY 461 468 468 GLY GLY A . n A 1 462 PRO 462 469 469 PRO PRO A . n A 1 463 VAL 463 470 470 VAL VAL A . n A 1 464 LEU 464 471 471 LEU LEU A . n A 1 465 THR 465 472 472 THR THR A . n A 1 466 VAL 466 473 473 VAL VAL A . n A 1 467 THR 467 474 474 THR THR A . n A 1 468 LEU 468 475 475 LEU LEU A . n A 1 469 PHE 469 476 476 PHE PHE A . n A 1 470 GLY 470 477 477 GLY GLY A . n A 1 471 ARG 471 478 478 ARG ARG A . n A 1 472 LEU 472 479 479 LEU LEU A . n A 1 473 TYR 473 480 480 TYR TYR A . n A 1 474 GLU 474 481 481 GLU GLU A . n A 1 475 LYS 475 482 482 LYS LYS A . n A 1 476 ASP 476 483 483 ASP ASP A . n A 1 477 TRP 477 484 ? ? ? A . n A 1 478 ALA 478 485 ? ? ? A . n A 1 479 SER 479 486 ? ? ? A . n A 1 480 ASN 480 487 ? ? ? A . n A 1 481 ALA 481 488 ? ? ? A . n A 1 482 SER 482 489 ? ? ? A . n A 1 483 SER 483 490 ? ? ? A . n A 1 484 GLY 484 491 ? ? ? A . n A 1 485 LEU 485 492 ? ? ? A . n A 1 486 THR 486 493 ? ? ? A . n A 1 487 ALA 487 494 ? ? ? A . n A 1 488 GLN 488 495 ? ? ? A . n A 1 489 ALA 489 496 ? ? ? A . n A 1 490 ARG 490 497 ? ? ? A . n A 1 491 ILE 491 498 ? ? ? A . n A 1 492 ILE 492 499 ? ? ? A . n A 1 493 MET 493 500 ? ? ? A . n A 1 494 LEU 494 501 ? ? ? A . n A 1 495 ILE 495 502 ? ? ? A . n A 1 496 VAL 496 503 ? ? ? A . n A 1 497 ILE 497 504 ? ? ? A . n A 1 498 ALA 498 505 ? ? ? A . n A 1 499 PRO 499 506 ? ? ? A . n A 1 500 ILE 500 507 ? ? ? A . n A 1 501 VAL 501 508 ? ? ? A . n A 1 502 CYS 502 509 ? ? ? A . n A 1 503 SER 503 510 ? ? ? A . n A 1 504 LEU 504 511 ? ? ? A . n A 1 505 SER 505 512 ? ? ? A . n A 1 506 TRP 506 513 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 NAG 1 522 522 NAG NAG A . D 3 NAG 1 525 525 NAG NAG A . E 3 NAG 1 532 532 NAG NAG A . F 3 NAG 1 533 533 NAG NAG A . G 4 HOH 1 2001 2001 HOH HOH A . G 4 HOH 2 2002 2002 HOH HOH A . G 4 HOH 3 2003 2003 HOH HOH A . G 4 HOH 4 2004 2004 HOH HOH A . G 4 HOH 5 2005 2005 HOH HOH A . G 4 HOH 6 2006 2006 HOH HOH A . G 4 HOH 7 2007 2007 HOH HOH A . G 4 HOH 8 2008 2008 HOH HOH A . G 4 HOH 9 2009 2009 HOH HOH A . G 4 HOH 10 2010 2010 HOH HOH A . G 4 HOH 11 2011 2011 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A ASN 31 A ASN 38 ? ASN 'GLYCOSYLATION SITE' 2 A ASN 123 A ASN 130 ? ASN 'GLYCOSYLATION SITE' 3 A ASN 193 A ASN 200 ? ASN 'GLYCOSYLATION SITE' 4 A ASN 308 A ASN 315 ? ASN 'GLYCOSYLATION SITE' 5 A ASN 346 A ASN 353 ? ASN 'GLYCOSYLATION SITE' # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2014-12-10 2 'Structure model' 1 1 2015-02-25 3 'Structure model' 1 2 2019-05-08 4 'Structure model' 2 0 2020-07-29 5 'Structure model' 2 1 2023-12-20 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 4 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Derived calculations' 4 3 'Structure model' 'Experimental preparation' 5 3 'Structure model' Other 6 4 'Structure model' Advisory 7 4 'Structure model' 'Atomic model' 8 4 'Structure model' 'Data collection' 9 4 'Structure model' 'Derived calculations' 10 4 'Structure model' Other 11 4 'Structure model' 'Structure summary' 12 5 'Structure model' 'Data collection' 13 5 'Structure model' 'Database references' 14 5 'Structure model' 'Refinement description' 15 5 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' exptl_crystal_grow 2 3 'Structure model' pdbx_database_proc 3 3 'Structure model' pdbx_database_status 4 3 'Structure model' struct_conn 5 4 'Structure model' atom_site 6 4 'Structure model' chem_comp 7 4 'Structure model' database_PDB_caveat 8 4 'Structure model' entity 9 4 'Structure model' pdbx_branch_scheme 10 4 'Structure model' pdbx_chem_comp_identifier 11 4 'Structure model' pdbx_database_status 12 4 'Structure model' pdbx_entity_branch 13 4 'Structure model' pdbx_entity_branch_descriptor 14 4 'Structure model' pdbx_entity_branch_link 15 4 'Structure model' pdbx_entity_branch_list 16 4 'Structure model' pdbx_entity_nonpoly 17 4 'Structure model' pdbx_nonpoly_scheme 18 4 'Structure model' pdbx_struct_assembly_gen 19 4 'Structure model' pdbx_validate_chiral 20 4 'Structure model' struct_asym 21 4 'Structure model' struct_conn 22 4 'Structure model' struct_site 23 4 'Structure model' struct_site_gen 24 5 'Structure model' chem_comp 25 5 'Structure model' chem_comp_atom 26 5 'Structure model' chem_comp_bond 27 5 'Structure model' database_2 28 5 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_exptl_crystal_grow.method' 2 3 'Structure model' '_pdbx_database_status.recvd_author_approval' 3 3 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 4 4 'Structure model' '_atom_site.auth_asym_id' 5 4 'Structure model' '_atom_site.auth_seq_id' 6 4 'Structure model' '_atom_site.label_asym_id' 7 4 'Structure model' '_atom_site.label_entity_id' 8 4 'Structure model' '_chem_comp.name' 9 4 'Structure model' '_chem_comp.type' 10 4 'Structure model' '_pdbx_database_status.status_code_sf' 11 4 'Structure model' '_pdbx_entity_nonpoly.entity_id' 12 4 'Structure model' '_pdbx_entity_nonpoly.name' 13 4 'Structure model' '_pdbx_struct_assembly_gen.asym_id_list' 14 4 'Structure model' '_pdbx_validate_chiral.auth_asym_id' 15 4 'Structure model' '_pdbx_validate_chiral.auth_seq_id' 16 4 'Structure model' '_struct_conn.pdbx_role' 17 4 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 18 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 19 4 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 20 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 21 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 22 5 'Structure model' '_chem_comp.pdbx_synonyms' 23 5 'Structure model' '_database_2.pdbx_DOI' 24 5 'Structure model' '_database_2.pdbx_database_accession' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.8.0069 ? 1 XDS 'data reduction' . ? 2 SCALA 'data scaling' . ? 3 PHASER phasing . ? 4 # _pdbx_entry_details.entry_id 4CYY _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ;FLAG TAG AT N-TERMINUS AND THE PRO-PEPTIDE AT THE C- TERMINUS HAS BEEN REMOVED TO GIVE THE MATURE FORM OF THE PROTEIN. IN ADDITION THE DEPOSITED STRUCTURE HAS THE NATURALLY OCCURRING THR26ILE SNP IN THE SEQUENCE. ; _pdbx_entry_details.has_ligand_of_interest ? # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 OG _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 SER _pdbx_validate_close_contact.auth_seq_id_1 455 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 OD1 _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 ASP _pdbx_validate_close_contact.auth_seq_id_2 457 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.19 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PRO A 43 ? ? -35.42 134.59 2 1 ASN A 105 ? ? 66.69 75.92 3 1 ASN A 111 ? ? -114.75 70.04 4 1 THR A 118 ? ? -148.53 57.37 5 1 GLU A 185 ? ? -83.38 38.09 6 1 CYS A 211 ? ? 38.70 -110.43 7 1 TYR A 269 ? ? -157.07 79.08 8 1 SER A 271 ? ? -36.49 -33.95 9 1 THR A 275 ? ? 179.96 142.78 10 1 SER A 302 ? ? -170.28 141.30 11 1 LYS A 359 ? ? 49.57 -114.21 # loop_ _pdbx_validate_chiral.id _pdbx_validate_chiral.PDB_model_num _pdbx_validate_chiral.auth_atom_id _pdbx_validate_chiral.label_alt_id _pdbx_validate_chiral.auth_asym_id _pdbx_validate_chiral.auth_comp_id _pdbx_validate_chiral.auth_seq_id _pdbx_validate_chiral.PDB_ins_code _pdbx_validate_chiral.details _pdbx_validate_chiral.omega 1 1 C1 ? B NAG 1 ? PLANAR . 2 1 C1 ? A NAG 532 ? 'WRONG HAND' . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ASP 20 ? CG ? A ASP 13 CG 2 1 Y 1 A ASP 20 ? OD1 ? A ASP 13 OD1 3 1 Y 1 A ASP 20 ? OD2 ? A ASP 13 OD2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A ALA 8 ? A ALA 1 2 1 Y 1 A SER 9 ? A SER 2 3 1 Y 1 A ILE 10 ? A ILE 3 4 1 Y 1 A SER 11 ? A SER 4 5 1 Y 1 A ALA 12 ? A ALA 5 6 1 Y 1 A ARG 13 ? A ARG 6 7 1 Y 1 A ASP 14 ? A ASP 7 8 1 Y 1 A TYR 15 ? A TYR 8 9 1 Y 1 A LYS 16 ? A LYS 9 10 1 Y 1 A ASP 17 ? A ASP 10 11 1 Y 1 A ASP 18 ? A ASP 11 12 1 Y 1 A ASP 19 ? A ASP 12 13 1 Y 1 A ASN 113 ? A ASN 106 14 1 Y 1 A ARG 114 ? A ARG 107 15 1 Y 1 A PHE 115 ? A PHE 108 16 1 Y 1 A TRP 484 ? A TRP 477 17 1 Y 1 A ALA 485 ? A ALA 478 18 1 Y 1 A SER 486 ? A SER 479 19 1 Y 1 A ASN 487 ? A ASN 480 20 1 Y 1 A ALA 488 ? A ALA 481 21 1 Y 1 A SER 489 ? A SER 482 22 1 Y 1 A SER 490 ? A SER 483 23 1 Y 1 A GLY 491 ? A GLY 484 24 1 Y 1 A LEU 492 ? A LEU 485 25 1 Y 1 A THR 493 ? A THR 486 26 1 Y 1 A ALA 494 ? A ALA 487 27 1 Y 1 A GLN 495 ? A GLN 488 28 1 Y 1 A ALA 496 ? A ALA 489 29 1 Y 1 A ARG 497 ? A ARG 490 30 1 Y 1 A ILE 498 ? A ILE 491 31 1 Y 1 A ILE 499 ? A ILE 492 32 1 Y 1 A MET 500 ? A MET 493 33 1 Y 1 A LEU 501 ? A LEU 494 34 1 Y 1 A ILE 502 ? A ILE 495 35 1 Y 1 A VAL 503 ? A VAL 496 36 1 Y 1 A ILE 504 ? A ILE 497 37 1 Y 1 A ALA 505 ? A ALA 498 38 1 Y 1 A PRO 506 ? A PRO 499 39 1 Y 1 A ILE 507 ? A ILE 500 40 1 Y 1 A VAL 508 ? A VAL 501 41 1 Y 1 A CYS 509 ? A CYS 502 42 1 Y 1 A SER 510 ? A SER 503 43 1 Y 1 A LEU 511 ? A LEU 504 44 1 Y 1 A SER 512 ? A SER 505 45 1 Y 1 A TRP 513 ? A TRP 506 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 HOH O O N N 158 HOH H1 H N N 159 HOH H2 H N N 160 ILE N N N N 161 ILE CA C N S 162 ILE C C N N 163 ILE O O N N 164 ILE CB C N S 165 ILE CG1 C N N 166 ILE CG2 C N N 167 ILE CD1 C N N 168 ILE OXT O N N 169 ILE H H N N 170 ILE H2 H N N 171 ILE HA H N N 172 ILE HB H N N 173 ILE HG12 H N N 174 ILE HG13 H N N 175 ILE HG21 H N N 176 ILE HG22 H N N 177 ILE HG23 H N N 178 ILE HD11 H N N 179 ILE HD12 H N N 180 ILE HD13 H N N 181 ILE HXT H N N 182 LEU N N N N 183 LEU CA C N S 184 LEU C C N N 185 LEU O O N N 186 LEU CB C N N 187 LEU CG C N N 188 LEU CD1 C N N 189 LEU CD2 C N N 190 LEU OXT O N N 191 LEU H H N N 192 LEU H2 H N N 193 LEU HA H N N 194 LEU HB2 H N N 195 LEU HB3 H N N 196 LEU HG H N N 197 LEU HD11 H N N 198 LEU HD12 H N N 199 LEU HD13 H N N 200 LEU HD21 H N N 201 LEU HD22 H N N 202 LEU HD23 H N N 203 LEU HXT H N N 204 LYS N N N N 205 LYS CA C N S 206 LYS C C N N 207 LYS O O N N 208 LYS CB C N N 209 LYS CG C N N 210 LYS CD C N N 211 LYS CE C N N 212 LYS NZ N N N 213 LYS OXT O N N 214 LYS H H N N 215 LYS H2 H N N 216 LYS HA H N N 217 LYS HB2 H N N 218 LYS HB3 H N N 219 LYS HG2 H N N 220 LYS HG3 H N N 221 LYS HD2 H N N 222 LYS HD3 H N N 223 LYS HE2 H N N 224 LYS HE3 H N N 225 LYS HZ1 H N N 226 LYS HZ2 H N N 227 LYS HZ3 H N N 228 LYS HXT H N N 229 MET N N N N 230 MET CA C N S 231 MET C C N N 232 MET O O N N 233 MET CB C N N 234 MET CG C N N 235 MET SD S N N 236 MET CE C N N 237 MET OXT O N N 238 MET H H N N 239 MET H2 H N N 240 MET HA H N N 241 MET HB2 H N N 242 MET HB3 H N N 243 MET HG2 H N N 244 MET HG3 H N N 245 MET HE1 H N N 246 MET HE2 H N N 247 MET HE3 H N N 248 MET HXT H N N 249 NAG C1 C N R 250 NAG C2 C N R 251 NAG C3 C N R 252 NAG C4 C N S 253 NAG C5 C N R 254 NAG C6 C N N 255 NAG C7 C N N 256 NAG C8 C N N 257 NAG N2 N N N 258 NAG O1 O N N 259 NAG O3 O N N 260 NAG O4 O N N 261 NAG O5 O N N 262 NAG O6 O N N 263 NAG O7 O N N 264 NAG H1 H N N 265 NAG H2 H N N 266 NAG H3 H N N 267 NAG H4 H N N 268 NAG H5 H N N 269 NAG H61 H N N 270 NAG H62 H N N 271 NAG H81 H N N 272 NAG H82 H N N 273 NAG H83 H N N 274 NAG HN2 H N N 275 NAG HO1 H N N 276 NAG HO3 H N N 277 NAG HO4 H N N 278 NAG HO6 H N N 279 PHE N N N N 280 PHE CA C N S 281 PHE C C N N 282 PHE O O N N 283 PHE CB C N N 284 PHE CG C Y N 285 PHE CD1 C Y N 286 PHE CD2 C Y N 287 PHE CE1 C Y N 288 PHE CE2 C Y N 289 PHE CZ C Y N 290 PHE OXT O N N 291 PHE H H N N 292 PHE H2 H N N 293 PHE HA H N N 294 PHE HB2 H N N 295 PHE HB3 H N N 296 PHE HD1 H N N 297 PHE HD2 H N N 298 PHE HE1 H N N 299 PHE HE2 H N N 300 PHE HZ H N N 301 PHE HXT H N N 302 PRO N N N N 303 PRO CA C N S 304 PRO C C N N 305 PRO O O N N 306 PRO CB C N N 307 PRO CG C N N 308 PRO CD C N N 309 PRO OXT O N N 310 PRO H H N N 311 PRO HA H N N 312 PRO HB2 H N N 313 PRO HB3 H N N 314 PRO HG2 H N N 315 PRO HG3 H N N 316 PRO HD2 H N N 317 PRO HD3 H N N 318 PRO HXT H N N 319 SER N N N N 320 SER CA C N S 321 SER C C N N 322 SER O O N N 323 SER CB C N N 324 SER OG O N N 325 SER OXT O N N 326 SER H H N N 327 SER H2 H N N 328 SER HA H N N 329 SER HB2 H N N 330 SER HB3 H N N 331 SER HG H N N 332 SER HXT H N N 333 THR N N N N 334 THR CA C N S 335 THR C C N N 336 THR O O N N 337 THR CB C N R 338 THR OG1 O N N 339 THR CG2 C N N 340 THR OXT O N N 341 THR H H N N 342 THR H2 H N N 343 THR HA H N N 344 THR HB H N N 345 THR HG1 H N N 346 THR HG21 H N N 347 THR HG22 H N N 348 THR HG23 H N N 349 THR HXT H N N 350 TRP N N N N 351 TRP CA C N S 352 TRP C C N N 353 TRP O O N N 354 TRP CB C N N 355 TRP CG C Y N 356 TRP CD1 C Y N 357 TRP CD2 C Y N 358 TRP NE1 N Y N 359 TRP CE2 C Y N 360 TRP CE3 C Y N 361 TRP CZ2 C Y N 362 TRP CZ3 C Y N 363 TRP CH2 C Y N 364 TRP OXT O N N 365 TRP H H N N 366 TRP H2 H N N 367 TRP HA H N N 368 TRP HB2 H N N 369 TRP HB3 H N N 370 TRP HD1 H N N 371 TRP HE1 H N N 372 TRP HE3 H N N 373 TRP HZ2 H N N 374 TRP HZ3 H N N 375 TRP HH2 H N N 376 TRP HXT H N N 377 TYR N N N N 378 TYR CA C N S 379 TYR C C N N 380 TYR O O N N 381 TYR CB C N N 382 TYR CG C Y N 383 TYR CD1 C Y N 384 TYR CD2 C Y N 385 TYR CE1 C Y N 386 TYR CE2 C Y N 387 TYR CZ C Y N 388 TYR OH O N N 389 TYR OXT O N N 390 TYR H H N N 391 TYR H2 H N N 392 TYR HA H N N 393 TYR HB2 H N N 394 TYR HB3 H N N 395 TYR HD1 H N N 396 TYR HD2 H N N 397 TYR HE1 H N N 398 TYR HE2 H N N 399 TYR HH H N N 400 TYR HXT H N N 401 VAL N N N N 402 VAL CA C N S 403 VAL C C N N 404 VAL O O N N 405 VAL CB C N N 406 VAL CG1 C N N 407 VAL CG2 C N N 408 VAL OXT O N N 409 VAL H H N N 410 VAL H2 H N N 411 VAL HA H N N 412 VAL HB H N N 413 VAL HG11 H N N 414 VAL HG12 H N N 415 VAL HG13 H N N 416 VAL HG21 H N N 417 VAL HG22 H N N 418 VAL HG23 H N N 419 VAL HXT H N N 420 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 ILE N CA sing N N 152 ILE N H sing N N 153 ILE N H2 sing N N 154 ILE CA C sing N N 155 ILE CA CB sing N N 156 ILE CA HA sing N N 157 ILE C O doub N N 158 ILE C OXT sing N N 159 ILE CB CG1 sing N N 160 ILE CB CG2 sing N N 161 ILE CB HB sing N N 162 ILE CG1 CD1 sing N N 163 ILE CG1 HG12 sing N N 164 ILE CG1 HG13 sing N N 165 ILE CG2 HG21 sing N N 166 ILE CG2 HG22 sing N N 167 ILE CG2 HG23 sing N N 168 ILE CD1 HD11 sing N N 169 ILE CD1 HD12 sing N N 170 ILE CD1 HD13 sing N N 171 ILE OXT HXT sing N N 172 LEU N CA sing N N 173 LEU N H sing N N 174 LEU N H2 sing N N 175 LEU CA C sing N N 176 LEU CA CB sing N N 177 LEU CA HA sing N N 178 LEU C O doub N N 179 LEU C OXT sing N N 180 LEU CB CG sing N N 181 LEU CB HB2 sing N N 182 LEU CB HB3 sing N N 183 LEU CG CD1 sing N N 184 LEU CG CD2 sing N N 185 LEU CG HG sing N N 186 LEU CD1 HD11 sing N N 187 LEU CD1 HD12 sing N N 188 LEU CD1 HD13 sing N N 189 LEU CD2 HD21 sing N N 190 LEU CD2 HD22 sing N N 191 LEU CD2 HD23 sing N N 192 LEU OXT HXT sing N N 193 LYS N CA sing N N 194 LYS N H sing N N 195 LYS N H2 sing N N 196 LYS CA C sing N N 197 LYS CA CB sing N N 198 LYS CA HA sing N N 199 LYS C O doub N N 200 LYS C OXT sing N N 201 LYS CB CG sing N N 202 LYS CB HB2 sing N N 203 LYS CB HB3 sing N N 204 LYS CG CD sing N N 205 LYS CG HG2 sing N N 206 LYS CG HG3 sing N N 207 LYS CD CE sing N N 208 LYS CD HD2 sing N N 209 LYS CD HD3 sing N N 210 LYS CE NZ sing N N 211 LYS CE HE2 sing N N 212 LYS CE HE3 sing N N 213 LYS NZ HZ1 sing N N 214 LYS NZ HZ2 sing N N 215 LYS NZ HZ3 sing N N 216 LYS OXT HXT sing N N 217 MET N CA sing N N 218 MET N H sing N N 219 MET N H2 sing N N 220 MET CA C sing N N 221 MET CA CB sing N N 222 MET CA HA sing N N 223 MET C O doub N N 224 MET C OXT sing N N 225 MET CB CG sing N N 226 MET CB HB2 sing N N 227 MET CB HB3 sing N N 228 MET CG SD sing N N 229 MET CG HG2 sing N N 230 MET CG HG3 sing N N 231 MET SD CE sing N N 232 MET CE HE1 sing N N 233 MET CE HE2 sing N N 234 MET CE HE3 sing N N 235 MET OXT HXT sing N N 236 NAG C1 C2 sing N N 237 NAG C1 O1 sing N N 238 NAG C1 O5 sing N N 239 NAG C1 H1 sing N N 240 NAG C2 C3 sing N N 241 NAG C2 N2 sing N N 242 NAG C2 H2 sing N N 243 NAG C3 C4 sing N N 244 NAG C3 O3 sing N N 245 NAG C3 H3 sing N N 246 NAG C4 C5 sing N N 247 NAG C4 O4 sing N N 248 NAG C4 H4 sing N N 249 NAG C5 C6 sing N N 250 NAG C5 O5 sing N N 251 NAG C5 H5 sing N N 252 NAG C6 O6 sing N N 253 NAG C6 H61 sing N N 254 NAG C6 H62 sing N N 255 NAG C7 C8 sing N N 256 NAG C7 N2 sing N N 257 NAG C7 O7 doub N N 258 NAG C8 H81 sing N N 259 NAG C8 H82 sing N N 260 NAG C8 H83 sing N N 261 NAG N2 HN2 sing N N 262 NAG O1 HO1 sing N N 263 NAG O3 HO3 sing N N 264 NAG O4 HO4 sing N N 265 NAG O6 HO6 sing N N 266 PHE N CA sing N N 267 PHE N H sing N N 268 PHE N H2 sing N N 269 PHE CA C sing N N 270 PHE CA CB sing N N 271 PHE CA HA sing N N 272 PHE C O doub N N 273 PHE C OXT sing N N 274 PHE CB CG sing N N 275 PHE CB HB2 sing N N 276 PHE CB HB3 sing N N 277 PHE CG CD1 doub Y N 278 PHE CG CD2 sing Y N 279 PHE CD1 CE1 sing Y N 280 PHE CD1 HD1 sing N N 281 PHE CD2 CE2 doub Y N 282 PHE CD2 HD2 sing N N 283 PHE CE1 CZ doub Y N 284 PHE CE1 HE1 sing N N 285 PHE CE2 CZ sing Y N 286 PHE CE2 HE2 sing N N 287 PHE CZ HZ sing N N 288 PHE OXT HXT sing N N 289 PRO N CA sing N N 290 PRO N CD sing N N 291 PRO N H sing N N 292 PRO CA C sing N N 293 PRO CA CB sing N N 294 PRO CA HA sing N N 295 PRO C O doub N N 296 PRO C OXT sing N N 297 PRO CB CG sing N N 298 PRO CB HB2 sing N N 299 PRO CB HB3 sing N N 300 PRO CG CD sing N N 301 PRO CG HG2 sing N N 302 PRO CG HG3 sing N N 303 PRO CD HD2 sing N N 304 PRO CD HD3 sing N N 305 PRO OXT HXT sing N N 306 SER N CA sing N N 307 SER N H sing N N 308 SER N H2 sing N N 309 SER CA C sing N N 310 SER CA CB sing N N 311 SER CA HA sing N N 312 SER C O doub N N 313 SER C OXT sing N N 314 SER CB OG sing N N 315 SER CB HB2 sing N N 316 SER CB HB3 sing N N 317 SER OG HG sing N N 318 SER OXT HXT sing N N 319 THR N CA sing N N 320 THR N H sing N N 321 THR N H2 sing N N 322 THR CA C sing N N 323 THR CA CB sing N N 324 THR CA HA sing N N 325 THR C O doub N N 326 THR C OXT sing N N 327 THR CB OG1 sing N N 328 THR CB CG2 sing N N 329 THR CB HB sing N N 330 THR OG1 HG1 sing N N 331 THR CG2 HG21 sing N N 332 THR CG2 HG22 sing N N 333 THR CG2 HG23 sing N N 334 THR OXT HXT sing N N 335 TRP N CA sing N N 336 TRP N H sing N N 337 TRP N H2 sing N N 338 TRP CA C sing N N 339 TRP CA CB sing N N 340 TRP CA HA sing N N 341 TRP C O doub N N 342 TRP C OXT sing N N 343 TRP CB CG sing N N 344 TRP CB HB2 sing N N 345 TRP CB HB3 sing N N 346 TRP CG CD1 doub Y N 347 TRP CG CD2 sing Y N 348 TRP CD1 NE1 sing Y N 349 TRP CD1 HD1 sing N N 350 TRP CD2 CE2 doub Y N 351 TRP CD2 CE3 sing Y N 352 TRP NE1 CE2 sing Y N 353 TRP NE1 HE1 sing N N 354 TRP CE2 CZ2 sing Y N 355 TRP CE3 CZ3 doub Y N 356 TRP CE3 HE3 sing N N 357 TRP CZ2 CH2 doub Y N 358 TRP CZ2 HZ2 sing N N 359 TRP CZ3 CH2 sing Y N 360 TRP CZ3 HZ3 sing N N 361 TRP CH2 HH2 sing N N 362 TRP OXT HXT sing N N 363 TYR N CA sing N N 364 TYR N H sing N N 365 TYR N H2 sing N N 366 TYR CA C sing N N 367 TYR CA CB sing N N 368 TYR CA HA sing N N 369 TYR C O doub N N 370 TYR C OXT sing N N 371 TYR CB CG sing N N 372 TYR CB HB2 sing N N 373 TYR CB HB3 sing N N 374 TYR CG CD1 doub Y N 375 TYR CG CD2 sing Y N 376 TYR CD1 CE1 sing Y N 377 TYR CD1 HD1 sing N N 378 TYR CD2 CE2 doub Y N 379 TYR CD2 HD2 sing N N 380 TYR CE1 CZ doub Y N 381 TYR CE1 HE1 sing N N 382 TYR CE2 CZ sing Y N 383 TYR CE2 HE2 sing N N 384 TYR CZ OH sing N N 385 TYR OH HH sing N N 386 TYR OXT HXT sing N N 387 VAL N CA sing N N 388 VAL N H sing N N 389 VAL N H2 sing N N 390 VAL CA C sing N N 391 VAL CA CB sing N N 392 VAL CA HA sing N N 393 VAL C O doub N N 394 VAL C OXT sing N N 395 VAL CB CG1 sing N N 396 VAL CB CG2 sing N N 397 VAL CB HB sing N N 398 VAL CG1 HG11 sing N N 399 VAL CG1 HG12 sing N N 400 VAL CG1 HG13 sing N N 401 VAL CG2 HG21 sing N N 402 VAL CG2 HG22 sing N N 403 VAL CG2 HG23 sing N N 404 VAL OXT HXT sing N N 405 # loop_ _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_mon_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.hetero B 2 NAG 1 B NAG 1 A NAG 520 n B 2 NAG 2 B NAG 2 A NAG 521 n # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier NAG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAcb NAG 'COMMON NAME' GMML 1.0 N-acetyl-b-D-glucopyranosamine NAG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GlcpNAc NAG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc # _pdbx_entity_branch.entity_id 2 _pdbx_entity_branch.type oligosaccharide # loop_ _pdbx_entity_branch_descriptor.ordinal _pdbx_entity_branch_descriptor.entity_id _pdbx_entity_branch_descriptor.descriptor _pdbx_entity_branch_descriptor.type _pdbx_entity_branch_descriptor.program _pdbx_entity_branch_descriptor.program_version 1 2 DGlcpNAcb1-4DGlcpNAcb1- 'Glycam Condensed Sequence' GMML 1.0 2 2 'WURCS=2.0/1,2,1/[a2122h-1b_1-5_2*NCC/3=O]/1-1/a4-b1' WURCS PDB2Glycan 1.1.0 3 2 '[]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-GlcpNAc]{}}}' LINUCS PDB-CARE ? # _pdbx_entity_branch_link.link_id 1 _pdbx_entity_branch_link.entity_id 2 _pdbx_entity_branch_link.entity_branch_list_num_1 2 _pdbx_entity_branch_link.comp_id_1 NAG _pdbx_entity_branch_link.atom_id_1 C1 _pdbx_entity_branch_link.leaving_atom_id_1 O1 _pdbx_entity_branch_link.entity_branch_list_num_2 1 _pdbx_entity_branch_link.comp_id_2 NAG _pdbx_entity_branch_link.atom_id_2 O4 _pdbx_entity_branch_link.leaving_atom_id_2 HO4 _pdbx_entity_branch_link.value_order sing _pdbx_entity_branch_link.details ? # loop_ _pdbx_entity_branch_list.entity_id _pdbx_entity_branch_list.comp_id _pdbx_entity_branch_list.num _pdbx_entity_branch_list.hetero 2 NAG 1 n 2 NAG 2 n # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 2-acetamido-2-deoxy-beta-D-glucopyranose NAG 4 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 4CYF _pdbx_initial_refinement_model.details 'PDB ENTRY 4CYF' #