HEADER APOPTOSIS 12-MAY-14 4D2M TITLE VACCINIA VIRUS F1L BOUND TO BIM BH3 COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTEIN F1; COMPND 3 CHAIN: A, C; COMPND 4 FRAGMENT: RESIDUES 18-186; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: BCL-2-LIKE PROTEIN 11; COMPND 9 CHAIN: B, D; COMPND 10 FRAGMENT: RESIDUES 141-166; COMPND 11 SYNONYM: BCL2-L-11, BCL2-INTERACTING MEDIATOR OF CELL DEATH; COMPND 12 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: VACCINIA VIRUS ANKARA; SOURCE 3 ORGANISM_TAXID: 126794; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_VARIANT: PLYZS; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET DUET; SOURCE 10 MOL_ID: 2; SOURCE 11 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 12 ORGANISM_COMMON: HUMAN; SOURCE 13 ORGANISM_TAXID: 9606; SOURCE 14 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 15 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 16 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 17 EXPRESSION_SYSTEM_VARIANT: PLYZS; SOURCE 18 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 19 EXPRESSION_SYSTEM_PLASMID: PET DUET KEYWDS APOPTOSIS EXPDTA X-RAY DIFFRACTION AUTHOR M.KVANSAKUL,P.M.COLMAN REVDAT 4 20-DEC-23 4D2M 1 REMARK LINK REVDAT 3 13-AUG-14 4D2M 1 JRNL REVDAT 2 18-JUN-14 4D2M 1 ATOM HETATM REVDAT 1 04-JUN-14 4D2M 0 JRNL AUTH S.CAMPBELL,J.THIBAULT,N.MEHTA,P.M.COLMAN,M.BARRY,M.KVANSAKUL JRNL TITL STRUCTURAL INSIGHT INTO BH3-DOMAIN BINDING OF VACCINIA VIRUS JRNL TITL 2 ANTI-APOPTOTIC F1L. JRNL REF J.VIROL. V. 88 8667 2014 JRNL REFN ISSN 0022-538X JRNL PMID 24850748 JRNL DOI 10.1128/JVI.01092-14 REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 37.79 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.900 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 23008 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.217 REMARK 3 R VALUE (WORKING SET) : 0.215 REMARK 3 FREE R VALUE : 0.255 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1181 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 37.7936 - 4.1984 0.99 2959 144 0.2140 0.2410 REMARK 3 2 4.1984 - 3.3330 1.00 2772 144 0.1990 0.2467 REMARK 3 3 3.3330 - 2.9119 1.00 2754 136 0.2204 0.2660 REMARK 3 4 2.9119 - 2.6457 1.00 2702 156 0.2080 0.2264 REMARK 3 5 2.6457 - 2.4561 1.00 2654 162 0.2250 0.2686 REMARK 3 6 2.4561 - 2.3113 1.00 2727 137 0.2213 0.2730 REMARK 3 7 2.3113 - 2.1956 1.00 2641 156 0.2390 0.2864 REMARK 3 8 2.1956 - 2.1000 1.00 2618 146 0.2465 0.3229 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.240 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 26.060 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 35.05 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 2674 REMARK 3 ANGLE : 0.626 3607 REMARK 3 CHIRALITY : 0.026 404 REMARK 3 PLANARITY : 0.002 453 REMARK 3 DIHEDRAL : 12.875 1007 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 51 THROUGH 81 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.2716 15.6293 -16.6723 REMARK 3 T TENSOR REMARK 3 T11: 0.4404 T22: 0.2689 REMARK 3 T33: 0.2455 T12: -0.0665 REMARK 3 T13: -0.0946 T23: 0.0003 REMARK 3 L TENSOR REMARK 3 L11: 5.6790 L22: 1.8798 REMARK 3 L33: 2.0212 L12: -0.8081 REMARK 3 L13: -0.3945 L23: 0.4938 REMARK 3 S TENSOR REMARK 3 S11: -0.0104 S12: -0.1500 S13: 0.2064 REMARK 3 S21: -0.4171 S22: -0.0881 S23: 0.2642 REMARK 3 S31: 0.0251 S32: -0.2453 S33: 0.1708 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 82 THROUGH 186 ) REMARK 3 ORIGIN FOR THE GROUP (A): 21.5845 -0.1327 -13.2535 REMARK 3 T TENSOR REMARK 3 T11: 0.4086 T22: 0.2404 REMARK 3 T33: 0.2619 T12: -0.0325 REMARK 3 T13: 0.0747 T23: -0.0352 REMARK 3 L TENSOR REMARK 3 L11: 2.3834 L22: 2.8322 REMARK 3 L33: 2.9129 L12: -0.3306 REMARK 3 L13: 0.3346 L23: -0.1196 REMARK 3 S TENSOR REMARK 3 S11: 0.0539 S12: 0.0916 S13: -0.3169 REMARK 3 S21: -0.2235 S22: -0.0566 S23: -0.0886 REMARK 3 S31: 0.2828 S32: 0.0136 S33: 0.0292 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 53 THROUGH 74 ) REMARK 3 ORIGIN FOR THE GROUP (A): 23.8839 -12.1752 -12.9796 REMARK 3 T TENSOR REMARK 3 T11: 0.7993 T22: 0.2905 REMARK 3 T33: 0.7854 T12: 0.0441 REMARK 3 T13: 0.0344 T23: 0.0337 REMARK 3 L TENSOR REMARK 3 L11: 4.2844 L22: 1.6320 REMARK 3 L33: 3.6098 L12: -0.3793 REMARK 3 L13: 2.5009 L23: 0.0823 REMARK 3 S TENSOR REMARK 3 S11: 0.3518 S12: 0.2276 S13: -1.4053 REMARK 3 S21: -0.3263 S22: -0.5054 S23: -0.7602 REMARK 3 S31: 1.4125 S32: 0.5326 S33: 0.6359 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 51 THROUGH 81 ) REMARK 3 ORIGIN FOR THE GROUP (A): 20.9653 10.8431 -16.7805 REMARK 3 T TENSOR REMARK 3 T11: 0.5705 T22: 0.3242 REMARK 3 T33: 0.3013 T12: -0.1056 REMARK 3 T13: 0.0550 T23: -0.0450 REMARK 3 L TENSOR REMARK 3 L11: 5.1036 L22: 1.6172 REMARK 3 L33: 1.9379 L12: -1.1320 REMARK 3 L13: 0.2336 L23: -0.5769 REMARK 3 S TENSOR REMARK 3 S11: -0.0288 S12: -0.7284 S13: 0.4486 REMARK 3 S21: -0.0507 S22: -0.1105 S23: -0.0615 REMARK 3 S31: -0.5412 S32: 0.1319 S33: 0.1247 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 82 THROUGH 186 ) REMARK 3 ORIGIN FOR THE GROUP (A): 4.7609 26.6355 -13.1270 REMARK 3 T TENSOR REMARK 3 T11: 0.4316 T22: 0.2967 REMARK 3 T33: 0.3161 T12: -0.0491 REMARK 3 T13: -0.0391 T23: 0.0132 REMARK 3 L TENSOR REMARK 3 L11: 2.2848 L22: 2.8043 REMARK 3 L33: 2.5979 L12: -0.6808 REMARK 3 L13: -0.5175 L23: -0.0530 REMARK 3 S TENSOR REMARK 3 S11: 0.0289 S12: 0.0876 S13: 0.3242 REMARK 3 S21: -0.2473 S22: -0.0009 S23: 0.0110 REMARK 3 S31: -0.2823 S32: -0.0155 S33: -0.0417 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 53 THROUGH 73 ) REMARK 3 ORIGIN FOR THE GROUP (A): 2.8756 38.8158 -12.4239 REMARK 3 T TENSOR REMARK 3 T11: 0.9029 T22: 0.3433 REMARK 3 T33: 0.7075 T12: 0.1218 REMARK 3 T13: -0.0222 T23: 0.0009 REMARK 3 L TENSOR REMARK 3 L11: 2.3265 L22: 1.8178 REMARK 3 L33: 3.0745 L12: -0.6401 REMARK 3 L13: -0.4119 L23: -0.8566 REMARK 3 S TENSOR REMARK 3 S11: 0.1760 S12: 0.2295 S13: 0.8271 REMARK 3 S21: -0.2804 S22: -0.4853 S23: -0.1974 REMARK 3 S31: -0.9456 S32: -0.3855 S33: 0.2912 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: RESIDUE C156 HARBOURS A COVALENT REMARK 3 MODIFICATION THAT WAS INTERPRETED AS BME. REMARK 4 REMARK 4 4D2M COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 12-MAY-14. REMARK 100 THE DEPOSITION ID IS D_1290060576. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.2 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : AUSTRALIAN SYNCHROTRON REMARK 200 BEAMLINE : MX2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.95 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 23011 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.100 REMARK 200 RESOLUTION RANGE LOW (A) : 46.540 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 11.70 REMARK 200 R MERGE (I) : 0.06000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 23.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.21 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 12.00 REMARK 200 R MERGE FOR SHELL (I) : 0.48000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 5.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 2VTY REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 35.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.90 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M KCL, 15 % PEG400, 1.44 % MPD AND REMARK 280 0.1M AMMONIUM CITRATE PH 6.2. REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 116.34250 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 28.25150 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 28.25150 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 58.17125 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 28.25150 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 28.25150 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 174.51375 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 28.25150 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 28.25150 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 58.17125 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 28.25150 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 28.25150 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 174.51375 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 116.34250 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: OCTAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: OCTAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 24260 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 25780 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -285.7 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 CL CL A1189 LIES ON A SPECIAL POSITION. REMARK 375 CL CL C1188 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 5 REMARK 465 GLY A 6 REMARK 465 SER A 7 REMARK 465 HIS A 8 REMARK 465 HIS A 9 REMARK 465 HIS A 10 REMARK 465 HIS A 11 REMARK 465 HIS A 12 REMARK 465 HIS A 13 REMARK 465 SER A 14 REMARK 465 GLN A 15 REMARK 465 ASP A 16 REMARK 465 PRO A 17 REMARK 465 VAL A 18 REMARK 465 GLN A 19 REMARK 465 ASP A 20 REMARK 465 ILE A 21 REMARK 465 GLU A 22 REMARK 465 ASP A 23 REMARK 465 GLU A 24 REMARK 465 ALA A 25 REMARK 465 SER A 26 REMARK 465 ASN A 27 REMARK 465 ASN A 28 REMARK 465 VAL A 29 REMARK 465 ASP A 30 REMARK 465 HIS A 31 REMARK 465 ASP A 32 REMARK 465 TYR A 33 REMARK 465 VAL A 34 REMARK 465 TYR A 35 REMARK 465 PRO A 36 REMARK 465 LEU A 37 REMARK 465 PRO A 38 REMARK 465 GLU A 39 REMARK 465 ASN A 40 REMARK 465 MET A 41 REMARK 465 VAL A 42 REMARK 465 TYR A 43 REMARK 465 ARG A 44 REMARK 465 PHE A 45 REMARK 465 ASP A 46 REMARK 465 LYS A 47 REMARK 465 SER A 48 REMARK 465 THR A 49 REMARK 465 ASN A 50 REMARK 465 ASP B 51 REMARK 465 MET B 52 REMARK 465 ARG B 75 REMARK 465 ARG B 76 REMARK 465 MET C 5 REMARK 465 GLY C 6 REMARK 465 SER C 7 REMARK 465 HIS C 8 REMARK 465 HIS C 9 REMARK 465 HIS C 10 REMARK 465 HIS C 11 REMARK 465 HIS C 12 REMARK 465 HIS C 13 REMARK 465 SER C 14 REMARK 465 GLN C 15 REMARK 465 ASP C 16 REMARK 465 PRO C 17 REMARK 465 VAL C 18 REMARK 465 GLN C 19 REMARK 465 ASP C 20 REMARK 465 ILE C 21 REMARK 465 GLU C 22 REMARK 465 ASP C 23 REMARK 465 GLU C 24 REMARK 465 ALA C 25 REMARK 465 SER C 26 REMARK 465 ASN C 27 REMARK 465 ASN C 28 REMARK 465 VAL C 29 REMARK 465 ASP C 30 REMARK 465 HIS C 31 REMARK 465 ASP C 32 REMARK 465 TYR C 33 REMARK 465 VAL C 34 REMARK 465 TYR C 35 REMARK 465 PRO C 36 REMARK 465 LEU C 37 REMARK 465 PRO C 38 REMARK 465 GLU C 39 REMARK 465 ASN C 40 REMARK 465 MET C 41 REMARK 465 VAL C 42 REMARK 465 TYR C 43 REMARK 465 ARG C 44 REMARK 465 PHE C 45 REMARK 465 ASP C 46 REMARK 465 LYS C 47 REMARK 465 SER C 48 REMARK 465 THR C 49 REMARK 465 ASN C 50 REMARK 465 ASP D 51 REMARK 465 MET D 52 REMARK 465 ALA D 74 REMARK 465 ARG D 75 REMARK 465 ARG D 76 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O ILE A 185 O HOH A 2059 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 55 68.77 -104.89 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A2063 DISTANCE = 7.94 ANGSTROMS REMARK 525 HOH B2003 DISTANCE = 8.73 ANGSTROMS REMARK 525 HOH C2006 DISTANCE = 6.98 ANGSTROMS REMARK 525 HOH C2048 DISTANCE = 6.80 ANGSTROMS REMARK 525 HOH C2050 DISTANCE = 9.43 ANGSTROMS REMARK 525 HOH C2051 DISTANCE = 6.77 ANGSTROMS REMARK 525 HOH C2052 DISTANCE = 6.54 ANGSTROMS REMARK 525 HOH C2053 DISTANCE = 6.29 ANGSTROMS REMARK 525 HOH D2009 DISTANCE = 9.56 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MRD A 1188 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 1189 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL C 1188 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 1190 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 1191 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4D2L RELATED DB: PDB REMARK 900 VACCINIA VIRUS F1L BOUND TO BIM BH3 DBREF 4D2M A 18 186 UNP O57173 F1_VACCA 18 186 DBREF 4D2M B 51 76 UNP O43521 B2L11_HUMAN 141 166 DBREF 4D2M C 18 186 UNP O57173 F1_VACCA 18 186 DBREF 4D2M D 51 76 UNP O43521 B2L11_HUMAN 141 166 SEQADV 4D2M MET A 5 UNP O57173 EXPRESSION TAG SEQADV 4D2M GLY A 6 UNP O57173 EXPRESSION TAG SEQADV 4D2M SER A 7 UNP O57173 EXPRESSION TAG SEQADV 4D2M HIS A 8 UNP O57173 EXPRESSION TAG SEQADV 4D2M HIS A 9 UNP O57173 EXPRESSION TAG SEQADV 4D2M HIS A 10 UNP O57173 EXPRESSION TAG SEQADV 4D2M HIS A 11 UNP O57173 EXPRESSION TAG SEQADV 4D2M HIS A 12 UNP O57173 EXPRESSION TAG SEQADV 4D2M HIS A 13 UNP O57173 EXPRESSION TAG SEQADV 4D2M SER A 14 UNP O57173 EXPRESSION TAG SEQADV 4D2M GLN A 15 UNP O57173 EXPRESSION TAG SEQADV 4D2M ASP A 16 UNP O57173 EXPRESSION TAG SEQADV 4D2M PRO A 17 UNP O57173 EXPRESSION TAG SEQADV 4D2M PHE A 125 UNP O57173 ILE 125 ENGINEERED MUTATION SEQADV 4D2M MET A 133 UNP O57173 LEU 133 CONFLICT SEQADV 4D2M LEU A 134 UNP O57173 MET 134 CONFLICT SEQADV 4D2M MET C 5 UNP O57173 EXPRESSION TAG SEQADV 4D2M GLY C 6 UNP O57173 EXPRESSION TAG SEQADV 4D2M SER C 7 UNP O57173 EXPRESSION TAG SEQADV 4D2M HIS C 8 UNP O57173 EXPRESSION TAG SEQADV 4D2M HIS C 9 UNP O57173 EXPRESSION TAG SEQADV 4D2M HIS C 10 UNP O57173 EXPRESSION TAG SEQADV 4D2M HIS C 11 UNP O57173 EXPRESSION TAG SEQADV 4D2M HIS C 12 UNP O57173 EXPRESSION TAG SEQADV 4D2M HIS C 13 UNP O57173 EXPRESSION TAG SEQADV 4D2M SER C 14 UNP O57173 EXPRESSION TAG SEQADV 4D2M GLN C 15 UNP O57173 EXPRESSION TAG SEQADV 4D2M ASP C 16 UNP O57173 EXPRESSION TAG SEQADV 4D2M PRO C 17 UNP O57173 EXPRESSION TAG SEQADV 4D2M PHE C 125 UNP O57173 ILE 125 ENGINEERED MUTATION SEQADV 4D2M MET C 133 UNP O57173 LEU 133 CONFLICT SEQADV 4D2M LEU C 134 UNP O57173 MET 134 CONFLICT SEQRES 1 A 182 MET GLY SER HIS HIS HIS HIS HIS HIS SER GLN ASP PRO SEQRES 2 A 182 VAL GLN ASP ILE GLU ASP GLU ALA SER ASN ASN VAL ASP SEQRES 3 A 182 HIS ASP TYR VAL TYR PRO LEU PRO GLU ASN MET VAL TYR SEQRES 4 A 182 ARG PHE ASP LYS SER THR ASN ILE LEU ASP TYR LEU SER SEQRES 5 A 182 THR GLU ARG ASP HIS VAL MET MET ALA VAL ARG TYR TYR SEQRES 6 A 182 MET SER LYS GLN ARG LEU ASP ASP LEU TYR ARG GLN LEU SEQRES 7 A 182 PRO THR LYS THR ARG SER TYR ILE ASP ILE ILE ASN ILE SEQRES 8 A 182 TYR CYS ASP LYS VAL SER ASN ASP TYR ASN ARG ASP MET SEQRES 9 A 182 ASN ILE MET TYR ASP MET ALA SER THR LYS SER PHE THR SEQRES 10 A 182 VAL TYR ASP PHE ASN ASN GLU VAL ASN THR ILE MET LEU SEQRES 11 A 182 ASP ASN LYS GLY LEU GLY VAL ARG LEU ALA THR ILE SER SEQRES 12 A 182 PHE ILE THR GLU LEU GLY ARG ARG CME MET ASN PRO VAL SEQRES 13 A 182 LYS THR ILE LYS MET PHE THR LEU LEU SER HIS THR ILE SEQRES 14 A 182 CYS ASP ASP CYS PHE VAL ASP TYR ILE THR ASP ILE SER SEQRES 1 B 26 ASP MET ARG PRO GLU ILE TRP ILE ALA GLN GLU LEU ARG SEQRES 2 B 26 ARG ILE GLY ASP GLU PHE ASN ALA TYR TYR ALA ARG ARG SEQRES 1 C 182 MET GLY SER HIS HIS HIS HIS HIS HIS SER GLN ASP PRO SEQRES 2 C 182 VAL GLN ASP ILE GLU ASP GLU ALA SER ASN ASN VAL ASP SEQRES 3 C 182 HIS ASP TYR VAL TYR PRO LEU PRO GLU ASN MET VAL TYR SEQRES 4 C 182 ARG PHE ASP LYS SER THR ASN ILE LEU ASP TYR LEU SER SEQRES 5 C 182 THR GLU ARG ASP HIS VAL MET MET ALA VAL ARG TYR TYR SEQRES 6 C 182 MET SER LYS GLN ARG LEU ASP ASP LEU TYR ARG GLN LEU SEQRES 7 C 182 PRO THR LYS THR ARG SER TYR ILE ASP ILE ILE ASN ILE SEQRES 8 C 182 TYR CYS ASP LYS VAL SER ASN ASP TYR ASN ARG ASP MET SEQRES 9 C 182 ASN ILE MET TYR ASP MET ALA SER THR LYS SER PHE THR SEQRES 10 C 182 VAL TYR ASP PHE ASN ASN GLU VAL ASN THR ILE MET LEU SEQRES 11 C 182 ASP ASN LYS GLY LEU GLY VAL ARG LEU ALA THR ILE SER SEQRES 12 C 182 PHE ILE THR GLU LEU GLY ARG ARG CME MET ASN PRO VAL SEQRES 13 C 182 LYS THR ILE LYS MET PHE THR LEU LEU SER HIS THR ILE SEQRES 14 C 182 CYS ASP ASP CYS PHE VAL ASP TYR ILE THR ASP ILE SER SEQRES 1 D 26 ASP MET ARG PRO GLU ILE TRP ILE ALA GLN GLU LEU ARG SEQRES 2 D 26 ARG ILE GLY ASP GLU PHE ASN ALA TYR TYR ALA ARG ARG MODRES 4D2M CME A 156 CYS S,S-(2-HYDROXYETHYL)THIOCYSTEINE MODRES 4D2M CME C 156 CYS S,S-(2-HYDROXYETHYL)THIOCYSTEINE HET CME A 156 18 HET CME C 156 18 HET MRD A1188 22 HET CL A1189 1 HET CL A1190 1 HET CL A1191 1 HET CL C1188 1 HETNAM CME S,S-(2-HYDROXYETHYL)THIOCYSTEINE HETNAM MRD (4R)-2-METHYLPENTANE-2,4-DIOL HETNAM CL CHLORIDE ION FORMUL 1 CME 2(C5 H11 N O3 S2) FORMUL 5 MRD C6 H14 O2 FORMUL 6 CL 4(CL 1-) FORMUL 10 HOH *123(H2 O) HELIX 1 1 THR A 57 LEU A 82 1 26 HELIX 2 2 PRO A 83 TYR A 104 1 22 HELIX 3 3 TYR A 104 SER A 116 1 13 HELIX 4 4 THR A 121 ASN A 136 1 16 HELIX 5 5 GLY A 138 ARG A 155 1 18 HELIX 6 6 ASN A 158 CYS A 174 1 17 HELIX 7 7 ASP A 175 ILE A 185 1 11 HELIX 8 8 ARG B 53 ALA B 74 1 22 HELIX 9 9 THR C 57 LEU C 82 1 26 HELIX 10 10 PRO C 83 TYR C 104 1 22 HELIX 11 11 TYR C 104 SER C 116 1 13 HELIX 12 12 THR C 121 ASN C 136 1 16 HELIX 13 13 GLY C 138 ARG C 155 1 18 HELIX 14 14 ASN C 158 CYS C 174 1 17 HELIX 15 15 ASP C 175 SER C 186 1 12 HELIX 16 16 ARG D 53 TYR D 73 1 21 LINK C ARG A 155 N CME A 156 1555 1555 1.33 LINK C CME A 156 N MET A 157 1555 1555 1.33 LINK C ARG C 155 N CME C 156 1555 1555 1.33 LINK C CME C 156 N MET C 157 1555 1555 1.33 SITE 1 AC1 5 SER A 71 CL A1191 SER C 71 LEU C 75 SITE 2 AC1 5 ILE C 163 SITE 1 AC2 1 LYS A 164 SITE 1 AC3 2 LYS C 161 HOH C2043 SITE 1 AC4 1 ARG A 74 SITE 1 AC5 1 MRD A1188 CRYST1 56.503 56.503 232.685 90.00 90.00 90.00 P 41 21 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017698 0.000000 0.000000 0.00000 SCALE2 0.000000 0.017698 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004298 0.00000