HEADER HYDROLASE 24-OCT-14 4D3X TITLE THE STRUCTURE OF MATURE LEGUMAIN FROM CHINESE HAMSTER. COMPND MOL_ID: 1; COMPND 2 MOLECULE: LEGUMAIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: ASPARAGINYL ENDOPEPTIDASE DOMAIN, RESIDUES 31-314; COMPND 5 EC: 3.4.22.34 SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CRICETULUS GRISEUS; SOURCE 3 ORGANISM_COMMON: CHINESE HAMSTER; SOURCE 4 ORGANISM_TAXID: 10029; SOURCE 5 CELL_LINE: LEC3.8.2.1; SOURCE 6 ORGAN: OVARY KEYWDS HYDROLASE, CYSTEINE PROTEASE EXPDTA X-RAY DIFFRACTION AUTHOR W.LI,D.W.HEINZ,J.KRAUSZE REVDAT 4 20-DEC-23 4D3X 1 REMARK REVDAT 3 15-NOV-23 4D3X 1 HETSYN LINK ATOM REVDAT 2 29-JUL-20 4D3X 1 COMPND REMARK HETNAM LINK REVDAT 2 2 1 SITE REVDAT 1 20-JAN-16 4D3X 0 JRNL AUTH W.LI,M.DAMME,K.BUESSOW,I.GRIMM,J.VAN DEN HEUVEL,D.W.HEINZ, JRNL AUTH 2 J.KRAUSZE JRNL TITL A DETAILED LOOK INTO CHINESE HAMSTER LEGUMAIN ACTIVE SITE JRNL TITL 2 STRUCTURE AND EXPLORATION OF ITS FUNCTION JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.85 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.85 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 37.78 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.590 REMARK 3 COMPLETENESS FOR RANGE (%) : 88.7 REMARK 3 NUMBER OF REFLECTIONS : 33928 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.177 REMARK 3 R VALUE (WORKING SET) : 0.174 REMARK 3 FREE R VALUE : 0.230 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1687 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 37.7839 - 4.2299 1.00 3025 156 0.1296 0.1805 REMARK 3 2 4.2299 - 3.3581 1.00 3001 158 0.1285 0.1730 REMARK 3 3 3.3581 - 2.9338 1.00 3042 160 0.1728 0.2201 REMARK 3 4 2.9338 - 2.6656 1.00 3043 159 0.1892 0.2633 REMARK 3 5 2.6656 - 2.4746 1.00 3028 162 0.1858 0.2205 REMARK 3 6 2.4746 - 2.3287 1.00 3013 156 0.2009 0.2702 REMARK 3 7 2.3287 - 2.2121 1.00 2988 154 0.1878 0.2947 REMARK 3 8 2.2121 - 2.1158 0.99 3050 162 0.2126 0.2300 REMARK 3 9 2.1158 - 2.0344 0.97 2929 153 0.2340 0.3298 REMARK 3 10 2.0344 - 1.9642 0.86 2574 135 0.2366 0.3257 REMARK 3 11 1.9642 - 1.9028 0.63 1867 96 0.2504 0.3412 REMARK 3 12 1.9028 - 1.8484 0.22 681 36 0.2933 0.3249 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.230 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 26.030 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 18.42 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 25.80 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 2200 REMARK 3 ANGLE : 1.061 2987 REMARK 3 CHIRALITY : 0.043 315 REMARK 3 PLANARITY : 0.005 386 REMARK 3 DIHEDRAL : 15.773 794 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 10 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 32 THROUGH 74 ) REMARK 3 ORIGIN FOR THE GROUP (A): -52.0446 23.4954 -19.2768 REMARK 3 T TENSOR REMARK 3 T11: 0.1370 T22: 0.0953 REMARK 3 T33: 0.1052 T12: 0.0613 REMARK 3 T13: 0.0327 T23: 0.0810 REMARK 3 L TENSOR REMARK 3 L11: 0.4750 L22: 0.5213 REMARK 3 L33: 0.6641 L12: -0.0619 REMARK 3 L13: 0.0522 L23: -0.2219 REMARK 3 S TENSOR REMARK 3 S11: 0.0578 S12: 0.0401 S13: 0.0553 REMARK 3 S21: -0.0403 S22: 0.0053 S23: 0.0381 REMARK 3 S31: -0.0472 S32: -0.0593 S33: -0.0118 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 75 THROUGH 94 ) REMARK 3 ORIGIN FOR THE GROUP (A): -51.9711 35.6923 -26.5749 REMARK 3 T TENSOR REMARK 3 T11: 0.2417 T22: 0.2199 REMARK 3 T33: 0.2154 T12: 0.1289 REMARK 3 T13: 0.1123 T23: 0.1216 REMARK 3 L TENSOR REMARK 3 L11: 0.0874 L22: 0.5441 REMARK 3 L33: 0.7504 L12: 0.1439 REMARK 3 L13: -0.2049 L23: -0.4570 REMARK 3 S TENSOR REMARK 3 S11: 0.0237 S12: 0.0380 S13: 0.0368 REMARK 3 S21: -0.0187 S22: -0.0191 S23: -0.0317 REMARK 3 S31: -0.0455 S32: -0.0209 S33: -0.0472 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 95 THROUGH 114 ) REMARK 3 ORIGIN FOR THE GROUP (A): -55.2451 27.9897 -23.3660 REMARK 3 T TENSOR REMARK 3 T11: 0.1533 T22: 0.2583 REMARK 3 T33: 0.1782 T12: 0.1091 REMARK 3 T13: 0.0628 T23: 0.1134 REMARK 3 L TENSOR REMARK 3 L11: 1.0322 L22: 0.6611 REMARK 3 L33: 0.6508 L12: -0.0906 REMARK 3 L13: -0.2435 L23: -0.3064 REMARK 3 S TENSOR REMARK 3 S11: 0.0357 S12: -0.0115 S13: 0.0489 REMARK 3 S21: -0.0468 S22: -0.0265 S23: -0.0405 REMARK 3 S31: -0.0433 S32: -0.0534 S33: -0.0019 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 115 THROUGH 129 ) REMARK 3 ORIGIN FOR THE GROUP (A): -66.6376 20.2251 -10.6261 REMARK 3 T TENSOR REMARK 3 T11: 0.1023 T22: 0.3740 REMARK 3 T33: 0.2189 T12: 0.0257 REMARK 3 T13: 0.0137 T23: 0.1723 REMARK 3 L TENSOR REMARK 3 L11: 1.1862 L22: 1.0344 REMARK 3 L33: 0.6289 L12: 0.2415 REMARK 3 L13: 0.3207 L23: 0.0695 REMARK 3 S TENSOR REMARK 3 S11: 0.0058 S12: -0.0107 S13: -0.0029 REMARK 3 S21: -0.0201 S22: 0.0684 S23: 0.1544 REMARK 3 S31: 0.0035 S32: -0.1976 S33: -0.0457 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 130 THROUGH 144 ) REMARK 3 ORIGIN FOR THE GROUP (A): -63.4655 13.4092 -15.2364 REMARK 3 T TENSOR REMARK 3 T11: 0.2040 T22: 0.3449 REMARK 3 T33: 0.3192 T12: -0.1045 REMARK 3 T13: -0.1136 T23: 0.1456 REMARK 3 L TENSOR REMARK 3 L11: 1.3615 L22: 0.5186 REMARK 3 L33: 1.4265 L12: -0.2283 REMARK 3 L13: 0.8774 L23: -0.6238 REMARK 3 S TENSOR REMARK 3 S11: 0.0571 S12: -0.0017 S13: -0.0803 REMARK 3 S21: -0.0592 S22: 0.0329 S23: 0.1721 REMARK 3 S31: 0.0586 S32: -0.1643 S33: -0.1030 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 145 THROUGH 164 ) REMARK 3 ORIGIN FOR THE GROUP (A): -55.4062 28.4801 -8.6050 REMARK 3 T TENSOR REMARK 3 T11: 0.1922 T22: 0.0931 REMARK 3 T33: 0.1116 T12: 0.0735 REMARK 3 T13: 0.0360 T23: 0.0334 REMARK 3 L TENSOR REMARK 3 L11: 0.6030 L22: 1.5676 REMARK 3 L33: 0.9835 L12: -0.2351 REMARK 3 L13: -0.0688 L23: 0.4053 REMARK 3 S TENSOR REMARK 3 S11: 0.0045 S12: -0.0743 S13: 0.0766 REMARK 3 S21: 0.1530 S22: 0.0670 S23: 0.1227 REMARK 3 S31: -0.2414 S32: -0.1891 S33: -0.0016 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 165 THROUGH 218 ) REMARK 3 ORIGIN FOR THE GROUP (A): -54.4229 20.4531 -1.3188 REMARK 3 T TENSOR REMARK 3 T11: 0.1076 T22: 0.1813 REMARK 3 T33: 0.1285 T12: -0.0341 REMARK 3 T13: -0.0016 T23: 0.0904 REMARK 3 L TENSOR REMARK 3 L11: 0.8011 L22: 0.5523 REMARK 3 L33: 1.2131 L12: 0.2752 REMARK 3 L13: -0.3574 L23: -0.6044 REMARK 3 S TENSOR REMARK 3 S11: 0.0973 S12: -0.1538 S13: -0.0003 REMARK 3 S21: 0.1837 S22: 0.0272 S23: 0.1521 REMARK 3 S31: -0.1788 S32: -0.1713 S33: -0.0270 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 219 THROUGH 248 ) REMARK 3 ORIGIN FOR THE GROUP (A): -41.8731 33.7168 -16.0013 REMARK 3 T TENSOR REMARK 3 T11: 0.2322 T22: 0.2106 REMARK 3 T33: 0.2774 T12: -0.0736 REMARK 3 T13: 0.0164 T23: 0.1588 REMARK 3 L TENSOR REMARK 3 L11: 0.3759 L22: 1.3830 REMARK 3 L33: 0.5397 L12: 0.1788 REMARK 3 L13: -0.1023 L23: -0.1192 REMARK 3 S TENSOR REMARK 3 S11: 0.0630 S12: 0.0608 S13: 0.1674 REMARK 3 S21: -0.0316 S22: -0.0299 S23: -0.0049 REMARK 3 S31: -0.2727 S32: 0.1071 S33: -0.1381 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 249 THROUGH 266 ) REMARK 3 ORIGIN FOR THE GROUP (A): -35.8557 18.1899 -9.5609 REMARK 3 T TENSOR REMARK 3 T11: 0.0928 T22: 0.3099 REMARK 3 T33: 0.2299 T12: -0.0408 REMARK 3 T13: -0.0196 T23: 0.1661 REMARK 3 L TENSOR REMARK 3 L11: 1.0497 L22: 0.5730 REMARK 3 L33: 0.6529 L12: 0.1500 REMARK 3 L13: -0.3129 L23: 0.2798 REMARK 3 S TENSOR REMARK 3 S11: -0.0157 S12: 0.0180 S13: 0.0248 REMARK 3 S21: -0.0186 S22: -0.0126 S23: -0.1106 REMARK 3 S31: -0.0408 S32: 0.1572 S33: -0.0381 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 267 THROUGH 292 ) REMARK 3 ORIGIN FOR THE GROUP (A): -42.6846 16.9136 -6.3511 REMARK 3 T TENSOR REMARK 3 T11: 0.1036 T22: 0.1486 REMARK 3 T33: 0.1963 T12: -0.0284 REMARK 3 T13: -0.0510 T23: 0.1202 REMARK 3 L TENSOR REMARK 3 L11: 0.3158 L22: 0.8011 REMARK 3 L33: 1.3522 L12: -0.2025 REMARK 3 L13: 0.2298 L23: -0.5956 REMARK 3 S TENSOR REMARK 3 S11: -0.0206 S12: -0.0397 S13: 0.0090 REMARK 3 S21: -0.0018 S22: -0.1040 S23: -0.1165 REMARK 3 S31: -0.0226 S32: 0.1486 S33: -0.0371 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4D3X COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 24-OCT-14. REMARK 100 THE DEPOSITION ID IS D_1290061827. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 05-DEC-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID23-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.84402 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 33931 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.850 REMARK 200 RESOLUTION RANGE LOW (A) : 38.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 88.7 REMARK 200 DATA REDUNDANCY : 6.100 REMARK 200 R MERGE (I) : 0.05000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 25.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.85 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.90 REMARK 200 COMPLETENESS FOR SHELL (%) : 19.2 REMARK 200 DATA REDUNDANCY IN SHELL : 1.60 REMARK 200 R MERGE FOR SHELL (I) : 0.01000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 4.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 4AWA REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 31.50 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.79 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M NACL, 23%(W/V) PEG 3350, 0.1 M REMARK 280 MOPS PH 6.5; THEN 10%(V/V) GLYCEROL WERE ADDED FOR CRYO- REMARK 280 PROTECTION REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 69.94000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 139.88000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 104.91000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 174.85000 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 34.97000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 31 REMARK 465 HIS A 293 REMARK 465 SER A 294 REMARK 465 THR A 295 REMARK 465 SER A 296 REMARK 465 SER A 297 REMARK 465 PRO A 298 REMARK 465 ILE A 299 REMARK 465 SER A 300 REMARK 465 LEU A 301 REMARK 465 PRO A 302 REMARK 465 PRO A 303 REMARK 465 VAL A 304 REMARK 465 THR A 305 REMARK 465 ARG A 306 REMARK 465 LEU A 307 REMARK 465 ASP A 308 REMARK 465 LEU A 309 REMARK 465 THR A 310 REMARK 465 PRO A 311 REMARK 465 SER A 312 REMARK 465 PRO A 313 REMARK 465 GLU A 314 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 48 -49.88 -28.54 REMARK 500 ASP A 77 40.32 71.79 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 THR A 151 11.65 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4D3Y RELATED DB: PDB REMARK 900 THE STRUCTURE OF INACTIVE PROLEGUMAIN FROM CHINESE HAMSTER. REMARK 900 RELATED ID: 4D3Z RELATED DB: PDB REMARK 900 THE STRUCTURE OF INACTIVE PROLEGUMAIN FROM CHINESE HAMSTER, REMARK 900 TRIGONAL SPACE GROUP. DBREF 4D3X A 31 314 UNP G3I1H5 G3I1H5_CRIGR 31 314 SEQRES 1 A 284 ALA GLY LYS HIS TRP VAL VAL ILE VAL ALA GLY SER ASN SEQRES 2 A 284 GLY TRP TYR ASN TYR ARG HIS GLN ALA ASP ALA CYS HIS SEQRES 3 A 284 ALA TYR GLN ILE ILE HIS ARG ASN GLY ILE PRO ASP GLU SEQRES 4 A 284 GLN ILE ILE VAL MET MET TYR ASP ASP ILE ALA ASN SER SEQRES 5 A 284 GLU ASP ASN PRO THR PRO GLY ILE VAL ILE ASN ARG PRO SEQRES 6 A 284 ASN GLY THR ASP VAL TYR ALA GLY VAL LEU LYS ASP TYR SEQRES 7 A 284 THR GLY GLU ASP VAL THR PRO GLU ASN PHE LEU ALA VAL SEQRES 8 A 284 LEU ARG GLY ASP ALA GLU ALA VAL LYS GLY LYS GLY SER SEQRES 9 A 284 GLY LYS VAL LEU ARG SER GLY PRO GLN ASP HIS VAL PHE SEQRES 10 A 284 VAL TYR PHE THR SNN HIS GLY ALA THR GLY LEU LEU VAL SEQRES 11 A 284 PHE PRO ASN GLU ASP LEU HIS VAL LYS ASP LEU ASN LYS SEQRES 12 A 284 THR ILE ARG TYR MET TYR GLU HIS LYS MET TYR GLN LYS SEQRES 13 A 284 MET VAL PHE TYR ILE GLU ALA CSO GLU SER GLY SER MET SEQRES 14 A 284 MET ASN HIS LEU PRO ASN ASP ILE ASN VAL TYR ALA THR SEQRES 15 A 284 THR ALA ALA ASN PRO HIS GLU SER SER TYR ALA CYS TYR SEQRES 16 A 284 TYR ASP GLU GLU ARG ASN THR TYR LEU GLY ASP TRP TYR SEQRES 17 A 284 SER VAL ASN TRP MET GLU ASP SER ASP VAL GLU ASP LEU SEQRES 18 A 284 THR LYS GLU THR LEU HIS LYS GLN TYR HIS LEU VAL LYS SEQRES 19 A 284 SER HIS THR ASN THR SER HIS VAL MET GLN TYR GLY ASN SEQRES 20 A 284 LYS SER ILE SER THR MET LYS VAL MET GLN PHE GLN GLY SEQRES 21 A 284 MET LYS HIS SER THR SER SER PRO ILE SER LEU PRO PRO SEQRES 22 A 284 VAL THR ARG LEU ASP LEU THR PRO SER PRO GLU MODRES 4D3X ASN A 172 ASN GLYCOSYLATION SITE MODRES 4D3X ASN A 277 ASN GLYCOSYLATION SITE MODRES 4D3X SNN A 152 ASN L-3-AMINOSUCCINIMIDE MODRES 4D3X CSO A 194 CYS S-HYDROXYCYSTEINE HET SNN A 152 8 HET CSO A 194 14 HET NAG A1293 14 HET NAG A1294 14 HETNAM SNN L-3-AMINOSUCCINIMIDE HETNAM CSO S-HYDROXYCYSTEINE HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE FORMUL 1 SNN C4 H6 N2 O2 FORMUL 1 CSO C3 H7 N O3 S FORMUL 2 NAG 2(C8 H15 N O6) FORMUL 4 HOH *146(H2 O) HELIX 1 1 GLY A 44 TYR A 46 5 3 HELIX 2 2 ASN A 47 ASN A 64 1 18 HELIX 3 3 PRO A 67 GLU A 69 5 3 HELIX 4 4 THR A 109 VAL A 113 5 5 HELIX 5 5 THR A 114 GLY A 124 1 11 HELIX 6 6 ASP A 125 LYS A 130 5 6 HELIX 7 7 VAL A 168 HIS A 181 1 14 HELIX 8 8 GLU A 195 MET A 200 5 6 HELIX 9 9 TRP A 237 GLU A 249 1 13 HELIX 10 10 THR A 255 THR A 267 1 13 HELIX 11 11 LYS A 278 MET A 283 5 6 HELIX 12 12 VAL A 285 GLY A 290 1 6 SHEET 1 AA 6 ILE A 71 MET A 74 0 SHEET 2 AA 6 HIS A 34 ALA A 40 1 O VAL A 36 N ILE A 72 SHEET 3 AA 6 HIS A 145 THR A 151 1 O HIS A 145 N TRP A 35 SHEET 4 AA 6 LYS A 186 ILE A 191 1 O LYS A 186 N VAL A 146 SHEET 5 AA 6 VAL A 209 THR A 213 1 O TYR A 210 N PHE A 189 SHEET 6 AA 6 MET A 273 GLY A 276 -1 O MET A 273 N THR A 213 SHEET 1 AB 2 LEU A 158 VAL A 160 0 SHEET 2 AB 2 ASP A 165 HIS A 167 -1 O LEU A 166 N LEU A 159 SHEET 1 AC 2 ALA A 223 ASP A 227 0 SHEET 2 AC 2 THR A 232 ASP A 236 -1 O THR A 232 N ASP A 227 LINK C THR A 151 N SNN A 152 1555 1555 1.42 LINK N1 SNN A 152 CA HIS A 153 1555 1555 1.43 LINK ND2 ASN A 172 C1 NAG A1294 1555 1555 1.55 LINK C ALA A 193 N ACSO A 194 1555 1555 1.33 LINK C ALA A 193 N BCSO A 194 1555 1555 1.33 LINK C BCSO A 194 N GLU A 195 1555 1555 1.33 LINK C ACSO A 194 N GLU A 195 1555 1555 1.33 LINK ND2 ASN A 277 C1 NAG A1293 1555 1555 1.41 CRYST1 43.620 43.620 209.820 90.00 90.00 120.00 P 61 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.022925 0.013236 0.000000 0.00000 SCALE2 0.000000 0.026472 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004766 0.00000