data_4D3Y # _entry.id 4D3Y # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.383 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4D3Y pdb_00004d3y 10.2210/pdb4d3y/pdb PDBE EBI-61828 ? ? WWPDB D_1290061828 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.content_type _pdbx_database_related.details PDB 4D3X unspecified 'THE STRUCTURE OF MATURE LEGUMAIN FROM CHINESE HAMSTER.' PDB 4D3Z unspecified 'THE STRUCTURE OF INACTIVE PROLEGUMAIN FROM CHINESE HAMSTER, TRIGONAL SPACE GROUP.' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4D3Y _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2014-10-24 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Li, W.' 1 'Heinz, D.W.' 2 'Krausze, J.' 3 # _citation.id primary _citation.title 'A Detailed Look Into Chinese Hamster Legumain Active Site Structure and Exploration of its Function' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Li, W.' 1 ? primary 'Damme, M.' 2 ? primary 'Buessow, K.' 3 ? primary 'Grimm, I.' 4 ? primary 'Van Den Heuvel, J.' 5 ? primary 'Heinz, D.W.' 6 ? primary 'Krausze, J.' 7 ? # _cell.entry_id 4D3Y _cell.length_a 38.270 _cell.length_b 60.330 _cell.length_c 153.950 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4D3Y _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer nat LEGUMAIN 46625.758 1 3.4.22.34 ? 'RESIDUES 31-438' ? 2 non-polymer man 2-acetamido-2-deoxy-beta-D-glucopyranose 221.208 3 ? ? ? ? 3 non-polymer syn GLYCEROL 92.094 1 ? ? ? ? 4 water nat water 18.015 40 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;AGKHWVVIVAGSNGWYNYRHQADACHAYQIIHRNGIPDEQIIVMMYDDIANSEDNPTPGIVINRPNGTDVYAGVLKDYTG EDVTPENFLAVLRGDAEAVKGKGSGKVLRSGPQDHVFVYFT(SNN)HGATGLLVFPNEDLHVKDLNKTIRYMYEHKMYQK MVFYIEA(CSX)ESGSMMNHLPNDINVYATTAANPHESSYACYYDEERNTYLGDWYSVNWMEDSDVEDLTKETLHKQYHL VKSHTNTSHVMQYGNKSISTMKVMQFQGMKHSTSSPISLPPVTRLDLTPSPEVPLTILKRKLMSTNDLKQSQNLVGQIQR LLDARHVIEKSVHKIVSLLAGFGETAERLLSERAVLMAHDCYQEAVTHFRTHCFNWHSPTYEYALRHLYVLANLCEKPYP IDRIKMAMDKVCLSHY ; _entity_poly.pdbx_seq_one_letter_code_can ;AGKHWVVIVAGSNGWYNYRHQADACHAYQIIHRNGIPDEQIIVMMYDDIANSEDNPTPGIVINRPNGTDVYAGVLKDYTG EDVTPENFLAVLRGDAEAVKGKGSGKVLRSGPQDHVFVYFTNHGATGLLVFPNEDLHVKDLNKTIRYMYEHKMYQKMVFY IEACESGSMMNHLPNDINVYATTAANPHESSYACYYDEERNTYLGDWYSVNWMEDSDVEDLTKETLHKQYHLVKSHTNTS HVMQYGNKSISTMKVMQFQGMKHSTSSPISLPPVTRLDLTPSPEVPLTILKRKLMSTNDLKQSQNLVGQIQRLLDARHVI EKSVHKIVSLLAGFGETAERLLSERAVLMAHDCYQEAVTHFRTHCFNWHSPTYEYALRHLYVLANLCEKPYPIDRIKMAM DKVCLSHY ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ALA n 1 2 GLY n 1 3 LYS n 1 4 HIS n 1 5 TRP n 1 6 VAL n 1 7 VAL n 1 8 ILE n 1 9 VAL n 1 10 ALA n 1 11 GLY n 1 12 SER n 1 13 ASN n 1 14 GLY n 1 15 TRP n 1 16 TYR n 1 17 ASN n 1 18 TYR n 1 19 ARG n 1 20 HIS n 1 21 GLN n 1 22 ALA n 1 23 ASP n 1 24 ALA n 1 25 CYS n 1 26 HIS n 1 27 ALA n 1 28 TYR n 1 29 GLN n 1 30 ILE n 1 31 ILE n 1 32 HIS n 1 33 ARG n 1 34 ASN n 1 35 GLY n 1 36 ILE n 1 37 PRO n 1 38 ASP n 1 39 GLU n 1 40 GLN n 1 41 ILE n 1 42 ILE n 1 43 VAL n 1 44 MET n 1 45 MET n 1 46 TYR n 1 47 ASP n 1 48 ASP n 1 49 ILE n 1 50 ALA n 1 51 ASN n 1 52 SER n 1 53 GLU n 1 54 ASP n 1 55 ASN n 1 56 PRO n 1 57 THR n 1 58 PRO n 1 59 GLY n 1 60 ILE n 1 61 VAL n 1 62 ILE n 1 63 ASN n 1 64 ARG n 1 65 PRO n 1 66 ASN n 1 67 GLY n 1 68 THR n 1 69 ASP n 1 70 VAL n 1 71 TYR n 1 72 ALA n 1 73 GLY n 1 74 VAL n 1 75 LEU n 1 76 LYS n 1 77 ASP n 1 78 TYR n 1 79 THR n 1 80 GLY n 1 81 GLU n 1 82 ASP n 1 83 VAL n 1 84 THR n 1 85 PRO n 1 86 GLU n 1 87 ASN n 1 88 PHE n 1 89 LEU n 1 90 ALA n 1 91 VAL n 1 92 LEU n 1 93 ARG n 1 94 GLY n 1 95 ASP n 1 96 ALA n 1 97 GLU n 1 98 ALA n 1 99 VAL n 1 100 LYS n 1 101 GLY n 1 102 LYS n 1 103 GLY n 1 104 SER n 1 105 GLY n 1 106 LYS n 1 107 VAL n 1 108 LEU n 1 109 ARG n 1 110 SER n 1 111 GLY n 1 112 PRO n 1 113 GLN n 1 114 ASP n 1 115 HIS n 1 116 VAL n 1 117 PHE n 1 118 VAL n 1 119 TYR n 1 120 PHE n 1 121 THR n 1 122 SNN n 1 123 HIS n 1 124 GLY n 1 125 ALA n 1 126 THR n 1 127 GLY n 1 128 LEU n 1 129 LEU n 1 130 VAL n 1 131 PHE n 1 132 PRO n 1 133 ASN n 1 134 GLU n 1 135 ASP n 1 136 LEU n 1 137 HIS n 1 138 VAL n 1 139 LYS n 1 140 ASP n 1 141 LEU n 1 142 ASN n 1 143 LYS n 1 144 THR n 1 145 ILE n 1 146 ARG n 1 147 TYR n 1 148 MET n 1 149 TYR n 1 150 GLU n 1 151 HIS n 1 152 LYS n 1 153 MET n 1 154 TYR n 1 155 GLN n 1 156 LYS n 1 157 MET n 1 158 VAL n 1 159 PHE n 1 160 TYR n 1 161 ILE n 1 162 GLU n 1 163 ALA n 1 164 CSX n 1 165 GLU n 1 166 SER n 1 167 GLY n 1 168 SER n 1 169 MET n 1 170 MET n 1 171 ASN n 1 172 HIS n 1 173 LEU n 1 174 PRO n 1 175 ASN n 1 176 ASP n 1 177 ILE n 1 178 ASN n 1 179 VAL n 1 180 TYR n 1 181 ALA n 1 182 THR n 1 183 THR n 1 184 ALA n 1 185 ALA n 1 186 ASN n 1 187 PRO n 1 188 HIS n 1 189 GLU n 1 190 SER n 1 191 SER n 1 192 TYR n 1 193 ALA n 1 194 CYS n 1 195 TYR n 1 196 TYR n 1 197 ASP n 1 198 GLU n 1 199 GLU n 1 200 ARG n 1 201 ASN n 1 202 THR n 1 203 TYR n 1 204 LEU n 1 205 GLY n 1 206 ASP n 1 207 TRP n 1 208 TYR n 1 209 SER n 1 210 VAL n 1 211 ASN n 1 212 TRP n 1 213 MET n 1 214 GLU n 1 215 ASP n 1 216 SER n 1 217 ASP n 1 218 VAL n 1 219 GLU n 1 220 ASP n 1 221 LEU n 1 222 THR n 1 223 LYS n 1 224 GLU n 1 225 THR n 1 226 LEU n 1 227 HIS n 1 228 LYS n 1 229 GLN n 1 230 TYR n 1 231 HIS n 1 232 LEU n 1 233 VAL n 1 234 LYS n 1 235 SER n 1 236 HIS n 1 237 THR n 1 238 ASN n 1 239 THR n 1 240 SER n 1 241 HIS n 1 242 VAL n 1 243 MET n 1 244 GLN n 1 245 TYR n 1 246 GLY n 1 247 ASN n 1 248 LYS n 1 249 SER n 1 250 ILE n 1 251 SER n 1 252 THR n 1 253 MET n 1 254 LYS n 1 255 VAL n 1 256 MET n 1 257 GLN n 1 258 PHE n 1 259 GLN n 1 260 GLY n 1 261 MET n 1 262 LYS n 1 263 HIS n 1 264 SER n 1 265 THR n 1 266 SER n 1 267 SER n 1 268 PRO n 1 269 ILE n 1 270 SER n 1 271 LEU n 1 272 PRO n 1 273 PRO n 1 274 VAL n 1 275 THR n 1 276 ARG n 1 277 LEU n 1 278 ASP n 1 279 LEU n 1 280 THR n 1 281 PRO n 1 282 SER n 1 283 PRO n 1 284 GLU n 1 285 VAL n 1 286 PRO n 1 287 LEU n 1 288 THR n 1 289 ILE n 1 290 LEU n 1 291 LYS n 1 292 ARG n 1 293 LYS n 1 294 LEU n 1 295 MET n 1 296 SER n 1 297 THR n 1 298 ASN n 1 299 ASP n 1 300 LEU n 1 301 LYS n 1 302 GLN n 1 303 SER n 1 304 GLN n 1 305 ASN n 1 306 LEU n 1 307 VAL n 1 308 GLY n 1 309 GLN n 1 310 ILE n 1 311 GLN n 1 312 ARG n 1 313 LEU n 1 314 LEU n 1 315 ASP n 1 316 ALA n 1 317 ARG n 1 318 HIS n 1 319 VAL n 1 320 ILE n 1 321 GLU n 1 322 LYS n 1 323 SER n 1 324 VAL n 1 325 HIS n 1 326 LYS n 1 327 ILE n 1 328 VAL n 1 329 SER n 1 330 LEU n 1 331 LEU n 1 332 ALA n 1 333 GLY n 1 334 PHE n 1 335 GLY n 1 336 GLU n 1 337 THR n 1 338 ALA n 1 339 GLU n 1 340 ARG n 1 341 LEU n 1 342 LEU n 1 343 SER n 1 344 GLU n 1 345 ARG n 1 346 ALA n 1 347 VAL n 1 348 LEU n 1 349 MET n 1 350 ALA n 1 351 HIS n 1 352 ASP n 1 353 CYS n 1 354 TYR n 1 355 GLN n 1 356 GLU n 1 357 ALA n 1 358 VAL n 1 359 THR n 1 360 HIS n 1 361 PHE n 1 362 ARG n 1 363 THR n 1 364 HIS n 1 365 CYS n 1 366 PHE n 1 367 ASN n 1 368 TRP n 1 369 HIS n 1 370 SER n 1 371 PRO n 1 372 THR n 1 373 TYR n 1 374 GLU n 1 375 TYR n 1 376 ALA n 1 377 LEU n 1 378 ARG n 1 379 HIS n 1 380 LEU n 1 381 TYR n 1 382 VAL n 1 383 LEU n 1 384 ALA n 1 385 ASN n 1 386 LEU n 1 387 CYS n 1 388 GLU n 1 389 LYS n 1 390 PRO n 1 391 TYR n 1 392 PRO n 1 393 ILE n 1 394 ASP n 1 395 ARG n 1 396 ILE n 1 397 LYS n 1 398 MET n 1 399 ALA n 1 400 MET n 1 401 ASP n 1 402 LYS n 1 403 VAL n 1 404 CYS n 1 405 LEU n 1 406 SER n 1 407 HIS n 1 408 TYR n # _entity_src_nat.entity_id 1 _entity_src_nat.pdbx_src_id 1 _entity_src_nat.pdbx_alt_source_flag sample _entity_src_nat.pdbx_beg_seq_num ? _entity_src_nat.pdbx_end_seq_num ? _entity_src_nat.common_name 'CHINESE HAMSTER' _entity_src_nat.pdbx_organism_scientific 'CRICETULUS GRISEUS' _entity_src_nat.pdbx_ncbi_taxonomy_id 10029 _entity_src_nat.genus ? _entity_src_nat.species ? _entity_src_nat.strain ? _entity_src_nat.tissue ? _entity_src_nat.tissue_fraction ? _entity_src_nat.pdbx_secretion ? _entity_src_nat.pdbx_fragment ? _entity_src_nat.pdbx_variant ? _entity_src_nat.pdbx_cell_line LEC3.8.2.1 _entity_src_nat.pdbx_atcc ? _entity_src_nat.pdbx_cellular_location ? _entity_src_nat.pdbx_organ OVARY _entity_src_nat.pdbx_organelle ? _entity_src_nat.pdbx_cell ? _entity_src_nat.pdbx_plasmid_name ? _entity_src_nat.pdbx_plasmid_details ? _entity_src_nat.details ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code G3I1H5_CRIGR _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_db_accession G3I1H5 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4D3Y _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 408 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession G3I1H5 _struct_ref_seq.db_align_beg 31 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 438 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 31 _struct_ref_seq.pdbx_auth_seq_align_end 438 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CSX 'L-peptide linking' n 'S-OXY CYSTEINE' ? 'C3 H7 N O3 S' 137.158 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NAG 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-glucopyranose ;N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE ; 'C8 H15 N O6' 221.208 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SNN 'L-peptide linking' n L-3-AMINOSUCCINIMIDE ? 'C4 H6 N2 O2' 114.103 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 4D3Y _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 1.91 _exptl_crystal.density_percent_sol 35.7 _exptl_crystal.description NONE # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '0.03 M MGCL2, 0.03 M CACL2, 10%(W/V) PEG 20000, 20%(V/V) PEG 550 MME, 0.1 MOPS/HEPES PH 7.5' # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector PIXEL _diffrn_detector.type 'DECTRIS PILATUS 6M' _diffrn_detector.pdbx_collection_date 2013-06-26 _diffrn_detector.details MIRRORS # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'SI(111)' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.033191 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'PETRA III, DESY BEAMLINE P11' _diffrn_source.pdbx_synchrotron_site 'PETRA III, DESY' _diffrn_source.pdbx_synchrotron_beamline P11 _diffrn_source.pdbx_wavelength 1.033191 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 4D3Y _reflns.observed_criterion_sigma_I 2.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 20.00 _reflns.d_resolution_high 2.40 _reflns.number_obs 14574 _reflns.number_all ? _reflns.percent_possible_obs 99.7 _reflns.pdbx_Rmerge_I_obs 0.23 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 10.70 _reflns.B_iso_Wilson_estimate 30.26 _reflns.pdbx_redundancy 12.9 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 2.40 _reflns_shell.d_res_low 2.46 _reflns_shell.percent_possible_all 100.0 _reflns_shell.Rmerge_I_obs 1.22 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 2.33 _reflns_shell.pdbx_redundancy 13.5 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 4D3Y _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 14574 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.36 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 19.941 _refine.ls_d_res_high 2.40 _refine.ls_percent_reflns_obs 99.98 _refine.ls_R_factor_obs 0.1714 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.1677 _refine.ls_R_factor_R_free 0.2413 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.0 _refine.ls_number_reflns_R_free 729 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 32.7 _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model 'PDB ENTRY 4FGU' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.30 _refine.pdbx_overall_phase_error 24.05 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 3099 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 48 _refine_hist.number_atoms_solvent 40 _refine_hist.number_atoms_total 3187 _refine_hist.d_res_high 2.40 _refine_hist.d_res_low 19.941 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function f_bond_d 0.008 ? ? 3231 'X-RAY DIFFRACTION' ? f_angle_d 1.139 ? ? 4383 'X-RAY DIFFRACTION' ? f_dihedral_angle_d 14.023 ? ? 1175 'X-RAY DIFFRACTION' ? f_chiral_restr 0.041 ? ? 479 'X-RAY DIFFRACTION' ? f_plane_restr 0.005 ? ? 557 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all 'X-RAY DIFFRACTION' . 2.4000 2.5850 2688 0.2209 100.00 0.3179 . . 141 . . 'X-RAY DIFFRACTION' . 2.5850 2.8444 2720 0.1947 100.00 0.2825 . . 144 . . 'X-RAY DIFFRACTION' . 2.8444 3.2545 2755 0.1787 100.00 0.2733 . . 145 . . 'X-RAY DIFFRACTION' . 3.2545 4.0945 2767 0.1416 100.00 0.2081 . . 145 . . 'X-RAY DIFFRACTION' . 4.0945 19.9413 2915 0.1584 100.00 0.2131 . . 154 . . # _struct.entry_id 4D3Y _struct.title 'The structure of inactive prolegumain from chinese hamster.' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4D3Y _struct_keywords.pdbx_keywords HYDROLASE _struct_keywords.text 'HYDROLASE, CYSTEINE PROTEASE, ASPARAGINYL ENDOPEPTIDASE' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 2 ? E N N 3 ? F N N 4 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLY A 14 ? TYR A 16 ? GLY A 44 TYR A 46 5 ? 3 HELX_P HELX_P2 2 ASN A 17 ? ASN A 34 ? ASN A 47 ASN A 64 1 ? 18 HELX_P HELX_P3 3 PRO A 37 ? GLU A 39 ? PRO A 67 GLU A 69 5 ? 3 HELX_P HELX_P4 4 THR A 79 ? VAL A 83 ? THR A 109 VAL A 113 5 ? 5 HELX_P HELX_P5 5 THR A 84 ? GLY A 94 ? THR A 114 GLY A 124 1 ? 11 HELX_P HELX_P6 6 VAL A 138 ? HIS A 151 ? VAL A 168 HIS A 181 1 ? 14 HELX_P HELX_P7 7 GLU A 165 ? MET A 170 ? GLU A 195 MET A 200 5 ? 6 HELX_P HELX_P8 8 TRP A 207 ? GLU A 219 ? TRP A 237 GLU A 249 1 ? 13 HELX_P HELX_P9 9 THR A 225 ? THR A 237 ? THR A 255 THR A 267 1 ? 13 HELX_P HELX_P10 10 LYS A 248 ? MET A 253 ? LYS A 278 MET A 283 5 ? 6 HELX_P HELX_P11 11 VAL A 255 ? GLY A 260 ? VAL A 285 GLY A 290 1 ? 6 HELX_P HELX_P12 12 GLU A 284 ? LYS A 291 ? GLU A 314 LYS A 321 1 ? 8 HELX_P HELX_P13 13 GLY A 308 ? GLY A 333 ? GLY A 338 GLY A 363 1 ? 26 HELX_P HELX_P14 14 GLY A 335 ? GLU A 344 ? GLY A 365 GLU A 374 1 ? 10 HELX_P HELX_P15 15 ALA A 350 ? CYS A 365 ? ALA A 380 CYS A 395 1 ? 16 HELX_P HELX_P16 16 SER A 370 ? ARG A 378 ? SER A 400 ARG A 408 5 ? 9 HELX_P HELX_P17 17 HIS A 379 ? LYS A 389 ? HIS A 409 LYS A 419 1 ? 11 HELX_P HELX_P18 18 PRO A 392 ? LEU A 405 ? PRO A 422 LEU A 435 1 ? 14 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 353 SG ? ? ? 1_555 A CYS 387 SG ? ? A CYS 383 A CYS 417 1_555 ? ? ? ? ? ? ? 2.060 ? ? disulf2 disulf ? ? A CYS 365 SG ? ? ? 1_555 A CYS 404 SG ? ? A CYS 395 A CYS 434 1_555 ? ? ? ? ? ? ? 2.030 ? ? covale1 covale both ? A THR 121 C ? ? ? 1_555 A SNN 122 N ? ? A THR 151 A SNN 152 1_555 ? ? ? ? ? ? ? 1.415 ? ? covale2 covale none ? A SNN 122 N1 ? ? ? 1_555 A HIS 123 CA ? ? A SNN 152 A HIS 153 1_555 ? ? ? ? ? ? ? 1.443 ? ? covale3 covale one ? A ASN 142 ND2 ? ? ? 1_555 D NAG . C1 ? ? A ASN 172 A NAG 503 1_555 ? ? ? ? ? ? ? 1.421 ? N-Glycosylation covale4 covale both ? A ALA 163 C ? ? ? 1_555 A CSX 164 N ? ? A ALA 193 A CSX 194 1_555 ? ? ? ? ? ? ? 1.326 ? ? covale5 covale both ? A CSX 164 C ? ? ? 1_555 A GLU 165 N ? ? A CSX 194 A GLU 195 1_555 ? ? ? ? ? ? ? 1.336 ? ? covale6 covale one ? A ASN 238 ND2 ? ? ? 1_555 C NAG . C1 ? ? A ASN 268 A NAG 502 1_555 ? ? ? ? ? ? ? 1.436 ? N-Glycosylation covale7 covale one ? A ASN 247 ND2 ? ? ? 1_555 B NAG . C1 ? ? A ASN 277 A NAG 501 1_555 ? ? ? ? ? ? ? 1.311 ? N-Glycosylation # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 ARG 292 A . ? ARG 322 A LYS 293 A ? LYS 323 A 1 0.67 2 LYS 389 A . ? LYS 419 A PRO 390 A ? PRO 420 A 1 2.12 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA ? 6 ? AB ? 2 ? AC ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA 1 2 ? parallel AA 2 3 ? parallel AA 3 4 ? parallel AA 4 5 ? parallel AA 5 6 ? anti-parallel AB 1 2 ? anti-parallel AC 1 2 ? anti-parallel AC 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA 1 ILE A 41 ? MET A 44 ? ILE A 71 MET A 74 AA 2 HIS A 4 ? ALA A 10 ? HIS A 34 ALA A 40 AA 3 HIS A 115 ? THR A 121 ? HIS A 145 THR A 151 AA 4 LYS A 156 ? ILE A 161 ? LYS A 186 ILE A 191 AA 5 VAL A 179 ? THR A 183 ? VAL A 209 THR A 213 AA 6 MET A 243 ? GLY A 246 ? MET A 273 GLY A 276 AB 1 LEU A 128 ? VAL A 130 ? LEU A 158 VAL A 160 AB 2 ASP A 135 ? HIS A 137 ? ASP A 165 HIS A 167 AC 1 THR A 202 ? ASP A 206 ? THR A 232 ASP A 236 AC 2 TYR A 192 ? ASP A 197 ? TYR A 222 ASP A 227 AC 3 THR A 280 ? PRO A 281 ? THR A 310 PRO A 311 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA 1 2 N ILE A 42 ? N ILE A 72 O VAL A 6 ? O VAL A 36 AA 2 3 N TRP A 5 ? N TRP A 35 O HIS A 115 ? O HIS A 145 AA 3 4 N VAL A 116 ? N VAL A 146 O LYS A 156 ? O LYS A 186 AA 4 5 N PHE A 159 ? N PHE A 189 O TYR A 180 ? O TYR A 210 AA 5 6 N THR A 183 ? N THR A 213 O MET A 243 ? O MET A 273 AB 1 2 N LEU A 129 ? N LEU A 159 O LEU A 136 ? O LEU A 166 AC 1 2 N GLY A 205 ? N GLY A 235 O CYS A 194 ? O CYS A 224 AC 2 3 N ALA A 193 ? N ALA A 223 O THR A 280 ? O THR A 310 # _database_PDB_matrix.entry_id 4D3Y _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 4D3Y _atom_sites.fract_transf_matrix[1][1] 0.026130 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.016576 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.006496 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ALA 1 31 ? ? ? A . n A 1 2 GLY 2 32 32 GLY GLY A . n A 1 3 LYS 3 33 33 LYS LYS A . n A 1 4 HIS 4 34 34 HIS HIS A . n A 1 5 TRP 5 35 35 TRP TRP A . n A 1 6 VAL 6 36 36 VAL VAL A . n A 1 7 VAL 7 37 37 VAL VAL A . n A 1 8 ILE 8 38 38 ILE ILE A . n A 1 9 VAL 9 39 39 VAL VAL A . n A 1 10 ALA 10 40 40 ALA ALA A . n A 1 11 GLY 11 41 41 GLY GLY A . n A 1 12 SER 12 42 42 SER SER A . n A 1 13 ASN 13 43 43 ASN ASN A . n A 1 14 GLY 14 44 44 GLY GLY A . n A 1 15 TRP 15 45 45 TRP TRP A . n A 1 16 TYR 16 46 46 TYR TYR A . n A 1 17 ASN 17 47 47 ASN ASN A . n A 1 18 TYR 18 48 48 TYR TYR A . n A 1 19 ARG 19 49 49 ARG ARG A . n A 1 20 HIS 20 50 50 HIS HIS A . n A 1 21 GLN 21 51 51 GLN GLN A . n A 1 22 ALA 22 52 52 ALA ALA A . n A 1 23 ASP 23 53 53 ASP ASP A . n A 1 24 ALA 24 54 54 ALA ALA A . n A 1 25 CYS 25 55 55 CYS CYS A . n A 1 26 HIS 26 56 56 HIS HIS A . n A 1 27 ALA 27 57 57 ALA ALA A . n A 1 28 TYR 28 58 58 TYR TYR A . n A 1 29 GLN 29 59 59 GLN GLN A . n A 1 30 ILE 30 60 60 ILE ILE A . n A 1 31 ILE 31 61 61 ILE ILE A . n A 1 32 HIS 32 62 62 HIS HIS A . n A 1 33 ARG 33 63 63 ARG ARG A . n A 1 34 ASN 34 64 64 ASN ASN A . n A 1 35 GLY 35 65 65 GLY GLY A . n A 1 36 ILE 36 66 66 ILE ILE A . n A 1 37 PRO 37 67 67 PRO PRO A . n A 1 38 ASP 38 68 68 ASP ASP A . n A 1 39 GLU 39 69 69 GLU GLU A . n A 1 40 GLN 40 70 70 GLN GLN A . n A 1 41 ILE 41 71 71 ILE ILE A . n A 1 42 ILE 42 72 72 ILE ILE A . n A 1 43 VAL 43 73 73 VAL VAL A . n A 1 44 MET 44 74 74 MET MET A . n A 1 45 MET 45 75 75 MET MET A . n A 1 46 TYR 46 76 76 TYR TYR A . n A 1 47 ASP 47 77 77 ASP ASP A . n A 1 48 ASP 48 78 78 ASP ASP A . n A 1 49 ILE 49 79 79 ILE ILE A . n A 1 50 ALA 50 80 80 ALA ALA A . n A 1 51 ASN 51 81 81 ASN ASN A . n A 1 52 SER 52 82 82 SER SER A . n A 1 53 GLU 53 83 83 GLU GLU A . n A 1 54 ASP 54 84 84 ASP ASP A . n A 1 55 ASN 55 85 85 ASN ASN A . n A 1 56 PRO 56 86 86 PRO PRO A . n A 1 57 THR 57 87 87 THR THR A . n A 1 58 PRO 58 88 88 PRO PRO A . n A 1 59 GLY 59 89 89 GLY GLY A . n A 1 60 ILE 60 90 90 ILE ILE A . n A 1 61 VAL 61 91 91 VAL VAL A . n A 1 62 ILE 62 92 92 ILE ILE A . n A 1 63 ASN 63 93 93 ASN ASN A . n A 1 64 ARG 64 94 94 ARG ARG A . n A 1 65 PRO 65 95 95 PRO PRO A . n A 1 66 ASN 66 96 96 ASN ASN A . n A 1 67 GLY 67 97 97 GLY GLY A . n A 1 68 THR 68 98 98 THR THR A . n A 1 69 ASP 69 99 99 ASP ASP A . n A 1 70 VAL 70 100 100 VAL VAL A . n A 1 71 TYR 71 101 101 TYR TYR A . n A 1 72 ALA 72 102 102 ALA ALA A . n A 1 73 GLY 73 103 103 GLY GLY A . n A 1 74 VAL 74 104 104 VAL VAL A . n A 1 75 LEU 75 105 105 LEU LEU A . n A 1 76 LYS 76 106 106 LYS LYS A . n A 1 77 ASP 77 107 107 ASP ASP A . n A 1 78 TYR 78 108 108 TYR TYR A . n A 1 79 THR 79 109 109 THR THR A . n A 1 80 GLY 80 110 110 GLY GLY A . n A 1 81 GLU 81 111 111 GLU GLU A . n A 1 82 ASP 82 112 112 ASP ASP A . n A 1 83 VAL 83 113 113 VAL VAL A . n A 1 84 THR 84 114 114 THR THR A . n A 1 85 PRO 85 115 115 PRO PRO A . n A 1 86 GLU 86 116 116 GLU GLU A . n A 1 87 ASN 87 117 117 ASN ASN A . n A 1 88 PHE 88 118 118 PHE PHE A . n A 1 89 LEU 89 119 119 LEU LEU A . n A 1 90 ALA 90 120 120 ALA ALA A . n A 1 91 VAL 91 121 121 VAL VAL A . n A 1 92 LEU 92 122 122 LEU LEU A . n A 1 93 ARG 93 123 123 ARG ARG A . n A 1 94 GLY 94 124 124 GLY GLY A . n A 1 95 ASP 95 125 125 ASP ASP A . n A 1 96 ALA 96 126 126 ALA ALA A . n A 1 97 GLU 97 127 127 GLU GLU A . n A 1 98 ALA 98 128 128 ALA ALA A . n A 1 99 VAL 99 129 129 VAL VAL A . n A 1 100 LYS 100 130 130 LYS LYS A . n A 1 101 GLY 101 131 131 GLY GLY A . n A 1 102 LYS 102 132 132 LYS LYS A . n A 1 103 GLY 103 133 133 GLY GLY A . n A 1 104 SER 104 134 134 SER SER A . n A 1 105 GLY 105 135 135 GLY GLY A . n A 1 106 LYS 106 136 136 LYS LYS A . n A 1 107 VAL 107 137 137 VAL VAL A . n A 1 108 LEU 108 138 138 LEU LEU A . n A 1 109 ARG 109 139 139 ARG ARG A . n A 1 110 SER 110 140 140 SER SER A . n A 1 111 GLY 111 141 141 GLY GLY A . n A 1 112 PRO 112 142 142 PRO PRO A . n A 1 113 GLN 113 143 143 GLN GLN A . n A 1 114 ASP 114 144 144 ASP ASP A . n A 1 115 HIS 115 145 145 HIS HIS A . n A 1 116 VAL 116 146 146 VAL VAL A . n A 1 117 PHE 117 147 147 PHE PHE A . n A 1 118 VAL 118 148 148 VAL VAL A . n A 1 119 TYR 119 149 149 TYR TYR A . n A 1 120 PHE 120 150 150 PHE PHE A . n A 1 121 THR 121 151 151 THR THR A . n A 1 122 SNN 122 152 152 SNN SNN A . n A 1 123 HIS 123 153 153 HIS HIS A . n A 1 124 GLY 124 154 154 GLY GLY A . n A 1 125 ALA 125 155 155 ALA ALA A . n A 1 126 THR 126 156 156 THR THR A . n A 1 127 GLY 127 157 157 GLY GLY A . n A 1 128 LEU 128 158 158 LEU LEU A . n A 1 129 LEU 129 159 159 LEU LEU A . n A 1 130 VAL 130 160 160 VAL VAL A . n A 1 131 PHE 131 161 161 PHE PHE A . n A 1 132 PRO 132 162 162 PRO PRO A . n A 1 133 ASN 133 163 163 ASN ASN A . n A 1 134 GLU 134 164 164 GLU GLU A . n A 1 135 ASP 135 165 165 ASP ASP A . n A 1 136 LEU 136 166 166 LEU LEU A . n A 1 137 HIS 137 167 167 HIS HIS A . n A 1 138 VAL 138 168 168 VAL VAL A . n A 1 139 LYS 139 169 169 LYS LYS A . n A 1 140 ASP 140 170 170 ASP ASP A . n A 1 141 LEU 141 171 171 LEU LEU A . n A 1 142 ASN 142 172 172 ASN ASN A . n A 1 143 LYS 143 173 173 LYS LYS A . n A 1 144 THR 144 174 174 THR THR A . n A 1 145 ILE 145 175 175 ILE ILE A . n A 1 146 ARG 146 176 176 ARG ARG A . n A 1 147 TYR 147 177 177 TYR TYR A . n A 1 148 MET 148 178 178 MET MET A . n A 1 149 TYR 149 179 179 TYR TYR A . n A 1 150 GLU 150 180 180 GLU GLU A . n A 1 151 HIS 151 181 181 HIS HIS A . n A 1 152 LYS 152 182 182 LYS LYS A . n A 1 153 MET 153 183 183 MET MET A . n A 1 154 TYR 154 184 184 TYR TYR A . n A 1 155 GLN 155 185 185 GLN GLN A . n A 1 156 LYS 156 186 186 LYS LYS A . n A 1 157 MET 157 187 187 MET MET A . n A 1 158 VAL 158 188 188 VAL VAL A . n A 1 159 PHE 159 189 189 PHE PHE A . n A 1 160 TYR 160 190 190 TYR TYR A . n A 1 161 ILE 161 191 191 ILE ILE A . n A 1 162 GLU 162 192 192 GLU GLU A . n A 1 163 ALA 163 193 193 ALA ALA A . n A 1 164 CSX 164 194 194 CSX CSX A . n A 1 165 GLU 165 195 195 GLU GLU A . n A 1 166 SER 166 196 196 SER SER A . n A 1 167 GLY 167 197 197 GLY GLY A . n A 1 168 SER 168 198 198 SER SER A . n A 1 169 MET 169 199 199 MET MET A . n A 1 170 MET 170 200 200 MET MET A . n A 1 171 ASN 171 201 201 ASN ASN A . n A 1 172 HIS 172 202 202 HIS HIS A . n A 1 173 LEU 173 203 203 LEU LEU A . n A 1 174 PRO 174 204 204 PRO PRO A . n A 1 175 ASN 175 205 205 ASN ASN A . n A 1 176 ASP 176 206 206 ASP ASP A . n A 1 177 ILE 177 207 207 ILE ILE A . n A 1 178 ASN 178 208 208 ASN ASN A . n A 1 179 VAL 179 209 209 VAL VAL A . n A 1 180 TYR 180 210 210 TYR TYR A . n A 1 181 ALA 181 211 211 ALA ALA A . n A 1 182 THR 182 212 212 THR THR A . n A 1 183 THR 183 213 213 THR THR A . n A 1 184 ALA 184 214 214 ALA ALA A . n A 1 185 ALA 185 215 215 ALA ALA A . n A 1 186 ASN 186 216 216 ASN ASN A . n A 1 187 PRO 187 217 217 PRO PRO A . n A 1 188 HIS 188 218 218 HIS HIS A . n A 1 189 GLU 189 219 219 GLU GLU A . n A 1 190 SER 190 220 220 SER SER A . n A 1 191 SER 191 221 221 SER SER A . n A 1 192 TYR 192 222 222 TYR TYR A . n A 1 193 ALA 193 223 223 ALA ALA A . n A 1 194 CYS 194 224 224 CYS CYS A . n A 1 195 TYR 195 225 225 TYR TYR A . n A 1 196 TYR 196 226 226 TYR TYR A . n A 1 197 ASP 197 227 227 ASP ASP A . n A 1 198 GLU 198 228 228 GLU GLU A . n A 1 199 GLU 199 229 229 GLU GLU A . n A 1 200 ARG 200 230 230 ARG ARG A . n A 1 201 ASN 201 231 231 ASN ASN A . n A 1 202 THR 202 232 232 THR THR A . n A 1 203 TYR 203 233 233 TYR TYR A . n A 1 204 LEU 204 234 234 LEU LEU A . n A 1 205 GLY 205 235 235 GLY GLY A . n A 1 206 ASP 206 236 236 ASP ASP A . n A 1 207 TRP 207 237 237 TRP TRP A . n A 1 208 TYR 208 238 238 TYR TYR A . n A 1 209 SER 209 239 239 SER SER A . n A 1 210 VAL 210 240 240 VAL VAL A . n A 1 211 ASN 211 241 241 ASN ASN A . n A 1 212 TRP 212 242 242 TRP TRP A . n A 1 213 MET 213 243 243 MET MET A . n A 1 214 GLU 214 244 244 GLU GLU A . n A 1 215 ASP 215 245 245 ASP ASP A . n A 1 216 SER 216 246 246 SER SER A . n A 1 217 ASP 217 247 247 ASP ASP A . n A 1 218 VAL 218 248 248 VAL VAL A . n A 1 219 GLU 219 249 249 GLU GLU A . n A 1 220 ASP 220 250 250 ASP ASP A . n A 1 221 LEU 221 251 251 LEU LEU A . n A 1 222 THR 222 252 252 THR THR A . n A 1 223 LYS 223 253 253 LYS LYS A . n A 1 224 GLU 224 254 254 GLU GLU A . n A 1 225 THR 225 255 255 THR THR A . n A 1 226 LEU 226 256 256 LEU LEU A . n A 1 227 HIS 227 257 257 HIS HIS A . n A 1 228 LYS 228 258 258 LYS LYS A . n A 1 229 GLN 229 259 259 GLN GLN A . n A 1 230 TYR 230 260 260 TYR TYR A . n A 1 231 HIS 231 261 261 HIS HIS A . n A 1 232 LEU 232 262 262 LEU LEU A . n A 1 233 VAL 233 263 263 VAL VAL A . n A 1 234 LYS 234 264 264 LYS LYS A . n A 1 235 SER 235 265 265 SER SER A . n A 1 236 HIS 236 266 266 HIS HIS A . n A 1 237 THR 237 267 267 THR THR A . n A 1 238 ASN 238 268 268 ASN ASN A . n A 1 239 THR 239 269 269 THR THR A . n A 1 240 SER 240 270 270 SER SER A . n A 1 241 HIS 241 271 271 HIS HIS A . n A 1 242 VAL 242 272 272 VAL VAL A . n A 1 243 MET 243 273 273 MET MET A . n A 1 244 GLN 244 274 274 GLN GLN A . n A 1 245 TYR 245 275 275 TYR TYR A . n A 1 246 GLY 246 276 276 GLY GLY A . n A 1 247 ASN 247 277 277 ASN ASN A . n A 1 248 LYS 248 278 278 LYS LYS A . n A 1 249 SER 249 279 279 SER SER A . n A 1 250 ILE 250 280 280 ILE ILE A . n A 1 251 SER 251 281 281 SER SER A . n A 1 252 THR 252 282 282 THR THR A . n A 1 253 MET 253 283 283 MET MET A . n A 1 254 LYS 254 284 284 LYS LYS A . n A 1 255 VAL 255 285 285 VAL VAL A . n A 1 256 MET 256 286 286 MET MET A . n A 1 257 GLN 257 287 287 GLN GLN A . n A 1 258 PHE 258 288 288 PHE PHE A . n A 1 259 GLN 259 289 289 GLN GLN A . n A 1 260 GLY 260 290 290 GLY GLY A . n A 1 261 MET 261 291 291 MET MET A . n A 1 262 LYS 262 292 ? ? ? A . n A 1 263 HIS 263 293 ? ? ? A . n A 1 264 SER 264 294 ? ? ? A . n A 1 265 THR 265 295 ? ? ? A . n A 1 266 SER 266 296 ? ? ? A . n A 1 267 SER 267 297 297 SER SER A . n A 1 268 PRO 268 298 298 PRO PRO A . n A 1 269 ILE 269 299 299 ILE ILE A . n A 1 270 SER 270 300 300 SER SER A . n A 1 271 LEU 271 301 301 LEU LEU A . n A 1 272 PRO 272 302 302 PRO PRO A . n A 1 273 PRO 273 303 303 PRO PRO A . n A 1 274 VAL 274 304 304 VAL VAL A . n A 1 275 THR 275 305 305 THR THR A . n A 1 276 ARG 276 306 306 ARG ARG A . n A 1 277 LEU 277 307 307 LEU LEU A . n A 1 278 ASP 278 308 308 ASP ASP A . n A 1 279 LEU 279 309 309 LEU LEU A . n A 1 280 THR 280 310 310 THR THR A . n A 1 281 PRO 281 311 311 PRO PRO A . n A 1 282 SER 282 312 312 SER SER A . n A 1 283 PRO 283 313 313 PRO PRO A . n A 1 284 GLU 284 314 314 GLU GLU A . n A 1 285 VAL 285 315 315 VAL VAL A . n A 1 286 PRO 286 316 316 PRO PRO A . n A 1 287 LEU 287 317 317 LEU LEU A . n A 1 288 THR 288 318 318 THR THR A . n A 1 289 ILE 289 319 319 ILE ILE A . n A 1 290 LEU 290 320 320 LEU LEU A . n A 1 291 LYS 291 321 321 LYS LYS A . n A 1 292 ARG 292 322 322 ARG ARG A . n A 1 293 LYS 293 323 323 LYS LYS A . n A 1 294 LEU 294 324 ? ? ? A . n A 1 295 MET 295 325 ? ? ? A . n A 1 296 SER 296 326 ? ? ? A . n A 1 297 THR 297 327 ? ? ? A . n A 1 298 ASN 298 328 ? ? ? A . n A 1 299 ASP 299 329 ? ? ? A . n A 1 300 LEU 300 330 ? ? ? A . n A 1 301 LYS 301 331 ? ? ? A . n A 1 302 GLN 302 332 ? ? ? A . n A 1 303 SER 303 333 ? ? ? A . n A 1 304 GLN 304 334 ? ? ? A . n A 1 305 ASN 305 335 ? ? ? A . n A 1 306 LEU 306 336 ? ? ? A . n A 1 307 VAL 307 337 337 VAL VAL A . n A 1 308 GLY 308 338 338 GLY GLY A . n A 1 309 GLN 309 339 339 GLN GLN A . n A 1 310 ILE 310 340 340 ILE ILE A . n A 1 311 GLN 311 341 341 GLN GLN A . n A 1 312 ARG 312 342 342 ARG ARG A . n A 1 313 LEU 313 343 343 LEU LEU A . n A 1 314 LEU 314 344 344 LEU LEU A . n A 1 315 ASP 315 345 345 ASP ASP A . n A 1 316 ALA 316 346 346 ALA ALA A . n A 1 317 ARG 317 347 347 ARG ARG A . n A 1 318 HIS 318 348 348 HIS HIS A . n A 1 319 VAL 319 349 349 VAL VAL A . n A 1 320 ILE 320 350 350 ILE ILE A . n A 1 321 GLU 321 351 351 GLU GLU A . n A 1 322 LYS 322 352 352 LYS LYS A . n A 1 323 SER 323 353 353 SER SER A . n A 1 324 VAL 324 354 354 VAL VAL A . n A 1 325 HIS 325 355 355 HIS HIS A . n A 1 326 LYS 326 356 356 LYS LYS A . n A 1 327 ILE 327 357 357 ILE ILE A . n A 1 328 VAL 328 358 358 VAL VAL A . n A 1 329 SER 329 359 359 SER SER A . n A 1 330 LEU 330 360 360 LEU LEU A . n A 1 331 LEU 331 361 361 LEU LEU A . n A 1 332 ALA 332 362 362 ALA ALA A . n A 1 333 GLY 333 363 363 GLY GLY A . n A 1 334 PHE 334 364 364 PHE PHE A . n A 1 335 GLY 335 365 365 GLY GLY A . n A 1 336 GLU 336 366 366 GLU GLU A . n A 1 337 THR 337 367 367 THR THR A . n A 1 338 ALA 338 368 368 ALA ALA A . n A 1 339 GLU 339 369 369 GLU GLU A . n A 1 340 ARG 340 370 370 ARG ARG A . n A 1 341 LEU 341 371 371 LEU LEU A . n A 1 342 LEU 342 372 372 LEU LEU A . n A 1 343 SER 343 373 373 SER SER A . n A 1 344 GLU 344 374 374 GLU GLU A . n A 1 345 ARG 345 375 375 ARG ARG A . n A 1 346 ALA 346 376 376 ALA ALA A . n A 1 347 VAL 347 377 377 VAL VAL A . n A 1 348 LEU 348 378 378 LEU LEU A . n A 1 349 MET 349 379 379 MET MET A . n A 1 350 ALA 350 380 380 ALA ALA A . n A 1 351 HIS 351 381 381 HIS HIS A . n A 1 352 ASP 352 382 382 ASP ASP A . n A 1 353 CYS 353 383 383 CYS CYS A . n A 1 354 TYR 354 384 384 TYR TYR A . n A 1 355 GLN 355 385 385 GLN GLN A . n A 1 356 GLU 356 386 386 GLU GLU A . n A 1 357 ALA 357 387 387 ALA ALA A . n A 1 358 VAL 358 388 388 VAL VAL A . n A 1 359 THR 359 389 389 THR THR A . n A 1 360 HIS 360 390 390 HIS HIS A . n A 1 361 PHE 361 391 391 PHE PHE A . n A 1 362 ARG 362 392 392 ARG ARG A . n A 1 363 THR 363 393 393 THR THR A . n A 1 364 HIS 364 394 394 HIS HIS A . n A 1 365 CYS 365 395 395 CYS CYS A . n A 1 366 PHE 366 396 396 PHE PHE A . n A 1 367 ASN 367 397 397 ASN ASN A . n A 1 368 TRP 368 398 398 TRP TRP A . n A 1 369 HIS 369 399 399 HIS HIS A . n A 1 370 SER 370 400 400 SER SER A . n A 1 371 PRO 371 401 401 PRO PRO A . n A 1 372 THR 372 402 402 THR THR A . n A 1 373 TYR 373 403 403 TYR TYR A . n A 1 374 GLU 374 404 404 GLU GLU A . n A 1 375 TYR 375 405 405 TYR TYR A . n A 1 376 ALA 376 406 406 ALA ALA A . n A 1 377 LEU 377 407 407 LEU LEU A . n A 1 378 ARG 378 408 408 ARG ARG A . n A 1 379 HIS 379 409 409 HIS HIS A . n A 1 380 LEU 380 410 410 LEU LEU A . n A 1 381 TYR 381 411 411 TYR TYR A . n A 1 382 VAL 382 412 412 VAL VAL A . n A 1 383 LEU 383 413 413 LEU LEU A . n A 1 384 ALA 384 414 414 ALA ALA A . n A 1 385 ASN 385 415 415 ASN ASN A . n A 1 386 LEU 386 416 416 LEU LEU A . n A 1 387 CYS 387 417 417 CYS CYS A . n A 1 388 GLU 388 418 418 GLU GLU A . n A 1 389 LYS 389 419 419 LYS LYS A . n A 1 390 PRO 390 420 420 PRO PRO A . n A 1 391 TYR 391 421 421 TYR TYR A . n A 1 392 PRO 392 422 422 PRO PRO A . n A 1 393 ILE 393 423 423 ILE ILE A . n A 1 394 ASP 394 424 424 ASP ASP A . n A 1 395 ARG 395 425 425 ARG ARG A . n A 1 396 ILE 396 426 426 ILE ILE A . n A 1 397 LYS 397 427 427 LYS LYS A . n A 1 398 MET 398 428 428 MET MET A . n A 1 399 ALA 399 429 429 ALA ALA A . n A 1 400 MET 400 430 430 MET MET A . n A 1 401 ASP 401 431 431 ASP ASP A . n A 1 402 LYS 402 432 432 LYS LYS A . n A 1 403 VAL 403 433 433 VAL VAL A . n A 1 404 CYS 404 434 434 CYS CYS A . n A 1 405 LEU 405 435 435 LEU LEU A . n A 1 406 SER 406 436 ? ? ? A . n A 1 407 HIS 407 437 ? ? ? A . n A 1 408 TYR 408 438 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NAG 1 501 501 NAG NAG A . C 2 NAG 1 502 502 NAG NAG A . D 2 NAG 1 503 503 NAG NAG A . E 3 GOL 1 1436 1436 GOL GOL A . F 4 HOH 1 2001 2001 HOH HOH A . F 4 HOH 2 2002 2002 HOH HOH A . F 4 HOH 3 2003 2003 HOH HOH A . F 4 HOH 4 2004 2004 HOH HOH A . F 4 HOH 5 2005 2005 HOH HOH A . F 4 HOH 6 2006 2006 HOH HOH A . F 4 HOH 7 2007 2007 HOH HOH A . F 4 HOH 8 2008 2008 HOH HOH A . F 4 HOH 9 2009 2009 HOH HOH A . F 4 HOH 10 2010 2010 HOH HOH A . F 4 HOH 11 2011 2011 HOH HOH A . F 4 HOH 12 2012 2012 HOH HOH A . F 4 HOH 13 2013 2013 HOH HOH A . F 4 HOH 14 2014 2014 HOH HOH A . F 4 HOH 15 2015 2015 HOH HOH A . F 4 HOH 16 2016 2016 HOH HOH A . F 4 HOH 17 2017 2017 HOH HOH A . F 4 HOH 18 2018 2018 HOH HOH A . F 4 HOH 19 2019 2019 HOH HOH A . F 4 HOH 20 2020 2020 HOH HOH A . F 4 HOH 21 2021 2021 HOH HOH A . F 4 HOH 22 2022 2022 HOH HOH A . F 4 HOH 23 2023 2023 HOH HOH A . F 4 HOH 24 2024 2024 HOH HOH A . F 4 HOH 25 2025 2025 HOH HOH A . F 4 HOH 26 2026 2026 HOH HOH A . F 4 HOH 27 2027 2027 HOH HOH A . F 4 HOH 28 2028 2028 HOH HOH A . F 4 HOH 29 2029 2029 HOH HOH A . F 4 HOH 30 2030 2030 HOH HOH A . F 4 HOH 31 2031 2031 HOH HOH A . F 4 HOH 32 2032 2032 HOH HOH A . F 4 HOH 33 2033 2033 HOH HOH A . F 4 HOH 34 2034 2034 HOH HOH A . F 4 HOH 35 2035 2035 HOH HOH A . F 4 HOH 36 2036 2036 HOH HOH A . F 4 HOH 37 2037 2037 HOH HOH A . F 4 HOH 38 2038 2038 HOH HOH A . F 4 HOH 39 2039 2039 HOH HOH A . F 4 HOH 40 2040 2040 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A ASN 142 A ASN 172 ? ASN 'GLYCOSYLATION SITE' 2 A ASN 238 A ASN 268 ? ASN 'GLYCOSYLATION SITE' 3 A ASN 247 A ASN 277 ? ASN 'GLYCOSYLATION SITE' 4 A SNN 122 A SNN 152 ? ASN L-3-AMINOSUCCINIMIDE 5 A CSX 164 A CSX 194 ? CYS 'S-OXY CYSTEINE' # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2016-01-20 2 'Structure model' 1 1 2020-07-29 3 'Structure model' 2 0 2023-11-15 4 'Structure model' 2 1 2023-12-20 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 2 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Derived calculations' 3 2 'Structure model' Other 4 2 'Structure model' 'Structure summary' 5 3 'Structure model' 'Atomic model' 6 3 'Structure model' 'Data collection' 7 3 'Structure model' 'Database references' 8 3 'Structure model' 'Derived calculations' 9 3 'Structure model' 'Structure summary' 10 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' chem_comp 2 2 'Structure model' entity 3 2 'Structure model' pdbx_chem_comp_identifier 4 2 'Structure model' pdbx_database_status 5 2 'Structure model' pdbx_entity_nonpoly 6 2 'Structure model' struct_conn 7 2 'Structure model' struct_site 8 2 'Structure model' struct_site_gen 9 3 'Structure model' atom_site 10 3 'Structure model' atom_site_anisotrop 11 3 'Structure model' chem_comp 12 3 'Structure model' chem_comp_atom 13 3 'Structure model' chem_comp_bond 14 3 'Structure model' database_2 15 3 'Structure model' pdbx_validate_main_chain_plane 16 3 'Structure model' struct_conn 17 4 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_chem_comp.name' 2 2 'Structure model' '_chem_comp.type' 3 2 'Structure model' '_entity.pdbx_description' 4 2 'Structure model' '_pdbx_database_status.status_code_sf' 5 2 'Structure model' '_pdbx_entity_nonpoly.name' 6 2 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 7 2 'Structure model' '_struct_conn.pdbx_role' 8 3 'Structure model' '_atom_site.auth_atom_id' 9 3 'Structure model' '_atom_site.label_atom_id' 10 3 'Structure model' '_atom_site_anisotrop.pdbx_auth_atom_id' 11 3 'Structure model' '_atom_site_anisotrop.pdbx_label_atom_id' 12 3 'Structure model' '_chem_comp.pdbx_synonyms' 13 3 'Structure model' '_database_2.pdbx_DOI' 14 3 'Structure model' '_database_2.pdbx_database_accession' 15 3 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 16 3 'Structure model' '_struct_conn.ptnr2_label_atom_id' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined 51.2630 66.8756 17.5493 0.1767 0.2012 0.1927 0.0010 0.0331 0.0105 1.3299 1.1826 2.1730 -0.2128 0.0599 0.0895 -0.0309 0.0141 0.0441 -0.0935 -0.0009 -0.0081 -0.1195 0.1182 0.0237 'X-RAY DIFFRACTION' 2 ? refined 43.2394 66.8425 9.1746 0.1432 0.2888 0.2265 0.0324 -0.0342 0.0163 1.1114 6.1247 3.9422 -0.2810 -0.9243 2.5808 -0.0728 0.0441 0.0165 -0.2619 0.2331 -0.0071 -0.2879 -0.0724 -0.1845 'X-RAY DIFFRACTION' 3 ? refined 39.3978 43.2326 22.4610 0.2524 0.2975 0.2596 -0.0218 -0.0054 0.0084 1.6344 1.7345 2.1764 0.3226 -0.7962 -0.1808 -0.0913 -0.0468 -0.2163 -0.0347 0.0280 0.0448 0.2554 0.0001 0.0808 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 ? ? ? ? ? ? ? ? ? ;CHAIN 'A' AND (RESID 32 THROUGH 266 ) ; 'X-RAY DIFFRACTION' 2 2 ? ? ? ? ? ? ? ? ? ;CHAIN 'A' AND (RESID 267 THROUGH 338 ) ; 'X-RAY DIFFRACTION' 3 3 ? ? ? ? ? ? ? ? ? ;CHAIN 'A' AND (RESID 339 THROUGH 436 ) ; # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal PHENIX refinement '(PHENIX.REFINE)' ? 1 XDS 'data reduction' . ? 2 XDS 'data scaling' . ? 3 PHASER phasing . ? 4 # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 OH _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 TYR _pdbx_validate_close_contact.auth_seq_id_1 226 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 OD1 _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 ASN _pdbx_validate_close_contact.auth_seq_id_2 231 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.17 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASN A 96 ? ? 58.64 19.24 2 1 MET A 200 ? ? -140.80 -1.10 3 1 TYR A 225 ? ? 66.09 69.20 4 1 CYS A 395 ? ? -112.16 -74.05 # _pdbx_validate_main_chain_plane.id 1 _pdbx_validate_main_chain_plane.PDB_model_num 1 _pdbx_validate_main_chain_plane.auth_comp_id THR _pdbx_validate_main_chain_plane.auth_asym_id A _pdbx_validate_main_chain_plane.auth_seq_id 151 _pdbx_validate_main_chain_plane.PDB_ins_code ? _pdbx_validate_main_chain_plane.label_alt_id ? _pdbx_validate_main_chain_plane.improper_torsion_angle 17.68 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A ALA 31 ? A ALA 1 2 1 Y 1 A LYS 292 ? A LYS 262 3 1 Y 1 A HIS 293 ? A HIS 263 4 1 Y 1 A SER 294 ? A SER 264 5 1 Y 1 A THR 295 ? A THR 265 6 1 Y 1 A SER 296 ? A SER 266 7 1 Y 1 A LEU 324 ? A LEU 294 8 1 Y 1 A MET 325 ? A MET 295 9 1 Y 1 A SER 326 ? A SER 296 10 1 Y 1 A THR 327 ? A THR 297 11 1 Y 1 A ASN 328 ? A ASN 298 12 1 Y 1 A ASP 329 ? A ASP 299 13 1 Y 1 A LEU 330 ? A LEU 300 14 1 Y 1 A LYS 331 ? A LYS 301 15 1 Y 1 A GLN 332 ? A GLN 302 16 1 Y 1 A SER 333 ? A SER 303 17 1 Y 1 A GLN 334 ? A GLN 304 18 1 Y 1 A ASN 335 ? A ASN 305 19 1 Y 1 A LEU 336 ? A LEU 306 20 1 Y 1 A SER 436 ? A SER 406 21 1 Y 1 A HIS 437 ? A HIS 407 22 1 Y 1 A TYR 438 ? A TYR 408 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CSX N N N N 74 CSX CA C N R 75 CSX CB C N N 76 CSX SG S N S 77 CSX C C N N 78 CSX O O N N 79 CSX OXT O N N 80 CSX OD O N N 81 CSX H H N N 82 CSX H2 H N N 83 CSX HA H N N 84 CSX HB2 H N N 85 CSX HB3 H N N 86 CSX HG H N N 87 CSX HXT H N N 88 CYS N N N N 89 CYS CA C N R 90 CYS C C N N 91 CYS O O N N 92 CYS CB C N N 93 CYS SG S N N 94 CYS OXT O N N 95 CYS H H N N 96 CYS H2 H N N 97 CYS HA H N N 98 CYS HB2 H N N 99 CYS HB3 H N N 100 CYS HG H N N 101 CYS HXT H N N 102 GLN N N N N 103 GLN CA C N S 104 GLN C C N N 105 GLN O O N N 106 GLN CB C N N 107 GLN CG C N N 108 GLN CD C N N 109 GLN OE1 O N N 110 GLN NE2 N N N 111 GLN OXT O N N 112 GLN H H N N 113 GLN H2 H N N 114 GLN HA H N N 115 GLN HB2 H N N 116 GLN HB3 H N N 117 GLN HG2 H N N 118 GLN HG3 H N N 119 GLN HE21 H N N 120 GLN HE22 H N N 121 GLN HXT H N N 122 GLU N N N N 123 GLU CA C N S 124 GLU C C N N 125 GLU O O N N 126 GLU CB C N N 127 GLU CG C N N 128 GLU CD C N N 129 GLU OE1 O N N 130 GLU OE2 O N N 131 GLU OXT O N N 132 GLU H H N N 133 GLU H2 H N N 134 GLU HA H N N 135 GLU HB2 H N N 136 GLU HB3 H N N 137 GLU HG2 H N N 138 GLU HG3 H N N 139 GLU HE2 H N N 140 GLU HXT H N N 141 GLY N N N N 142 GLY CA C N N 143 GLY C C N N 144 GLY O O N N 145 GLY OXT O N N 146 GLY H H N N 147 GLY H2 H N N 148 GLY HA2 H N N 149 GLY HA3 H N N 150 GLY HXT H N N 151 GOL C1 C N N 152 GOL O1 O N N 153 GOL C2 C N N 154 GOL O2 O N N 155 GOL C3 C N N 156 GOL O3 O N N 157 GOL H11 H N N 158 GOL H12 H N N 159 GOL HO1 H N N 160 GOL H2 H N N 161 GOL HO2 H N N 162 GOL H31 H N N 163 GOL H32 H N N 164 GOL HO3 H N N 165 HIS N N N N 166 HIS CA C N S 167 HIS C C N N 168 HIS O O N N 169 HIS CB C N N 170 HIS CG C Y N 171 HIS ND1 N Y N 172 HIS CD2 C Y N 173 HIS CE1 C Y N 174 HIS NE2 N Y N 175 HIS OXT O N N 176 HIS H H N N 177 HIS H2 H N N 178 HIS HA H N N 179 HIS HB2 H N N 180 HIS HB3 H N N 181 HIS HD1 H N N 182 HIS HD2 H N N 183 HIS HE1 H N N 184 HIS HE2 H N N 185 HIS HXT H N N 186 HOH O O N N 187 HOH H1 H N N 188 HOH H2 H N N 189 ILE N N N N 190 ILE CA C N S 191 ILE C C N N 192 ILE O O N N 193 ILE CB C N S 194 ILE CG1 C N N 195 ILE CG2 C N N 196 ILE CD1 C N N 197 ILE OXT O N N 198 ILE H H N N 199 ILE H2 H N N 200 ILE HA H N N 201 ILE HB H N N 202 ILE HG12 H N N 203 ILE HG13 H N N 204 ILE HG21 H N N 205 ILE HG22 H N N 206 ILE HG23 H N N 207 ILE HD11 H N N 208 ILE HD12 H N N 209 ILE HD13 H N N 210 ILE HXT H N N 211 LEU N N N N 212 LEU CA C N S 213 LEU C C N N 214 LEU O O N N 215 LEU CB C N N 216 LEU CG C N N 217 LEU CD1 C N N 218 LEU CD2 C N N 219 LEU OXT O N N 220 LEU H H N N 221 LEU H2 H N N 222 LEU HA H N N 223 LEU HB2 H N N 224 LEU HB3 H N N 225 LEU HG H N N 226 LEU HD11 H N N 227 LEU HD12 H N N 228 LEU HD13 H N N 229 LEU HD21 H N N 230 LEU HD22 H N N 231 LEU HD23 H N N 232 LEU HXT H N N 233 LYS N N N N 234 LYS CA C N S 235 LYS C C N N 236 LYS O O N N 237 LYS CB C N N 238 LYS CG C N N 239 LYS CD C N N 240 LYS CE C N N 241 LYS NZ N N N 242 LYS OXT O N N 243 LYS H H N N 244 LYS H2 H N N 245 LYS HA H N N 246 LYS HB2 H N N 247 LYS HB3 H N N 248 LYS HG2 H N N 249 LYS HG3 H N N 250 LYS HD2 H N N 251 LYS HD3 H N N 252 LYS HE2 H N N 253 LYS HE3 H N N 254 LYS HZ1 H N N 255 LYS HZ2 H N N 256 LYS HZ3 H N N 257 LYS HXT H N N 258 MET N N N N 259 MET CA C N S 260 MET C C N N 261 MET O O N N 262 MET CB C N N 263 MET CG C N N 264 MET SD S N N 265 MET CE C N N 266 MET OXT O N N 267 MET H H N N 268 MET H2 H N N 269 MET HA H N N 270 MET HB2 H N N 271 MET HB3 H N N 272 MET HG2 H N N 273 MET HG3 H N N 274 MET HE1 H N N 275 MET HE2 H N N 276 MET HE3 H N N 277 MET HXT H N N 278 NAG C1 C N R 279 NAG C2 C N R 280 NAG C3 C N R 281 NAG C4 C N S 282 NAG C5 C N R 283 NAG C6 C N N 284 NAG C7 C N N 285 NAG C8 C N N 286 NAG N2 N N N 287 NAG O1 O N N 288 NAG O3 O N N 289 NAG O4 O N N 290 NAG O5 O N N 291 NAG O6 O N N 292 NAG O7 O N N 293 NAG H1 H N N 294 NAG H2 H N N 295 NAG H3 H N N 296 NAG H4 H N N 297 NAG H5 H N N 298 NAG H61 H N N 299 NAG H62 H N N 300 NAG H81 H N N 301 NAG H82 H N N 302 NAG H83 H N N 303 NAG HN2 H N N 304 NAG HO1 H N N 305 NAG HO3 H N N 306 NAG HO4 H N N 307 NAG HO6 H N N 308 PHE N N N N 309 PHE CA C N S 310 PHE C C N N 311 PHE O O N N 312 PHE CB C N N 313 PHE CG C Y N 314 PHE CD1 C Y N 315 PHE CD2 C Y N 316 PHE CE1 C Y N 317 PHE CE2 C Y N 318 PHE CZ C Y N 319 PHE OXT O N N 320 PHE H H N N 321 PHE H2 H N N 322 PHE HA H N N 323 PHE HB2 H N N 324 PHE HB3 H N N 325 PHE HD1 H N N 326 PHE HD2 H N N 327 PHE HE1 H N N 328 PHE HE2 H N N 329 PHE HZ H N N 330 PHE HXT H N N 331 PRO N N N N 332 PRO CA C N S 333 PRO C C N N 334 PRO O O N N 335 PRO CB C N N 336 PRO CG C N N 337 PRO CD C N N 338 PRO OXT O N N 339 PRO H H N N 340 PRO HA H N N 341 PRO HB2 H N N 342 PRO HB3 H N N 343 PRO HG2 H N N 344 PRO HG3 H N N 345 PRO HD2 H N N 346 PRO HD3 H N N 347 PRO HXT H N N 348 SER N N N N 349 SER CA C N S 350 SER C C N N 351 SER O O N N 352 SER CB C N N 353 SER OG O N N 354 SER OXT O N N 355 SER H H N N 356 SER H2 H N N 357 SER HA H N N 358 SER HB2 H N N 359 SER HB3 H N N 360 SER HG H N N 361 SER HXT H N N 362 SNN N1 N N N 363 SNN C C N N 364 SNN CA C N S 365 SNN N N N N 366 SNN C4 C N N 367 SNN C5 C N N 368 SNN O O N N 369 SNN O5 O N N 370 SNN HN H N N 371 SNN HA H N N 372 SNN H H N N 373 SNN H2 H N N 374 SNN H41 H N N 375 SNN H42 H N N 376 THR N N N N 377 THR CA C N S 378 THR C C N N 379 THR O O N N 380 THR CB C N R 381 THR OG1 O N N 382 THR CG2 C N N 383 THR OXT O N N 384 THR H H N N 385 THR H2 H N N 386 THR HA H N N 387 THR HB H N N 388 THR HG1 H N N 389 THR HG21 H N N 390 THR HG22 H N N 391 THR HG23 H N N 392 THR HXT H N N 393 TRP N N N N 394 TRP CA C N S 395 TRP C C N N 396 TRP O O N N 397 TRP CB C N N 398 TRP CG C Y N 399 TRP CD1 C Y N 400 TRP CD2 C Y N 401 TRP NE1 N Y N 402 TRP CE2 C Y N 403 TRP CE3 C Y N 404 TRP CZ2 C Y N 405 TRP CZ3 C Y N 406 TRP CH2 C Y N 407 TRP OXT O N N 408 TRP H H N N 409 TRP H2 H N N 410 TRP HA H N N 411 TRP HB2 H N N 412 TRP HB3 H N N 413 TRP HD1 H N N 414 TRP HE1 H N N 415 TRP HE3 H N N 416 TRP HZ2 H N N 417 TRP HZ3 H N N 418 TRP HH2 H N N 419 TRP HXT H N N 420 TYR N N N N 421 TYR CA C N S 422 TYR C C N N 423 TYR O O N N 424 TYR CB C N N 425 TYR CG C Y N 426 TYR CD1 C Y N 427 TYR CD2 C Y N 428 TYR CE1 C Y N 429 TYR CE2 C Y N 430 TYR CZ C Y N 431 TYR OH O N N 432 TYR OXT O N N 433 TYR H H N N 434 TYR H2 H N N 435 TYR HA H N N 436 TYR HB2 H N N 437 TYR HB3 H N N 438 TYR HD1 H N N 439 TYR HD2 H N N 440 TYR HE1 H N N 441 TYR HE2 H N N 442 TYR HH H N N 443 TYR HXT H N N 444 VAL N N N N 445 VAL CA C N S 446 VAL C C N N 447 VAL O O N N 448 VAL CB C N N 449 VAL CG1 C N N 450 VAL CG2 C N N 451 VAL OXT O N N 452 VAL H H N N 453 VAL H2 H N N 454 VAL HA H N N 455 VAL HB H N N 456 VAL HG11 H N N 457 VAL HG12 H N N 458 VAL HG13 H N N 459 VAL HG21 H N N 460 VAL HG22 H N N 461 VAL HG23 H N N 462 VAL HXT H N N 463 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CSX N CA sing N N 70 CSX N H sing N N 71 CSX N H2 sing N N 72 CSX CA CB sing N N 73 CSX CA C sing N N 74 CSX CA HA sing N N 75 CSX CB SG sing N N 76 CSX CB HB2 sing N N 77 CSX CB HB3 sing N N 78 CSX SG OD doub N N 79 CSX SG HG sing N N 80 CSX C O doub N N 81 CSX C OXT sing N N 82 CSX OXT HXT sing N N 83 CYS N CA sing N N 84 CYS N H sing N N 85 CYS N H2 sing N N 86 CYS CA C sing N N 87 CYS CA CB sing N N 88 CYS CA HA sing N N 89 CYS C O doub N N 90 CYS C OXT sing N N 91 CYS CB SG sing N N 92 CYS CB HB2 sing N N 93 CYS CB HB3 sing N N 94 CYS SG HG sing N N 95 CYS OXT HXT sing N N 96 GLN N CA sing N N 97 GLN N H sing N N 98 GLN N H2 sing N N 99 GLN CA C sing N N 100 GLN CA CB sing N N 101 GLN CA HA sing N N 102 GLN C O doub N N 103 GLN C OXT sing N N 104 GLN CB CG sing N N 105 GLN CB HB2 sing N N 106 GLN CB HB3 sing N N 107 GLN CG CD sing N N 108 GLN CG HG2 sing N N 109 GLN CG HG3 sing N N 110 GLN CD OE1 doub N N 111 GLN CD NE2 sing N N 112 GLN NE2 HE21 sing N N 113 GLN NE2 HE22 sing N N 114 GLN OXT HXT sing N N 115 GLU N CA sing N N 116 GLU N H sing N N 117 GLU N H2 sing N N 118 GLU CA C sing N N 119 GLU CA CB sing N N 120 GLU CA HA sing N N 121 GLU C O doub N N 122 GLU C OXT sing N N 123 GLU CB CG sing N N 124 GLU CB HB2 sing N N 125 GLU CB HB3 sing N N 126 GLU CG CD sing N N 127 GLU CG HG2 sing N N 128 GLU CG HG3 sing N N 129 GLU CD OE1 doub N N 130 GLU CD OE2 sing N N 131 GLU OE2 HE2 sing N N 132 GLU OXT HXT sing N N 133 GLY N CA sing N N 134 GLY N H sing N N 135 GLY N H2 sing N N 136 GLY CA C sing N N 137 GLY CA HA2 sing N N 138 GLY CA HA3 sing N N 139 GLY C O doub N N 140 GLY C OXT sing N N 141 GLY OXT HXT sing N N 142 GOL C1 O1 sing N N 143 GOL C1 C2 sing N N 144 GOL C1 H11 sing N N 145 GOL C1 H12 sing N N 146 GOL O1 HO1 sing N N 147 GOL C2 O2 sing N N 148 GOL C2 C3 sing N N 149 GOL C2 H2 sing N N 150 GOL O2 HO2 sing N N 151 GOL C3 O3 sing N N 152 GOL C3 H31 sing N N 153 GOL C3 H32 sing N N 154 GOL O3 HO3 sing N N 155 HIS N CA sing N N 156 HIS N H sing N N 157 HIS N H2 sing N N 158 HIS CA C sing N N 159 HIS CA CB sing N N 160 HIS CA HA sing N N 161 HIS C O doub N N 162 HIS C OXT sing N N 163 HIS CB CG sing N N 164 HIS CB HB2 sing N N 165 HIS CB HB3 sing N N 166 HIS CG ND1 sing Y N 167 HIS CG CD2 doub Y N 168 HIS ND1 CE1 doub Y N 169 HIS ND1 HD1 sing N N 170 HIS CD2 NE2 sing Y N 171 HIS CD2 HD2 sing N N 172 HIS CE1 NE2 sing Y N 173 HIS CE1 HE1 sing N N 174 HIS NE2 HE2 sing N N 175 HIS OXT HXT sing N N 176 HOH O H1 sing N N 177 HOH O H2 sing N N 178 ILE N CA sing N N 179 ILE N H sing N N 180 ILE N H2 sing N N 181 ILE CA C sing N N 182 ILE CA CB sing N N 183 ILE CA HA sing N N 184 ILE C O doub N N 185 ILE C OXT sing N N 186 ILE CB CG1 sing N N 187 ILE CB CG2 sing N N 188 ILE CB HB sing N N 189 ILE CG1 CD1 sing N N 190 ILE CG1 HG12 sing N N 191 ILE CG1 HG13 sing N N 192 ILE CG2 HG21 sing N N 193 ILE CG2 HG22 sing N N 194 ILE CG2 HG23 sing N N 195 ILE CD1 HD11 sing N N 196 ILE CD1 HD12 sing N N 197 ILE CD1 HD13 sing N N 198 ILE OXT HXT sing N N 199 LEU N CA sing N N 200 LEU N H sing N N 201 LEU N H2 sing N N 202 LEU CA C sing N N 203 LEU CA CB sing N N 204 LEU CA HA sing N N 205 LEU C O doub N N 206 LEU C OXT sing N N 207 LEU CB CG sing N N 208 LEU CB HB2 sing N N 209 LEU CB HB3 sing N N 210 LEU CG CD1 sing N N 211 LEU CG CD2 sing N N 212 LEU CG HG sing N N 213 LEU CD1 HD11 sing N N 214 LEU CD1 HD12 sing N N 215 LEU CD1 HD13 sing N N 216 LEU CD2 HD21 sing N N 217 LEU CD2 HD22 sing N N 218 LEU CD2 HD23 sing N N 219 LEU OXT HXT sing N N 220 LYS N CA sing N N 221 LYS N H sing N N 222 LYS N H2 sing N N 223 LYS CA C sing N N 224 LYS CA CB sing N N 225 LYS CA HA sing N N 226 LYS C O doub N N 227 LYS C OXT sing N N 228 LYS CB CG sing N N 229 LYS CB HB2 sing N N 230 LYS CB HB3 sing N N 231 LYS CG CD sing N N 232 LYS CG HG2 sing N N 233 LYS CG HG3 sing N N 234 LYS CD CE sing N N 235 LYS CD HD2 sing N N 236 LYS CD HD3 sing N N 237 LYS CE NZ sing N N 238 LYS CE HE2 sing N N 239 LYS CE HE3 sing N N 240 LYS NZ HZ1 sing N N 241 LYS NZ HZ2 sing N N 242 LYS NZ HZ3 sing N N 243 LYS OXT HXT sing N N 244 MET N CA sing N N 245 MET N H sing N N 246 MET N H2 sing N N 247 MET CA C sing N N 248 MET CA CB sing N N 249 MET CA HA sing N N 250 MET C O doub N N 251 MET C OXT sing N N 252 MET CB CG sing N N 253 MET CB HB2 sing N N 254 MET CB HB3 sing N N 255 MET CG SD sing N N 256 MET CG HG2 sing N N 257 MET CG HG3 sing N N 258 MET SD CE sing N N 259 MET CE HE1 sing N N 260 MET CE HE2 sing N N 261 MET CE HE3 sing N N 262 MET OXT HXT sing N N 263 NAG C1 C2 sing N N 264 NAG C1 O1 sing N N 265 NAG C1 O5 sing N N 266 NAG C1 H1 sing N N 267 NAG C2 C3 sing N N 268 NAG C2 N2 sing N N 269 NAG C2 H2 sing N N 270 NAG C3 C4 sing N N 271 NAG C3 O3 sing N N 272 NAG C3 H3 sing N N 273 NAG C4 C5 sing N N 274 NAG C4 O4 sing N N 275 NAG C4 H4 sing N N 276 NAG C5 C6 sing N N 277 NAG C5 O5 sing N N 278 NAG C5 H5 sing N N 279 NAG C6 O6 sing N N 280 NAG C6 H61 sing N N 281 NAG C6 H62 sing N N 282 NAG C7 C8 sing N N 283 NAG C7 N2 sing N N 284 NAG C7 O7 doub N N 285 NAG C8 H81 sing N N 286 NAG C8 H82 sing N N 287 NAG C8 H83 sing N N 288 NAG N2 HN2 sing N N 289 NAG O1 HO1 sing N N 290 NAG O3 HO3 sing N N 291 NAG O4 HO4 sing N N 292 NAG O6 HO6 sing N N 293 PHE N CA sing N N 294 PHE N H sing N N 295 PHE N H2 sing N N 296 PHE CA C sing N N 297 PHE CA CB sing N N 298 PHE CA HA sing N N 299 PHE C O doub N N 300 PHE C OXT sing N N 301 PHE CB CG sing N N 302 PHE CB HB2 sing N N 303 PHE CB HB3 sing N N 304 PHE CG CD1 doub Y N 305 PHE CG CD2 sing Y N 306 PHE CD1 CE1 sing Y N 307 PHE CD1 HD1 sing N N 308 PHE CD2 CE2 doub Y N 309 PHE CD2 HD2 sing N N 310 PHE CE1 CZ doub Y N 311 PHE CE1 HE1 sing N N 312 PHE CE2 CZ sing Y N 313 PHE CE2 HE2 sing N N 314 PHE CZ HZ sing N N 315 PHE OXT HXT sing N N 316 PRO N CA sing N N 317 PRO N CD sing N N 318 PRO N H sing N N 319 PRO CA C sing N N 320 PRO CA CB sing N N 321 PRO CA HA sing N N 322 PRO C O doub N N 323 PRO C OXT sing N N 324 PRO CB CG sing N N 325 PRO CB HB2 sing N N 326 PRO CB HB3 sing N N 327 PRO CG CD sing N N 328 PRO CG HG2 sing N N 329 PRO CG HG3 sing N N 330 PRO CD HD2 sing N N 331 PRO CD HD3 sing N N 332 PRO OXT HXT sing N N 333 SER N CA sing N N 334 SER N H sing N N 335 SER N H2 sing N N 336 SER CA C sing N N 337 SER CA CB sing N N 338 SER CA HA sing N N 339 SER C O doub N N 340 SER C OXT sing N N 341 SER CB OG sing N N 342 SER CB HB2 sing N N 343 SER CB HB3 sing N N 344 SER OG HG sing N N 345 SER OXT HXT sing N N 346 SNN N1 C sing N N 347 SNN N1 C5 sing N N 348 SNN N1 HN sing N N 349 SNN C CA sing N N 350 SNN C O doub N N 351 SNN CA N sing N N 352 SNN CA C4 sing N N 353 SNN CA HA sing N N 354 SNN N H sing N N 355 SNN N H2 sing N N 356 SNN C4 C5 sing N N 357 SNN C4 H41 sing N N 358 SNN C4 H42 sing N N 359 SNN C5 O5 doub N N 360 THR N CA sing N N 361 THR N H sing N N 362 THR N H2 sing N N 363 THR CA C sing N N 364 THR CA CB sing N N 365 THR CA HA sing N N 366 THR C O doub N N 367 THR C OXT sing N N 368 THR CB OG1 sing N N 369 THR CB CG2 sing N N 370 THR CB HB sing N N 371 THR OG1 HG1 sing N N 372 THR CG2 HG21 sing N N 373 THR CG2 HG22 sing N N 374 THR CG2 HG23 sing N N 375 THR OXT HXT sing N N 376 TRP N CA sing N N 377 TRP N H sing N N 378 TRP N H2 sing N N 379 TRP CA C sing N N 380 TRP CA CB sing N N 381 TRP CA HA sing N N 382 TRP C O doub N N 383 TRP C OXT sing N N 384 TRP CB CG sing N N 385 TRP CB HB2 sing N N 386 TRP CB HB3 sing N N 387 TRP CG CD1 doub Y N 388 TRP CG CD2 sing Y N 389 TRP CD1 NE1 sing Y N 390 TRP CD1 HD1 sing N N 391 TRP CD2 CE2 doub Y N 392 TRP CD2 CE3 sing Y N 393 TRP NE1 CE2 sing Y N 394 TRP NE1 HE1 sing N N 395 TRP CE2 CZ2 sing Y N 396 TRP CE3 CZ3 doub Y N 397 TRP CE3 HE3 sing N N 398 TRP CZ2 CH2 doub Y N 399 TRP CZ2 HZ2 sing N N 400 TRP CZ3 CH2 sing Y N 401 TRP CZ3 HZ3 sing N N 402 TRP CH2 HH2 sing N N 403 TRP OXT HXT sing N N 404 TYR N CA sing N N 405 TYR N H sing N N 406 TYR N H2 sing N N 407 TYR CA C sing N N 408 TYR CA CB sing N N 409 TYR CA HA sing N N 410 TYR C O doub N N 411 TYR C OXT sing N N 412 TYR CB CG sing N N 413 TYR CB HB2 sing N N 414 TYR CB HB3 sing N N 415 TYR CG CD1 doub Y N 416 TYR CG CD2 sing Y N 417 TYR CD1 CE1 sing Y N 418 TYR CD1 HD1 sing N N 419 TYR CD2 CE2 doub Y N 420 TYR CD2 HD2 sing N N 421 TYR CE1 CZ doub Y N 422 TYR CE1 HE1 sing N N 423 TYR CE2 CZ sing Y N 424 TYR CE2 HE2 sing N N 425 TYR CZ OH sing N N 426 TYR OH HH sing N N 427 TYR OXT HXT sing N N 428 VAL N CA sing N N 429 VAL N H sing N N 430 VAL N H2 sing N N 431 VAL CA C sing N N 432 VAL CA CB sing N N 433 VAL CA HA sing N N 434 VAL C O doub N N 435 VAL C OXT sing N N 436 VAL CB CG1 sing N N 437 VAL CB CG2 sing N N 438 VAL CB HB sing N N 439 VAL CG1 HG11 sing N N 440 VAL CG1 HG12 sing N N 441 VAL CG1 HG13 sing N N 442 VAL CG2 HG21 sing N N 443 VAL CG2 HG22 sing N N 444 VAL CG2 HG23 sing N N 445 VAL OXT HXT sing N N 446 # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier NAG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAcb NAG 'COMMON NAME' GMML 1.0 N-acetyl-b-D-glucopyranosamine NAG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GlcpNAc NAG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 2-acetamido-2-deoxy-beta-D-glucopyranose NAG 3 GLYCEROL GOL 4 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 4FGU _pdbx_initial_refinement_model.details 'PDB ENTRY 4FGU' #