HEADER DE NOVO PROTEIN 28-OCT-14 4D4E TITLE CRYSTAL STRUCTURE OF COMPUTATIONALLY DESIGNED ARMADILLO TITLE 2 REPEAT PROTEINS FOR MODULAR PEPTIDE RECOGNITION. COMPND MOL_ID: 1; COMPND 2 MOLECULE: ARMADILLO REPEAT PROTEIN ARM00016; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES; COMPND 5 OTHER_DETAILS: COMPUTATIONALLY DESIGNED ARMADILLO REPEAT PROTEIN SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 3 ORGANISM_TAXID: 32630; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: XL1-BLUE; SOURCE 7 EXPRESSION_SYSTEM_VECTOR: PQE; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: YIII_(DQ)4_C(PAF); SOURCE 9 OTHER_DETAILS: DE NOVO DESIGNED PROTEIN KEYWDS DE NOVO PROTEIN, ARMADILLO REPEAT PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR C.REICHEN,C.FORZANI,T.ZHOU,F.PARMEGGIANI,S.J.FLEISHMAN,P.R.E.MITTL, AUTHOR 2 C.MADHURANTAKAM,A.HONEGGER,C.EWALD,O.ZERBE,D.BAKER,A.CAFLISCH, AUTHOR 3 A.PLUCKTHUN REVDAT 3 09-NOV-16 4D4E 1 JRNL REVDAT 2 05-OCT-16 4D4E 1 JRNL REVDAT 1 13-JAN-16 4D4E 0 JRNL AUTH C.REICHEN,C.FORZANI,T.ZHOU,F.PARMEGGIANI,S.J.FLEISHMAN, JRNL AUTH 2 P.R.E.MITTL,C.MADHURANTAKAM,A.HONEGGER,C.EWALD,O.ZERBE, JRNL AUTH 3 D.BAKER,A.CAFLISCH,A.PLUCKTHUN JRNL TITL COMPUTATIONALLY DESIGNED ARMADILLO REPEAT PROTEINS FOR JRNL TITL 2 MODULAR PEPTIDE RECOGNITION. JRNL REF J.MOL.BIOL. V. 428 4467 2016 JRNL REFN ISSN 0022-2836 JRNL PMID 27664438 JRNL DOI 10.1016/J.JMB.2016.09.012 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.7.0029 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 39.35 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 88.11 REMARK 3 NUMBER OF REFLECTIONS : 26231 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.19119 REMARK 3 R VALUE (WORKING SET) : 0.18754 REMARK 3 FREE R VALUE : 0.26342 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.0 REMARK 3 FREE R VALUE TEST SET COUNT : 1384 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.000 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.052 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1537 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 72.04 REMARK 3 BIN R VALUE (WORKING SET) : 0.260 REMARK 3 BIN FREE R VALUE SET COUNT : 89 REMARK 3 BIN FREE R VALUE : 0.318 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3490 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 18 REMARK 3 SOLVENT ATOMS : 250 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 39.932 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.86 REMARK 3 B22 (A**2) : -1.16 REMARK 3 B33 (A**2) : -0.71 REMARK 3 B12 (A**2) : 0.00 REMARK 3 B13 (A**2) : 0.00 REMARK 3 B23 (A**2) : 0.00 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.233 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.213 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.148 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 10.588 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.961 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.921 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3562 ; 0.016 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4832 ; 1.875 ; 1.991 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 488 ; 6.347 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 157 ;46.539 ;29.490 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 664 ;18.967 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 2 ; 4.956 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 596 ; 0.129 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2628 ; 0.009 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 12 A 249 REMARK 3 ORIGIN FOR THE GROUP (A): 7.3227 -19.3017 -18.6557 REMARK 3 T TENSOR REMARK 3 T11: 0.0666 T22: 0.0185 REMARK 3 T33: 0.0418 T12: 0.0025 REMARK 3 T13: -0.0292 T23: 0.0040 REMARK 3 L TENSOR REMARK 3 L11: 0.4078 L22: 1.5732 REMARK 3 L33: 0.3132 L12: 0.4720 REMARK 3 L13: 0.1756 L23: -0.2333 REMARK 3 S TENSOR REMARK 3 S11: -0.0520 S12: 0.0222 S13: -0.0607 REMARK 3 S21: 0.0938 S22: 0.1191 S23: -0.0742 REMARK 3 S31: -0.0413 S32: -0.0469 S33: -0.0671 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 12 B 249 REMARK 3 ORIGIN FOR THE GROUP (A): 19.5604 -38.3250 0.7028 REMARK 3 T TENSOR REMARK 3 T11: 0.0706 T22: 0.0085 REMARK 3 T33: 0.0617 T12: -0.0087 REMARK 3 T13: 0.0131 T23: -0.0153 REMARK 3 L TENSOR REMARK 3 L11: 0.4970 L22: 0.7846 REMARK 3 L33: 1.4434 L12: 0.4568 REMARK 3 L13: -0.5788 L23: -0.3737 REMARK 3 S TENSOR REMARK 3 S11: -0.0728 S12: 0.0316 S13: -0.1251 REMARK 3 S21: 0.0411 S22: 0.0462 S23: -0.1896 REMARK 3 S31: -0.0264 S32: 0.0223 S33: 0.0265 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. REMARK 4 REMARK 4 4D4E COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 28-OCT-14. REMARK 100 THE PDBE ID CODE IS EBI-62158. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-AUG-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06DA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.000000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 2M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 27662 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.00 REMARK 200 RESOLUTION RANGE LOW (A) : 40.12 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.3 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 88.2 REMARK 200 DATA REDUNDANCY : 5.0 REMARK 200 R MERGE (I) : 0.09 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.30 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.11 REMARK 200 COMPLETENESS FOR SHELL (%) : 72.3 REMARK 200 DATA REDUNDANCY IN SHELL : 5.0 REMARK 200 R MERGE FOR SHELL (I) : 0.59 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.30 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: ARM00009 REMARK 200 REMARK 200 REMARK: DESIGNED ARMADILLO REPEAT PROTEIN ARM00009 WAS REMARK 200 SOLVED BY USING AN POLY-ALA-MODEL, THAT WAS CREATED FROM REMARK 200 THE CRYSTAL STRUCTURE OF AN N4C CONSENSUS-BASED ARMRP PDB REMARK 200 ID 4V3Q. DATA WERE COLLECTED BY ROTATION METHOD. REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.59 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.14 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PH 5.5 0.3 M NA-ACETATE/ 0.1 M NA- REMARK 280 ACETATE/ 25 % PEG 2K MME REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 25.90500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 63.42000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 34.33500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 63.42000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 25.90500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 34.33500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 0 REMARK 465 ARG A 1 REMARK 465 GLY A 2 REMARK 465 SER A 3 REMARK 465 HIS A 4 REMARK 465 HIS A 5 REMARK 465 HIS A 6 REMARK 465 HIS A 7 REMARK 465 HIS A 8 REMARK 465 HIS A 9 REMARK 465 GLY A 10 REMARK 465 SER A 11 REMARK 465 MET B 0 REMARK 465 ARG B 1 REMARK 465 GLY B 2 REMARK 465 SER B 3 REMARK 465 HIS B 4 REMARK 465 HIS B 5 REMARK 465 HIS B 6 REMARK 465 HIS B 7 REMARK 465 HIS B 8 REMARK 465 HIS B 9 REMARK 465 GLY B 10 REMARK 465 SER B 11 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 SER A 250 CA C O CB OG REMARK 470 SER B 250 CA C O CB OG REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 2048 O HOH A 2101 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 149 -23.26 -34.74 REMARK 500 ASN A 210 -169.31 -75.99 REMARK 500 ASP B 105 39.92 35.83 REMARK 500 LEU B 146 -1.22 -58.70 REMARK 500 ASP B 148 5.29 -151.19 REMARK 500 ALA B 178 2.11 -69.59 REMARK 500 ASN B 210 -168.81 -175.68 REMARK 500 ALA B 233 0.98 -65.31 REMARK 500 ALA B 247 -3.76 -55.88 REMARK 500 PHE B 248 -76.92 -92.86 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CHIRAL CENTERS REMARK 500 REMARK 500 UNEXPECTED CONFIGURATION OF THE FOLLOWING CHIRAL REMARK 500 CENTER(S) USING IMPROPER CA--C--CB--N CHIRALITY REMARK 500 FOR AMINO ACIDS AND C1'--O4'--N1(N9)--C2' FOR REMARK 500 NUCLEIC ACIDS OR EQUIVALENT ANGLE REMARK 500 M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,6X,F5.1,6X,A1,10X,A1,3X,A16) REMARK 500 REMARK 500 M RES CSSEQI IMPROPER EXPECTED FOUND DETAILS REMARK 500 ASN A 249 24.6 L L OUTSIDE RANGE REMARK 500 ASP B 105 21.4 L L OUTSIDE RANGE REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A2003 DISTANCE = 5.71 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A1250 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B1250 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B1251 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4D49 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF COMPUTATIONALLY DESIGNED ARMADILLO REMARK 900 REPEAT PROTEINS FOR MODULAR PEPTIDE RECOGNITION. DBREF 4D4E A 0 250 PDB 4D4E 4D4E 0 250 DBREF 4D4E B 0 250 PDB 4D4E 4D4E 0 250 SEQRES 1 A 251 MET ARG GLY SER HIS HIS HIS HIS HIS HIS GLY SER GLU SEQRES 2 A 251 LEU PRO GLN MET VAL GLN GLN LEU ASN SER PRO ASP GLN SEQRES 3 A 251 GLN GLU LEU GLN SER ALA LEU ARG LYS LEU SER GLN ILE SEQRES 4 A 251 ALA SER GLY GLY ASN GLU GLN ILE GLN LYS LEU ILE GLU SEQRES 5 A 251 ALA GLY ALA LEU SER PRO LEU VAL LYS LEU LEU ASP ASP SEQRES 6 A 251 ALA SER GLU GLU VAL ILE LYS ASN ALA VAL ALA ALA ILE SEQRES 7 A 251 ALA ASN ILE ALA ALA GLY ASN ASN GLU GLN ILE GLN LYS SEQRES 8 A 251 LEU ILE GLU ALA GLY ALA LEU SER PRO LEU VAL LYS LEU SEQRES 9 A 251 LEU ASP ASP ALA SER GLU GLU VAL ILE LYS ASN ALA VAL SEQRES 10 A 251 ALA ALA ILE ALA ASN ILE ALA ALA GLY ASN ASN GLU GLN SEQRES 11 A 251 ILE GLN LYS LEU ILE GLU ALA GLY ALA LEU SER PRO LEU SEQRES 12 A 251 VAL LYS LEU LEU ASP ASP ALA SER GLU GLU VAL ILE LYS SEQRES 13 A 251 ASN ALA VAL ALA ALA ILE ALA ASN ILE ALA ALA GLY ASN SEQRES 14 A 251 ASN GLU GLN ILE GLN LYS LEU ILE GLU ALA GLY ALA LEU SEQRES 15 A 251 SER PRO LEU VAL LYS LEU LEU ASP ASP ALA SER GLU GLU SEQRES 16 A 251 VAL ILE LYS ASN ALA VAL ALA ALA ILE ALA ASN ILE ALA SEQRES 17 A 251 ALA GLY ASN ASN GLU MET LYS GLN LYS LEU GLU GLU ALA SEQRES 18 A 251 GLY ALA LEU PRO ALA LEU GLU LYS LEU GLN SER HIS ALA SEQRES 19 A 251 ASN GLU GLU VAL GLN LYS ASN ALA GLN ALA ALA LEU GLU SEQRES 20 A 251 ALA PHE ASN SER SEQRES 1 B 251 MET ARG GLY SER HIS HIS HIS HIS HIS HIS GLY SER GLU SEQRES 2 B 251 LEU PRO GLN MET VAL GLN GLN LEU ASN SER PRO ASP GLN SEQRES 3 B 251 GLN GLU LEU GLN SER ALA LEU ARG LYS LEU SER GLN ILE SEQRES 4 B 251 ALA SER GLY GLY ASN GLU GLN ILE GLN LYS LEU ILE GLU SEQRES 5 B 251 ALA GLY ALA LEU SER PRO LEU VAL LYS LEU LEU ASP ASP SEQRES 6 B 251 ALA SER GLU GLU VAL ILE LYS ASN ALA VAL ALA ALA ILE SEQRES 7 B 251 ALA ASN ILE ALA ALA GLY ASN ASN GLU GLN ILE GLN LYS SEQRES 8 B 251 LEU ILE GLU ALA GLY ALA LEU SER PRO LEU VAL LYS LEU SEQRES 9 B 251 LEU ASP ASP ALA SER GLU GLU VAL ILE LYS ASN ALA VAL SEQRES 10 B 251 ALA ALA ILE ALA ASN ILE ALA ALA GLY ASN ASN GLU GLN SEQRES 11 B 251 ILE GLN LYS LEU ILE GLU ALA GLY ALA LEU SER PRO LEU SEQRES 12 B 251 VAL LYS LEU LEU ASP ASP ALA SER GLU GLU VAL ILE LYS SEQRES 13 B 251 ASN ALA VAL ALA ALA ILE ALA ASN ILE ALA ALA GLY ASN SEQRES 14 B 251 ASN GLU GLN ILE GLN LYS LEU ILE GLU ALA GLY ALA LEU SEQRES 15 B 251 SER PRO LEU VAL LYS LEU LEU ASP ASP ALA SER GLU GLU SEQRES 16 B 251 VAL ILE LYS ASN ALA VAL ALA ALA ILE ALA ASN ILE ALA SEQRES 17 B 251 ALA GLY ASN ASN GLU MET LYS GLN LYS LEU GLU GLU ALA SEQRES 18 B 251 GLY ALA LEU PRO ALA LEU GLU LYS LEU GLN SER HIS ALA SEQRES 19 B 251 ASN GLU GLU VAL GLN LYS ASN ALA GLN ALA ALA LEU GLU SEQRES 20 B 251 ALA PHE ASN SER HET GOL A1250 6 HET GOL B1250 6 HET GOL B1251 6 HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 GOL 3(C3 H8 O3) FORMUL 4 HOH *250(H2 O) HELIX 1 1 GLU A 12 LEU A 20 1 9 HELIX 2 2 ASP A 24 SER A 40 1 17 HELIX 3 3 GLY A 42 ALA A 52 1 11 HELIX 4 4 ALA A 54 LEU A 61 1 8 HELIX 5 5 LEU A 62 ASP A 64 5 3 HELIX 6 6 SER A 66 ALA A 81 1 16 HELIX 7 7 ASN A 84 ALA A 94 1 11 HELIX 8 8 ALA A 96 LEU A 103 1 8 HELIX 9 9 LEU A 104 ASP A 106 5 3 HELIX 10 10 SER A 108 ALA A 124 1 17 HELIX 11 11 ASN A 126 ALA A 136 1 11 HELIX 12 12 ALA A 138 LEU A 146 1 9 HELIX 13 13 SER A 150 ALA A 166 1 17 HELIX 14 14 ASN A 168 ALA A 178 1 11 HELIX 15 15 ALA A 180 LEU A 187 1 8 HELIX 16 16 LEU A 188 ASP A 190 5 3 HELIX 17 17 SER A 192 ALA A 208 1 17 HELIX 18 18 ASN A 210 GLY A 221 1 12 HELIX 19 19 GLY A 221 LEU A 229 1 9 HELIX 20 20 GLN A 230 HIS A 232 5 3 HELIX 21 21 ASN A 234 PHE A 248 1 15 HELIX 22 22 GLU B 12 GLN B 19 1 8 HELIX 23 23 LEU B 20 SER B 22 5 3 HELIX 24 24 ASP B 24 SER B 40 1 17 HELIX 25 25 GLY B 42 ALA B 52 1 11 HELIX 26 26 ALA B 54 LEU B 62 1 9 HELIX 27 27 SER B 66 ALA B 82 1 17 HELIX 28 28 ASN B 84 ALA B 94 1 11 HELIX 29 29 ALA B 96 LEU B 103 1 8 HELIX 30 30 SER B 108 ALA B 124 1 17 HELIX 31 31 ASN B 126 ALA B 136 1 11 HELIX 32 32 ALA B 138 LEU B 146 1 9 HELIX 33 33 SER B 150 ALA B 166 1 17 HELIX 34 34 ASN B 168 ALA B 178 1 11 HELIX 35 35 ALA B 180 LEU B 187 1 8 HELIX 36 36 LEU B 188 ASP B 190 5 3 HELIX 37 37 SER B 192 GLY B 209 1 18 HELIX 38 38 ASN B 210 GLU B 219 1 10 HELIX 39 39 GLY B 221 LYS B 228 1 8 HELIX 40 40 LEU B 229 HIS B 232 5 4 HELIX 41 41 ASN B 234 ALA B 247 1 14 SITE 1 AC1 6 LYS A 197 VAL A 200 ALA A 201 ALA A 204 SITE 2 AC1 6 ASN A 240 ALA A 244 SITE 1 AC2 7 ASP A 105 LEU B 97 LYS B 132 GLU B 135 SITE 2 AC2 7 ALA B 136 HOH B2050 HOH B2055 SITE 1 AC3 10 ASN A 127 GLU A 128 ASN A 168 GLY B 125 SITE 2 AC3 10 ASN B 127 ILE B 130 ILE B 164 GLY B 167 SITE 3 AC3 10 ASN B 168 GLN B 171 CRYST1 51.810 68.670 126.840 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019301 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014562 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007884 0.00000