data_4D55 # _entry.id 4D55 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.383 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4D55 pdb_00004d55 10.2210/pdb4d55/pdb PDBE EBI-62070 ? ? WWPDB D_1290062070 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.content_type _pdbx_database_related.details PDB 4D4R unspecified 'FOCAL ADHESION KINASE CATALYTIC DOMAIN' PDB 4D4S unspecified 'FOCAL ADHESION KINASE CATALYTIC DOMAIN' PDB 4D4V unspecified 'FOCAL ADHESION KINASE CATALYTIC DOMAIN' PDB 4D4Y unspecified 'FOCAL ADHESION KINASE CATALYTIC DOMAIN' PDB 4D58 unspecified 'FOCAL ADHESION KINASE CATALYTIC DOMAIN IN COMPLEX WITH BIS-ANILINO PYRIMIDINE INHIBITOR' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4D55 _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2014-11-03 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Le Coq, J.' 1 'Lin, A.' 2 'Lietha, D.' 3 # _citation.id primary _citation.title 'Allosteric Regulation of Focal Adhesion Kinase by Pip2 and ATP.' _citation.journal_abbrev Biophys.J. _citation.journal_volume 108 _citation.page_first 698 _citation.page_last ? _citation.year 2015 _citation.journal_id_ASTM BIOJAU _citation.country US _citation.journal_id_ISSN 0006-3495 _citation.journal_id_CSD 0030 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 25650936 _citation.pdbx_database_id_DOI 10.1016/J.BPJ.2014.11.3454 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Zhou, J.' 1 ? primary 'Bronowska, A.' 2 ? primary 'Le Coq, J.' 3 ? primary 'Lietha, D.' 4 ? primary 'Grater, F.' 5 ? # _cell.entry_id 4D55 _cell.length_a 45.011 _cell.length_b 44.495 _cell.length_c 66.989 _cell.angle_alpha 90.00 _cell.angle_beta 95.00 _cell.angle_gamma 90.00 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4D55 _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'FOCAL ADHESION KINASE' 31731.805 1 2.7.10.2 ? 'KINASE DOMAIN, RESIDUES 411-686' ? 2 non-polymer syn 'SULFATE ION' 96.063 1 ? ? ? ? 3 water nat water 18.015 58 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'FADK 1, FOCAL ADHESION KINASE-RELATED NONKINASE, FRNK, P41/ P43FRNK, PROTEIN-TYROSINE KINASE 2, P125FAK, PP125FAK' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI TENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRY MEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPT LYSLMTKCWAYDPSRRPRFTELKAQLSTILEEEKLQ ; _entity_poly.pdbx_seq_one_letter_code_can ;STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI TENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRY MEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPT LYSLMTKCWAYDPSRRPRFTELKAQLSTILEEEKLQ ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 THR n 1 3 ARG n 1 4 ASP n 1 5 TYR n 1 6 GLU n 1 7 ILE n 1 8 GLN n 1 9 ARG n 1 10 GLU n 1 11 ARG n 1 12 ILE n 1 13 GLU n 1 14 LEU n 1 15 GLY n 1 16 ARG n 1 17 CYS n 1 18 ILE n 1 19 GLY n 1 20 GLU n 1 21 GLY n 1 22 GLN n 1 23 PHE n 1 24 GLY n 1 25 ASP n 1 26 VAL n 1 27 HIS n 1 28 GLN n 1 29 GLY n 1 30 ILE n 1 31 TYR n 1 32 MET n 1 33 SER n 1 34 PRO n 1 35 GLU n 1 36 ASN n 1 37 PRO n 1 38 ALA n 1 39 MET n 1 40 ALA n 1 41 VAL n 1 42 ALA n 1 43 ILE n 1 44 LYS n 1 45 THR n 1 46 CYS n 1 47 LYS n 1 48 ASN n 1 49 CYS n 1 50 THR n 1 51 SER n 1 52 ASP n 1 53 SER n 1 54 VAL n 1 55 ARG n 1 56 GLU n 1 57 LYS n 1 58 PHE n 1 59 LEU n 1 60 GLN n 1 61 GLU n 1 62 ALA n 1 63 LEU n 1 64 THR n 1 65 MET n 1 66 ARG n 1 67 GLN n 1 68 PHE n 1 69 ASP n 1 70 HIS n 1 71 PRO n 1 72 HIS n 1 73 ILE n 1 74 VAL n 1 75 LYS n 1 76 LEU n 1 77 ILE n 1 78 GLY n 1 79 VAL n 1 80 ILE n 1 81 THR n 1 82 GLU n 1 83 ASN n 1 84 PRO n 1 85 VAL n 1 86 TRP n 1 87 ILE n 1 88 ILE n 1 89 MET n 1 90 GLU n 1 91 LEU n 1 92 CYS n 1 93 THR n 1 94 LEU n 1 95 GLY n 1 96 GLU n 1 97 LEU n 1 98 ARG n 1 99 SER n 1 100 PHE n 1 101 LEU n 1 102 GLN n 1 103 VAL n 1 104 ARG n 1 105 LYS n 1 106 PHE n 1 107 SER n 1 108 LEU n 1 109 ASP n 1 110 LEU n 1 111 ALA n 1 112 SER n 1 113 LEU n 1 114 ILE n 1 115 LEU n 1 116 TYR n 1 117 ALA n 1 118 TYR n 1 119 GLN n 1 120 LEU n 1 121 SER n 1 122 THR n 1 123 ALA n 1 124 LEU n 1 125 ALA n 1 126 TYR n 1 127 LEU n 1 128 GLU n 1 129 SER n 1 130 LYS n 1 131 ARG n 1 132 PHE n 1 133 VAL n 1 134 HIS n 1 135 ARG n 1 136 ASP n 1 137 ILE n 1 138 ALA n 1 139 ALA n 1 140 ARG n 1 141 ASN n 1 142 VAL n 1 143 LEU n 1 144 VAL n 1 145 SER n 1 146 ALA n 1 147 THR n 1 148 ASP n 1 149 CYS n 1 150 VAL n 1 151 LYS n 1 152 LEU n 1 153 GLY n 1 154 ASP n 1 155 PHE n 1 156 GLY n 1 157 LEU n 1 158 SER n 1 159 ARG n 1 160 TYR n 1 161 MET n 1 162 GLU n 1 163 ASP n 1 164 SER n 1 165 THR n 1 166 TYR n 1 167 TYR n 1 168 LYS n 1 169 ALA n 1 170 SER n 1 171 LYS n 1 172 GLY n 1 173 LYS n 1 174 LEU n 1 175 PRO n 1 176 ILE n 1 177 LYS n 1 178 TRP n 1 179 MET n 1 180 ALA n 1 181 PRO n 1 182 GLU n 1 183 SER n 1 184 ILE n 1 185 ASN n 1 186 PHE n 1 187 ARG n 1 188 ARG n 1 189 PHE n 1 190 THR n 1 191 SER n 1 192 ALA n 1 193 SER n 1 194 ASP n 1 195 VAL n 1 196 TRP n 1 197 MET n 1 198 PHE n 1 199 GLY n 1 200 VAL n 1 201 CYS n 1 202 MET n 1 203 TRP n 1 204 GLU n 1 205 ILE n 1 206 LEU n 1 207 MET n 1 208 HIS n 1 209 GLY n 1 210 VAL n 1 211 LYS n 1 212 PRO n 1 213 PHE n 1 214 GLN n 1 215 GLY n 1 216 VAL n 1 217 LYS n 1 218 ASN n 1 219 ASN n 1 220 ASP n 1 221 VAL n 1 222 ILE n 1 223 GLY n 1 224 ARG n 1 225 ILE n 1 226 GLU n 1 227 ASN n 1 228 GLY n 1 229 GLU n 1 230 ARG n 1 231 LEU n 1 232 PRO n 1 233 MET n 1 234 PRO n 1 235 PRO n 1 236 ASN n 1 237 CYS n 1 238 PRO n 1 239 PRO n 1 240 THR n 1 241 LEU n 1 242 TYR n 1 243 SER n 1 244 LEU n 1 245 MET n 1 246 THR n 1 247 LYS n 1 248 CYS n 1 249 TRP n 1 250 ALA n 1 251 TYR n 1 252 ASP n 1 253 PRO n 1 254 SER n 1 255 ARG n 1 256 ARG n 1 257 PRO n 1 258 ARG n 1 259 PHE n 1 260 THR n 1 261 GLU n 1 262 LEU n 1 263 LYS n 1 264 ALA n 1 265 GLN n 1 266 LEU n 1 267 SER n 1 268 THR n 1 269 ILE n 1 270 LEU n 1 271 GLU n 1 272 GLU n 1 273 GLU n 1 274 LYS n 1 275 LEU n 1 276 GLN n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name CHICKEN _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'GALLUS GALLUS' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9031 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name 'CABBAGE LOOPER' _entity_src_gen.pdbx_host_org_scientific_name 'TRICHOPLUSIA NI' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 7111 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line 'High Five' _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type BACULOVIRUS _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PACG2T _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code FAK1_CHICK _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_db_accession Q00944 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4D55 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 276 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q00944 _struct_ref_seq.db_align_beg 411 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 686 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 411 _struct_ref_seq.pdbx_auth_seq_align_end 686 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 4D55 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.11 _exptl_crystal.density_percent_sol 41.71 _exptl_crystal.description NONE # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '100 MM TRIS PH 8.5, 300 MM LISO4, 24% PEG4000, 10 MM TCEP' # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector PIXEL _diffrn_detector.type 'DECTRIS PILATUS 6M' _diffrn_detector.pdbx_collection_date 2013-08-13 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.00004 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SLS BEAMLINE X06SA' _diffrn_source.pdbx_synchrotron_site SLS _diffrn_source.pdbx_synchrotron_beamline X06SA _diffrn_source.pdbx_wavelength 1.00004 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 4D55 _reflns.observed_criterion_sigma_I 2.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 66.73 _reflns.d_resolution_high 2.30 _reflns.number_obs 11957 _reflns.number_all ? _reflns.percent_possible_obs 99.9 _reflns.pdbx_Rmerge_I_obs 0.05 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 11.20 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 3.8 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 2.30 _reflns_shell.d_res_low 2.42 _reflns_shell.percent_possible_all 99.8 _reflns_shell.Rmerge_I_obs 0.26 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 2.90 _reflns_shell.pdbx_redundancy 3.8 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 4D55 _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 11320 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 44.88 _refine.ls_d_res_high 2.30 _refine.ls_percent_reflns_obs 99.78 _refine.ls_R_factor_obs 0.20137 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.19827 _refine.ls_R_factor_R_free 0.25712 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.2 _refine.ls_number_reflns_R_free 625 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.951 _refine.correlation_coeff_Fo_to_Fc_free 0.926 _refine.B_iso_mean 46.950 _refine.aniso_B[1][1] 5.39 _refine.aniso_B[2][2] -4.96 _refine.aniso_B[3][3] -0.47 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.48 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. U VALUES WITH TLS ADDED' _refine.pdbx_starting_model 'PDB ENTRY 2JKK' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.420 _refine.pdbx_overall_ESU_R_Free 0.264 _refine.overall_SU_ML 0.193 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 16.321 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2095 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 5 _refine_hist.number_atoms_solvent 58 _refine_hist.number_atoms_total 2158 _refine_hist.d_res_high 2.30 _refine_hist.d_res_low 44.88 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.009 0.019 ? 2158 'X-RAY DIFFRACTION' ? r_bond_other_d 0.002 0.020 ? 2092 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.334 1.970 ? 2919 'X-RAY DIFFRACTION' ? r_angle_other_deg 0.775 3.000 ? 4814 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 6.211 5.000 ? 262 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 34.877 22.990 ? 97 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 16.005 15.000 ? 393 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 21.681 15.000 ? 19 'X-RAY DIFFRACTION' ? r_chiral_restr 0.075 0.200 ? 322 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.005 0.021 ? 2385 'X-RAY DIFFRACTION' ? r_gen_planes_other 0.001 0.020 ? 500 'X-RAY DIFFRACTION' ? r_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? r_scbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.300 _refine_ls_shell.d_res_low 2.360 _refine_ls_shell.number_reflns_R_work 831 _refine_ls_shell.R_factor_R_work 0.278 _refine_ls_shell.percent_reflns_obs 99.66 _refine_ls_shell.R_factor_R_free 0.335 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 55 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # _struct.entry_id 4D55 _struct.title 'Focal Adhesion Kinase catalytic domain' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4D55 _struct_keywords.pdbx_keywords TRANSFERASE _struct_keywords.text 'TRANSFERASE, KINASE INHIBITOR, ATP-BINDING, INTEGRIN SIGNALING' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLN A 8 ? GLU A 10 ? GLN A 418 GLU A 420 5 ? 3 HELX_P HELX_P2 2 SER A 51 ? GLN A 67 ? SER A 461 GLN A 477 1 ? 17 HELX_P HELX_P3 3 LEU A 97 ? ARG A 104 ? LEU A 507 ARG A 514 1 ? 8 HELX_P HELX_P4 4 LYS A 105 ? LEU A 108 ? LYS A 515 LEU A 518 5 ? 4 HELX_P HELX_P5 5 ASP A 109 ? LYS A 130 ? ASP A 519 LYS A 540 1 ? 22 HELX_P HELX_P6 6 ALA A 138 ? ARG A 140 ? ALA A 548 ARG A 550 5 ? 3 HELX_P HELX_P7 7 PRO A 175 ? MET A 179 ? PRO A 585 MET A 589 5 ? 5 HELX_P HELX_P8 8 ALA A 180 ? ARG A 187 ? ALA A 590 ARG A 597 1 ? 8 HELX_P HELX_P9 9 THR A 190 ? MET A 207 ? THR A 600 MET A 617 1 ? 18 HELX_P HELX_P10 10 LYS A 217 ? ASN A 227 ? LYS A 627 ASN A 637 1 ? 11 HELX_P HELX_P11 11 PRO A 238 ? TRP A 249 ? PRO A 648 TRP A 659 1 ? 12 HELX_P HELX_P12 12 ASP A 252 ? ARG A 256 ? ASP A 662 ARG A 666 5 ? 5 HELX_P HELX_P13 13 ARG A 258 ? LEU A 275 ? ARG A 668 LEU A 685 1 ? 18 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA ? 5 ? AB ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA 1 2 ? anti-parallel AA 2 3 ? anti-parallel AA 3 4 ? anti-parallel AA 4 5 ? anti-parallel AB 1 2 ? anti-parallel AB 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA 1 ILE A 12 ? GLU A 20 ? ILE A 422 GLU A 430 AA 2 ASP A 25 ? TYR A 31 ? ASP A 435 TYR A 441 AA 3 MET A 39 ? THR A 45 ? MET A 449 THR A 455 AA 4 TRP A 86 ? GLU A 90 ? TRP A 496 GLU A 500 AA 5 LEU A 76 ? ILE A 80 ? LEU A 486 ILE A 490 AB 1 GLY A 95 ? GLU A 96 ? GLY A 505 GLU A 506 AB 2 VAL A 142 ? ALA A 146 ? VAL A 552 ALA A 556 AB 3 CYS A 149 ? LEU A 152 ? CYS A 559 LEU A 562 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA 1 2 N ILE A 18 ? N ILE A 428 O VAL A 26 ? O VAL A 436 AA 2 3 N TYR A 31 ? N TYR A 441 O MET A 39 ? O MET A 449 AA 3 4 N LYS A 44 ? N LYS A 454 O ILE A 87 ? O ILE A 497 AA 4 5 O ILE A 88 ? O ILE A 498 N ILE A 77 ? N ILE A 487 AB 1 2 O GLY A 95 ? O GLY A 505 N VAL A 144 ? N VAL A 554 AB 2 3 N SER A 145 ? N SER A 555 O CYS A 149 ? O CYS A 559 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id SO4 _struct_site.pdbx_auth_seq_id 1686 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 2 _struct_site.details 'BINDING SITE FOR RESIDUE SO4 A 1686' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 2 ARG A 98 ? ARG A 508 . ? 1_555 ? 2 AC1 2 GLN A 102 ? GLN A 512 . ? 1_555 ? # _database_PDB_matrix.entry_id 4D55 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 4D55 _atom_sites.fract_transf_matrix[1][1] 0.022217 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.001944 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.022474 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.014985 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 411 ? ? ? A . n A 1 2 THR 2 412 ? ? ? A . n A 1 3 ARG 3 413 413 ARG ARG A . n A 1 4 ASP 4 414 414 ASP ASP A . n A 1 5 TYR 5 415 415 TYR TYR A . n A 1 6 GLU 6 416 416 GLU GLU A . n A 1 7 ILE 7 417 417 ILE ILE A . n A 1 8 GLN 8 418 418 GLN GLN A . n A 1 9 ARG 9 419 419 ARG ARG A . n A 1 10 GLU 10 420 420 GLU GLU A . n A 1 11 ARG 11 421 421 ARG ARG A . n A 1 12 ILE 12 422 422 ILE ILE A . n A 1 13 GLU 13 423 423 GLU GLU A . n A 1 14 LEU 14 424 424 LEU LEU A . n A 1 15 GLY 15 425 425 GLY GLY A . n A 1 16 ARG 16 426 426 ARG ARG A . n A 1 17 CYS 17 427 427 CYS CYS A . n A 1 18 ILE 18 428 428 ILE ILE A . n A 1 19 GLY 19 429 429 GLY GLY A . n A 1 20 GLU 20 430 430 GLU GLU A . n A 1 21 GLY 21 431 431 GLY GLY A . n A 1 22 GLN 22 432 432 GLN GLN A . n A 1 23 PHE 23 433 433 PHE PHE A . n A 1 24 GLY 24 434 434 GLY GLY A . n A 1 25 ASP 25 435 435 ASP ASP A . n A 1 26 VAL 26 436 436 VAL VAL A . n A 1 27 HIS 27 437 437 HIS HIS A . n A 1 28 GLN 28 438 438 GLN GLN A . n A 1 29 GLY 29 439 439 GLY GLY A . n A 1 30 ILE 30 440 440 ILE ILE A . n A 1 31 TYR 31 441 441 TYR TYR A . n A 1 32 MET 32 442 442 MET MET A . n A 1 33 SER 33 443 443 SER SER A . n A 1 34 PRO 34 444 444 PRO PRO A . n A 1 35 GLU 35 445 445 GLU GLU A . n A 1 36 ASN 36 446 446 ASN ASN A . n A 1 37 PRO 37 447 447 PRO PRO A . n A 1 38 ALA 38 448 448 ALA ALA A . n A 1 39 MET 39 449 449 MET MET A . n A 1 40 ALA 40 450 450 ALA ALA A . n A 1 41 VAL 41 451 451 VAL VAL A . n A 1 42 ALA 42 452 452 ALA ALA A . n A 1 43 ILE 43 453 453 ILE ILE A . n A 1 44 LYS 44 454 454 LYS LYS A . n A 1 45 THR 45 455 455 THR THR A . n A 1 46 CYS 46 456 456 CYS CYS A . n A 1 47 LYS 47 457 457 LYS LYS A . n A 1 48 ASN 48 458 458 ASN ASN A . n A 1 49 CYS 49 459 459 CYS CYS A . n A 1 50 THR 50 460 460 THR THR A . n A 1 51 SER 51 461 461 SER SER A . n A 1 52 ASP 52 462 462 ASP ASP A . n A 1 53 SER 53 463 463 SER SER A . n A 1 54 VAL 54 464 464 VAL VAL A . n A 1 55 ARG 55 465 465 ARG ARG A . n A 1 56 GLU 56 466 466 GLU GLU A . n A 1 57 LYS 57 467 467 LYS LYS A . n A 1 58 PHE 58 468 468 PHE PHE A . n A 1 59 LEU 59 469 469 LEU LEU A . n A 1 60 GLN 60 470 470 GLN GLN A . n A 1 61 GLU 61 471 471 GLU GLU A . n A 1 62 ALA 62 472 472 ALA ALA A . n A 1 63 LEU 63 473 473 LEU LEU A . n A 1 64 THR 64 474 474 THR THR A . n A 1 65 MET 65 475 475 MET MET A . n A 1 66 ARG 66 476 476 ARG ARG A . n A 1 67 GLN 67 477 477 GLN GLN A . n A 1 68 PHE 68 478 478 PHE PHE A . n A 1 69 ASP 69 479 479 ASP ASP A . n A 1 70 HIS 70 480 480 HIS HIS A . n A 1 71 PRO 71 481 481 PRO PRO A . n A 1 72 HIS 72 482 482 HIS HIS A . n A 1 73 ILE 73 483 483 ILE ILE A . n A 1 74 VAL 74 484 484 VAL VAL A . n A 1 75 LYS 75 485 485 LYS LYS A . n A 1 76 LEU 76 486 486 LEU LEU A . n A 1 77 ILE 77 487 487 ILE ILE A . n A 1 78 GLY 78 488 488 GLY GLY A . n A 1 79 VAL 79 489 489 VAL VAL A . n A 1 80 ILE 80 490 490 ILE ILE A . n A 1 81 THR 81 491 491 THR THR A . n A 1 82 GLU 82 492 492 GLU GLU A . n A 1 83 ASN 83 493 493 ASN ASN A . n A 1 84 PRO 84 494 494 PRO PRO A . n A 1 85 VAL 85 495 495 VAL VAL A . n A 1 86 TRP 86 496 496 TRP TRP A . n A 1 87 ILE 87 497 497 ILE ILE A . n A 1 88 ILE 88 498 498 ILE ILE A . n A 1 89 MET 89 499 499 MET MET A . n A 1 90 GLU 90 500 500 GLU GLU A . n A 1 91 LEU 91 501 501 LEU LEU A . n A 1 92 CYS 92 502 502 CYS CYS A . n A 1 93 THR 93 503 503 THR THR A . n A 1 94 LEU 94 504 504 LEU LEU A . n A 1 95 GLY 95 505 505 GLY GLY A . n A 1 96 GLU 96 506 506 GLU GLU A . n A 1 97 LEU 97 507 507 LEU LEU A . n A 1 98 ARG 98 508 508 ARG ARG A . n A 1 99 SER 99 509 509 SER SER A . n A 1 100 PHE 100 510 510 PHE PHE A . n A 1 101 LEU 101 511 511 LEU LEU A . n A 1 102 GLN 102 512 512 GLN GLN A . n A 1 103 VAL 103 513 513 VAL VAL A . n A 1 104 ARG 104 514 514 ARG ARG A . n A 1 105 LYS 105 515 515 LYS LYS A . n A 1 106 PHE 106 516 516 PHE PHE A . n A 1 107 SER 107 517 517 SER SER A . n A 1 108 LEU 108 518 518 LEU LEU A . n A 1 109 ASP 109 519 519 ASP ASP A . n A 1 110 LEU 110 520 520 LEU LEU A . n A 1 111 ALA 111 521 521 ALA ALA A . n A 1 112 SER 112 522 522 SER SER A . n A 1 113 LEU 113 523 523 LEU LEU A . n A 1 114 ILE 114 524 524 ILE ILE A . n A 1 115 LEU 115 525 525 LEU LEU A . n A 1 116 TYR 116 526 526 TYR TYR A . n A 1 117 ALA 117 527 527 ALA ALA A . n A 1 118 TYR 118 528 528 TYR TYR A . n A 1 119 GLN 119 529 529 GLN GLN A . n A 1 120 LEU 120 530 530 LEU LEU A . n A 1 121 SER 121 531 531 SER SER A . n A 1 122 THR 122 532 532 THR THR A . n A 1 123 ALA 123 533 533 ALA ALA A . n A 1 124 LEU 124 534 534 LEU LEU A . n A 1 125 ALA 125 535 535 ALA ALA A . n A 1 126 TYR 126 536 536 TYR TYR A . n A 1 127 LEU 127 537 537 LEU LEU A . n A 1 128 GLU 128 538 538 GLU GLU A . n A 1 129 SER 129 539 539 SER SER A . n A 1 130 LYS 130 540 540 LYS LYS A . n A 1 131 ARG 131 541 541 ARG ARG A . n A 1 132 PHE 132 542 542 PHE PHE A . n A 1 133 VAL 133 543 543 VAL VAL A . n A 1 134 HIS 134 544 544 HIS HIS A . n A 1 135 ARG 135 545 545 ARG ARG A . n A 1 136 ASP 136 546 546 ASP ASP A . n A 1 137 ILE 137 547 547 ILE ILE A . n A 1 138 ALA 138 548 548 ALA ALA A . n A 1 139 ALA 139 549 549 ALA ALA A . n A 1 140 ARG 140 550 550 ARG ARG A . n A 1 141 ASN 141 551 551 ASN ASN A . n A 1 142 VAL 142 552 552 VAL VAL A . n A 1 143 LEU 143 553 553 LEU LEU A . n A 1 144 VAL 144 554 554 VAL VAL A . n A 1 145 SER 145 555 555 SER SER A . n A 1 146 ALA 146 556 556 ALA ALA A . n A 1 147 THR 147 557 557 THR THR A . n A 1 148 ASP 148 558 558 ASP ASP A . n A 1 149 CYS 149 559 559 CYS CYS A . n A 1 150 VAL 150 560 560 VAL VAL A . n A 1 151 LYS 151 561 561 LYS LYS A . n A 1 152 LEU 152 562 562 LEU LEU A . n A 1 153 GLY 153 563 563 GLY GLY A . n A 1 154 ASP 154 564 564 ASP ASP A . n A 1 155 PHE 155 565 565 PHE PHE A . n A 1 156 GLY 156 566 566 GLY GLY A . n A 1 157 LEU 157 567 567 LEU LEU A . n A 1 158 SER 158 568 568 SER SER A . n A 1 159 ARG 159 569 569 ARG ARG A . n A 1 160 TYR 160 570 570 TYR TYR A . n A 1 161 MET 161 571 ? ? ? A . n A 1 162 GLU 162 572 ? ? ? A . n A 1 163 ASP 163 573 ? ? ? A . n A 1 164 SER 164 574 ? ? ? A . n A 1 165 THR 165 575 ? ? ? A . n A 1 166 TYR 166 576 ? ? ? A . n A 1 167 TYR 167 577 ? ? ? A . n A 1 168 LYS 168 578 ? ? ? A . n A 1 169 ALA 169 579 ? ? ? A . n A 1 170 SER 170 580 ? ? ? A . n A 1 171 LYS 171 581 ? ? ? A . n A 1 172 GLY 172 582 ? ? ? A . n A 1 173 LYS 173 583 ? ? ? A . n A 1 174 LEU 174 584 584 LEU LEU A . n A 1 175 PRO 175 585 585 PRO PRO A . n A 1 176 ILE 176 586 586 ILE ILE A . n A 1 177 LYS 177 587 587 LYS LYS A . n A 1 178 TRP 178 588 588 TRP TRP A . n A 1 179 MET 179 589 589 MET MET A . n A 1 180 ALA 180 590 590 ALA ALA A . n A 1 181 PRO 181 591 591 PRO PRO A . n A 1 182 GLU 182 592 592 GLU GLU A . n A 1 183 SER 183 593 593 SER SER A . n A 1 184 ILE 184 594 594 ILE ILE A . n A 1 185 ASN 185 595 595 ASN ASN A . n A 1 186 PHE 186 596 596 PHE PHE A . n A 1 187 ARG 187 597 597 ARG ARG A . n A 1 188 ARG 188 598 598 ARG ARG A . n A 1 189 PHE 189 599 599 PHE PHE A . n A 1 190 THR 190 600 600 THR THR A . n A 1 191 SER 191 601 601 SER SER A . n A 1 192 ALA 192 602 602 ALA ALA A . n A 1 193 SER 193 603 603 SER SER A . n A 1 194 ASP 194 604 604 ASP ASP A . n A 1 195 VAL 195 605 605 VAL VAL A . n A 1 196 TRP 196 606 606 TRP TRP A . n A 1 197 MET 197 607 607 MET MET A . n A 1 198 PHE 198 608 608 PHE PHE A . n A 1 199 GLY 199 609 609 GLY GLY A . n A 1 200 VAL 200 610 610 VAL VAL A . n A 1 201 CYS 201 611 611 CYS CYS A . n A 1 202 MET 202 612 612 MET MET A . n A 1 203 TRP 203 613 613 TRP TRP A . n A 1 204 GLU 204 614 614 GLU GLU A . n A 1 205 ILE 205 615 615 ILE ILE A . n A 1 206 LEU 206 616 616 LEU LEU A . n A 1 207 MET 207 617 617 MET MET A . n A 1 208 HIS 208 618 618 HIS HIS A . n A 1 209 GLY 209 619 619 GLY GLY A . n A 1 210 VAL 210 620 620 VAL VAL A . n A 1 211 LYS 211 621 621 LYS LYS A . n A 1 212 PRO 212 622 622 PRO PRO A . n A 1 213 PHE 213 623 623 PHE PHE A . n A 1 214 GLN 214 624 624 GLN GLN A . n A 1 215 GLY 215 625 625 GLY GLY A . n A 1 216 VAL 216 626 626 VAL VAL A . n A 1 217 LYS 217 627 627 LYS LYS A . n A 1 218 ASN 218 628 628 ASN ASN A . n A 1 219 ASN 219 629 629 ASN ASN A . n A 1 220 ASP 220 630 630 ASP ASP A . n A 1 221 VAL 221 631 631 VAL VAL A . n A 1 222 ILE 222 632 632 ILE ILE A . n A 1 223 GLY 223 633 633 GLY GLY A . n A 1 224 ARG 224 634 634 ARG ARG A . n A 1 225 ILE 225 635 635 ILE ILE A . n A 1 226 GLU 226 636 636 GLU GLU A . n A 1 227 ASN 227 637 637 ASN ASN A . n A 1 228 GLY 228 638 638 GLY GLY A . n A 1 229 GLU 229 639 639 GLU GLU A . n A 1 230 ARG 230 640 640 ARG ARG A . n A 1 231 LEU 231 641 641 LEU LEU A . n A 1 232 PRO 232 642 642 PRO PRO A . n A 1 233 MET 233 643 643 MET MET A . n A 1 234 PRO 234 644 644 PRO PRO A . n A 1 235 PRO 235 645 645 PRO PRO A . n A 1 236 ASN 236 646 646 ASN ASN A . n A 1 237 CYS 237 647 647 CYS CYS A . n A 1 238 PRO 238 648 648 PRO PRO A . n A 1 239 PRO 239 649 649 PRO PRO A . n A 1 240 THR 240 650 650 THR THR A . n A 1 241 LEU 241 651 651 LEU LEU A . n A 1 242 TYR 242 652 652 TYR TYR A . n A 1 243 SER 243 653 653 SER SER A . n A 1 244 LEU 244 654 654 LEU LEU A . n A 1 245 MET 245 655 655 MET MET A . n A 1 246 THR 246 656 656 THR THR A . n A 1 247 LYS 247 657 657 LYS LYS A . n A 1 248 CYS 248 658 658 CYS CYS A . n A 1 249 TRP 249 659 659 TRP TRP A . n A 1 250 ALA 250 660 660 ALA ALA A . n A 1 251 TYR 251 661 661 TYR TYR A . n A 1 252 ASP 252 662 662 ASP ASP A . n A 1 253 PRO 253 663 663 PRO PRO A . n A 1 254 SER 254 664 664 SER SER A . n A 1 255 ARG 255 665 665 ARG ARG A . n A 1 256 ARG 256 666 666 ARG ARG A . n A 1 257 PRO 257 667 667 PRO PRO A . n A 1 258 ARG 258 668 668 ARG ARG A . n A 1 259 PHE 259 669 669 PHE PHE A . n A 1 260 THR 260 670 670 THR THR A . n A 1 261 GLU 261 671 671 GLU GLU A . n A 1 262 LEU 262 672 672 LEU LEU A . n A 1 263 LYS 263 673 673 LYS LYS A . n A 1 264 ALA 264 674 674 ALA ALA A . n A 1 265 GLN 265 675 675 GLN GLN A . n A 1 266 LEU 266 676 676 LEU LEU A . n A 1 267 SER 267 677 677 SER SER A . n A 1 268 THR 268 678 678 THR THR A . n A 1 269 ILE 269 679 679 ILE ILE A . n A 1 270 LEU 270 680 680 LEU LEU A . n A 1 271 GLU 271 681 681 GLU GLU A . n A 1 272 GLU 272 682 682 GLU GLU A . n A 1 273 GLU 273 683 683 GLU GLU A . n A 1 274 LYS 274 684 684 LYS LYS A . n A 1 275 LEU 275 685 685 LEU LEU A . n A 1 276 GLN 276 686 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 1 1686 1686 SO4 SO4 A . C 3 HOH 1 2001 2001 HOH HOH A . C 3 HOH 2 2002 2002 HOH HOH A . C 3 HOH 3 2003 2003 HOH HOH A . C 3 HOH 4 2004 2004 HOH HOH A . C 3 HOH 5 2005 2005 HOH HOH A . C 3 HOH 6 2006 2006 HOH HOH A . C 3 HOH 7 2007 2007 HOH HOH A . C 3 HOH 8 2008 2008 HOH HOH A . C 3 HOH 9 2009 2009 HOH HOH A . C 3 HOH 10 2010 2010 HOH HOH A . C 3 HOH 11 2011 2011 HOH HOH A . C 3 HOH 12 2012 2012 HOH HOH A . C 3 HOH 13 2013 2013 HOH HOH A . C 3 HOH 14 2014 2014 HOH HOH A . C 3 HOH 15 2015 2015 HOH HOH A . C 3 HOH 16 2016 2016 HOH HOH A . C 3 HOH 17 2017 2017 HOH HOH A . C 3 HOH 18 2018 2018 HOH HOH A . C 3 HOH 19 2019 2019 HOH HOH A . C 3 HOH 20 2020 2020 HOH HOH A . C 3 HOH 21 2021 2021 HOH HOH A . C 3 HOH 22 2022 2022 HOH HOH A . C 3 HOH 23 2023 2023 HOH HOH A . C 3 HOH 24 2024 2024 HOH HOH A . C 3 HOH 25 2025 2025 HOH HOH A . C 3 HOH 26 2026 2026 HOH HOH A . C 3 HOH 27 2027 2027 HOH HOH A . C 3 HOH 28 2028 2028 HOH HOH A . C 3 HOH 29 2029 2029 HOH HOH A . C 3 HOH 30 2030 2030 HOH HOH A . C 3 HOH 31 2031 2031 HOH HOH A . C 3 HOH 32 2032 2032 HOH HOH A . C 3 HOH 33 2033 2033 HOH HOH A . C 3 HOH 34 2034 2034 HOH HOH A . C 3 HOH 35 2035 2035 HOH HOH A . C 3 HOH 36 2036 2036 HOH HOH A . C 3 HOH 37 2037 2037 HOH HOH A . C 3 HOH 38 2038 2038 HOH HOH A . C 3 HOH 39 2039 2039 HOH HOH A . C 3 HOH 40 2040 2040 HOH HOH A . C 3 HOH 41 2041 2041 HOH HOH A . C 3 HOH 42 2042 2042 HOH HOH A . C 3 HOH 43 2043 2043 HOH HOH A . C 3 HOH 44 2044 2044 HOH HOH A . C 3 HOH 45 2045 2045 HOH HOH A . C 3 HOH 46 2046 2046 HOH HOH A . C 3 HOH 47 2047 2047 HOH HOH A . C 3 HOH 48 2048 2048 HOH HOH A . C 3 HOH 49 2049 2049 HOH HOH A . C 3 HOH 50 2050 2050 HOH HOH A . C 3 HOH 51 2051 2051 HOH HOH A . C 3 HOH 52 2052 2052 HOH HOH A . C 3 HOH 53 2053 2053 HOH HOH A . C 3 HOH 54 2054 2054 HOH HOH A . C 3 HOH 55 2055 2055 HOH HOH A . C 3 HOH 56 2056 2056 HOH HOH A . C 3 HOH 57 2057 2057 HOH HOH A . C 3 HOH 58 2058 2058 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2015-02-18 2 'Structure model' 1 1 2019-04-03 3 'Structure model' 1 2 2023-12-20 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' Other 3 2 'Structure model' 'Source and taxonomy' 4 3 'Structure model' 'Data collection' 5 3 'Structure model' 'Database references' 6 3 'Structure model' 'Derived calculations' 7 3 'Structure model' Other 8 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' entity_src_gen 2 2 'Structure model' pdbx_database_proc 3 2 'Structure model' pdbx_database_status 4 3 'Structure model' chem_comp_atom 5 3 'Structure model' chem_comp_bond 6 3 'Structure model' database_2 7 3 'Structure model' pdbx_database_status 8 3 'Structure model' pdbx_initial_refinement_model 9 3 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_entity_src_gen.pdbx_host_org_cell_line' 2 2 'Structure model' '_pdbx_database_status.recvd_author_approval' 3 3 'Structure model' '_database_2.pdbx_DOI' 4 3 'Structure model' '_database_2.pdbx_database_accession' 5 3 'Structure model' '_pdbx_database_status.status_code_sf' 6 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 7 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 8 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined 5.8860 13.7880 28.5170 0.1336 0.4092 0.2179 0.0309 0.0323 -0.0008 1.6659 4.6337 5.8145 0.3460 -0.0845 2.1469 -0.0306 -0.1793 0.3104 0.3352 -0.1664 0.0333 -0.2153 0.2839 0.1970 'X-RAY DIFFRACTION' 2 ? refined 13.3000 -4.3480 10.2660 0.0157 0.2630 0.0251 -0.0044 0.0078 -0.0149 3.3772 2.8629 3.2015 -0.2021 -1.2861 -0.1357 0.1342 0.0317 0.0354 -0.0753 -0.1199 -0.0996 -0.1940 0.1097 -0.0143 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 A 413 ? ? A 502 ? ? ? ? 'X-RAY DIFFRACTION' 2 2 A 504 ? ? A 685 ? ? ? ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.7.0029 ? 1 XDS 'data reduction' . ? 2 SCALA 'data scaling' . ? 3 PHASER phasing . ? 4 # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 C _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 ASN _pdbx_validate_rmsd_angle.auth_seq_id_1 493 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 N _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 PRO _pdbx_validate_rmsd_angle.auth_seq_id_2 494 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 CA _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 PRO _pdbx_validate_rmsd_angle.auth_seq_id_3 494 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 108.97 _pdbx_validate_rmsd_angle.angle_target_value 119.30 _pdbx_validate_rmsd_angle.angle_deviation -10.33 _pdbx_validate_rmsd_angle.angle_standard_deviation 1.50 _pdbx_validate_rmsd_angle.linker_flag Y # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLU A 445 ? ? 69.44 -35.47 2 1 PRO A 494 ? ? -67.07 90.28 3 1 ASP A 546 ? ? -149.92 46.98 4 1 CYS A 559 ? ? -164.24 107.77 5 1 ASP A 564 ? ? 50.20 79.76 6 1 PHE A 565 ? ? -106.48 46.83 7 1 ARG A 569 ? ? -119.67 -99.86 8 1 ASN A 646 ? ? 72.21 -1.22 # _pdbx_validate_peptide_omega.id 1 _pdbx_validate_peptide_omega.PDB_model_num 1 _pdbx_validate_peptide_omega.auth_comp_id_1 GLU _pdbx_validate_peptide_omega.auth_asym_id_1 A _pdbx_validate_peptide_omega.auth_seq_id_1 492 _pdbx_validate_peptide_omega.PDB_ins_code_1 ? _pdbx_validate_peptide_omega.label_alt_id_1 ? _pdbx_validate_peptide_omega.auth_comp_id_2 ASN _pdbx_validate_peptide_omega.auth_asym_id_2 A _pdbx_validate_peptide_omega.auth_seq_id_2 493 _pdbx_validate_peptide_omega.PDB_ins_code_2 ? _pdbx_validate_peptide_omega.label_alt_id_2 ? _pdbx_validate_peptide_omega.omega -146.24 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A SER 411 ? A SER 1 2 1 Y 1 A THR 412 ? A THR 2 3 1 Y 1 A MET 571 ? A MET 161 4 1 Y 1 A GLU 572 ? A GLU 162 5 1 Y 1 A ASP 573 ? A ASP 163 6 1 Y 1 A SER 574 ? A SER 164 7 1 Y 1 A THR 575 ? A THR 165 8 1 Y 1 A TYR 576 ? A TYR 166 9 1 Y 1 A TYR 577 ? A TYR 167 10 1 Y 1 A LYS 578 ? A LYS 168 11 1 Y 1 A ALA 579 ? A ALA 169 12 1 Y 1 A SER 580 ? A SER 170 13 1 Y 1 A LYS 581 ? A LYS 171 14 1 Y 1 A GLY 582 ? A GLY 172 15 1 Y 1 A LYS 583 ? A LYS 173 16 1 Y 1 A GLN 686 ? A GLN 276 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 HOH O O N N 158 HOH H1 H N N 159 HOH H2 H N N 160 ILE N N N N 161 ILE CA C N S 162 ILE C C N N 163 ILE O O N N 164 ILE CB C N S 165 ILE CG1 C N N 166 ILE CG2 C N N 167 ILE CD1 C N N 168 ILE OXT O N N 169 ILE H H N N 170 ILE H2 H N N 171 ILE HA H N N 172 ILE HB H N N 173 ILE HG12 H N N 174 ILE HG13 H N N 175 ILE HG21 H N N 176 ILE HG22 H N N 177 ILE HG23 H N N 178 ILE HD11 H N N 179 ILE HD12 H N N 180 ILE HD13 H N N 181 ILE HXT H N N 182 LEU N N N N 183 LEU CA C N S 184 LEU C C N N 185 LEU O O N N 186 LEU CB C N N 187 LEU CG C N N 188 LEU CD1 C N N 189 LEU CD2 C N N 190 LEU OXT O N N 191 LEU H H N N 192 LEU H2 H N N 193 LEU HA H N N 194 LEU HB2 H N N 195 LEU HB3 H N N 196 LEU HG H N N 197 LEU HD11 H N N 198 LEU HD12 H N N 199 LEU HD13 H N N 200 LEU HD21 H N N 201 LEU HD22 H N N 202 LEU HD23 H N N 203 LEU HXT H N N 204 LYS N N N N 205 LYS CA C N S 206 LYS C C N N 207 LYS O O N N 208 LYS CB C N N 209 LYS CG C N N 210 LYS CD C N N 211 LYS CE C N N 212 LYS NZ N N N 213 LYS OXT O N N 214 LYS H H N N 215 LYS H2 H N N 216 LYS HA H N N 217 LYS HB2 H N N 218 LYS HB3 H N N 219 LYS HG2 H N N 220 LYS HG3 H N N 221 LYS HD2 H N N 222 LYS HD3 H N N 223 LYS HE2 H N N 224 LYS HE3 H N N 225 LYS HZ1 H N N 226 LYS HZ2 H N N 227 LYS HZ3 H N N 228 LYS HXT H N N 229 MET N N N N 230 MET CA C N S 231 MET C C N N 232 MET O O N N 233 MET CB C N N 234 MET CG C N N 235 MET SD S N N 236 MET CE C N N 237 MET OXT O N N 238 MET H H N N 239 MET H2 H N N 240 MET HA H N N 241 MET HB2 H N N 242 MET HB3 H N N 243 MET HG2 H N N 244 MET HG3 H N N 245 MET HE1 H N N 246 MET HE2 H N N 247 MET HE3 H N N 248 MET HXT H N N 249 PHE N N N N 250 PHE CA C N S 251 PHE C C N N 252 PHE O O N N 253 PHE CB C N N 254 PHE CG C Y N 255 PHE CD1 C Y N 256 PHE CD2 C Y N 257 PHE CE1 C Y N 258 PHE CE2 C Y N 259 PHE CZ C Y N 260 PHE OXT O N N 261 PHE H H N N 262 PHE H2 H N N 263 PHE HA H N N 264 PHE HB2 H N N 265 PHE HB3 H N N 266 PHE HD1 H N N 267 PHE HD2 H N N 268 PHE HE1 H N N 269 PHE HE2 H N N 270 PHE HZ H N N 271 PHE HXT H N N 272 PRO N N N N 273 PRO CA C N S 274 PRO C C N N 275 PRO O O N N 276 PRO CB C N N 277 PRO CG C N N 278 PRO CD C N N 279 PRO OXT O N N 280 PRO H H N N 281 PRO HA H N N 282 PRO HB2 H N N 283 PRO HB3 H N N 284 PRO HG2 H N N 285 PRO HG3 H N N 286 PRO HD2 H N N 287 PRO HD3 H N N 288 PRO HXT H N N 289 SER N N N N 290 SER CA C N S 291 SER C C N N 292 SER O O N N 293 SER CB C N N 294 SER OG O N N 295 SER OXT O N N 296 SER H H N N 297 SER H2 H N N 298 SER HA H N N 299 SER HB2 H N N 300 SER HB3 H N N 301 SER HG H N N 302 SER HXT H N N 303 SO4 S S N N 304 SO4 O1 O N N 305 SO4 O2 O N N 306 SO4 O3 O N N 307 SO4 O4 O N N 308 THR N N N N 309 THR CA C N S 310 THR C C N N 311 THR O O N N 312 THR CB C N R 313 THR OG1 O N N 314 THR CG2 C N N 315 THR OXT O N N 316 THR H H N N 317 THR H2 H N N 318 THR HA H N N 319 THR HB H N N 320 THR HG1 H N N 321 THR HG21 H N N 322 THR HG22 H N N 323 THR HG23 H N N 324 THR HXT H N N 325 TRP N N N N 326 TRP CA C N S 327 TRP C C N N 328 TRP O O N N 329 TRP CB C N N 330 TRP CG C Y N 331 TRP CD1 C Y N 332 TRP CD2 C Y N 333 TRP NE1 N Y N 334 TRP CE2 C Y N 335 TRP CE3 C Y N 336 TRP CZ2 C Y N 337 TRP CZ3 C Y N 338 TRP CH2 C Y N 339 TRP OXT O N N 340 TRP H H N N 341 TRP H2 H N N 342 TRP HA H N N 343 TRP HB2 H N N 344 TRP HB3 H N N 345 TRP HD1 H N N 346 TRP HE1 H N N 347 TRP HE3 H N N 348 TRP HZ2 H N N 349 TRP HZ3 H N N 350 TRP HH2 H N N 351 TRP HXT H N N 352 TYR N N N N 353 TYR CA C N S 354 TYR C C N N 355 TYR O O N N 356 TYR CB C N N 357 TYR CG C Y N 358 TYR CD1 C Y N 359 TYR CD2 C Y N 360 TYR CE1 C Y N 361 TYR CE2 C Y N 362 TYR CZ C Y N 363 TYR OH O N N 364 TYR OXT O N N 365 TYR H H N N 366 TYR H2 H N N 367 TYR HA H N N 368 TYR HB2 H N N 369 TYR HB3 H N N 370 TYR HD1 H N N 371 TYR HD2 H N N 372 TYR HE1 H N N 373 TYR HE2 H N N 374 TYR HH H N N 375 TYR HXT H N N 376 VAL N N N N 377 VAL CA C N S 378 VAL C C N N 379 VAL O O N N 380 VAL CB C N N 381 VAL CG1 C N N 382 VAL CG2 C N N 383 VAL OXT O N N 384 VAL H H N N 385 VAL H2 H N N 386 VAL HA H N N 387 VAL HB H N N 388 VAL HG11 H N N 389 VAL HG12 H N N 390 VAL HG13 H N N 391 VAL HG21 H N N 392 VAL HG22 H N N 393 VAL HG23 H N N 394 VAL HXT H N N 395 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 ILE N CA sing N N 152 ILE N H sing N N 153 ILE N H2 sing N N 154 ILE CA C sing N N 155 ILE CA CB sing N N 156 ILE CA HA sing N N 157 ILE C O doub N N 158 ILE C OXT sing N N 159 ILE CB CG1 sing N N 160 ILE CB CG2 sing N N 161 ILE CB HB sing N N 162 ILE CG1 CD1 sing N N 163 ILE CG1 HG12 sing N N 164 ILE CG1 HG13 sing N N 165 ILE CG2 HG21 sing N N 166 ILE CG2 HG22 sing N N 167 ILE CG2 HG23 sing N N 168 ILE CD1 HD11 sing N N 169 ILE CD1 HD12 sing N N 170 ILE CD1 HD13 sing N N 171 ILE OXT HXT sing N N 172 LEU N CA sing N N 173 LEU N H sing N N 174 LEU N H2 sing N N 175 LEU CA C sing N N 176 LEU CA CB sing N N 177 LEU CA HA sing N N 178 LEU C O doub N N 179 LEU C OXT sing N N 180 LEU CB CG sing N N 181 LEU CB HB2 sing N N 182 LEU CB HB3 sing N N 183 LEU CG CD1 sing N N 184 LEU CG CD2 sing N N 185 LEU CG HG sing N N 186 LEU CD1 HD11 sing N N 187 LEU CD1 HD12 sing N N 188 LEU CD1 HD13 sing N N 189 LEU CD2 HD21 sing N N 190 LEU CD2 HD22 sing N N 191 LEU CD2 HD23 sing N N 192 LEU OXT HXT sing N N 193 LYS N CA sing N N 194 LYS N H sing N N 195 LYS N H2 sing N N 196 LYS CA C sing N N 197 LYS CA CB sing N N 198 LYS CA HA sing N N 199 LYS C O doub N N 200 LYS C OXT sing N N 201 LYS CB CG sing N N 202 LYS CB HB2 sing N N 203 LYS CB HB3 sing N N 204 LYS CG CD sing N N 205 LYS CG HG2 sing N N 206 LYS CG HG3 sing N N 207 LYS CD CE sing N N 208 LYS CD HD2 sing N N 209 LYS CD HD3 sing N N 210 LYS CE NZ sing N N 211 LYS CE HE2 sing N N 212 LYS CE HE3 sing N N 213 LYS NZ HZ1 sing N N 214 LYS NZ HZ2 sing N N 215 LYS NZ HZ3 sing N N 216 LYS OXT HXT sing N N 217 MET N CA sing N N 218 MET N H sing N N 219 MET N H2 sing N N 220 MET CA C sing N N 221 MET CA CB sing N N 222 MET CA HA sing N N 223 MET C O doub N N 224 MET C OXT sing N N 225 MET CB CG sing N N 226 MET CB HB2 sing N N 227 MET CB HB3 sing N N 228 MET CG SD sing N N 229 MET CG HG2 sing N N 230 MET CG HG3 sing N N 231 MET SD CE sing N N 232 MET CE HE1 sing N N 233 MET CE HE2 sing N N 234 MET CE HE3 sing N N 235 MET OXT HXT sing N N 236 PHE N CA sing N N 237 PHE N H sing N N 238 PHE N H2 sing N N 239 PHE CA C sing N N 240 PHE CA CB sing N N 241 PHE CA HA sing N N 242 PHE C O doub N N 243 PHE C OXT sing N N 244 PHE CB CG sing N N 245 PHE CB HB2 sing N N 246 PHE CB HB3 sing N N 247 PHE CG CD1 doub Y N 248 PHE CG CD2 sing Y N 249 PHE CD1 CE1 sing Y N 250 PHE CD1 HD1 sing N N 251 PHE CD2 CE2 doub Y N 252 PHE CD2 HD2 sing N N 253 PHE CE1 CZ doub Y N 254 PHE CE1 HE1 sing N N 255 PHE CE2 CZ sing Y N 256 PHE CE2 HE2 sing N N 257 PHE CZ HZ sing N N 258 PHE OXT HXT sing N N 259 PRO N CA sing N N 260 PRO N CD sing N N 261 PRO N H sing N N 262 PRO CA C sing N N 263 PRO CA CB sing N N 264 PRO CA HA sing N N 265 PRO C O doub N N 266 PRO C OXT sing N N 267 PRO CB CG sing N N 268 PRO CB HB2 sing N N 269 PRO CB HB3 sing N N 270 PRO CG CD sing N N 271 PRO CG HG2 sing N N 272 PRO CG HG3 sing N N 273 PRO CD HD2 sing N N 274 PRO CD HD3 sing N N 275 PRO OXT HXT sing N N 276 SER N CA sing N N 277 SER N H sing N N 278 SER N H2 sing N N 279 SER CA C sing N N 280 SER CA CB sing N N 281 SER CA HA sing N N 282 SER C O doub N N 283 SER C OXT sing N N 284 SER CB OG sing N N 285 SER CB HB2 sing N N 286 SER CB HB3 sing N N 287 SER OG HG sing N N 288 SER OXT HXT sing N N 289 SO4 S O1 doub N N 290 SO4 S O2 doub N N 291 SO4 S O3 sing N N 292 SO4 S O4 sing N N 293 THR N CA sing N N 294 THR N H sing N N 295 THR N H2 sing N N 296 THR CA C sing N N 297 THR CA CB sing N N 298 THR CA HA sing N N 299 THR C O doub N N 300 THR C OXT sing N N 301 THR CB OG1 sing N N 302 THR CB CG2 sing N N 303 THR CB HB sing N N 304 THR OG1 HG1 sing N N 305 THR CG2 HG21 sing N N 306 THR CG2 HG22 sing N N 307 THR CG2 HG23 sing N N 308 THR OXT HXT sing N N 309 TRP N CA sing N N 310 TRP N H sing N N 311 TRP N H2 sing N N 312 TRP CA C sing N N 313 TRP CA CB sing N N 314 TRP CA HA sing N N 315 TRP C O doub N N 316 TRP C OXT sing N N 317 TRP CB CG sing N N 318 TRP CB HB2 sing N N 319 TRP CB HB3 sing N N 320 TRP CG CD1 doub Y N 321 TRP CG CD2 sing Y N 322 TRP CD1 NE1 sing Y N 323 TRP CD1 HD1 sing N N 324 TRP CD2 CE2 doub Y N 325 TRP CD2 CE3 sing Y N 326 TRP NE1 CE2 sing Y N 327 TRP NE1 HE1 sing N N 328 TRP CE2 CZ2 sing Y N 329 TRP CE3 CZ3 doub Y N 330 TRP CE3 HE3 sing N N 331 TRP CZ2 CH2 doub Y N 332 TRP CZ2 HZ2 sing N N 333 TRP CZ3 CH2 sing Y N 334 TRP CZ3 HZ3 sing N N 335 TRP CH2 HH2 sing N N 336 TRP OXT HXT sing N N 337 TYR N CA sing N N 338 TYR N H sing N N 339 TYR N H2 sing N N 340 TYR CA C sing N N 341 TYR CA CB sing N N 342 TYR CA HA sing N N 343 TYR C O doub N N 344 TYR C OXT sing N N 345 TYR CB CG sing N N 346 TYR CB HB2 sing N N 347 TYR CB HB3 sing N N 348 TYR CG CD1 doub Y N 349 TYR CG CD2 sing Y N 350 TYR CD1 CE1 sing Y N 351 TYR CD1 HD1 sing N N 352 TYR CD2 CE2 doub Y N 353 TYR CD2 HD2 sing N N 354 TYR CE1 CZ doub Y N 355 TYR CE1 HE1 sing N N 356 TYR CE2 CZ sing Y N 357 TYR CE2 HE2 sing N N 358 TYR CZ OH sing N N 359 TYR OH HH sing N N 360 TYR OXT HXT sing N N 361 VAL N CA sing N N 362 VAL N H sing N N 363 VAL N H2 sing N N 364 VAL CA C sing N N 365 VAL CA CB sing N N 366 VAL CA HA sing N N 367 VAL C O doub N N 368 VAL C OXT sing N N 369 VAL CB CG1 sing N N 370 VAL CB CG2 sing N N 371 VAL CB HB sing N N 372 VAL CG1 HG11 sing N N 373 VAL CG1 HG12 sing N N 374 VAL CG1 HG13 sing N N 375 VAL CG2 HG21 sing N N 376 VAL CG2 HG22 sing N N 377 VAL CG2 HG23 sing N N 378 VAL OXT HXT sing N N 379 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'SULFATE ION' SO4 3 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 2JKK _pdbx_initial_refinement_model.details 'PDB ENTRY 2JKK' #