HEADER TRANSFERASE 03-NOV-14 4D58 TITLE FOCAL ADHESION KINASE CATALYTIC DOMAIN IN COMPLEX WITH BIS-ANILINO TITLE 2 PYRIMIDINE INHIBITOR COMPND MOL_ID: 1; COMPND 2 MOLECULE: FOCAL ADHESION KINASE; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: KINASE DOMAIN, RESIDUES 411-686; COMPND 5 SYNONYM: FADK 1, FOCAL ADHESION KINASE-RELATED NONKINASE, FRNK, P41/ COMPND 6 P43FRNK, PROTEIN-TYROSINE KINASE 2, P125FAK, PP125FAK; COMPND 7 EC: 2.7.10.2; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: GALLUS GALLUS; SOURCE 3 ORGANISM_COMMON: CHICKEN; SOURCE 4 ORGANISM_TAXID: 9031; SOURCE 5 EXPRESSION_SYSTEM: TRICHOPLUSIA NI; SOURCE 6 EXPRESSION_SYSTEM_COMMON: CABBAGE LOOPER; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7111; SOURCE 8 EXPRESSION_SYSTEM_CELL_LINE: HIGH FIVE; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: BACULOVIRUS; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PACG2T KEYWDS TRANSFERASE, KINASE INHIBITOR, ATP-BINDING, INTEGRIN SIGNALING EXPDTA X-RAY DIFFRACTION AUTHOR J.LE COQ,A.LIN,D.LIETHA REVDAT 3 20-DEC-23 4D58 1 REMARK REVDAT 2 03-APR-19 4D58 1 SOURCE REVDAT 1 18-FEB-15 4D58 0 JRNL AUTH J.ZHOU,A.BRONOWSKA,J.LE COQ,D.LIETHA,F.GRATER JRNL TITL ALLOSTERIC REGULATION OF FOCAL ADHESION KINASE BY PIP2 AND JRNL TITL 2 ATP. JRNL REF BIOPHYS.J. V. 108 698 2015 JRNL REFN ISSN 0006-3495 JRNL PMID 25650936 JRNL DOI 10.1016/J.BPJ.2014.11.3454 REMARK 2 REMARK 2 RESOLUTION. 1.95 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.7.0029 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.95 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 61.68 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 38091 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.197 REMARK 3 R VALUE (WORKING SET) : 0.196 REMARK 3 FREE R VALUE : 0.228 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 2030 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.95 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.00 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2767 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.79 REMARK 3 BIN R VALUE (WORKING SET) : 0.2710 REMARK 3 BIN FREE R VALUE SET COUNT : 136 REMARK 3 BIN FREE R VALUE : 0.2880 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4153 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 48 REMARK 3 SOLVENT ATOMS : 185 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 34.86 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.05000 REMARK 3 B22 (A**2) : 0.71000 REMARK 3 B33 (A**2) : -0.72000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.83000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.180 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.154 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.107 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 7.400 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.951 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.937 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4311 ; 0.009 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 4161 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5834 ; 1.267 ; 1.978 REMARK 3 BOND ANGLES OTHERS (DEGREES): 9574 ; 0.817 ; 3.002 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 518 ; 5.201 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 192 ;33.238 ;23.281 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 775 ;13.354 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 35 ;21.307 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 641 ; 0.072 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4765 ; 0.005 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 994 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 414 A 503 REMARK 3 ORIGIN FOR THE GROUP (A): 31.5128 33.9577 16.7262 REMARK 3 T TENSOR REMARK 3 T11: 0.0382 T22: 0.0235 REMARK 3 T33: 0.1015 T12: -0.0092 REMARK 3 T13: 0.0227 T23: -0.0386 REMARK 3 L TENSOR REMARK 3 L11: 1.1925 L22: 1.3330 REMARK 3 L33: 2.5765 L12: -0.7291 REMARK 3 L13: 0.1571 L23: -0.6473 REMARK 3 S TENSOR REMARK 3 S11: -0.1208 S12: 0.0690 S13: 0.0208 REMARK 3 S21: 0.1288 S22: 0.0356 S23: -0.1569 REMARK 3 S31: 0.0782 S32: 0.0496 S33: 0.0852 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 504 A 684 REMARK 3 ORIGIN FOR THE GROUP (A): 14.0338 39.4404 -1.8640 REMARK 3 T TENSOR REMARK 3 T11: 0.0197 T22: 0.0333 REMARK 3 T33: 0.0748 T12: -0.0239 REMARK 3 T13: 0.0161 T23: -0.0278 REMARK 3 L TENSOR REMARK 3 L11: 1.1969 L22: 0.9156 REMARK 3 L33: 1.4652 L12: 0.3124 REMARK 3 L13: 0.0672 L23: -0.4463 REMARK 3 S TENSOR REMARK 3 S11: -0.0532 S12: 0.1172 S13: -0.0804 REMARK 3 S21: -0.0594 S22: 0.0498 S23: 0.0411 REMARK 3 S31: 0.1464 S32: -0.1469 S33: 0.0035 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 415 B 503 REMARK 3 ORIGIN FOR THE GROUP (A): 26.0741 5.7893 32.7172 REMARK 3 T TENSOR REMARK 3 T11: 0.1101 T22: 0.1436 REMARK 3 T33: 0.0936 T12: -0.0571 REMARK 3 T13: -0.0312 T23: -0.0426 REMARK 3 L TENSOR REMARK 3 L11: 0.6602 L22: 1.5737 REMARK 3 L33: 3.4627 L12: -0.4804 REMARK 3 L13: -0.6071 L23: -0.6879 REMARK 3 S TENSOR REMARK 3 S11: -0.0643 S12: -0.1080 S13: 0.0860 REMARK 3 S21: 0.2672 S22: 0.0839 S23: -0.2362 REMARK 3 S31: -0.2134 S32: 0.4838 S33: -0.0196 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 504 B 685 REMARK 3 ORIGIN FOR THE GROUP (A): 10.3251 4.1883 12.5668 REMARK 3 T TENSOR REMARK 3 T11: 0.0400 T22: 0.0326 REMARK 3 T33: 0.0725 T12: -0.0004 REMARK 3 T13: 0.0377 T23: 0.0023 REMARK 3 L TENSOR REMARK 3 L11: 1.1064 L22: 1.3519 REMARK 3 L33: 2.0084 L12: -0.2008 REMARK 3 L13: 0.3822 L23: 0.1249 REMARK 3 S TENSOR REMARK 3 S11: 0.0383 S12: -0.1215 S13: -0.0152 REMARK 3 S21: 0.0319 S22: 0.0410 S23: 0.1057 REMARK 3 S31: -0.1848 S32: -0.1569 S33: -0.0794 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. VALUES WITH TLS ADDED REMARK 4 REMARK 4 4D58 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 03-NOV-14. REMARK 100 THE DEPOSITION ID IS D_1290062077. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 13-AUG-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00004 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 40150 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.950 REMARK 200 RESOLUTION RANGE LOW (A) : 61.680 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 3.800 REMARK 200 R MERGE (I) : 0.04000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.95 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.06 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 3.70 REMARK 200 R MERGE FOR SHELL (I) : 0.32000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 2JKK REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.59 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.22 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM TRIS PH 8.5, 75 MM LISO4, 22% REMARK 280 PEG4000, 10 MM TCEP REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 61.68400 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 411 REMARK 465 THR A 412 REMARK 465 ARG A 413 REMARK 465 GLY A 566 REMARK 465 LEU A 567 REMARK 465 SER A 568 REMARK 465 ARG A 569 REMARK 465 TYR A 570 REMARK 465 MET A 571 REMARK 465 GLU A 572 REMARK 465 ASP A 573 REMARK 465 SER A 574 REMARK 465 THR A 575 REMARK 465 TYR A 576 REMARK 465 TYR A 577 REMARK 465 LYS A 578 REMARK 465 ALA A 579 REMARK 465 SER A 580 REMARK 465 LYS A 581 REMARK 465 GLY A 582 REMARK 465 LYS A 583 REMARK 465 SER B 411 REMARK 465 THR B 412 REMARK 465 ARG B 413 REMARK 465 GLU B 572 REMARK 465 ASP B 573 REMARK 465 SER B 574 REMARK 465 THR B 575 REMARK 465 TYR B 576 REMARK 465 TYR B 577 REMARK 465 LYS B 578 REMARK 465 ALA B 579 REMARK 465 SER B 580 REMARK 465 LYS B 581 REMARK 465 GLY B 582 REMARK 465 LYS B 583 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 446 111.54 -162.02 REMARK 500 ARG A 545 -10.56 82.65 REMARK 500 ASP A 546 54.98 -146.35 REMARK 500 GLU B 445 -67.33 59.34 REMARK 500 ARG B 545 -10.05 80.81 REMARK 500 ASP B 546 56.17 -147.94 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 1687 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 1688 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 1689 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BI9 B 1690 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4D4R RELATED DB: PDB REMARK 900 FOCAL ADHESION KINASE CATALYTIC DOMAIN REMARK 900 RELATED ID: 4D4S RELATED DB: PDB REMARK 900 FOCAL ADHESION KINASE CATALYTIC DOMAIN REMARK 900 RELATED ID: 4D4V RELATED DB: PDB REMARK 900 FOCAL ADHESION KINASE CATALYTIC DOMAIN REMARK 900 RELATED ID: 4D4Y RELATED DB: PDB REMARK 900 FOCAL ADHESION KINASE CATALYTIC DOMAIN REMARK 900 RELATED ID: 4D55 RELATED DB: PDB REMARK 900 FOCAL ADHESION KINASE CATALYTIC DOMAIN REMARK 900 RELATED ID: 4D5H RELATED DB: PDB REMARK 900 FOCAL ADHESION KINASE CATALYTIC DOMAIN REMARK 900 RELATED ID: 4D5K RELATED DB: PDB REMARK 900 FOCAL ADHESION KINASE CATALYTIC DOMAIN DBREF 4D58 A 411 686 UNP Q00944 FAK1_CHICK 411 686 DBREF 4D58 B 411 686 UNP Q00944 FAK1_CHICK 411 686 SEQRES 1 A 276 SER THR ARG ASP TYR GLU ILE GLN ARG GLU ARG ILE GLU SEQRES 2 A 276 LEU GLY ARG CYS ILE GLY GLU GLY GLN PHE GLY ASP VAL SEQRES 3 A 276 HIS GLN GLY ILE TYR MET SER PRO GLU ASN PRO ALA MET SEQRES 4 A 276 ALA VAL ALA ILE LYS THR CYS LYS ASN CYS THR SER ASP SEQRES 5 A 276 SER VAL ARG GLU LYS PHE LEU GLN GLU ALA LEU THR MET SEQRES 6 A 276 ARG GLN PHE ASP HIS PRO HIS ILE VAL LYS LEU ILE GLY SEQRES 7 A 276 VAL ILE THR GLU ASN PRO VAL TRP ILE ILE MET GLU LEU SEQRES 8 A 276 CYS THR LEU GLY GLU LEU ARG SER PHE LEU GLN VAL ARG SEQRES 9 A 276 LYS PHE SER LEU ASP LEU ALA SER LEU ILE LEU TYR ALA SEQRES 10 A 276 TYR GLN LEU SER THR ALA LEU ALA TYR LEU GLU SER LYS SEQRES 11 A 276 ARG PHE VAL HIS ARG ASP ILE ALA ALA ARG ASN VAL LEU SEQRES 12 A 276 VAL SER ALA THR ASP CYS VAL LYS LEU GLY ASP PHE GLY SEQRES 13 A 276 LEU SER ARG TYR MET GLU ASP SER THR TYR TYR LYS ALA SEQRES 14 A 276 SER LYS GLY LYS LEU PRO ILE LYS TRP MET ALA PRO GLU SEQRES 15 A 276 SER ILE ASN PHE ARG ARG PHE THR SER ALA SER ASP VAL SEQRES 16 A 276 TRP MET PHE GLY VAL CYS MET TRP GLU ILE LEU MET HIS SEQRES 17 A 276 GLY VAL LYS PRO PHE GLN GLY VAL LYS ASN ASN ASP VAL SEQRES 18 A 276 ILE GLY ARG ILE GLU ASN GLY GLU ARG LEU PRO MET PRO SEQRES 19 A 276 PRO ASN CYS PRO PRO THR LEU TYR SER LEU MET THR LYS SEQRES 20 A 276 CYS TRP ALA TYR ASP PRO SER ARG ARG PRO ARG PHE THR SEQRES 21 A 276 GLU LEU LYS ALA GLN LEU SER THR ILE LEU GLU GLU GLU SEQRES 22 A 276 LYS LEU GLN SEQRES 1 B 276 SER THR ARG ASP TYR GLU ILE GLN ARG GLU ARG ILE GLU SEQRES 2 B 276 LEU GLY ARG CYS ILE GLY GLU GLY GLN PHE GLY ASP VAL SEQRES 3 B 276 HIS GLN GLY ILE TYR MET SER PRO GLU ASN PRO ALA MET SEQRES 4 B 276 ALA VAL ALA ILE LYS THR CYS LYS ASN CYS THR SER ASP SEQRES 5 B 276 SER VAL ARG GLU LYS PHE LEU GLN GLU ALA LEU THR MET SEQRES 6 B 276 ARG GLN PHE ASP HIS PRO HIS ILE VAL LYS LEU ILE GLY SEQRES 7 B 276 VAL ILE THR GLU ASN PRO VAL TRP ILE ILE MET GLU LEU SEQRES 8 B 276 CYS THR LEU GLY GLU LEU ARG SER PHE LEU GLN VAL ARG SEQRES 9 B 276 LYS PHE SER LEU ASP LEU ALA SER LEU ILE LEU TYR ALA SEQRES 10 B 276 TYR GLN LEU SER THR ALA LEU ALA TYR LEU GLU SER LYS SEQRES 11 B 276 ARG PHE VAL HIS ARG ASP ILE ALA ALA ARG ASN VAL LEU SEQRES 12 B 276 VAL SER ALA THR ASP CYS VAL LYS LEU GLY ASP PHE GLY SEQRES 13 B 276 LEU SER ARG TYR MET GLU ASP SER THR TYR TYR LYS ALA SEQRES 14 B 276 SER LYS GLY LYS LEU PRO ILE LYS TRP MET ALA PRO GLU SEQRES 15 B 276 SER ILE ASN PHE ARG ARG PHE THR SER ALA SER ASP VAL SEQRES 16 B 276 TRP MET PHE GLY VAL CYS MET TRP GLU ILE LEU MET HIS SEQRES 17 B 276 GLY VAL LYS PRO PHE GLN GLY VAL LYS ASN ASN ASP VAL SEQRES 18 B 276 ILE GLY ARG ILE GLU ASN GLY GLU ARG LEU PRO MET PRO SEQRES 19 B 276 PRO ASN CYS PRO PRO THR LEU TYR SER LEU MET THR LYS SEQRES 20 B 276 CYS TRP ALA TYR ASP PRO SER ARG ARG PRO ARG PHE THR SEQRES 21 B 276 GLU LEU LYS ALA GLN LEU SER THR ILE LEU GLU GLU GLU SEQRES 22 B 276 LYS LEU GLN HET SO4 B1687 5 HET SO4 B1688 5 HET SO4 B1689 5 HET BI9 B1690 33 HETNAM SO4 SULFATE ION HETNAM BI9 2-({5-CHLORO-2-[(2-METHOXY-4-MORPHOLIN-4-YLPHENYL) HETNAM 2 BI9 AMINO]PYRIMIDIN-4-YL}AMINO)-N-METHYLBENZAMIDE FORMUL 3 SO4 3(O4 S 2-) FORMUL 6 BI9 C23 H25 CL N6 O3 FORMUL 7 HOH *185(H2 O) HELIX 1 1 GLN A 418 GLU A 420 5 3 HELIX 2 2 SER A 461 GLN A 477 1 17 HELIX 3 3 GLU A 506 ARG A 514 1 9 HELIX 4 4 ASP A 519 LYS A 540 1 22 HELIX 5 5 ALA A 548 ARG A 550 5 3 HELIX 6 6 PRO A 585 MET A 589 5 5 HELIX 7 7 ALA A 590 ARG A 597 1 8 HELIX 8 8 THR A 600 MET A 617 1 18 HELIX 9 9 LYS A 627 ASN A 629 5 3 HELIX 10 10 ASP A 630 ASN A 637 1 8 HELIX 11 11 PRO A 648 TRP A 659 1 12 HELIX 12 12 ASP A 662 ARG A 666 5 5 HELIX 13 13 ARG A 668 GLN A 686 1 19 HELIX 14 14 GLN B 418 GLU B 420 5 3 HELIX 15 15 SER B 461 GLN B 477 1 17 HELIX 16 16 LEU B 507 ARG B 514 1 8 HELIX 17 17 LYS B 515 LEU B 518 5 4 HELIX 18 18 ASP B 519 LYS B 540 1 22 HELIX 19 19 ALA B 548 ARG B 550 5 3 HELIX 20 20 GLY B 566 TYR B 570 5 5 HELIX 21 21 PRO B 585 MET B 589 5 5 HELIX 22 22 ALA B 590 ARG B 597 1 8 HELIX 23 23 THR B 600 MET B 617 1 18 HELIX 24 24 LYS B 627 ASN B 629 5 3 HELIX 25 25 ASP B 630 ASN B 637 1 8 HELIX 26 26 PRO B 648 TRP B 659 1 12 HELIX 27 27 ASP B 662 ARG B 666 5 5 HELIX 28 28 ARG B 668 LEU B 685 1 18 SHEET 1 AA 5 ILE A 422 GLY A 429 0 SHEET 2 AA 5 VAL A 436 TYR A 441 -1 O VAL A 436 N ILE A 428 SHEET 3 AA 5 MET A 449 THR A 455 -1 O MET A 449 N TYR A 441 SHEET 4 AA 5 TRP A 496 GLU A 500 -1 O ILE A 497 N LYS A 454 SHEET 5 AA 5 LEU A 486 ILE A 490 -1 N ILE A 487 O ILE A 498 SHEET 1 AB 2 VAL A 552 ALA A 556 0 SHEET 2 AB 2 CYS A 559 LEU A 562 -1 O CYS A 559 N SER A 555 SHEET 1 BA 5 ILE B 422 GLY B 429 0 SHEET 2 BA 5 GLY B 434 MET B 442 -1 O VAL B 436 N ILE B 428 SHEET 3 BA 5 ALA B 448 CYS B 456 -1 O MET B 449 N TYR B 441 SHEET 4 BA 5 TRP B 496 GLU B 500 -1 O ILE B 497 N LYS B 454 SHEET 5 BA 5 LEU B 486 ILE B 490 -1 N ILE B 487 O ILE B 498 SHEET 1 BB 3 GLY B 505 GLU B 506 0 SHEET 2 BB 3 VAL B 552 ALA B 556 -1 N VAL B 554 O GLY B 505 SHEET 3 BB 3 CYS B 559 LEU B 562 -1 O CYS B 559 N SER B 555 CISPEP 1 ASN A 493 PRO A 494 0 -3.83 CISPEP 2 ASN B 493 PRO B 494 0 0.73 SITE 1 AC1 5 LYS A 621 ASP B 519 LEU B 520 HOH B2031 SITE 2 AC1 5 HOH B2090 SITE 1 AC2 3 ARG B 508 GLN B 512 LYS B 621 SITE 1 AC3 5 SER B 601 ARG B 668 HOH B2042 HOH B2057 SITE 2 AC3 5 HOH B2091 SITE 1 AC4 15 ILE B 428 VAL B 436 GLN B 438 ALA B 452 SITE 2 AC4 15 LYS B 454 MET B 499 GLU B 500 LEU B 501 SITE 3 AC4 15 CYS B 502 THR B 503 GLY B 505 GLU B 506 SITE 4 AC4 15 LEU B 553 GLY B 563 HOH B2048 CRYST1 44.983 123.368 50.843 90.00 94.65 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.022231 0.000000 0.001808 0.00000 SCALE2 0.000000 0.008106 0.000000 0.00000 SCALE3 0.000000 0.000000 0.019733 0.00000