HEADER HYDROLASE/DNA 13-NOV-14 4D6N TITLE THE CRYSTAL STRUCTURE OF I-DMOI IN COMPLEX WITH ITS TARGET DNA AT 10 TITLE 2 DAYS INCUBATION IN 5MM MG (STATE 7) COMPND MOL_ID: 1; COMPND 2 MOLECULE: HOMING ENDONUCLEASE I-DMOI; COMPND 3 CHAIN: A, F, K; COMPND 4 SYNONYM: I-DMOI; COMPND 5 EC: 3.1.-.-; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: 5'-D(*DGP*CP*CP*TP*TP*GP*CP*CP*GP*GP*GP*TP*AP*DAP)-3'; COMPND 9 CHAIN: B, G, L; COMPND 10 SYNONYM: 14MER; COMPND 11 ENGINEERED: YES; COMPND 12 MOL_ID: 3; COMPND 13 MOLECULE: 5'-D(*DGP*TP*TP*CP*CP*GP*GP*CP*GP*CP*GP)-3'; COMPND 14 CHAIN: C, H, M; COMPND 15 SYNONYM: 11MER; COMPND 16 ENGINEERED: YES; COMPND 17 MOL_ID: 4; COMPND 18 MOLECULE: 5'-D(*DCP*GP*CP*GP*CP*CP*GP*GP*AP*AP*CP*TP*TP*DAP*C)-3'; COMPND 19 CHAIN: D, I, N; COMPND 20 SYNONYM: 15MER; COMPND 21 ENGINEERED: YES; COMPND 22 MOL_ID: 5; COMPND 23 MOLECULE: 5'-D(*DCP*CP*GP*GP*CP*AP*AP*GP*GP*CP)-3'; COMPND 24 CHAIN: E, J, O; COMPND 25 SYNONYM: 10MER; COMPND 26 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: DESULFUROCOCCUS MOBILIS; SOURCE 3 ORGANISM_TAXID: 2274; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_VARIANT: ROSETTA PLYSS; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_VECTOR: PET24D; SOURCE 10 MOL_ID: 2; SOURCE 11 SYNTHETIC: YES; SOURCE 12 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 13 ORGANISM_TAXID: 32630; SOURCE 14 MOL_ID: 3; SOURCE 15 SYNTHETIC: YES; SOURCE 16 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 17 ORGANISM_TAXID: 32630; SOURCE 18 MOL_ID: 4; SOURCE 19 SYNTHETIC: YES; SOURCE 20 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 21 ORGANISM_TAXID: 32630; SOURCE 22 MOL_ID: 5; SOURCE 23 SYNTHETIC: YES; SOURCE 24 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 25 ORGANISM_TAXID: 32630 KEYWDS HYDROLASE-DNA COMPLEX, CATALYSIS, PROTEIN-DNA INTERACTION EXPDTA X-RAY DIFFRACTION AUTHOR R.MOLINA,S.STELLA,P.REDONDO,H.GOMEZ,M.J.MARCAIDA,M.OROZCO,J.PRIETO, AUTHOR 2 G.MONTOYA REVDAT 4 20-DEC-23 4D6N 1 REMARK LINK REVDAT 3 23-AUG-17 4D6N 1 REMARK REVDAT 2 21-JAN-15 4D6N 1 JRNL REVDAT 1 17-DEC-14 4D6N 0 JRNL AUTH R.MOLINA,S.STELLA,P.REDONDO,H.GOMEZ,M.J.MARCAIDA,M.OROZCO, JRNL AUTH 2 J.PRIETO,G.MONTOYA JRNL TITL VISUALIZING PHOSPHODIESTER-BOND HYDROLYSIS BY AN JRNL TITL 2 ENDONUCLEASE. JRNL REF NAT.STRUCT.MOL.BIOL. V. 22 65 2015 JRNL REFN ISSN 1545-9993 JRNL PMID 25486305 JRNL DOI 10.1038/NSMB.2932 REMARK 2 REMARK 2 RESOLUTION. 2.35 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.35 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.60 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.070 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.8 REMARK 3 NUMBER OF REFLECTIONS : 56723 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.184 REMARK 3 R VALUE (WORKING SET) : 0.182 REMARK 3 FREE R VALUE : 0.217 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.500 REMARK 3 FREE R VALUE TEST SET COUNT : 3928 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 46.6071 - 7.1278 0.99 3800 135 0.1295 0.1586 REMARK 3 2 7.1278 - 5.6607 1.00 3874 150 0.1521 0.1908 REMARK 3 3 5.6607 - 4.9461 0.97 3745 141 0.1598 0.2020 REMARK 3 4 4.9461 - 4.4942 1.00 3887 154 0.1547 0.1862 REMARK 3 5 4.4942 - 4.1723 1.00 3841 140 0.1491 0.1875 REMARK 3 6 4.1723 - 3.9265 1.00 3840 135 0.1632 0.2042 REMARK 3 7 3.9265 - 3.7299 1.00 3902 138 0.1774 0.1693 REMARK 3 8 3.7299 - 3.5676 0.97 3736 130 0.1950 0.2073 REMARK 3 9 3.5676 - 3.4303 0.99 3839 142 0.1767 0.1950 REMARK 3 10 3.4303 - 3.3120 0.99 3846 142 0.1911 0.2243 REMARK 3 11 3.3120 - 3.2084 0.99 3803 146 0.1846 0.2214 REMARK 3 12 3.2084 - 3.1167 0.99 3841 144 0.2053 0.2142 REMARK 3 13 3.1167 - 3.0347 0.99 3793 131 0.2054 0.2266 REMARK 3 14 3.0347 - 2.9607 0.99 3885 150 0.2159 0.2657 REMARK 3 15 2.9607 - 2.8934 0.99 3796 154 0.2239 0.2810 REMARK 3 16 2.8934 - 2.8318 0.99 3855 127 0.2296 0.3031 REMARK 3 17 2.8318 - 2.7752 0.96 3783 145 0.2405 0.2866 REMARK 3 18 2.7752 - 2.7228 0.99 3702 140 0.2390 0.3389 REMARK 3 19 2.7228 - 2.6742 0.99 3892 126 0.2275 0.2510 REMARK 3 20 2.6742 - 2.6289 0.99 3807 150 0.2300 0.2711 REMARK 3 21 2.6289 - 2.5865 0.99 3851 142 0.2307 0.2592 REMARK 3 22 2.5865 - 2.5467 0.99 3790 150 0.2273 0.2930 REMARK 3 23 2.5467 - 2.5092 0.99 3795 138 0.2388 0.3150 REMARK 3 24 2.5092 - 2.4739 0.99 3892 128 0.2506 0.2981 REMARK 3 25 2.4739 - 2.4405 0.99 3795 137 0.2638 0.2921 REMARK 3 26 2.4405 - 2.4088 0.98 3800 135 0.2733 0.3509 REMARK 3 27 2.4088 - 2.3787 0.99 3842 144 0.2753 0.3379 REMARK 3 28 2.3787 - 2.3500 0.98 3803 134 0.2839 0.3442 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.270 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 26.050 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 49.85 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 8101 REMARK 3 ANGLE : 1.228 11570 REMARK 3 CHIRALITY : 0.060 1302 REMARK 3 PLANARITY : 0.007 934 REMARK 3 DIHEDRAL : 24.331 3245 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4D6N COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 13-NOV-14. REMARK 100 THE DEPOSITION ID IS D_1290062304. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.98 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 56760 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.350 REMARK 200 RESOLUTION RANGE LOW (A) : 46.600 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.8 REMARK 200 DATA REDUNDANCY : 3.900 REMARK 200 R MERGE (I) : 0.07000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.35 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.48 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.7 REMARK 200 DATA REDUNDANCY IN SHELL : 4.00 REMARK 200 R MERGE FOR SHELL (I) : 0.46000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 2VS8 REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.62 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PH 5.5 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 35.13450 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: PENTAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: PENTAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8160 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13920 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -59.5 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: K, L, M, N, O REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: PENTAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: PENTAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8520 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 14170 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -62.5 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: F, G, H, I, J REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: PENTAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: PENTAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8510 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 14170 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -62.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 1 REMARK 465 HIS A 2 REMARK 465 ASN A 3 REMARK 465 ASN A 4 REMARK 465 GLU A 188 REMARK 465 ALA A 189 REMARK 465 ALA A 190 REMARK 465 ALA A 191 REMARK 465 LEU A 192 REMARK 465 GLU A 193 REMARK 465 HIS A 194 REMARK 465 HIS A 195 REMARK 465 HIS A 196 REMARK 465 HIS A 197 REMARK 465 HIS A 198 REMARK 465 HIS A 199 REMARK 465 ALA F 1 REMARK 465 HIS F 2 REMARK 465 ASN F 3 REMARK 465 ASN F 4 REMARK 465 HIS F 196 REMARK 465 HIS F 197 REMARK 465 HIS F 198 REMARK 465 HIS F 199 REMARK 465 ALA K 1 REMARK 465 HIS K 2 REMARK 465 ASN K 3 REMARK 465 ASN K 4 REMARK 465 GLU K 5 REMARK 465 ASN K 183 REMARK 465 PRO K 184 REMARK 465 LEU K 185 REMARK 465 PRO K 186 REMARK 465 PRO K 187 REMARK 465 GLU K 188 REMARK 465 ALA K 189 REMARK 465 ALA K 190 REMARK 465 ALA K 191 REMARK 465 LEU K 192 REMARK 465 GLU K 193 REMARK 465 HIS K 194 REMARK 465 HIS K 195 REMARK 465 HIS K 196 REMARK 465 HIS K 197 REMARK 465 HIS K 198 REMARK 465 HIS K 199 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 5 CG CD OE1 OE2 REMARK 470 LYS A 66 CG CD CE NZ REMARK 470 GLU K 96 CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 2036 O HOH A 2037 1.77 REMARK 500 O HOH B 2003 O HOH E 2001 1.87 REMARK 500 NZ LYS F 120 OP3 DC J 16 1.97 REMARK 500 NZ LYS K 30 OP2 DG M 20 2.03 REMARK 500 OD1 ASP K 21 O HOH K 2004 2.06 REMARK 500 O HOH A 2051 O HOH B 2004 2.08 REMARK 500 NZ LYS A 30 OP2 DG C 20 2.08 REMARK 500 O HOH C 2006 O HOH D 2002 2.13 REMARK 500 NZ LYS K 43 OP2 DA L 13 2.16 REMARK 500 OP1 DG M 15 O HOH K 2031 2.16 REMARK 500 NH1 ARG K 104 O LEU K 182 2.17 REMARK 500 NH2 ARG A 104 O HOH A 2040 2.17 REMARK 500 O HOH K 2011 O HOH K 2019 2.18 REMARK 500 OP1 DG L 6 O HOH L 2002 2.18 REMARK 500 NZ LYS F 30 OP2 DG H 20 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 DG C 15 P DG C 15 OP3 -0.121 REMARK 500 DC E 16 P DC E 16 OP3 -0.117 REMARK 500 DC E 16 O3' DC E 16 C3' -0.040 REMARK 500 DG H 15 P DG H 15 OP3 -0.128 REMARK 500 DA I 14 P DA I 14 O5' 0.072 REMARK 500 DC J 16 P DC J 16 OP3 -0.123 REMARK 500 DC L 2 O3' DC L 2 C3' -0.037 REMARK 500 DG M 15 P DG M 15 OP3 -0.123 REMARK 500 DG N 4 O3' DG N 4 C3' -0.047 REMARK 500 DC N 5 O3' DC N 5 C3' -0.048 REMARK 500 DC O 16 P DC O 16 OP3 -0.109 REMARK 500 DC O 16 O3' DC O 16 C3' -0.037 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 GLY A 31 N - CA - C ANGL. DEV. = -25.1 DEGREES REMARK 500 DG C 21 O4' - C1' - N9 ANGL. DEV. = 2.0 DEGREES REMARK 500 DC C 24 O4' - C1' - N1 ANGL. DEV. = 3.3 DEGREES REMARK 500 DG D 8 O4' - C1' - N9 ANGL. DEV. = 1.9 DEGREES REMARK 500 DA D 9 O4' - C1' - N9 ANGL. DEV. = 2.3 DEGREES REMARK 500 DG E 18 O4' - C1' - N9 ANGL. DEV. = 3.0 DEGREES REMARK 500 DA E 21 O4' - C1' - N9 ANGL. DEV. = 2.0 DEGREES REMARK 500 ARG F 77 NE - CZ - NH2 ANGL. DEV. = 3.4 DEGREES REMARK 500 DC G 2 O4' - C1' - N1 ANGL. DEV. = 2.6 DEGREES REMARK 500 DG G 11 O4' - C1' - N9 ANGL. DEV. = 2.5 DEGREES REMARK 500 DC H 19 O4' - C1' - N1 ANGL. DEV. = 1.9 DEGREES REMARK 500 DG H 21 O4' - C1' - N9 ANGL. DEV. = 1.8 DEGREES REMARK 500 DC H 24 O4' - C1' - N1 ANGL. DEV. = 1.9 DEGREES REMARK 500 DA I 9 O4' - C1' - N9 ANGL. DEV. = 3.1 DEGREES REMARK 500 DA I 14 O3' - P - OP2 ANGL. DEV. = 7.1 DEGREES REMARK 500 DA I 14 O3' - P - OP1 ANGL. DEV. = 8.0 DEGREES REMARK 500 DA I 14 O5' - P - OP1 ANGL. DEV. = -8.8 DEGREES REMARK 500 DA I 14 O5' - P - OP2 ANGL. DEV. = -12.1 DEGREES REMARK 500 DA I 14 C3' - C2' - C1' ANGL. DEV. = -5.2 DEGREES REMARK 500 DC J 16 O4' - C1' - N1 ANGL. DEV. = 2.2 DEGREES REMARK 500 DG J 18 O4' - C1' - N9 ANGL. DEV. = 2.1 DEGREES REMARK 500 GLY K 31 N - CA - C ANGL. DEV. = -15.4 DEGREES REMARK 500 DG M 21 O4' - C1' - N9 ANGL. DEV. = 2.5 DEGREES REMARK 500 DC M 24 O4' - C1' - N1 ANGL. DEV. = 2.7 DEGREES REMARK 500 DA N 9 O4' - C1' - N9 ANGL. DEV. = 2.9 DEGREES REMARK 500 DC O 16 O4' - C1' - N1 ANGL. DEV. = 1.9 DEGREES REMARK 500 DG O 18 O4' - C1' - N9 ANGL. DEV. = 3.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 32 49.92 -105.01 REMARK 500 LEU A 47 -58.84 63.71 REMARK 500 HIS A 51 -59.43 -146.98 REMARK 500 ARG A 77 143.20 -172.41 REMARK 500 SER A 84 116.93 -163.06 REMARK 500 GLU A 117 35.24 -144.29 REMARK 500 LEU A 122 3.44 56.15 REMARK 500 ASN A 129 144.09 -174.03 REMARK 500 ILE A 177 -69.07 -98.84 REMARK 500 GLN F 42 139.96 -170.54 REMARK 500 LEU F 122 11.43 49.24 REMARK 500 ASN F 129 146.61 -170.51 REMARK 500 ASN F 183 140.30 -175.08 REMARK 500 VAL K 7 -48.69 72.01 REMARK 500 ARG K 77 145.18 -172.32 REMARK 500 SER K 84 110.77 -165.75 REMARK 500 LEU K 122 8.99 49.90 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 LYS A 30 GLY A 31 -50.66 REMARK 500 LEU F 182 ASN F 183 -137.71 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH O2002 DISTANCE = 8.53 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A1188 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLY A 20 O REMARK 620 2 GLU A 117 OE1 87.0 REMARK 620 3 GLU A 117 OE2 100.5 50.8 REMARK 620 4 HOH A2007 O 104.1 138.3 87.5 REMARK 620 5 DG C 15 OP3 76.8 80.8 131.5 140.6 REMARK 620 6 DG C 15 OP1 83.0 137.1 171.8 84.5 56.3 REMARK 620 7 DC D 15 OP1 170.1 91.5 86.0 83.4 93.3 91.5 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A1189 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 21 OD2 REMARK 620 2 ALA A 116 O 83.6 REMARK 620 3 HOH A2009 O 90.6 88.8 REMARK 620 4 DA B 14 OP1 93.8 170.1 100.7 REMARK 620 5 DC E 16 OP1 167.9 85.3 84.5 98.0 REMARK 620 6 DC E 16 OP3 122.9 79.9 142.6 93.7 59.3 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG F1197 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLY F 20 O REMARK 620 2 GLU F 117 OE2 86.8 REMARK 620 3 HOH F2001 O 120.1 88.9 REMARK 620 4 DG H 15 OP3 80.3 98.6 158.8 REMARK 620 5 DG H 15 OP2 107.1 154.8 101.3 64.5 REMARK 620 6 DC I 15 OP1 150.6 72.4 80.9 82.5 86.4 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG F1196 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP F 21 OD2 REMARK 620 2 ALA F 116 O 87.4 REMARK 620 3 HOH F2003 O 82.6 91.3 REMARK 620 4 DA G 14 OP1 87.8 175.0 86.9 REMARK 620 5 DC J 16 OP3 175.2 90.1 93.5 94.7 REMARK 620 6 DC J 16 OP2 117.1 80.3 157.8 103.1 66.3 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG K1183 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLY K 20 O REMARK 620 2 GLU K 117 OE2 94.1 REMARK 620 3 GLU K 117 OE1 81.3 49.0 REMARK 620 4 HOH K2003 O 117.7 88.5 136.0 REMARK 620 5 DG M 15 OP3 74.0 111.8 62.9 156.5 REMARK 620 6 DG M 15 OP1 98.1 158.7 115.9 101.0 55.9 REMARK 620 7 DC N 15 OP1 157.7 74.0 76.7 81.4 92.8 88.5 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG K1184 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP K 21 OD2 REMARK 620 2 ALA K 116 O 87.2 REMARK 620 3 HOH K2005 O 90.2 98.8 REMARK 620 4 DA L 14 OP1 86.3 165.0 94.7 REMARK 620 5 DC O 16 OP3 117.9 88.3 151.4 82.9 REMARK 620 6 DC O 16 OP1 174.9 88.2 92.6 97.7 59.8 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT A 1190 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT A 1191 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT F 1198 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 1188 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG K 1183 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 1189 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG F 1196 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG F 1197 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG K 1184 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4D6O RELATED DB: PDB REMARK 900 THE CRYSTAL STRUCTURE OF I-DMOI IN COMPLEX WITH ITS TARGET DNA AT REMARK 900 1H INCUBATION IN 5MM MG (STATE 2) DBREF 4D6N A 2 188 UNP P21505 DMO1_DESMO 2 188 DBREF 4D6N F 2 188 UNP P21505 DMO1_DESMO 2 188 DBREF 4D6N K 2 188 UNP P21505 DMO1_DESMO 2 188 DBREF 4D6N B 1 14 PDB 4D6N 4D6N 1 14 DBREF 4D6N G 1 14 PDB 4D6N 4D6N 1 14 DBREF 4D6N L 1 14 PDB 4D6N 4D6N 1 14 DBREF 4D6N D 1 15 PDB 4D6N 4D6N 1 15 DBREF 4D6N I 1 15 PDB 4D6N 4D6N 1 15 DBREF 4D6N N 1 15 PDB 4D6N 4D6N 1 15 DBREF 4D6N C 15 25 PDB 4D6N 4D6N 15 25 DBREF 4D6N H 15 25 PDB 4D6N 4D6N 15 25 DBREF 4D6N M 15 25 PDB 4D6N 4D6N 15 25 DBREF 4D6N E 16 25 PDB 4D6N 4D6N 16 25 DBREF 4D6N J 16 25 PDB 4D6N 4D6N 16 25 DBREF 4D6N O 16 25 PDB 4D6N 4D6N 16 25 SEQADV 4D6N ALA A 1 UNP P21505 EXPRESSION TAG SEQADV 4D6N ALA A 189 UNP P21505 EXPRESSION TAG SEQADV 4D6N ALA A 190 UNP P21505 EXPRESSION TAG SEQADV 4D6N ALA A 191 UNP P21505 EXPRESSION TAG SEQADV 4D6N LEU A 192 UNP P21505 EXPRESSION TAG SEQADV 4D6N GLU A 193 UNP P21505 EXPRESSION TAG SEQADV 4D6N HIS A 194 UNP P21505 EXPRESSION TAG SEQADV 4D6N HIS A 195 UNP P21505 EXPRESSION TAG SEQADV 4D6N HIS A 196 UNP P21505 EXPRESSION TAG SEQADV 4D6N HIS A 197 UNP P21505 EXPRESSION TAG SEQADV 4D6N HIS A 198 UNP P21505 EXPRESSION TAG SEQADV 4D6N HIS A 199 UNP P21505 EXPRESSION TAG SEQADV 4D6N ALA F 1 UNP P21505 EXPRESSION TAG SEQADV 4D6N ALA F 189 UNP P21505 EXPRESSION TAG SEQADV 4D6N ALA F 190 UNP P21505 EXPRESSION TAG SEQADV 4D6N ALA F 191 UNP P21505 EXPRESSION TAG SEQADV 4D6N LEU F 192 UNP P21505 EXPRESSION TAG SEQADV 4D6N GLU F 193 UNP P21505 EXPRESSION TAG SEQADV 4D6N HIS F 194 UNP P21505 EXPRESSION TAG SEQADV 4D6N HIS F 195 UNP P21505 EXPRESSION TAG SEQADV 4D6N HIS F 196 UNP P21505 EXPRESSION TAG SEQADV 4D6N HIS F 197 UNP P21505 EXPRESSION TAG SEQADV 4D6N HIS F 198 UNP P21505 EXPRESSION TAG SEQADV 4D6N HIS F 199 UNP P21505 EXPRESSION TAG SEQADV 4D6N ALA K 1 UNP P21505 EXPRESSION TAG SEQADV 4D6N ALA K 189 UNP P21505 EXPRESSION TAG SEQADV 4D6N ALA K 190 UNP P21505 EXPRESSION TAG SEQADV 4D6N ALA K 191 UNP P21505 EXPRESSION TAG SEQADV 4D6N LEU K 192 UNP P21505 EXPRESSION TAG SEQADV 4D6N GLU K 193 UNP P21505 EXPRESSION TAG SEQADV 4D6N HIS K 194 UNP P21505 EXPRESSION TAG SEQADV 4D6N HIS K 195 UNP P21505 EXPRESSION TAG SEQADV 4D6N HIS K 196 UNP P21505 EXPRESSION TAG SEQADV 4D6N HIS K 197 UNP P21505 EXPRESSION TAG SEQADV 4D6N HIS K 198 UNP P21505 EXPRESSION TAG SEQADV 4D6N HIS K 199 UNP P21505 EXPRESSION TAG SEQRES 1 A 199 ALA HIS ASN ASN GLU ASN VAL SER GLY ILE SER ALA TYR SEQRES 2 A 199 LEU LEU GLY LEU ILE ILE GLY ASP GLY GLY LEU TYR LYS SEQRES 3 A 199 LEU LYS TYR LYS GLY ASN ARG SER GLU TYR ARG VAL VAL SEQRES 4 A 199 ILE THR GLN LYS SER GLU ASN LEU ILE LYS GLN HIS ILE SEQRES 5 A 199 ALA PRO LEU MET GLN PHE LEU ILE ASP GLU LEU ASN VAL SEQRES 6 A 199 LYS SER LYS ILE GLN ILE VAL LYS GLY ASP THR ARG TYR SEQRES 7 A 199 GLU LEU ARG VAL SER SER LYS LYS LEU TYR TYR TYR PHE SEQRES 8 A 199 ALA ASN MET LEU GLU ARG ILE ARG LEU PHE ASN MET ARG SEQRES 9 A 199 GLU GLN ILE ALA PHE ILE LYS GLY LEU TYR VAL ALA GLU SEQRES 10 A 199 GLY ASP LYS THR LEU LYS ARG LEU ARG ILE TRP ASN LYS SEQRES 11 A 199 ASN LYS ALA LEU LEU GLU ILE VAL SER ARG TRP LEU ASN SEQRES 12 A 199 ASN LEU GLY VAL ARG ASN THR ILE HIS LEU ASP ASP HIS SEQRES 13 A 199 ARG HIS GLY VAL TYR VAL LEU ASN ILE SER LEU ARG ASP SEQRES 14 A 199 ARG ILE LYS PHE VAL HIS THR ILE LEU SER SER HIS LEU SEQRES 15 A 199 ASN PRO LEU PRO PRO GLU ALA ALA ALA LEU GLU HIS HIS SEQRES 16 A 199 HIS HIS HIS HIS SEQRES 1 B 14 DG DC DC DT DT DG DC DC DG DG DG DT DA SEQRES 2 B 14 DA SEQRES 1 C 11 DG DT DT DC DC DG DG DC DG DC DG SEQRES 1 D 15 DC DG DC DG DC DC DG DG DA DA DC DT DT SEQRES 2 D 15 DA DC SEQRES 1 E 10 DC DC DG DG DC DA DA DG DG DC SEQRES 1 F 199 ALA HIS ASN ASN GLU ASN VAL SER GLY ILE SER ALA TYR SEQRES 2 F 199 LEU LEU GLY LEU ILE ILE GLY ASP GLY GLY LEU TYR LYS SEQRES 3 F 199 LEU LYS TYR LYS GLY ASN ARG SER GLU TYR ARG VAL VAL SEQRES 4 F 199 ILE THR GLN LYS SER GLU ASN LEU ILE LYS GLN HIS ILE SEQRES 5 F 199 ALA PRO LEU MET GLN PHE LEU ILE ASP GLU LEU ASN VAL SEQRES 6 F 199 LYS SER LYS ILE GLN ILE VAL LYS GLY ASP THR ARG TYR SEQRES 7 F 199 GLU LEU ARG VAL SER SER LYS LYS LEU TYR TYR TYR PHE SEQRES 8 F 199 ALA ASN MET LEU GLU ARG ILE ARG LEU PHE ASN MET ARG SEQRES 9 F 199 GLU GLN ILE ALA PHE ILE LYS GLY LEU TYR VAL ALA GLU SEQRES 10 F 199 GLY ASP LYS THR LEU LYS ARG LEU ARG ILE TRP ASN LYS SEQRES 11 F 199 ASN LYS ALA LEU LEU GLU ILE VAL SER ARG TRP LEU ASN SEQRES 12 F 199 ASN LEU GLY VAL ARG ASN THR ILE HIS LEU ASP ASP HIS SEQRES 13 F 199 ARG HIS GLY VAL TYR VAL LEU ASN ILE SER LEU ARG ASP SEQRES 14 F 199 ARG ILE LYS PHE VAL HIS THR ILE LEU SER SER HIS LEU SEQRES 15 F 199 ASN PRO LEU PRO PRO GLU ALA ALA ALA LEU GLU HIS HIS SEQRES 16 F 199 HIS HIS HIS HIS SEQRES 1 G 14 DG DC DC DT DT DG DC DC DG DG DG DT DA SEQRES 2 G 14 DA SEQRES 1 H 11 DG DT DT DC DC DG DG DC DG DC DG SEQRES 1 I 15 DC DG DC DG DC DC DG DG DA DA DC DT DT SEQRES 2 I 15 DA DC SEQRES 1 J 10 DC DC DG DG DC DA DA DG DG DC SEQRES 1 K 199 ALA HIS ASN ASN GLU ASN VAL SER GLY ILE SER ALA TYR SEQRES 2 K 199 LEU LEU GLY LEU ILE ILE GLY ASP GLY GLY LEU TYR LYS SEQRES 3 K 199 LEU LYS TYR LYS GLY ASN ARG SER GLU TYR ARG VAL VAL SEQRES 4 K 199 ILE THR GLN LYS SER GLU ASN LEU ILE LYS GLN HIS ILE SEQRES 5 K 199 ALA PRO LEU MET GLN PHE LEU ILE ASP GLU LEU ASN VAL SEQRES 6 K 199 LYS SER LYS ILE GLN ILE VAL LYS GLY ASP THR ARG TYR SEQRES 7 K 199 GLU LEU ARG VAL SER SER LYS LYS LEU TYR TYR TYR PHE SEQRES 8 K 199 ALA ASN MET LEU GLU ARG ILE ARG LEU PHE ASN MET ARG SEQRES 9 K 199 GLU GLN ILE ALA PHE ILE LYS GLY LEU TYR VAL ALA GLU SEQRES 10 K 199 GLY ASP LYS THR LEU LYS ARG LEU ARG ILE TRP ASN LYS SEQRES 11 K 199 ASN LYS ALA LEU LEU GLU ILE VAL SER ARG TRP LEU ASN SEQRES 12 K 199 ASN LEU GLY VAL ARG ASN THR ILE HIS LEU ASP ASP HIS SEQRES 13 K 199 ARG HIS GLY VAL TYR VAL LEU ASN ILE SER LEU ARG ASP SEQRES 14 K 199 ARG ILE LYS PHE VAL HIS THR ILE LEU SER SER HIS LEU SEQRES 15 K 199 ASN PRO LEU PRO PRO GLU ALA ALA ALA LEU GLU HIS HIS SEQRES 16 K 199 HIS HIS HIS HIS SEQRES 1 L 14 DG DC DC DT DT DG DC DC DG DG DG DT DA SEQRES 2 L 14 DA SEQRES 1 M 11 DG DT DT DC DC DG DG DC DG DC DG SEQRES 1 N 15 DC DG DC DG DC DC DG DG DA DA DC DT DT SEQRES 2 N 15 DA DC SEQRES 1 O 10 DC DC DG DG DC DA DA DG DG DC HET MG A1188 1 HET MG A1189 1 HET ACT A1190 4 HET ACT A1191 4 HET MG F1196 1 HET MG F1197 1 HET ACT F1198 4 HET MG K1183 1 HET MG K1184 1 HETNAM MG MAGNESIUM ION HETNAM ACT ACETATE ION FORMUL 16 MG 6(MG 2+) FORMUL 18 ACT 3(C2 H3 O2 1-) FORMUL 25 HOH *167(H2 O) HELIX 1 1 VAL A 7 ASP A 21 1 15 HELIX 2 2 SER A 44 LYS A 49 1 6 HELIX 3 3 HIS A 51 ASN A 64 1 14 HELIX 4 4 SER A 84 ARG A 97 1 14 HELIX 5 5 ILE A 98 PHE A 101 5 4 HELIX 6 6 ASN A 102 GLY A 118 1 17 HELIX 7 7 ASN A 131 LEU A 145 1 15 HELIX 8 8 ASP A 169 ILE A 177 1 9 HELIX 9 9 GLU F 5 ASP F 21 1 17 HELIX 10 10 SER F 44 HIS F 51 1 8 HELIX 11 11 HIS F 51 LEU F 63 1 13 HELIX 12 12 SER F 84 ARG F 97 1 14 HELIX 13 13 ILE F 98 PHE F 101 5 4 HELIX 14 14 ASN F 102 GLY F 118 1 17 HELIX 15 15 ASN F 131 LEU F 145 1 15 HELIX 16 16 ASP F 169 ILE F 177 1 9 HELIX 17 17 PRO F 186 HIS F 194 1 9 HELIX 18 18 VAL K 7 ASP K 21 1 15 HELIX 19 19 SER K 44 HIS K 51 1 8 HELIX 20 20 HIS K 51 LEU K 63 1 13 HELIX 21 21 SER K 84 ARG K 97 1 14 HELIX 22 22 ILE K 98 PHE K 101 5 4 HELIX 23 23 ASN K 102 GLY K 118 1 17 HELIX 24 24 ASN K 131 LEU K 145 1 15 HELIX 25 25 ASP K 169 ILE K 177 1 9 SHEET 1 AA 4 GLY A 22 LYS A 28 0 SHEET 2 AA 4 SER A 34 GLN A 42 -1 O GLU A 35 N LEU A 27 SHEET 3 AA 4 TYR A 78 SER A 83 -1 O TYR A 78 N GLN A 42 SHEET 4 AA 4 ILE A 69 LYS A 73 -1 O GLN A 70 N ARG A 81 SHEET 1 AB 3 LEU A 125 ASN A 129 0 SHEET 2 AB 3 VAL A 160 ILE A 165 -1 O TYR A 161 N ASN A 129 SHEET 3 AB 3 ASN A 149 ASP A 155 -1 O THR A 150 N ASN A 164 SHEET 1 FA 4 GLY F 22 LYS F 28 0 SHEET 2 FA 4 SER F 34 GLN F 42 -1 O GLU F 35 N LEU F 27 SHEET 3 FA 4 TYR F 78 SER F 83 -1 O TYR F 78 N GLN F 42 SHEET 4 FA 4 ILE F 69 LYS F 73 -1 O GLN F 70 N ARG F 81 SHEET 1 FB 3 LEU F 125 ASN F 129 0 SHEET 2 FB 3 VAL F 160 ILE F 165 -1 O TYR F 161 N ASN F 129 SHEET 3 FB 3 ASN F 149 ASP F 155 -1 O THR F 150 N ASN F 164 SHEET 1 KA 4 GLY K 22 LYS K 28 0 SHEET 2 KA 4 SER K 34 GLN K 42 -1 O GLU K 35 N LEU K 27 SHEET 3 KA 4 TYR K 78 SER K 83 -1 O TYR K 78 N GLN K 42 SHEET 4 KA 4 ILE K 69 LYS K 73 -1 O GLN K 70 N ARG K 81 SHEET 1 KB 3 LEU K 125 ASN K 129 0 SHEET 2 KB 3 VAL K 160 ILE K 165 -1 O TYR K 161 N ASN K 129 SHEET 3 KB 3 ASN K 149 ASP K 155 -1 O THR K 150 N ASN K 164 LINK O GLY A 20 MG MG A1188 1555 1555 2.32 LINK OD2 ASP A 21 MG MG A1189 1555 1555 2.11 LINK O ALA A 116 MG MG A1189 1555 1555 2.25 LINK OE1 GLU A 117 MG MG A1188 1555 1555 2.16 LINK OE2 GLU A 117 MG MG A1188 1555 1555 2.77 LINK MG MG A1188 O HOH A2007 1555 1555 2.20 LINK MG MG A1188 OP3 DG C 15 1555 1555 2.82 LINK MG MG A1188 OP1 DG C 15 1555 1555 2.03 LINK MG MG A1188 OP1 DC D 15 1555 1555 2.06 LINK MG MG A1189 O HOH A2009 1555 1555 1.97 LINK MG MG A1189 OP1 DA B 14 1555 1555 1.82 LINK MG MG A1189 OP1 DC E 16 1555 1555 2.85 LINK MG MG A1189 OP3 DC E 16 1555 1555 1.99 LINK O GLY F 20 MG MG F1197 1555 1555 2.26 LINK OD2 ASP F 21 MG MG F1196 1555 1555 2.29 LINK O ALA F 116 MG MG F1196 1555 1555 2.34 LINK OE2 GLU F 117 MG MG F1197 1555 1555 2.28 LINK MG MG F1196 O HOH F2003 1555 1555 2.02 LINK MG MG F1196 OP1 DA G 14 1555 1555 2.04 LINK MG MG F1196 OP3 DC J 16 1555 1555 2.50 LINK MG MG F1196 OP2 DC J 16 1555 1555 1.96 LINK MG MG F1197 O HOH F2001 1555 1555 2.10 LINK MG MG F1197 OP3 DG H 15 1555 1555 2.08 LINK MG MG F1197 OP2 DG H 15 1555 1555 2.42 LINK MG MG F1197 OP1 DC I 15 1555 1555 2.13 LINK O GLY K 20 MG MG K1183 1555 1555 2.03 LINK OD2 ASP K 21 MG MG K1184 1555 1555 2.30 LINK O ALA K 116 MG MG K1184 1555 1555 2.13 LINK OE2 GLU K 117 MG MG K1183 1555 1555 2.60 LINK OE1 GLU K 117 MG MG K1183 1555 1555 2.69 LINK MG MG K1183 O HOH K2003 1555 1555 2.19 LINK MG MG K1183 OP3 DG M 15 1555 1555 2.80 LINK MG MG K1183 OP1 DG M 15 1555 1555 1.96 LINK MG MG K1183 OP1 DC N 15 1555 1555 2.22 LINK MG MG K1184 O HOH K2005 1555 1555 1.98 LINK MG MG K1184 OP1 DA L 14 1555 1555 2.14 LINK MG MG K1184 OP3 DC O 16 1555 1555 1.81 LINK MG MG K1184 OP1 DC O 16 1555 1555 2.89 CISPEP 1 GLU A 5 ASN A 6 0 -10.34 CISPEP 2 GLY A 31 ASN A 32 0 -12.86 CISPEP 3 ASN K 6 VAL K 7 0 27.44 CISPEP 4 LYS K 30 GLY K 31 0 -6.78 CISPEP 5 GLY K 31 ASN K 32 0 -12.82 SITE 1 AC1 3 LEU A 182 ASN A 183 HOH A2059 SITE 1 AC2 1 ARG A 99 SITE 1 AC3 3 TYR F 114 PRO F 186 GLU F 188 SITE 1 AC4 6 GLY A 20 GLU A 117 ASN A 129 HOH A2007 SITE 2 AC4 6 DG C 15 DC D 15 SITE 1 AC5 6 ILE K 19 GLY K 20 GLU K 117 HOH K2003 SITE 2 AC5 6 DG M 15 DC N 15 SITE 1 AC6 5 ASP A 21 ALA A 116 HOH A2009 DA B 14 SITE 2 AC6 5 DC E 16 SITE 1 AC7 6 ASP F 21 ALA F 116 LYS F 120 HOH F2003 SITE 2 AC7 6 DA G 14 DC J 16 SITE 1 AC8 6 ILE F 19 GLY F 20 GLU F 117 HOH F2001 SITE 2 AC8 6 DG H 15 DC I 15 SITE 1 AC9 6 ASP K 21 ALA K 116 LYS K 120 HOH K2005 SITE 2 AC9 6 DA L 14 DC O 16 CRYST1 106.311 70.269 107.169 90.00 119.59 90.00 P 1 21 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009406 0.000000 0.005341 0.00000 SCALE2 0.000000 0.014231 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010731 0.00000