data_4D78 # _entry.id 4D78 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.308 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 4D78 PDBE EBI-62356 WWPDB D_1290062356 # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.content_type _pdbx_database_related.details PDB 4D6Z unspecified 'CYTOCHROME P450 3A4 BOUND TO IMIDAZOLE AND AN INHIBITOR' PDB 4D75 unspecified 'CYTOCHROME P450 3A4 BOUND TO AN INHIBITOR' PDB 4D7D unspecified 'CYTOCHROME P450 3A4 BOUND TO AN INHIBITOR' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4D78 _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2014-11-21 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Sevrioukova, I.' 1 'Poulos, T.' 2 # _citation.id primary _citation.title 'Structure-Based Inhibitor Design for Evaluation of a Cyp3A4 Pharmacophore Model.' _citation.journal_abbrev J.Med.Chem. _citation.journal_volume 59 _citation.page_first 4210 _citation.page_last ? _citation.year 2016 _citation.journal_id_ASTM JMCMAR _citation.country US _citation.journal_id_ISSN 0022-2623 _citation.journal_id_CSD 0151 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 26371436 _citation.pdbx_database_id_DOI 10.1021/ACS.JMEDCHEM.5B01146 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Kaur, P.' 1 ? primary 'Chamberlin, R.' 2 ? primary 'Poulos, T.L.' 3 ? primary 'Sevrioukova, I.F.' 4 ? # _cell.entry_id 4D78 _cell.length_a 75.920 _cell.length_b 100.360 _cell.length_c 124.750 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4D78 _symmetry.space_group_name_H-M 'I 2 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'CYTOCHROME P450 3A4' 55757.812 1 '1.14.13.157, 1.14.13.32, 1.14.13.67, 1.14.13.97' ? 'CATALYTIC DOMAIN, UNP RESIDUES 23-503' ? 2 non-polymer syn 'PROTOPORPHYRIN IX CONTAINING FE' 616.487 1 ? ? ? ? 3 non-polymer syn 'tert-butyl [(2S)-1-({3-oxo-3-[(pyridin-3-ylmethyl)amino]propyl}sulfanyl)-3-phenylpropan-2-yl]carbamate' 429.576 1 ? ? ? ? 4 non-polymer syn GLYCEROL 92.094 2 ? ? ? ? 5 water nat water 18.015 6 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name ;1,8-CINEOLE 2-EXO-MONOOXYGENASE, ALBENDAZOLE MONOOXYGENASE, ALBENDAZOLE SULFOXIDASE, CYPIIIA3, CYPIIIA4, CYTOCHROME P450 3A3, CYTOCHROME P450 HLP, CYTOCHROME P450 NF-25, CYTOCHROME P450-PCN1, NIFEDIPINE OXIDASE, QUININE 3-MONOOXYGENASE, TAUROCHENODEOXYCHOLATE 6-ALPHA-HYDROXYLASE ; # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MAYLYGTHSHGLFKKLGIPGPTPLPFLGNILSYHKGFCMFDMECHKKYGKVWGFYDGQQPVLAITDPDMIKTVLVKECYS VFTNRRPFGPVGFMKSAISIAEDEEWKRLRSLLSPTFTSGKLKEMVPIIAQYGDVLVRNLRREAETGKPVTLKDVFGAYS MDVITSTSFGVNIDSLNNPQDPFVENTKKLLRFDFLDPFFLSITVFPFLIPILEVLNICVFPREVTNFLRKSVKRMKESR LEDTQKHRVDFLQLMIDSQNSKETESHKALSDLELVAQSIIFIFAGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLP NKAPPTYDTVLQMEYLDMVVNETLRLFPIAMRLERVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFS KKNKDNIDPYIYTPFGSGPRNCIGMRFALMNMKLALIRVLQNFSFKPCKETQIPLKLSLGGLLQPEKPVVLKVESRDGTV SGAHHHH ; _entity_poly.pdbx_seq_one_letter_code_can ;MAYLYGTHSHGLFKKLGIPGPTPLPFLGNILSYHKGFCMFDMECHKKYGKVWGFYDGQQPVLAITDPDMIKTVLVKECYS VFTNRRPFGPVGFMKSAISIAEDEEWKRLRSLLSPTFTSGKLKEMVPIIAQYGDVLVRNLRREAETGKPVTLKDVFGAYS MDVITSTSFGVNIDSLNNPQDPFVENTKKLLRFDFLDPFFLSITVFPFLIPILEVLNICVFPREVTNFLRKSVKRMKESR LEDTQKHRVDFLQLMIDSQNSKETESHKALSDLELVAQSIIFIFAGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLP NKAPPTYDTVLQMEYLDMVVNETLRLFPIAMRLERVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFS KKNKDNIDPYIYTPFGSGPRNCIGMRFALMNMKLALIRVLQNFSFKPCKETQIPLKLSLGGLLQPEKPVVLKVESRDGTV SGAHHHH ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 ALA n 1 3 TYR n 1 4 LEU n 1 5 TYR n 1 6 GLY n 1 7 THR n 1 8 HIS n 1 9 SER n 1 10 HIS n 1 11 GLY n 1 12 LEU n 1 13 PHE n 1 14 LYS n 1 15 LYS n 1 16 LEU n 1 17 GLY n 1 18 ILE n 1 19 PRO n 1 20 GLY n 1 21 PRO n 1 22 THR n 1 23 PRO n 1 24 LEU n 1 25 PRO n 1 26 PHE n 1 27 LEU n 1 28 GLY n 1 29 ASN n 1 30 ILE n 1 31 LEU n 1 32 SER n 1 33 TYR n 1 34 HIS n 1 35 LYS n 1 36 GLY n 1 37 PHE n 1 38 CYS n 1 39 MET n 1 40 PHE n 1 41 ASP n 1 42 MET n 1 43 GLU n 1 44 CYS n 1 45 HIS n 1 46 LYS n 1 47 LYS n 1 48 TYR n 1 49 GLY n 1 50 LYS n 1 51 VAL n 1 52 TRP n 1 53 GLY n 1 54 PHE n 1 55 TYR n 1 56 ASP n 1 57 GLY n 1 58 GLN n 1 59 GLN n 1 60 PRO n 1 61 VAL n 1 62 LEU n 1 63 ALA n 1 64 ILE n 1 65 THR n 1 66 ASP n 1 67 PRO n 1 68 ASP n 1 69 MET n 1 70 ILE n 1 71 LYS n 1 72 THR n 1 73 VAL n 1 74 LEU n 1 75 VAL n 1 76 LYS n 1 77 GLU n 1 78 CYS n 1 79 TYR n 1 80 SER n 1 81 VAL n 1 82 PHE n 1 83 THR n 1 84 ASN n 1 85 ARG n 1 86 ARG n 1 87 PRO n 1 88 PHE n 1 89 GLY n 1 90 PRO n 1 91 VAL n 1 92 GLY n 1 93 PHE n 1 94 MET n 1 95 LYS n 1 96 SER n 1 97 ALA n 1 98 ILE n 1 99 SER n 1 100 ILE n 1 101 ALA n 1 102 GLU n 1 103 ASP n 1 104 GLU n 1 105 GLU n 1 106 TRP n 1 107 LYS n 1 108 ARG n 1 109 LEU n 1 110 ARG n 1 111 SER n 1 112 LEU n 1 113 LEU n 1 114 SER n 1 115 PRO n 1 116 THR n 1 117 PHE n 1 118 THR n 1 119 SER n 1 120 GLY n 1 121 LYS n 1 122 LEU n 1 123 LYS n 1 124 GLU n 1 125 MET n 1 126 VAL n 1 127 PRO n 1 128 ILE n 1 129 ILE n 1 130 ALA n 1 131 GLN n 1 132 TYR n 1 133 GLY n 1 134 ASP n 1 135 VAL n 1 136 LEU n 1 137 VAL n 1 138 ARG n 1 139 ASN n 1 140 LEU n 1 141 ARG n 1 142 ARG n 1 143 GLU n 1 144 ALA n 1 145 GLU n 1 146 THR n 1 147 GLY n 1 148 LYS n 1 149 PRO n 1 150 VAL n 1 151 THR n 1 152 LEU n 1 153 LYS n 1 154 ASP n 1 155 VAL n 1 156 PHE n 1 157 GLY n 1 158 ALA n 1 159 TYR n 1 160 SER n 1 161 MET n 1 162 ASP n 1 163 VAL n 1 164 ILE n 1 165 THR n 1 166 SER n 1 167 THR n 1 168 SER n 1 169 PHE n 1 170 GLY n 1 171 VAL n 1 172 ASN n 1 173 ILE n 1 174 ASP n 1 175 SER n 1 176 LEU n 1 177 ASN n 1 178 ASN n 1 179 PRO n 1 180 GLN n 1 181 ASP n 1 182 PRO n 1 183 PHE n 1 184 VAL n 1 185 GLU n 1 186 ASN n 1 187 THR n 1 188 LYS n 1 189 LYS n 1 190 LEU n 1 191 LEU n 1 192 ARG n 1 193 PHE n 1 194 ASP n 1 195 PHE n 1 196 LEU n 1 197 ASP n 1 198 PRO n 1 199 PHE n 1 200 PHE n 1 201 LEU n 1 202 SER n 1 203 ILE n 1 204 THR n 1 205 VAL n 1 206 PHE n 1 207 PRO n 1 208 PHE n 1 209 LEU n 1 210 ILE n 1 211 PRO n 1 212 ILE n 1 213 LEU n 1 214 GLU n 1 215 VAL n 1 216 LEU n 1 217 ASN n 1 218 ILE n 1 219 CYS n 1 220 VAL n 1 221 PHE n 1 222 PRO n 1 223 ARG n 1 224 GLU n 1 225 VAL n 1 226 THR n 1 227 ASN n 1 228 PHE n 1 229 LEU n 1 230 ARG n 1 231 LYS n 1 232 SER n 1 233 VAL n 1 234 LYS n 1 235 ARG n 1 236 MET n 1 237 LYS n 1 238 GLU n 1 239 SER n 1 240 ARG n 1 241 LEU n 1 242 GLU n 1 243 ASP n 1 244 THR n 1 245 GLN n 1 246 LYS n 1 247 HIS n 1 248 ARG n 1 249 VAL n 1 250 ASP n 1 251 PHE n 1 252 LEU n 1 253 GLN n 1 254 LEU n 1 255 MET n 1 256 ILE n 1 257 ASP n 1 258 SER n 1 259 GLN n 1 260 ASN n 1 261 SER n 1 262 LYS n 1 263 GLU n 1 264 THR n 1 265 GLU n 1 266 SER n 1 267 HIS n 1 268 LYS n 1 269 ALA n 1 270 LEU n 1 271 SER n 1 272 ASP n 1 273 LEU n 1 274 GLU n 1 275 LEU n 1 276 VAL n 1 277 ALA n 1 278 GLN n 1 279 SER n 1 280 ILE n 1 281 ILE n 1 282 PHE n 1 283 ILE n 1 284 PHE n 1 285 ALA n 1 286 GLY n 1 287 TYR n 1 288 GLU n 1 289 THR n 1 290 THR n 1 291 SER n 1 292 SER n 1 293 VAL n 1 294 LEU n 1 295 SER n 1 296 PHE n 1 297 ILE n 1 298 MET n 1 299 TYR n 1 300 GLU n 1 301 LEU n 1 302 ALA n 1 303 THR n 1 304 HIS n 1 305 PRO n 1 306 ASP n 1 307 VAL n 1 308 GLN n 1 309 GLN n 1 310 LYS n 1 311 LEU n 1 312 GLN n 1 313 GLU n 1 314 GLU n 1 315 ILE n 1 316 ASP n 1 317 ALA n 1 318 VAL n 1 319 LEU n 1 320 PRO n 1 321 ASN n 1 322 LYS n 1 323 ALA n 1 324 PRO n 1 325 PRO n 1 326 THR n 1 327 TYR n 1 328 ASP n 1 329 THR n 1 330 VAL n 1 331 LEU n 1 332 GLN n 1 333 MET n 1 334 GLU n 1 335 TYR n 1 336 LEU n 1 337 ASP n 1 338 MET n 1 339 VAL n 1 340 VAL n 1 341 ASN n 1 342 GLU n 1 343 THR n 1 344 LEU n 1 345 ARG n 1 346 LEU n 1 347 PHE n 1 348 PRO n 1 349 ILE n 1 350 ALA n 1 351 MET n 1 352 ARG n 1 353 LEU n 1 354 GLU n 1 355 ARG n 1 356 VAL n 1 357 CYS n 1 358 LYS n 1 359 LYS n 1 360 ASP n 1 361 VAL n 1 362 GLU n 1 363 ILE n 1 364 ASN n 1 365 GLY n 1 366 MET n 1 367 PHE n 1 368 ILE n 1 369 PRO n 1 370 LYS n 1 371 GLY n 1 372 VAL n 1 373 VAL n 1 374 VAL n 1 375 MET n 1 376 ILE n 1 377 PRO n 1 378 SER n 1 379 TYR n 1 380 ALA n 1 381 LEU n 1 382 HIS n 1 383 ARG n 1 384 ASP n 1 385 PRO n 1 386 LYS n 1 387 TYR n 1 388 TRP n 1 389 THR n 1 390 GLU n 1 391 PRO n 1 392 GLU n 1 393 LYS n 1 394 PHE n 1 395 LEU n 1 396 PRO n 1 397 GLU n 1 398 ARG n 1 399 PHE n 1 400 SER n 1 401 LYS n 1 402 LYS n 1 403 ASN n 1 404 LYS n 1 405 ASP n 1 406 ASN n 1 407 ILE n 1 408 ASP n 1 409 PRO n 1 410 TYR n 1 411 ILE n 1 412 TYR n 1 413 THR n 1 414 PRO n 1 415 PHE n 1 416 GLY n 1 417 SER n 1 418 GLY n 1 419 PRO n 1 420 ARG n 1 421 ASN n 1 422 CYS n 1 423 ILE n 1 424 GLY n 1 425 MET n 1 426 ARG n 1 427 PHE n 1 428 ALA n 1 429 LEU n 1 430 MET n 1 431 ASN n 1 432 MET n 1 433 LYS n 1 434 LEU n 1 435 ALA n 1 436 LEU n 1 437 ILE n 1 438 ARG n 1 439 VAL n 1 440 LEU n 1 441 GLN n 1 442 ASN n 1 443 PHE n 1 444 SER n 1 445 PHE n 1 446 LYS n 1 447 PRO n 1 448 CYS n 1 449 LYS n 1 450 GLU n 1 451 THR n 1 452 GLN n 1 453 ILE n 1 454 PRO n 1 455 LEU n 1 456 LYS n 1 457 LEU n 1 458 SER n 1 459 LEU n 1 460 GLY n 1 461 GLY n 1 462 LEU n 1 463 LEU n 1 464 GLN n 1 465 PRO n 1 466 GLU n 1 467 LYS n 1 468 PRO n 1 469 VAL n 1 470 VAL n 1 471 LEU n 1 472 LYS n 1 473 VAL n 1 474 GLU n 1 475 SER n 1 476 ARG n 1 477 ASP n 1 478 GLY n 1 479 THR n 1 480 VAL n 1 481 SER n 1 482 GLY n 1 483 ALA n 1 484 HIS n 1 485 HIS n 1 486 HIS n 1 487 HIS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name HUMAN _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'HOMO SAPIENS' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'ESCHERICHIA COLI' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 511693 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain BL21 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PCWORI _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code CP3A4_HUMAN _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_db_accession P08684 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4D78 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 3 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 483 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P08684 _struct_ref_seq.db_align_beg 23 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 503 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 23 _struct_ref_seq.pdbx_auth_seq_align_end 503 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4D78 MET A 1 ? UNP P08684 ? ? 'expression tag' 21 1 1 4D78 ALA A 2 ? UNP P08684 ? ? 'expression tag' 22 2 1 4D78 HIS A 484 ? UNP P08684 ? ? 'expression tag' 504 3 1 4D78 HIS A 485 ? UNP P08684 ? ? 'expression tag' 505 4 1 4D78 HIS A 486 ? UNP P08684 ? ? 'expression tag' 506 5 1 4D78 HIS A 487 ? UNP P08684 ? ? 'expression tag' 507 6 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HEM non-polymer . 'PROTOPORPHYRIN IX CONTAINING FE' HEME 'C34 H32 Fe N4 O4' 616.487 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 J9K non-polymer . 'tert-butyl [(2S)-1-({3-oxo-3-[(pyridin-3-ylmethyl)amino]propyl}sulfanyl)-3-phenylpropan-2-yl]carbamate' ? 'C23 H31 N3 O3 S' 429.576 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 4D78 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.38 _exptl_crystal.density_percent_sol 48.3 _exptl_crystal.description NONE _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method MICROBATCH _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 5.0 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details 'MICROBATCH UNDER OIL WITH 10% PEG 3350 AND 80 MM SODIUM MALONATE PH 5.0' # _diffrn.id 1 _diffrn.ambient_temp 113 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 _diffrn.pdbx_serial_crystal_experiment ? # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC CCD' _diffrn_detector.pdbx_collection_date 2013-04-24 _diffrn_detector.details MIRRORS # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.0 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ALS BEAMLINE 8.2.1' _diffrn_source.pdbx_synchrotron_site ALS _diffrn_source.pdbx_synchrotron_beamline 8.2.1 _diffrn_source.pdbx_wavelength 1.0 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 4D78 _reflns.observed_criterion_sigma_I 2.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 65.90 _reflns.d_resolution_high 2.80 _reflns.number_obs 12092 _reflns.number_all ? _reflns.percent_possible_obs 100.0 _reflns.pdbx_Rmerge_I_obs 0.08 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 10.60 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 5.6 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 2.80 _reflns_shell.d_res_low 2.95 _reflns_shell.percent_possible_all 100.0 _reflns_shell.Rmerge_I_obs 0.40 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 1.90 _reflns_shell.pdbx_redundancy 5.9 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 4D78 _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 11496 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F . _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 64.85 _refine.ls_d_res_high 2.80 _refine.ls_percent_reflns_obs 99.79 _refine.ls_R_factor_obs 0.19702 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.19295 _refine.ls_R_factor_R_free 0.27237 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.8 _refine.ls_number_reflns_R_free 576 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.951 _refine.correlation_coeff_Fo_to_Fc_free 0.900 _refine.B_iso_mean 102.012 _refine.aniso_B[1][1] 0.23 _refine.aniso_B[2][2] -0.56 _refine.aniso_B[3][3] 0.33 _refine.aniso_B[1][2] -0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. RESIDUES 265-266 AND 280-288 ARE DISORDERED' _refine.pdbx_starting_model 'PDB ENTRY 1TQN' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free 0.446 _refine.overall_SU_ML 0.370 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 41.476 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 3698 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 85 _refine_hist.number_atoms_solvent 6 _refine_hist.number_atoms_total 3789 _refine_hist.d_res_high 2.80 _refine_hist.d_res_low 64.85 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.008 0.019 ? 3887 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.483 2.012 ? 5268 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 6.195 5.000 ? 457 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 37.733 23.827 ? 162 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 19.857 15.000 ? 691 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 19.133 15.000 ? 22 'X-RAY DIFFRACTION' ? r_chiral_restr 0.104 0.200 ? 581 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.006 0.021 ? 2887 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 3.752 6.687 ? 1837 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 5.966 10.025 ? 2291 'X-RAY DIFFRACTION' ? r_mcangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scbond_it 4.286 6.890 ? 2049 'X-RAY DIFFRACTION' ? r_scbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.800 _refine_ls_shell.d_res_low 2.873 _refine_ls_shell.number_reflns_R_work 832 _refine_ls_shell.R_factor_R_work 0.330 _refine_ls_shell.percent_reflns_obs 99.43 _refine_ls_shell.R_factor_R_free 0.433 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 43 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # _struct.entry_id 4D78 _struct.title 'Cytochrome P450 3A4 bound to an inhibitor' _struct.pdbx_descriptor 'CYTOCHROME P450 3A4 (E.C.1.14.13.157, 1.14.13.32, 1.14.13.67, 1.14.13.97)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4D78 _struct_keywords.pdbx_keywords OXIDOREDUCTASE _struct_keywords.text 'OXIDOREDUCTASE, MONOOXYGENASE, HUMAN CYP3A4, INHIBITORY COMPLEX' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? F N N 5 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLY A 11 ? GLY A 17 ? GLY A 31 GLY A 37 1 ? 7 HELX_P HELX_P2 2 ASN A 29 ? LYS A 35 ? ASN A 49 LYS A 55 5 ? 7 HELX_P HELX_P3 3 GLY A 36 ? GLY A 49 ? GLY A 56 GLY A 69 1 ? 14 HELX_P HELX_P4 4 ASP A 66 ? VAL A 75 ? ASP A 86 VAL A 95 1 ? 10 HELX_P HELX_P5 5 VAL A 91 ? ALA A 97 ? VAL A 111 ALA A 117 5 ? 7 HELX_P HELX_P6 6 GLU A 102 ? SER A 114 ? GLU A 122 SER A 134 1 ? 13 HELX_P HELX_P7 7 PRO A 115 ? PHE A 117 ? PRO A 135 PHE A 137 5 ? 3 HELX_P HELX_P8 8 THR A 118 ? GLY A 147 ? THR A 138 GLY A 167 1 ? 30 HELX_P HELX_P9 9 LEU A 152 ? SER A 168 ? LEU A 172 SER A 188 1 ? 17 HELX_P HELX_P10 10 ASP A 174 ? ASN A 178 ? ASP A 194 ASN A 198 5 ? 5 HELX_P HELX_P11 11 ASP A 181 ? LYS A 188 ? ASP A 201 LYS A 208 1 ? 8 HELX_P HELX_P12 12 ASP A 197 ? SER A 202 ? ASP A 217 SER A 222 1 ? 6 HELX_P HELX_P13 13 LEU A 209 ? LEU A 216 ? LEU A 229 LEU A 236 1 ? 8 HELX_P HELX_P14 14 GLU A 224 ? LEU A 241 ? GLU A 244 LEU A 261 1 ? 18 HELX_P HELX_P15 15 ASP A 250 ? GLN A 259 ? ASP A 270 GLN A 279 1 ? 10 HELX_P HELX_P16 16 ASP A 272 ? THR A 303 ? ASP A 292 THR A 323 1 ? 32 HELX_P HELX_P17 17 HIS A 304 ? LEU A 319 ? HIS A 324 LEU A 339 1 ? 16 HELX_P HELX_P18 18 THR A 326 ? MET A 333 ? THR A 346 MET A 353 1 ? 8 HELX_P HELX_P19 19 MET A 333 ? PHE A 347 ? MET A 353 PHE A 367 1 ? 15 HELX_P HELX_P20 20 PRO A 377 ? HIS A 382 ? PRO A 397 HIS A 402 1 ? 6 HELX_P HELX_P21 21 LEU A 395 ? SER A 400 ? LEU A 415 SER A 420 5 ? 6 HELX_P HELX_P22 22 ASN A 403 ? ILE A 407 ? ASN A 423 ILE A 427 5 ? 5 HELX_P HELX_P23 23 GLY A 424 ? GLN A 441 ? GLY A 444 GLN A 461 1 ? 18 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc1 metalc ? ? A CYS 422 SG ? ? ? 1_555 B HEM . FE ? ? A CYS 442 A HEM 1500 1_555 ? ? ? ? ? ? ? 2.258 ? metalc2 metalc ? ? B HEM . FE ? ? ? 1_555 C J9K . N22 ? ? A HEM 1500 A J9K 1600 1_555 ? ? ? ? ? ? ? 2.118 ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id ILE _struct_mon_prot_cis.label_seq_id 453 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id ILE _struct_mon_prot_cis.auth_seq_id 473 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 454 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 474 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -14.03 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA ? 4 ? AB ? 3 ? AC ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA 1 2 ? anti-parallel AA 2 3 ? parallel AA 3 4 ? anti-parallel AB 1 2 ? anti-parallel AB 2 3 ? anti-parallel AC 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA 1 VAL A 51 ? ASP A 56 ? VAL A 71 ASP A 76 AA 2 GLN A 59 ? ILE A 64 ? GLN A 79 ILE A 84 AA 3 VAL A 373 ? ILE A 376 ? VAL A 393 ILE A 396 AA 4 LEU A 353 ? VAL A 356 ? LEU A 373 VAL A 376 AB 1 VAL A 150 ? THR A 151 ? VAL A 170 THR A 171 AB 2 VAL A 470 ? SER A 475 ? VAL A 490 SER A 495 AB 3 PHE A 443 ? PRO A 447 ? PHE A 463 PRO A 467 AC 1 VAL A 361 ? GLU A 362 ? VAL A 381 GLU A 382 AC 2 PHE A 367 ? ILE A 368 ? PHE A 387 ILE A 388 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA 1 2 N ASP A 56 ? N ASP A 76 O GLN A 59 ? O GLN A 79 AA 2 3 N LEU A 62 ? N LEU A 82 O VAL A 373 ? O VAL A 393 AA 3 4 N ILE A 376 ? N ILE A 396 O LEU A 353 ? O LEU A 373 AB 1 2 N VAL A 150 ? N VAL A 170 O LEU A 471 ? O LEU A 491 AB 2 3 N GLU A 474 ? N GLU A 494 O SER A 444 ? O SER A 464 AC 1 2 N VAL A 361 ? N VAL A 381 O ILE A 368 ? O ILE A 388 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 23 'BINDING SITE FOR RESIDUE HEM A 1500' AC2 Software ? ? ? ? 7 'BINDING SITE FOR RESIDUE J9K A 1600' AC3 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE GOL A 1601' AC4 Software ? ? ? ? 7 'BINDING SITE FOR RESIDUE GOL A 1602' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 23 ARG A 85 ? ARG A 105 . ? 1_555 ? 2 AC1 23 ILE A 98 ? ILE A 118 . ? 1_555 ? 3 AC1 23 TRP A 106 ? TRP A 126 . ? 1_555 ? 4 AC1 23 ARG A 110 ? ARG A 130 . ? 1_555 ? 5 AC1 23 PHE A 117 ? PHE A 137 . ? 1_555 ? 6 AC1 23 ALA A 285 ? ALA A 305 . ? 1_555 ? 7 AC1 23 GLY A 286 ? GLY A 306 . ? 1_555 ? 8 AC1 23 THR A 289 ? THR A 309 . ? 1_555 ? 9 AC1 23 ILE A 349 ? ILE A 369 . ? 1_555 ? 10 AC1 23 ALA A 350 ? ALA A 370 . ? 1_555 ? 11 AC1 23 LEU A 353 ? LEU A 373 . ? 1_555 ? 12 AC1 23 ARG A 355 ? ARG A 375 . ? 1_555 ? 13 AC1 23 PRO A 414 ? PRO A 434 . ? 1_555 ? 14 AC1 23 PHE A 415 ? PHE A 435 . ? 1_555 ? 15 AC1 23 GLY A 416 ? GLY A 436 . ? 1_555 ? 16 AC1 23 SER A 417 ? SER A 437 . ? 1_555 ? 17 AC1 23 ARG A 420 ? ARG A 440 . ? 1_555 ? 18 AC1 23 ASN A 421 ? ASN A 441 . ? 1_555 ? 19 AC1 23 CYS A 422 ? CYS A 442 . ? 1_555 ? 20 AC1 23 ILE A 423 ? ILE A 443 . ? 1_555 ? 21 AC1 23 GLY A 424 ? GLY A 444 . ? 1_555 ? 22 AC1 23 ALA A 428 ? ALA A 448 . ? 1_555 ? 23 AC1 23 J9K C . ? J9K A 1600 . ? 1_555 ? 24 AC2 7 PHE A 88 ? PHE A 108 . ? 1_555 ? 25 AC2 7 LEU A 191 ? LEU A 211 . ? 1_555 ? 26 AC2 7 ILE A 281 ? ILE A 301 . ? 1_555 ? 27 AC2 7 PHE A 284 ? PHE A 304 . ? 1_555 ? 28 AC2 7 ALA A 285 ? ALA A 305 . ? 1_555 ? 29 AC2 7 ILE A 349 ? ILE A 369 . ? 1_555 ? 30 AC2 7 HEM B . ? HEM A 1500 . ? 1_555 ? 31 AC3 4 ASP A 405 ? ASP A 425 . ? 1_555 ? 32 AC3 4 ASN A 406 ? ASN A 426 . ? 1_555 ? 33 AC3 4 ILE A 407 ? ILE A 427 . ? 1_555 ? 34 AC3 4 PRO A 409 ? PRO A 429 . ? 1_555 ? 35 AC4 7 GLY A 36 ? GLY A 56 . ? 1_555 ? 36 AC4 7 PHE A 37 ? PHE A 57 . ? 1_555 ? 37 AC4 7 CYS A 38 ? CYS A 58 . ? 1_555 ? 38 AC4 7 MET A 39 ? MET A 59 . ? 1_555 ? 39 AC4 7 SER A 458 ? SER A 478 . ? 1_555 ? 40 AC4 7 LEU A 459 ? LEU A 479 . ? 1_555 ? 41 AC4 7 GLY A 460 ? GLY A 480 . ? 1_555 ? # _database_PDB_matrix.entry_id 4D78 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 4D78 _atom_sites.fract_transf_matrix[1][1] 0.013172 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.009964 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.008016 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C FE N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 21 ? ? ? A . n A 1 2 ALA 2 22 ? ? ? A . n A 1 3 TYR 3 23 ? ? ? A . n A 1 4 LEU 4 24 ? ? ? A . n A 1 5 TYR 5 25 ? ? ? A . n A 1 6 GLY 6 26 ? ? ? A . n A 1 7 THR 7 27 27 THR THR A . n A 1 8 HIS 8 28 28 HIS HIS A . n A 1 9 SER 9 29 29 SER SER A . n A 1 10 HIS 10 30 30 HIS HIS A . n A 1 11 GLY 11 31 31 GLY GLY A . n A 1 12 LEU 12 32 32 LEU LEU A . n A 1 13 PHE 13 33 33 PHE PHE A . n A 1 14 LYS 14 34 34 LYS LYS A . n A 1 15 LYS 15 35 35 LYS LYS A . n A 1 16 LEU 16 36 36 LEU LEU A . n A 1 17 GLY 17 37 37 GLY GLY A . n A 1 18 ILE 18 38 38 ILE ILE A . n A 1 19 PRO 19 39 39 PRO PRO A . n A 1 20 GLY 20 40 40 GLY GLY A . n A 1 21 PRO 21 41 41 PRO PRO A . n A 1 22 THR 22 42 42 THR THR A . n A 1 23 PRO 23 43 43 PRO PRO A . n A 1 24 LEU 24 44 44 LEU LEU A . n A 1 25 PRO 25 45 45 PRO PRO A . n A 1 26 PHE 26 46 46 PHE PHE A . n A 1 27 LEU 27 47 47 LEU LEU A . n A 1 28 GLY 28 48 48 GLY GLY A . n A 1 29 ASN 29 49 49 ASN ASN A . n A 1 30 ILE 30 50 50 ILE ILE A . n A 1 31 LEU 31 51 51 LEU LEU A . n A 1 32 SER 32 52 52 SER SER A . n A 1 33 TYR 33 53 53 TYR TYR A . n A 1 34 HIS 34 54 54 HIS HIS A . n A 1 35 LYS 35 55 55 LYS LYS A . n A 1 36 GLY 36 56 56 GLY GLY A . n A 1 37 PHE 37 57 57 PHE PHE A . n A 1 38 CYS 38 58 58 CYS CYS A . n A 1 39 MET 39 59 59 MET MET A . n A 1 40 PHE 40 60 60 PHE PHE A . n A 1 41 ASP 41 61 61 ASP ASP A . n A 1 42 MET 42 62 62 MET MET A . n A 1 43 GLU 43 63 63 GLU GLU A . n A 1 44 CYS 44 64 64 CYS CYS A . n A 1 45 HIS 45 65 65 HIS HIS A . n A 1 46 LYS 46 66 66 LYS LYS A . n A 1 47 LYS 47 67 67 LYS LYS A . n A 1 48 TYR 48 68 68 TYR TYR A . n A 1 49 GLY 49 69 69 GLY GLY A . n A 1 50 LYS 50 70 70 LYS LYS A . n A 1 51 VAL 51 71 71 VAL VAL A . n A 1 52 TRP 52 72 72 TRP TRP A . n A 1 53 GLY 53 73 73 GLY GLY A . n A 1 54 PHE 54 74 74 PHE PHE A . n A 1 55 TYR 55 75 75 TYR TYR A . n A 1 56 ASP 56 76 76 ASP ASP A . n A 1 57 GLY 57 77 77 GLY GLY A . n A 1 58 GLN 58 78 78 GLN GLN A . n A 1 59 GLN 59 79 79 GLN GLN A . n A 1 60 PRO 60 80 80 PRO PRO A . n A 1 61 VAL 61 81 81 VAL VAL A . n A 1 62 LEU 62 82 82 LEU LEU A . n A 1 63 ALA 63 83 83 ALA ALA A . n A 1 64 ILE 64 84 84 ILE ILE A . n A 1 65 THR 65 85 85 THR THR A . n A 1 66 ASP 66 86 86 ASP ASP A . n A 1 67 PRO 67 87 87 PRO PRO A . n A 1 68 ASP 68 88 88 ASP ASP A . n A 1 69 MET 69 89 89 MET MET A . n A 1 70 ILE 70 90 90 ILE ILE A . n A 1 71 LYS 71 91 91 LYS LYS A . n A 1 72 THR 72 92 92 THR THR A . n A 1 73 VAL 73 93 93 VAL VAL A . n A 1 74 LEU 74 94 94 LEU LEU A . n A 1 75 VAL 75 95 95 VAL VAL A . n A 1 76 LYS 76 96 96 LYS LYS A . n A 1 77 GLU 77 97 97 GLU GLU A . n A 1 78 CYS 78 98 98 CYS CYS A . n A 1 79 TYR 79 99 99 TYR TYR A . n A 1 80 SER 80 100 100 SER SER A . n A 1 81 VAL 81 101 101 VAL VAL A . n A 1 82 PHE 82 102 102 PHE PHE A . n A 1 83 THR 83 103 103 THR THR A . n A 1 84 ASN 84 104 104 ASN ASN A . n A 1 85 ARG 85 105 105 ARG ARG A . n A 1 86 ARG 86 106 106 ARG ARG A . n A 1 87 PRO 87 107 107 PRO PRO A . n A 1 88 PHE 88 108 108 PHE PHE A . n A 1 89 GLY 89 109 109 GLY GLY A . n A 1 90 PRO 90 110 110 PRO PRO A . n A 1 91 VAL 91 111 111 VAL VAL A . n A 1 92 GLY 92 112 112 GLY GLY A . n A 1 93 PHE 93 113 113 PHE PHE A . n A 1 94 MET 94 114 114 MET MET A . n A 1 95 LYS 95 115 115 LYS LYS A . n A 1 96 SER 96 116 116 SER SER A . n A 1 97 ALA 97 117 117 ALA ALA A . n A 1 98 ILE 98 118 118 ILE ILE A . n A 1 99 SER 99 119 119 SER SER A . n A 1 100 ILE 100 120 120 ILE ILE A . n A 1 101 ALA 101 121 121 ALA ALA A . n A 1 102 GLU 102 122 122 GLU GLU A . n A 1 103 ASP 103 123 123 ASP ASP A . n A 1 104 GLU 104 124 124 GLU GLU A . n A 1 105 GLU 105 125 125 GLU GLU A . n A 1 106 TRP 106 126 126 TRP TRP A . n A 1 107 LYS 107 127 127 LYS LYS A . n A 1 108 ARG 108 128 128 ARG ARG A . n A 1 109 LEU 109 129 129 LEU LEU A . n A 1 110 ARG 110 130 130 ARG ARG A . n A 1 111 SER 111 131 131 SER SER A . n A 1 112 LEU 112 132 132 LEU LEU A . n A 1 113 LEU 113 133 133 LEU LEU A . n A 1 114 SER 114 134 134 SER SER A . n A 1 115 PRO 115 135 135 PRO PRO A . n A 1 116 THR 116 136 136 THR THR A . n A 1 117 PHE 117 137 137 PHE PHE A . n A 1 118 THR 118 138 138 THR THR A . n A 1 119 SER 119 139 139 SER SER A . n A 1 120 GLY 120 140 140 GLY GLY A . n A 1 121 LYS 121 141 141 LYS LYS A . n A 1 122 LEU 122 142 142 LEU LEU A . n A 1 123 LYS 123 143 143 LYS LYS A . n A 1 124 GLU 124 144 144 GLU GLU A . n A 1 125 MET 125 145 145 MET MET A . n A 1 126 VAL 126 146 146 VAL VAL A . n A 1 127 PRO 127 147 147 PRO PRO A . n A 1 128 ILE 128 148 148 ILE ILE A . n A 1 129 ILE 129 149 149 ILE ILE A . n A 1 130 ALA 130 150 150 ALA ALA A . n A 1 131 GLN 131 151 151 GLN GLN A . n A 1 132 TYR 132 152 152 TYR TYR A . n A 1 133 GLY 133 153 153 GLY GLY A . n A 1 134 ASP 134 154 154 ASP ASP A . n A 1 135 VAL 135 155 155 VAL VAL A . n A 1 136 LEU 136 156 156 LEU LEU A . n A 1 137 VAL 137 157 157 VAL VAL A . n A 1 138 ARG 138 158 158 ARG ARG A . n A 1 139 ASN 139 159 159 ASN ASN A . n A 1 140 LEU 140 160 160 LEU LEU A . n A 1 141 ARG 141 161 161 ARG ARG A . n A 1 142 ARG 142 162 162 ARG ARG A . n A 1 143 GLU 143 163 163 GLU GLU A . n A 1 144 ALA 144 164 164 ALA ALA A . n A 1 145 GLU 145 165 165 GLU GLU A . n A 1 146 THR 146 166 166 THR THR A . n A 1 147 GLY 147 167 167 GLY GLY A . n A 1 148 LYS 148 168 168 LYS LYS A . n A 1 149 PRO 149 169 169 PRO PRO A . n A 1 150 VAL 150 170 170 VAL VAL A . n A 1 151 THR 151 171 171 THR THR A . n A 1 152 LEU 152 172 172 LEU LEU A . n A 1 153 LYS 153 173 173 LYS LYS A . n A 1 154 ASP 154 174 174 ASP ASP A . n A 1 155 VAL 155 175 175 VAL VAL A . n A 1 156 PHE 156 176 176 PHE PHE A . n A 1 157 GLY 157 177 177 GLY GLY A . n A 1 158 ALA 158 178 178 ALA ALA A . n A 1 159 TYR 159 179 179 TYR TYR A . n A 1 160 SER 160 180 180 SER SER A . n A 1 161 MET 161 181 181 MET MET A . n A 1 162 ASP 162 182 182 ASP ASP A . n A 1 163 VAL 163 183 183 VAL VAL A . n A 1 164 ILE 164 184 184 ILE ILE A . n A 1 165 THR 165 185 185 THR THR A . n A 1 166 SER 166 186 186 SER SER A . n A 1 167 THR 167 187 187 THR THR A . n A 1 168 SER 168 188 188 SER SER A . n A 1 169 PHE 169 189 189 PHE PHE A . n A 1 170 GLY 170 190 190 GLY GLY A . n A 1 171 VAL 171 191 191 VAL VAL A . n A 1 172 ASN 172 192 192 ASN ASN A . n A 1 173 ILE 173 193 193 ILE ILE A . n A 1 174 ASP 174 194 194 ASP ASP A . n A 1 175 SER 175 195 195 SER SER A . n A 1 176 LEU 176 196 196 LEU LEU A . n A 1 177 ASN 177 197 197 ASN ASN A . n A 1 178 ASN 178 198 198 ASN ASN A . n A 1 179 PRO 179 199 199 PRO PRO A . n A 1 180 GLN 180 200 200 GLN GLN A . n A 1 181 ASP 181 201 201 ASP ASP A . n A 1 182 PRO 182 202 202 PRO PRO A . n A 1 183 PHE 183 203 203 PHE PHE A . n A 1 184 VAL 184 204 204 VAL VAL A . n A 1 185 GLU 185 205 205 GLU GLU A . n A 1 186 ASN 186 206 206 ASN ASN A . n A 1 187 THR 187 207 207 THR THR A . n A 1 188 LYS 188 208 208 LYS LYS A . n A 1 189 LYS 189 209 209 LYS LYS A . n A 1 190 LEU 190 210 210 LEU LEU A . n A 1 191 LEU 191 211 211 LEU LEU A . n A 1 192 ARG 192 212 212 ARG ARG A . n A 1 193 PHE 193 213 213 PHE PHE A . n A 1 194 ASP 194 214 214 ASP ASP A . n A 1 195 PHE 195 215 215 PHE PHE A . n A 1 196 LEU 196 216 216 LEU LEU A . n A 1 197 ASP 197 217 217 ASP ASP A . n A 1 198 PRO 198 218 218 PRO PRO A . n A 1 199 PHE 199 219 219 PHE PHE A . n A 1 200 PHE 200 220 220 PHE PHE A . n A 1 201 LEU 201 221 221 LEU LEU A . n A 1 202 SER 202 222 222 SER SER A . n A 1 203 ILE 203 223 223 ILE ILE A . n A 1 204 THR 204 224 224 THR THR A . n A 1 205 VAL 205 225 225 VAL VAL A . n A 1 206 PHE 206 226 226 PHE PHE A . n A 1 207 PRO 207 227 227 PRO PRO A . n A 1 208 PHE 208 228 228 PHE PHE A . n A 1 209 LEU 209 229 229 LEU LEU A . n A 1 210 ILE 210 230 230 ILE ILE A . n A 1 211 PRO 211 231 231 PRO PRO A . n A 1 212 ILE 212 232 232 ILE ILE A . n A 1 213 LEU 213 233 233 LEU LEU A . n A 1 214 GLU 214 234 234 GLU GLU A . n A 1 215 VAL 215 235 235 VAL VAL A . n A 1 216 LEU 216 236 236 LEU LEU A . n A 1 217 ASN 217 237 237 ASN ASN A . n A 1 218 ILE 218 238 238 ILE ILE A . n A 1 219 CYS 219 239 239 CYS CYS A . n A 1 220 VAL 220 240 240 VAL VAL A . n A 1 221 PHE 221 241 241 PHE PHE A . n A 1 222 PRO 222 242 242 PRO PRO A . n A 1 223 ARG 223 243 243 ARG ARG A . n A 1 224 GLU 224 244 244 GLU GLU A . n A 1 225 VAL 225 245 245 VAL VAL A . n A 1 226 THR 226 246 246 THR THR A . n A 1 227 ASN 227 247 247 ASN ASN A . n A 1 228 PHE 228 248 248 PHE PHE A . n A 1 229 LEU 229 249 249 LEU LEU A . n A 1 230 ARG 230 250 250 ARG ARG A . n A 1 231 LYS 231 251 251 LYS LYS A . n A 1 232 SER 232 252 252 SER SER A . n A 1 233 VAL 233 253 253 VAL VAL A . n A 1 234 LYS 234 254 254 LYS LYS A . n A 1 235 ARG 235 255 255 ARG ARG A . n A 1 236 MET 236 256 256 MET MET A . n A 1 237 LYS 237 257 257 LYS LYS A . n A 1 238 GLU 238 258 258 GLU GLU A . n A 1 239 SER 239 259 259 SER SER A . n A 1 240 ARG 240 260 260 ARG ARG A . n A 1 241 LEU 241 261 261 LEU LEU A . n A 1 242 GLU 242 262 262 GLU GLU A . n A 1 243 ASP 243 263 263 ASP ASP A . n A 1 244 THR 244 264 264 THR THR A . n A 1 245 GLN 245 265 ? ? ? A . n A 1 246 LYS 246 266 ? ? ? A . n A 1 247 HIS 247 267 267 HIS HIS A . n A 1 248 ARG 248 268 268 ARG ARG A . n A 1 249 VAL 249 269 269 VAL VAL A . n A 1 250 ASP 250 270 270 ASP ASP A . n A 1 251 PHE 251 271 271 PHE PHE A . n A 1 252 LEU 252 272 272 LEU LEU A . n A 1 253 GLN 253 273 273 GLN GLN A . n A 1 254 LEU 254 274 274 LEU LEU A . n A 1 255 MET 255 275 275 MET MET A . n A 1 256 ILE 256 276 276 ILE ILE A . n A 1 257 ASP 257 277 277 ASP ASP A . n A 1 258 SER 258 278 278 SER SER A . n A 1 259 GLN 259 279 279 GLN GLN A . n A 1 260 ASN 260 280 ? ? ? A . n A 1 261 SER 261 281 ? ? ? A . n A 1 262 LYS 262 282 ? ? ? A . n A 1 263 GLU 263 283 ? ? ? A . n A 1 264 THR 264 284 ? ? ? A . n A 1 265 GLU 265 285 ? ? ? A . n A 1 266 SER 266 286 ? ? ? A . n A 1 267 HIS 267 287 ? ? ? A . n A 1 268 LYS 268 288 ? ? ? A . n A 1 269 ALA 269 289 289 ALA ALA A . n A 1 270 LEU 270 290 290 LEU LEU A . n A 1 271 SER 271 291 291 SER SER A . n A 1 272 ASP 272 292 292 ASP ASP A . n A 1 273 LEU 273 293 293 LEU LEU A . n A 1 274 GLU 274 294 294 GLU GLU A . n A 1 275 LEU 275 295 295 LEU LEU A . n A 1 276 VAL 276 296 296 VAL VAL A . n A 1 277 ALA 277 297 297 ALA ALA A . n A 1 278 GLN 278 298 298 GLN GLN A . n A 1 279 SER 279 299 299 SER SER A . n A 1 280 ILE 280 300 300 ILE ILE A . n A 1 281 ILE 281 301 301 ILE ILE A . n A 1 282 PHE 282 302 302 PHE PHE A . n A 1 283 ILE 283 303 303 ILE ILE A . n A 1 284 PHE 284 304 304 PHE PHE A . n A 1 285 ALA 285 305 305 ALA ALA A . n A 1 286 GLY 286 306 306 GLY GLY A . n A 1 287 TYR 287 307 307 TYR TYR A . n A 1 288 GLU 288 308 308 GLU GLU A . n A 1 289 THR 289 309 309 THR THR A . n A 1 290 THR 290 310 310 THR THR A . n A 1 291 SER 291 311 311 SER SER A . n A 1 292 SER 292 312 312 SER SER A . n A 1 293 VAL 293 313 313 VAL VAL A . n A 1 294 LEU 294 314 314 LEU LEU A . n A 1 295 SER 295 315 315 SER SER A . n A 1 296 PHE 296 316 316 PHE PHE A . n A 1 297 ILE 297 317 317 ILE ILE A . n A 1 298 MET 298 318 318 MET MET A . n A 1 299 TYR 299 319 319 TYR TYR A . n A 1 300 GLU 300 320 320 GLU GLU A . n A 1 301 LEU 301 321 321 LEU LEU A . n A 1 302 ALA 302 322 322 ALA ALA A . n A 1 303 THR 303 323 323 THR THR A . n A 1 304 HIS 304 324 324 HIS HIS A . n A 1 305 PRO 305 325 325 PRO PRO A . n A 1 306 ASP 306 326 326 ASP ASP A . n A 1 307 VAL 307 327 327 VAL VAL A . n A 1 308 GLN 308 328 328 GLN GLN A . n A 1 309 GLN 309 329 329 GLN GLN A . n A 1 310 LYS 310 330 330 LYS LYS A . n A 1 311 LEU 311 331 331 LEU LEU A . n A 1 312 GLN 312 332 332 GLN GLN A . n A 1 313 GLU 313 333 333 GLU GLU A . n A 1 314 GLU 314 334 334 GLU GLU A . n A 1 315 ILE 315 335 335 ILE ILE A . n A 1 316 ASP 316 336 336 ASP ASP A . n A 1 317 ALA 317 337 337 ALA ALA A . n A 1 318 VAL 318 338 338 VAL VAL A . n A 1 319 LEU 319 339 339 LEU LEU A . n A 1 320 PRO 320 340 340 PRO PRO A . n A 1 321 ASN 321 341 341 ASN ASN A . n A 1 322 LYS 322 342 342 LYS LYS A . n A 1 323 ALA 323 343 343 ALA ALA A . n A 1 324 PRO 324 344 344 PRO PRO A . n A 1 325 PRO 325 345 345 PRO PRO A . n A 1 326 THR 326 346 346 THR THR A . n A 1 327 TYR 327 347 347 TYR TYR A . n A 1 328 ASP 328 348 348 ASP ASP A . n A 1 329 THR 329 349 349 THR THR A . n A 1 330 VAL 330 350 350 VAL VAL A . n A 1 331 LEU 331 351 351 LEU LEU A . n A 1 332 GLN 332 352 352 GLN GLN A . n A 1 333 MET 333 353 353 MET MET A . n A 1 334 GLU 334 354 354 GLU GLU A . n A 1 335 TYR 335 355 355 TYR TYR A . n A 1 336 LEU 336 356 356 LEU LEU A . n A 1 337 ASP 337 357 357 ASP ASP A . n A 1 338 MET 338 358 358 MET MET A . n A 1 339 VAL 339 359 359 VAL VAL A . n A 1 340 VAL 340 360 360 VAL VAL A . n A 1 341 ASN 341 361 361 ASN ASN A . n A 1 342 GLU 342 362 362 GLU GLU A . n A 1 343 THR 343 363 363 THR THR A . n A 1 344 LEU 344 364 364 LEU LEU A . n A 1 345 ARG 345 365 365 ARG ARG A . n A 1 346 LEU 346 366 366 LEU LEU A . n A 1 347 PHE 347 367 367 PHE PHE A . n A 1 348 PRO 348 368 368 PRO PRO A . n A 1 349 ILE 349 369 369 ILE ILE A . n A 1 350 ALA 350 370 370 ALA ALA A . n A 1 351 MET 351 371 371 MET MET A . n A 1 352 ARG 352 372 372 ARG ARG A . n A 1 353 LEU 353 373 373 LEU LEU A . n A 1 354 GLU 354 374 374 GLU GLU A . n A 1 355 ARG 355 375 375 ARG ARG A . n A 1 356 VAL 356 376 376 VAL VAL A . n A 1 357 CYS 357 377 377 CYS CYS A . n A 1 358 LYS 358 378 378 LYS LYS A . n A 1 359 LYS 359 379 379 LYS LYS A . n A 1 360 ASP 360 380 380 ASP ASP A . n A 1 361 VAL 361 381 381 VAL VAL A . n A 1 362 GLU 362 382 382 GLU GLU A . n A 1 363 ILE 363 383 383 ILE ILE A . n A 1 364 ASN 364 384 384 ASN ASN A . n A 1 365 GLY 365 385 385 GLY GLY A . n A 1 366 MET 366 386 386 MET MET A . n A 1 367 PHE 367 387 387 PHE PHE A . n A 1 368 ILE 368 388 388 ILE ILE A . n A 1 369 PRO 369 389 389 PRO PRO A . n A 1 370 LYS 370 390 390 LYS LYS A . n A 1 371 GLY 371 391 391 GLY GLY A . n A 1 372 VAL 372 392 392 VAL VAL A . n A 1 373 VAL 373 393 393 VAL VAL A . n A 1 374 VAL 374 394 394 VAL VAL A . n A 1 375 MET 375 395 395 MET MET A . n A 1 376 ILE 376 396 396 ILE ILE A . n A 1 377 PRO 377 397 397 PRO PRO A . n A 1 378 SER 378 398 398 SER SER A . n A 1 379 TYR 379 399 399 TYR TYR A . n A 1 380 ALA 380 400 400 ALA ALA A . n A 1 381 LEU 381 401 401 LEU LEU A . n A 1 382 HIS 382 402 402 HIS HIS A . n A 1 383 ARG 383 403 403 ARG ARG A . n A 1 384 ASP 384 404 404 ASP ASP A . n A 1 385 PRO 385 405 405 PRO PRO A . n A 1 386 LYS 386 406 406 LYS LYS A . n A 1 387 TYR 387 407 407 TYR TYR A . n A 1 388 TRP 388 408 408 TRP TRP A . n A 1 389 THR 389 409 409 THR THR A . n A 1 390 GLU 390 410 410 GLU GLU A . n A 1 391 PRO 391 411 411 PRO PRO A . n A 1 392 GLU 392 412 412 GLU GLU A . n A 1 393 LYS 393 413 413 LYS LYS A . n A 1 394 PHE 394 414 414 PHE PHE A . n A 1 395 LEU 395 415 415 LEU LEU A . n A 1 396 PRO 396 416 416 PRO PRO A . n A 1 397 GLU 397 417 417 GLU GLU A . n A 1 398 ARG 398 418 418 ARG ARG A . n A 1 399 PHE 399 419 419 PHE PHE A . n A 1 400 SER 400 420 420 SER SER A . n A 1 401 LYS 401 421 421 LYS LYS A . n A 1 402 LYS 402 422 422 LYS LYS A . n A 1 403 ASN 403 423 423 ASN ASN A . n A 1 404 LYS 404 424 424 LYS LYS A . n A 1 405 ASP 405 425 425 ASP ASP A . n A 1 406 ASN 406 426 426 ASN ASN A . n A 1 407 ILE 407 427 427 ILE ILE A . n A 1 408 ASP 408 428 428 ASP ASP A . n A 1 409 PRO 409 429 429 PRO PRO A . n A 1 410 TYR 410 430 430 TYR TYR A . n A 1 411 ILE 411 431 431 ILE ILE A . n A 1 412 TYR 412 432 432 TYR TYR A . n A 1 413 THR 413 433 433 THR THR A . n A 1 414 PRO 414 434 434 PRO PRO A . n A 1 415 PHE 415 435 435 PHE PHE A . n A 1 416 GLY 416 436 436 GLY GLY A . n A 1 417 SER 417 437 437 SER SER A . n A 1 418 GLY 418 438 438 GLY GLY A . n A 1 419 PRO 419 439 439 PRO PRO A . n A 1 420 ARG 420 440 440 ARG ARG A . n A 1 421 ASN 421 441 441 ASN ASN A . n A 1 422 CYS 422 442 442 CYS CYS A . n A 1 423 ILE 423 443 443 ILE ILE A . n A 1 424 GLY 424 444 444 GLY GLY A . n A 1 425 MET 425 445 445 MET MET A . n A 1 426 ARG 426 446 446 ARG ARG A . n A 1 427 PHE 427 447 447 PHE PHE A . n A 1 428 ALA 428 448 448 ALA ALA A . n A 1 429 LEU 429 449 449 LEU LEU A . n A 1 430 MET 430 450 450 MET MET A . n A 1 431 ASN 431 451 451 ASN ASN A . n A 1 432 MET 432 452 452 MET MET A . n A 1 433 LYS 433 453 453 LYS LYS A . n A 1 434 LEU 434 454 454 LEU LEU A . n A 1 435 ALA 435 455 455 ALA ALA A . n A 1 436 LEU 436 456 456 LEU LEU A . n A 1 437 ILE 437 457 457 ILE ILE A . n A 1 438 ARG 438 458 458 ARG ARG A . n A 1 439 VAL 439 459 459 VAL VAL A . n A 1 440 LEU 440 460 460 LEU LEU A . n A 1 441 GLN 441 461 461 GLN GLN A . n A 1 442 ASN 442 462 462 ASN ASN A . n A 1 443 PHE 443 463 463 PHE PHE A . n A 1 444 SER 444 464 464 SER SER A . n A 1 445 PHE 445 465 465 PHE PHE A . n A 1 446 LYS 446 466 466 LYS LYS A . n A 1 447 PRO 447 467 467 PRO PRO A . n A 1 448 CYS 448 468 468 CYS CYS A . n A 1 449 LYS 449 469 469 LYS LYS A . n A 1 450 GLU 450 470 470 GLU GLU A . n A 1 451 THR 451 471 471 THR THR A . n A 1 452 GLN 452 472 472 GLN GLN A . n A 1 453 ILE 453 473 473 ILE ILE A . n A 1 454 PRO 454 474 474 PRO PRO A . n A 1 455 LEU 455 475 475 LEU LEU A . n A 1 456 LYS 456 476 476 LYS LYS A . n A 1 457 LEU 457 477 477 LEU LEU A . n A 1 458 SER 458 478 478 SER SER A . n A 1 459 LEU 459 479 479 LEU LEU A . n A 1 460 GLY 460 480 480 GLY GLY A . n A 1 461 GLY 461 481 481 GLY GLY A . n A 1 462 LEU 462 482 482 LEU LEU A . n A 1 463 LEU 463 483 483 LEU LEU A . n A 1 464 GLN 464 484 484 GLN GLN A . n A 1 465 PRO 465 485 485 PRO PRO A . n A 1 466 GLU 466 486 486 GLU GLU A . n A 1 467 LYS 467 487 487 LYS LYS A . n A 1 468 PRO 468 488 488 PRO PRO A . n A 1 469 VAL 469 489 489 VAL VAL A . n A 1 470 VAL 470 490 490 VAL VAL A . n A 1 471 LEU 471 491 491 LEU LEU A . n A 1 472 LYS 472 492 492 LYS LYS A . n A 1 473 VAL 473 493 493 VAL VAL A . n A 1 474 GLU 474 494 494 GLU GLU A . n A 1 475 SER 475 495 495 SER SER A . n A 1 476 ARG 476 496 496 ARG ARG A . n A 1 477 ASP 477 497 497 ASP ASP A . n A 1 478 GLY 478 498 ? ? ? A . n A 1 479 THR 479 499 ? ? ? A . n A 1 480 VAL 480 500 ? ? ? A . n A 1 481 SER 481 501 ? ? ? A . n A 1 482 GLY 482 502 ? ? ? A . n A 1 483 ALA 483 503 ? ? ? A . n A 1 484 HIS 484 504 ? ? ? A . n A 1 485 HIS 485 505 ? ? ? A . n A 1 486 HIS 486 506 ? ? ? A . n A 1 487 HIS 487 507 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HEM 1 1500 1500 HEM HEM A . C 3 J9K 1 1600 1600 J9K J9K A . D 4 GOL 1 1601 1601 GOL GOL A . E 4 GOL 1 1602 1602 GOL GOL A . F 5 HOH 1 2001 2001 HOH HOH A . F 5 HOH 2 2002 2002 HOH HOH A . F 5 HOH 3 2003 2003 HOH HOH A . F 5 HOH 4 2004 2004 HOH HOH A . F 5 HOH 5 2005 2005 HOH HOH A . F 5 HOH 6 2006 2006 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 SG ? A CYS 422 ? A CYS 442 ? 1_555 FE ? B HEM . ? A HEM 1500 ? 1_555 NA ? B HEM . ? A HEM 1500 ? 1_555 96.4 ? 2 SG ? A CYS 422 ? A CYS 442 ? 1_555 FE ? B HEM . ? A HEM 1500 ? 1_555 NB ? B HEM . ? A HEM 1500 ? 1_555 85.9 ? 3 NA ? B HEM . ? A HEM 1500 ? 1_555 FE ? B HEM . ? A HEM 1500 ? 1_555 NB ? B HEM . ? A HEM 1500 ? 1_555 89.3 ? 4 SG ? A CYS 422 ? A CYS 442 ? 1_555 FE ? B HEM . ? A HEM 1500 ? 1_555 NC ? B HEM . ? A HEM 1500 ? 1_555 84.3 ? 5 NA ? B HEM . ? A HEM 1500 ? 1_555 FE ? B HEM . ? A HEM 1500 ? 1_555 NC ? B HEM . ? A HEM 1500 ? 1_555 178.7 ? 6 NB ? B HEM . ? A HEM 1500 ? 1_555 FE ? B HEM . ? A HEM 1500 ? 1_555 NC ? B HEM . ? A HEM 1500 ? 1_555 89.7 ? 7 SG ? A CYS 422 ? A CYS 442 ? 1_555 FE ? B HEM . ? A HEM 1500 ? 1_555 ND ? B HEM . ? A HEM 1500 ? 1_555 94.2 ? 8 NA ? B HEM . ? A HEM 1500 ? 1_555 FE ? B HEM . ? A HEM 1500 ? 1_555 ND ? B HEM . ? A HEM 1500 ? 1_555 91.5 ? 9 NB ? B HEM . ? A HEM 1500 ? 1_555 FE ? B HEM . ? A HEM 1500 ? 1_555 ND ? B HEM . ? A HEM 1500 ? 1_555 179.2 ? 10 NC ? B HEM . ? A HEM 1500 ? 1_555 FE ? B HEM . ? A HEM 1500 ? 1_555 ND ? B HEM . ? A HEM 1500 ? 1_555 89.6 ? 11 SG ? A CYS 422 ? A CYS 442 ? 1_555 FE ? B HEM . ? A HEM 1500 ? 1_555 N22 ? C J9K . ? A J9K 1600 ? 1_555 173.9 ? 12 NA ? B HEM . ? A HEM 1500 ? 1_555 FE ? B HEM . ? A HEM 1500 ? 1_555 N22 ? C J9K . ? A J9K 1600 ? 1_555 88.2 ? 13 NB ? B HEM . ? A HEM 1500 ? 1_555 FE ? B HEM . ? A HEM 1500 ? 1_555 N22 ? C J9K . ? A J9K 1600 ? 1_555 90.2 ? 14 NC ? B HEM . ? A HEM 1500 ? 1_555 FE ? B HEM . ? A HEM 1500 ? 1_555 N22 ? C J9K . ? A J9K 1600 ? 1_555 91.0 ? 15 ND ? B HEM . ? A HEM 1500 ? 1_555 FE ? B HEM . ? A HEM 1500 ? 1_555 N22 ? C J9K . ? A J9K 1600 ? 1_555 89.7 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2015-09-23 2 'Structure model' 1 1 2015-09-30 3 'Structure model' 1 2 2016-05-25 4 'Structure model' 1 3 2019-05-08 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Experimental preparation' 5 4 'Structure model' Other # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' exptl_crystal_grow 2 4 'Structure model' pdbx_database_proc 3 4 'Structure model' pdbx_database_status 4 4 'Structure model' struct_biol # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_exptl_crystal_grow.method' 2 4 'Structure model' '_pdbx_database_status.recvd_author_approval' # _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x -19.0755 _pdbx_refine_tls.origin_y 26.4684 _pdbx_refine_tls.origin_z -12.4506 _pdbx_refine_tls.T[1][1] 0.1821 _pdbx_refine_tls.T[2][2] 0.0803 _pdbx_refine_tls.T[3][3] 0.0747 _pdbx_refine_tls.T[1][2] -0.0365 _pdbx_refine_tls.T[1][3] 0.0201 _pdbx_refine_tls.T[2][3] -0.0530 _pdbx_refine_tls.L[1][1] 2.6907 _pdbx_refine_tls.L[2][2] 4.7655 _pdbx_refine_tls.L[3][3] 2.5135 _pdbx_refine_tls.L[1][2] -1.1724 _pdbx_refine_tls.L[1][3] -0.5123 _pdbx_refine_tls.L[2][3] 0.8918 _pdbx_refine_tls.S[1][1] -0.1630 _pdbx_refine_tls.S[1][2] 0.1240 _pdbx_refine_tls.S[1][3] -0.3499 _pdbx_refine_tls.S[2][1] 0.5974 _pdbx_refine_tls.S[2][2] 0.0730 _pdbx_refine_tls.S[2][3] 0.1712 _pdbx_refine_tls.S[3][1] 0.4937 _pdbx_refine_tls.S[3][2] -0.1968 _pdbx_refine_tls.S[3][3] 0.0900 # _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_auth_asym_id A _pdbx_refine_tls_group.beg_auth_seq_id 27 _pdbx_refine_tls_group.beg_label_asym_id ? _pdbx_refine_tls_group.beg_label_seq_id ? _pdbx_refine_tls_group.end_auth_asym_id A _pdbx_refine_tls_group.end_auth_seq_id 602 _pdbx_refine_tls_group.end_label_asym_id ? _pdbx_refine_tls_group.end_label_seq_id ? _pdbx_refine_tls_group.selection ? _pdbx_refine_tls_group.selection_details ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal _software.date _software.type _software.location _software.language REFMAC refinement 5.8.0049 ? 1 ? ? ? ? MOSFLM 'data reduction' . ? 2 ? ? ? ? SCALA 'data scaling' . ? 3 ? ? ? ? PHASER phasing . ? 4 ? ? ? ? # _pdbx_entry_details.entry_id 4D78 _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ;NEEDS TO BE NAMED (LIG): FIGURE WITH THE HETEROGROUP STRUCTURE WILL BE EMAILED SEPARATELY ; _pdbx_entry_details.sequence_details ? # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 C A LYS 168 ? ? N A PRO 169 ? ? CA A PRO 169 ? ? 131.89 119.30 12.59 1.50 Y 2 1 CB A SER 222 ? ? CA A SER 222 ? ? C A SER 222 ? ? 98.59 110.10 -11.51 1.90 N 3 1 N A PRO 242 ? ? CA A PRO 242 ? ? C A PRO 242 ? ? 140.47 112.10 28.37 2.60 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 HIS A 28 ? ? -177.81 -151.65 2 1 SER A 29 ? ? 76.65 -66.99 3 1 PHE A 46 ? ? 72.38 -56.89 4 1 VAL A 101 ? ? -133.64 -41.51 5 1 PHE A 102 ? ? -104.47 70.14 6 1 PRO A 110 ? ? -56.55 102.99 7 1 ASP A 123 ? ? 40.41 -115.03 8 1 PHE A 137 ? ? -109.62 45.31 9 1 ALA A 150 ? ? -57.58 12.25 10 1 PRO A 169 ? ? -32.72 134.14 11 1 PHE A 213 ? ? -51.93 108.53 12 1 PHE A 219 ? ? -55.40 -75.02 13 1 ILE A 223 ? ? -125.67 -58.02 14 1 THR A 224 ? ? -65.06 20.78 15 1 VAL A 225 ? ? -141.61 -21.04 16 1 ASN A 237 ? ? 57.57 6.73 17 1 PHE A 241 ? ? -164.56 63.59 18 1 PRO A 242 ? ? -35.61 51.00 19 1 LEU A 261 ? ? -53.84 -0.73 20 1 ARG A 268 ? ? 77.11 156.38 21 1 ASP A 270 ? ? -118.39 -158.13 22 1 LYS A 342 ? ? 38.92 57.98 23 1 MET A 371 ? ? 78.87 -55.03 24 1 ASP A 404 ? ? -54.24 106.33 25 1 GLU A 410 ? ? 62.72 62.49 26 1 PRO A 429 ? ? -58.29 -9.76 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ASP 497 ? CA ? A ASP 477 CA 2 1 Y 1 A ASP 497 ? C ? A ASP 477 C 3 1 Y 1 A ASP 497 ? O ? A ASP 477 O 4 1 Y 1 A ASP 497 ? CB ? A ASP 477 CB 5 1 Y 1 A ASP 497 ? CG ? A ASP 477 CG 6 1 Y 1 A ASP 497 ? OD1 ? A ASP 477 OD1 7 1 Y 1 A ASP 497 ? OD2 ? A ASP 477 OD2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 21 ? A MET 1 2 1 Y 1 A ALA 22 ? A ALA 2 3 1 Y 1 A TYR 23 ? A TYR 3 4 1 Y 1 A LEU 24 ? A LEU 4 5 1 Y 1 A TYR 25 ? A TYR 5 6 1 Y 1 A GLY 26 ? A GLY 6 7 1 Y 1 A GLN 265 ? A GLN 245 8 1 Y 1 A LYS 266 ? A LYS 246 9 1 Y 1 A ASN 280 ? A ASN 260 10 1 Y 1 A SER 281 ? A SER 261 11 1 Y 1 A LYS 282 ? A LYS 262 12 1 Y 1 A GLU 283 ? A GLU 263 13 1 Y 1 A THR 284 ? A THR 264 14 1 Y 1 A GLU 285 ? A GLU 265 15 1 Y 1 A SER 286 ? A SER 266 16 1 Y 1 A HIS 287 ? A HIS 267 17 1 Y 1 A LYS 288 ? A LYS 268 18 1 Y 1 A GLY 498 ? A GLY 478 19 1 Y 1 A THR 499 ? A THR 479 20 1 Y 1 A VAL 500 ? A VAL 480 21 1 Y 1 A SER 501 ? A SER 481 22 1 Y 1 A GLY 502 ? A GLY 482 23 1 Y 1 A ALA 503 ? A ALA 483 24 1 Y 1 A HIS 504 ? A HIS 484 25 1 Y 1 A HIS 505 ? A HIS 485 26 1 Y 1 A HIS 506 ? A HIS 486 27 1 Y 1 A HIS 507 ? A HIS 487 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'PROTOPORPHYRIN IX CONTAINING FE' HEM 3 'tert-butyl [(2S)-1-({3-oxo-3-[(pyridin-3-ylmethyl)amino]propyl}sulfanyl)-3-phenylpropan-2-yl]carbamate' J9K 4 GLYCEROL GOL 5 water HOH #