data_4D7B # _entry.id 4D7B # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.279 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 4D7B PDBE EBI-62353 WWPDB D_1290062353 # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4D7B _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2014-11-21 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Gallego, P.' 1 ? ;Sant'anna, R.O. ; 2 ? 'Ventura, S.' 3 ? 'Reverter, D.' 4 ? # _citation.id primary _citation.title 'Repositioning Tolcapone as a Potent Inhibitor of Transthyretin Amyloidogenesis and its Associated Cellular Toxicity' _citation.journal_abbrev Nat.Commun. _citation.journal_volume 7 _citation.page_first 10787 _citation.page_last ? _citation.year 2016 _citation.journal_id_ASTM ? _citation.country UK _citation.journal_id_ISSN 2041-1723 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 26902880 _citation.pdbx_database_id_DOI 10.1038/NCOMMS10787 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Reverter, D.' 1 primary 'Gallego, P.' 2 primary 'Santana, R.' 3 primary 'Ventura, S.' 4 # _cell.entry_id 4D7B _cell.length_a 84.112 _cell.length_b 43.807 _cell.length_c 65.852 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4D7B _symmetry.space_group_name_H-M 'P 21 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man TRANSTHYRETIN 13908.557 2 ? ? ? ? 2 non-polymer syn Tolcapone 273.241 2 ? ? ? ? 3 water nat water 18.015 221 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'ATTR, PREALBUMIN, TBPA' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MGPTGTGESKCPLMVKVLDAVRGSPAINVAVHVFRKAADDTWEPFASGKTSESGELHGLTTEEEFVEGIYKVEIDTKSYW KALGISPFHEHAEVVFTANDSGPRRYTIAALLSPYSYSTTAVVTNPKE ; _entity_poly.pdbx_seq_one_letter_code_can ;MGPTGTGESKCPLMVKVLDAVRGSPAINVAVHVFRKAADDTWEPFASGKTSESGELHGLTTEEEFVEGIYKVEIDTKSYW KALGISPFHEHAEVVFTANDSGPRRYTIAALLSPYSYSTTAVVTNPKE ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 GLY n 1 3 PRO n 1 4 THR n 1 5 GLY n 1 6 THR n 1 7 GLY n 1 8 GLU n 1 9 SER n 1 10 LYS n 1 11 CYS n 1 12 PRO n 1 13 LEU n 1 14 MET n 1 15 VAL n 1 16 LYS n 1 17 VAL n 1 18 LEU n 1 19 ASP n 1 20 ALA n 1 21 VAL n 1 22 ARG n 1 23 GLY n 1 24 SER n 1 25 PRO n 1 26 ALA n 1 27 ILE n 1 28 ASN n 1 29 VAL n 1 30 ALA n 1 31 VAL n 1 32 HIS n 1 33 VAL n 1 34 PHE n 1 35 ARG n 1 36 LYS n 1 37 ALA n 1 38 ALA n 1 39 ASP n 1 40 ASP n 1 41 THR n 1 42 TRP n 1 43 GLU n 1 44 PRO n 1 45 PHE n 1 46 ALA n 1 47 SER n 1 48 GLY n 1 49 LYS n 1 50 THR n 1 51 SER n 1 52 GLU n 1 53 SER n 1 54 GLY n 1 55 GLU n 1 56 LEU n 1 57 HIS n 1 58 GLY n 1 59 LEU n 1 60 THR n 1 61 THR n 1 62 GLU n 1 63 GLU n 1 64 GLU n 1 65 PHE n 1 66 VAL n 1 67 GLU n 1 68 GLY n 1 69 ILE n 1 70 TYR n 1 71 LYS n 1 72 VAL n 1 73 GLU n 1 74 ILE n 1 75 ASP n 1 76 THR n 1 77 LYS n 1 78 SER n 1 79 TYR n 1 80 TRP n 1 81 LYS n 1 82 ALA n 1 83 LEU n 1 84 GLY n 1 85 ILE n 1 86 SER n 1 87 PRO n 1 88 PHE n 1 89 HIS n 1 90 GLU n 1 91 HIS n 1 92 ALA n 1 93 GLU n 1 94 VAL n 1 95 VAL n 1 96 PHE n 1 97 THR n 1 98 ALA n 1 99 ASN n 1 100 ASP n 1 101 SER n 1 102 GLY n 1 103 PRO n 1 104 ARG n 1 105 ARG n 1 106 TYR n 1 107 THR n 1 108 ILE n 1 109 ALA n 1 110 ALA n 1 111 LEU n 1 112 LEU n 1 113 SER n 1 114 PRO n 1 115 TYR n 1 116 SER n 1 117 TYR n 1 118 SER n 1 119 THR n 1 120 THR n 1 121 ALA n 1 122 VAL n 1 123 VAL n 1 124 THR n 1 125 ASN n 1 126 PRO n 1 127 LYS n 1 128 GLU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name HUMAN _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'HOMO SAPIENS' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'ESCHERICHIA COLI' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code TTHY_HUMAN _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_db_accession P02766 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4D7B A 2 ? 128 ? P02766 21 ? 147 ? 1 127 2 1 4D7B B 2 ? 128 ? P02766 21 ? 147 ? 1 127 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4D7B MET A 1 ? UNP P02766 ? ? 'expression tag' 0 1 2 4D7B MET B 1 ? UNP P02766 ? ? 'expression tag' 0 2 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 TCW non-polymer . Tolcapone '(3,4-dihydroxy-5-nitrophenyl)(4-methylphenyl)methanone' 'C14 H11 N O5' 273.241 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 4D7B _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number ? # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.18 _exptl_crystal.density_percent_sol 43.60 _exptl_crystal.description NONE # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector PIXEL _diffrn_detector.type 'DECTRIS PILATUS 6M' _diffrn_detector.pdbx_collection_date 2014-06-14 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9792 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ALBA BEAMLINE XALOC' _diffrn_source.pdbx_synchrotron_site ALBA _diffrn_source.pdbx_synchrotron_beamline XALOC _diffrn_source.pdbx_wavelength 0.9792 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 4D7B _reflns.observed_criterion_sigma_I 2.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 43.81 _reflns.d_resolution_high 1.15 _reflns.number_obs 86971 _reflns.number_all ? _reflns.percent_possible_obs 98.7 _reflns.pdbx_Rmerge_I_obs 0.05 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 16.00 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 6.2 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 1.15 _reflns_shell.d_res_low 1.21 _reflns_shell.percent_possible_all 96.6 _reflns_shell.Rmerge_I_obs 0.42 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 3.60 _reflns_shell.pdbx_redundancy 5.3 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 4D7B _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 82563 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 65.85 _refine.ls_d_res_high 1.15 _refine.ls_percent_reflns_obs 99.42 _refine.ls_R_factor_obs 0.17245 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.17094 _refine.ls_R_factor_R_free 0.20059 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.0 _refine.ls_number_reflns_R_free 4348 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.971 _refine.correlation_coeff_Fo_to_Fc_free 0.947 _refine.B_iso_mean 21.517 _refine.aniso_B[1][1] 0.00 _refine.aniso_B[2][2] 1.44 _refine.aniso_B[3][3] -1.44 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. HYDROGENS HAVE BEEN USED IF PRESENT IN THE INPUT U VALUES WITH TLS ADDED' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.037 _refine.pdbx_overall_ESU_R_Free 0.038 _refine.overall_SU_ML 0.026 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 1.207 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1792 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 40 _refine_hist.number_atoms_solvent 221 _refine_hist.number_atoms_total 2053 _refine_hist.d_res_high 1.15 _refine_hist.d_res_low 65.85 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.032 0.019 ? 1997 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 2.417 1.952 ? 2752 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 6.766 5.000 ? 259 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 34.266 23.750 ? 80 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 12.904 15.000 ? 302 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 17.453 15.000 ? 9 'X-RAY DIFFRACTION' ? r_chiral_restr 0.169 0.200 ? 307 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.016 0.021 ? 1567 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? r_scbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_rigid_bond_restr 12.038 3.000 ? 1985 'X-RAY DIFFRACTION' ? r_sphericity_free 36.297 5.000 ? 65 'X-RAY DIFFRACTION' ? r_sphericity_bonded 24.826 5.000 ? 2088 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.149 _refine_ls_shell.d_res_low 1.178 _refine_ls_shell.number_reflns_R_work 5405 _refine_ls_shell.R_factor_R_work 0.293 _refine_ls_shell.percent_reflns_obs 92.69 _refine_ls_shell.R_factor_R_free 0.333 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 248 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # _struct.entry_id 4D7B _struct.title 'Structure of human transthyretin in complex with Tolcapone' _struct.pdbx_descriptor TRANSTHYRETIN _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4D7B _struct_keywords.pdbx_keywords 'TRANSPORT PROTEIN' _struct_keywords.text 'TRANSPORT PROTEIN, AMYLOIDOGENESIS' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? E N N 3 ? F N N 3 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASP A 75 ? LEU A 83 ? ASP A 74 LEU A 82 1 ? 9 HELX_P HELX_P2 2 ASP B 75 ? LEU B 83 ? ASP B 74 LEU B 82 1 ? 9 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA ? 2 ? AB ? 2 ? BA ? 2 ? BB ? 2 ? AC ? 4 ? BC ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA 1 2 ? anti-parallel AB 1 2 ? anti-parallel BA 1 2 ? anti-parallel BB 1 2 ? anti-parallel AC 1 2 ? anti-parallel AC 2 3 ? anti-parallel AC 3 4 ? anti-parallel BC 1 2 ? anti-parallel BC 2 3 ? anti-parallel BC 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA 1 SER A 24 ? PRO A 25 ? SER A 23 PRO A 24 AA 2 LEU A 13 ? ASP A 19 ? LEU A 12 ASP A 18 AB 1 GLU A 55 ? LEU A 56 ? GLU A 54 LEU A 55 AB 2 LEU A 13 ? ASP A 19 ? LEU A 12 ASP A 18 BA 1 SER B 24 ? PRO B 25 ? SER B 23 PRO B 24 BA 2 LEU B 13 ? ASP B 19 ? LEU B 12 ASP B 18 BB 1 GLU B 55 ? LEU B 56 ? GLU B 54 LEU B 55 BB 2 LEU B 13 ? ASP B 19 ? LEU B 12 ASP B 18 AC 1 TRP A 42 ? LYS A 49 ? TRP A 41 LYS A 48 AC 2 ALA A 30 ? LYS A 36 ? ALA A 29 LYS A 35 AC 3 GLY A 68 ? ILE A 74 ? GLY A 67 ILE A 73 AC 4 ALA A 92 ? ALA A 98 ? ALA A 91 ALA A 97 BC 1 TRP B 42 ? LYS B 49 ? TRP B 41 LYS B 48 BC 2 ALA B 30 ? LYS B 36 ? ALA B 29 LYS B 35 BC 3 GLY B 68 ? ILE B 74 ? GLY B 67 ILE B 73 BC 4 ALA B 92 ? ALA B 98 ? ALA B 91 ALA B 97 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA 1 2 O SER A 24 ? O SER A 23 N ASP A 19 ? N ASP A 18 AB 1 2 N LEU A 56 ? N LEU A 55 O VAL A 15 ? O VAL A 14 BA 1 2 N SER B 24 ? N SER B 23 O ASP B 19 ? O ASP B 18 BB 1 2 N LEU B 56 ? N LEU B 55 O VAL B 15 ? O VAL B 14 AC 1 2 N GLY A 48 ? N GLY A 47 O VAL A 31 ? O VAL A 30 AC 2 3 N LYS A 36 ? N LYS A 35 O ILE A 69 ? O ILE A 68 AC 3 4 N ILE A 74 ? N ILE A 73 O ALA A 92 ? O ALA A 91 BC 1 2 N GLY B 48 ? N GLY B 47 O VAL B 31 ? O VAL B 30 BC 2 3 N LYS B 36 ? N LYS B 35 O ILE B 69 ? O ILE B 68 BC 3 4 N ILE B 74 ? N ILE B 73 O ALA B 92 ? O ALA B 91 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 12 'BINDING SITE FOR RESIDUE TCW A 1126' AC2 Software ? ? ? ? 12 'BINDING SITE FOR RESIDUE TCW B 1126' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 12 HOH E . ? HOH A 2101 . ? 2_555 ? 2 AC1 12 HOH E . ? HOH A 2101 . ? 1_555 ? 3 AC1 12 HOH E . ? HOH A 2102 . ? 2_555 ? 4 AC1 12 HOH E . ? HOH A 2102 . ? 1_555 ? 5 AC1 12 LYS B 16 ? LYS B 15 . ? 1_555 ? 6 AC1 12 LYS B 16 ? LYS B 15 . ? 2_555 ? 7 AC1 12 LEU B 18 ? LEU B 17 . ? 1_555 ? 8 AC1 12 ALA B 109 ? ALA B 108 . ? 1_555 ? 9 AC1 12 ALA B 109 ? ALA B 108 . ? 2_555 ? 10 AC1 12 SER B 118 ? SER B 117 . ? 1_555 ? 11 AC1 12 THR B 120 ? THR B 119 . ? 2_555 ? 12 AC1 12 HOH F . ? HOH B 2110 . ? 1_555 ? 13 AC2 12 LYS A 16 ? LYS A 15 . ? 1_555 ? 14 AC2 12 LYS A 16 ? LYS A 15 . ? 2_555 ? 15 AC2 12 ALA A 109 ? ALA A 108 . ? 1_555 ? 16 AC2 12 ALA A 109 ? ALA A 108 . ? 2_555 ? 17 AC2 12 LEU A 111 ? LEU A 110 . ? 2_555 ? 18 AC2 12 SER A 118 ? SER A 117 . ? 1_555 ? 19 AC2 12 THR A 120 ? THR A 119 . ? 2_555 ? 20 AC2 12 HOH E . ? HOH A 2004 . ? 2_555 ? 21 AC2 12 HOH E . ? HOH A 2004 . ? 1_555 ? 22 AC2 12 HOH E . ? HOH A 2090 . ? 1_555 ? 23 AC2 12 HOH E . ? HOH A 2103 . ? 2_555 ? 24 AC2 12 HOH E . ? HOH A 2103 . ? 1_555 ? # _database_PDB_matrix.entry_id 4D7B _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 4D7B _atom_sites.fract_transf_matrix[1][1] 0.011889 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.022827 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.015186 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 0 ? ? ? A . n A 1 2 GLY 2 1 ? ? ? A . n A 1 3 PRO 3 2 ? ? ? A . n A 1 4 THR 4 3 ? ? ? A . n A 1 5 GLY 5 4 ? ? ? A . n A 1 6 THR 6 5 ? ? ? A . n A 1 7 GLY 7 6 ? ? ? A . n A 1 8 GLU 8 7 ? ? ? A . n A 1 9 SER 9 8 ? ? ? A . n A 1 10 LYS 10 9 ? ? ? A . n A 1 11 CYS 11 10 10 CYS CYS A . n A 1 12 PRO 12 11 11 PRO PRO A . n A 1 13 LEU 13 12 12 LEU LEU A . n A 1 14 MET 14 13 13 MET MET A . n A 1 15 VAL 15 14 14 VAL VAL A . n A 1 16 LYS 16 15 15 LYS LYS A . n A 1 17 VAL 17 16 16 VAL VAL A . n A 1 18 LEU 18 17 17 LEU LEU A . n A 1 19 ASP 19 18 18 ASP ASP A . n A 1 20 ALA 20 19 19 ALA ALA A . n A 1 21 VAL 21 20 20 VAL VAL A . n A 1 22 ARG 22 21 21 ARG ARG A . n A 1 23 GLY 23 22 22 GLY GLY A . n A 1 24 SER 24 23 23 SER SER A . n A 1 25 PRO 25 24 24 PRO PRO A . n A 1 26 ALA 26 25 25 ALA ALA A . n A 1 27 ILE 27 26 26 ILE ILE A . n A 1 28 ASN 28 27 27 ASN ASN A . n A 1 29 VAL 29 28 28 VAL VAL A . n A 1 30 ALA 30 29 29 ALA ALA A . n A 1 31 VAL 31 30 30 VAL VAL A . n A 1 32 HIS 32 31 31 HIS HIS A . n A 1 33 VAL 33 32 32 VAL VAL A . n A 1 34 PHE 34 33 33 PHE PHE A . n A 1 35 ARG 35 34 34 ARG ARG A . n A 1 36 LYS 36 35 35 LYS LYS A . n A 1 37 ALA 37 36 36 ALA ALA A . n A 1 38 ALA 38 37 37 ALA ALA A . n A 1 39 ASP 39 38 38 ASP ASP A . n A 1 40 ASP 40 39 39 ASP ASP A . n A 1 41 THR 41 40 40 THR THR A . n A 1 42 TRP 42 41 41 TRP TRP A . n A 1 43 GLU 43 42 42 GLU GLU A . n A 1 44 PRO 44 43 43 PRO PRO A . n A 1 45 PHE 45 44 44 PHE PHE A . n A 1 46 ALA 46 45 45 ALA ALA A . n A 1 47 SER 47 46 46 SER SER A . n A 1 48 GLY 48 47 47 GLY GLY A . n A 1 49 LYS 49 48 48 LYS LYS A . n A 1 50 THR 50 49 49 THR THR A . n A 1 51 SER 51 50 50 SER SER A . n A 1 52 GLU 52 51 51 GLU GLU A . n A 1 53 SER 53 52 52 SER SER A . n A 1 54 GLY 54 53 53 GLY GLY A . n A 1 55 GLU 55 54 54 GLU GLU A . n A 1 56 LEU 56 55 55 LEU LEU A . n A 1 57 HIS 57 56 56 HIS HIS A . n A 1 58 GLY 58 57 57 GLY GLY A . n A 1 59 LEU 59 58 58 LEU LEU A . n A 1 60 THR 60 59 59 THR THR A . n A 1 61 THR 61 60 60 THR THR A . n A 1 62 GLU 62 61 61 GLU GLU A . n A 1 63 GLU 63 62 62 GLU GLU A . n A 1 64 GLU 64 63 63 GLU GLU A . n A 1 65 PHE 65 64 64 PHE PHE A . n A 1 66 VAL 66 65 65 VAL VAL A . n A 1 67 GLU 67 66 66 GLU GLU A . n A 1 68 GLY 68 67 67 GLY GLY A . n A 1 69 ILE 69 68 68 ILE ILE A . n A 1 70 TYR 70 69 69 TYR TYR A . n A 1 71 LYS 71 70 70 LYS LYS A . n A 1 72 VAL 72 71 71 VAL VAL A . n A 1 73 GLU 73 72 72 GLU GLU A . n A 1 74 ILE 74 73 73 ILE ILE A . n A 1 75 ASP 75 74 74 ASP ASP A . n A 1 76 THR 76 75 75 THR THR A . n A 1 77 LYS 77 76 76 LYS LYS A . n A 1 78 SER 78 77 77 SER SER A . n A 1 79 TYR 79 78 78 TYR TYR A . n A 1 80 TRP 80 79 79 TRP TRP A . n A 1 81 LYS 81 80 80 LYS LYS A . n A 1 82 ALA 82 81 81 ALA ALA A . n A 1 83 LEU 83 82 82 LEU LEU A . n A 1 84 GLY 84 83 83 GLY GLY A . n A 1 85 ILE 85 84 84 ILE ILE A . n A 1 86 SER 86 85 85 SER SER A . n A 1 87 PRO 87 86 86 PRO PRO A . n A 1 88 PHE 88 87 87 PHE PHE A . n A 1 89 HIS 89 88 88 HIS HIS A . n A 1 90 GLU 90 89 89 GLU GLU A . n A 1 91 HIS 91 90 90 HIS HIS A . n A 1 92 ALA 92 91 91 ALA ALA A . n A 1 93 GLU 93 92 92 GLU GLU A . n A 1 94 VAL 94 93 93 VAL VAL A . n A 1 95 VAL 95 94 94 VAL VAL A . n A 1 96 PHE 96 95 95 PHE PHE A . n A 1 97 THR 97 96 96 THR THR A . n A 1 98 ALA 98 97 97 ALA ALA A . n A 1 99 ASN 99 98 98 ASN ASN A . n A 1 100 ASP 100 99 99 ASP ASP A . n A 1 101 SER 101 100 100 SER SER A . n A 1 102 GLY 102 101 101 GLY GLY A . n A 1 103 PRO 103 102 102 PRO PRO A . n A 1 104 ARG 104 103 103 ARG ARG A . n A 1 105 ARG 105 104 104 ARG ARG A . n A 1 106 TYR 106 105 105 TYR TYR A . n A 1 107 THR 107 106 106 THR THR A . n A 1 108 ILE 108 107 107 ILE ILE A . n A 1 109 ALA 109 108 108 ALA ALA A . n A 1 110 ALA 110 109 109 ALA ALA A . n A 1 111 LEU 111 110 110 LEU LEU A . n A 1 112 LEU 112 111 111 LEU LEU A . n A 1 113 SER 113 112 112 SER SER A . n A 1 114 PRO 114 113 113 PRO PRO A . n A 1 115 TYR 115 114 114 TYR TYR A . n A 1 116 SER 116 115 115 SER SER A . n A 1 117 TYR 117 116 116 TYR TYR A . n A 1 118 SER 118 117 117 SER SER A . n A 1 119 THR 119 118 118 THR THR A . n A 1 120 THR 120 119 119 THR THR A . n A 1 121 ALA 121 120 120 ALA ALA A . n A 1 122 VAL 122 121 121 VAL VAL A . n A 1 123 VAL 123 122 122 VAL VAL A . n A 1 124 THR 124 123 123 THR THR A . n A 1 125 ASN 125 124 124 ASN ASN A . n A 1 126 PRO 126 125 125 PRO PRO A . n A 1 127 LYS 127 126 ? ? ? A . n A 1 128 GLU 128 127 ? ? ? A . n B 1 1 MET 1 0 ? ? ? B . n B 1 2 GLY 2 1 ? ? ? B . n B 1 3 PRO 3 2 ? ? ? B . n B 1 4 THR 4 3 ? ? ? B . n B 1 5 GLY 5 4 ? ? ? B . n B 1 6 THR 6 5 ? ? ? B . n B 1 7 GLY 7 6 ? ? ? B . n B 1 8 GLU 8 7 ? ? ? B . n B 1 9 SER 9 8 ? ? ? B . n B 1 10 LYS 10 9 ? ? ? B . n B 1 11 CYS 11 10 10 CYS CYS B . n B 1 12 PRO 12 11 11 PRO PRO B . n B 1 13 LEU 13 12 12 LEU LEU B . n B 1 14 MET 14 13 13 MET MET B . n B 1 15 VAL 15 14 14 VAL VAL B . n B 1 16 LYS 16 15 15 LYS LYS B . n B 1 17 VAL 17 16 16 VAL VAL B . n B 1 18 LEU 18 17 17 LEU LEU B . n B 1 19 ASP 19 18 18 ASP ASP B . n B 1 20 ALA 20 19 19 ALA ALA B . n B 1 21 VAL 21 20 20 VAL VAL B . n B 1 22 ARG 22 21 21 ARG ARG B . n B 1 23 GLY 23 22 22 GLY GLY B . n B 1 24 SER 24 23 23 SER SER B . n B 1 25 PRO 25 24 24 PRO PRO B . n B 1 26 ALA 26 25 25 ALA ALA B . n B 1 27 ILE 27 26 26 ILE ILE B . n B 1 28 ASN 28 27 27 ASN ASN B . n B 1 29 VAL 29 28 28 VAL VAL B . n B 1 30 ALA 30 29 29 ALA ALA B . n B 1 31 VAL 31 30 30 VAL VAL B . n B 1 32 HIS 32 31 31 HIS HIS B . n B 1 33 VAL 33 32 32 VAL VAL B . n B 1 34 PHE 34 33 33 PHE PHE B . n B 1 35 ARG 35 34 34 ARG ARG B . n B 1 36 LYS 36 35 35 LYS LYS B . n B 1 37 ALA 37 36 36 ALA ALA B . n B 1 38 ALA 38 37 37 ALA ALA B . n B 1 39 ASP 39 38 38 ASP ASP B . n B 1 40 ASP 40 39 39 ASP ASP B . n B 1 41 THR 41 40 40 THR THR B . n B 1 42 TRP 42 41 41 TRP TRP B . n B 1 43 GLU 43 42 42 GLU GLU B . n B 1 44 PRO 44 43 43 PRO PRO B . n B 1 45 PHE 45 44 44 PHE PHE B . n B 1 46 ALA 46 45 45 ALA ALA B . n B 1 47 SER 47 46 46 SER SER B . n B 1 48 GLY 48 47 47 GLY GLY B . n B 1 49 LYS 49 48 48 LYS LYS B . n B 1 50 THR 50 49 49 THR THR B . n B 1 51 SER 51 50 50 SER SER B . n B 1 52 GLU 52 51 51 GLU GLU B . n B 1 53 SER 53 52 52 SER SER B . n B 1 54 GLY 54 53 53 GLY GLY B . n B 1 55 GLU 55 54 54 GLU GLU B . n B 1 56 LEU 56 55 55 LEU LEU B . n B 1 57 HIS 57 56 56 HIS HIS B . n B 1 58 GLY 58 57 57 GLY GLY B . n B 1 59 LEU 59 58 58 LEU LEU B . n B 1 60 THR 60 59 59 THR THR B . n B 1 61 THR 61 60 60 THR THR B . n B 1 62 GLU 62 61 61 GLU GLU B . n B 1 63 GLU 63 62 62 GLU GLU B . n B 1 64 GLU 64 63 63 GLU GLU B . n B 1 65 PHE 65 64 64 PHE PHE B . n B 1 66 VAL 66 65 65 VAL VAL B . n B 1 67 GLU 67 66 66 GLU GLU B . n B 1 68 GLY 68 67 67 GLY GLY B . n B 1 69 ILE 69 68 68 ILE ILE B . n B 1 70 TYR 70 69 69 TYR TYR B . n B 1 71 LYS 71 70 70 LYS LYS B . n B 1 72 VAL 72 71 71 VAL VAL B . n B 1 73 GLU 73 72 72 GLU GLU B . n B 1 74 ILE 74 73 73 ILE ILE B . n B 1 75 ASP 75 74 74 ASP ASP B . n B 1 76 THR 76 75 75 THR THR B . n B 1 77 LYS 77 76 76 LYS LYS B . n B 1 78 SER 78 77 77 SER SER B . n B 1 79 TYR 79 78 78 TYR TYR B . n B 1 80 TRP 80 79 79 TRP TRP B . n B 1 81 LYS 81 80 80 LYS LYS B . n B 1 82 ALA 82 81 81 ALA ALA B . n B 1 83 LEU 83 82 82 LEU LEU B . n B 1 84 GLY 84 83 83 GLY GLY B . n B 1 85 ILE 85 84 84 ILE ILE B . n B 1 86 SER 86 85 85 SER SER B . n B 1 87 PRO 87 86 86 PRO PRO B . n B 1 88 PHE 88 87 87 PHE PHE B . n B 1 89 HIS 89 88 88 HIS HIS B . n B 1 90 GLU 90 89 89 GLU GLU B . n B 1 91 HIS 91 90 90 HIS HIS B . n B 1 92 ALA 92 91 91 ALA ALA B . n B 1 93 GLU 93 92 92 GLU GLU B . n B 1 94 VAL 94 93 93 VAL VAL B . n B 1 95 VAL 95 94 94 VAL VAL B . n B 1 96 PHE 96 95 95 PHE PHE B . n B 1 97 THR 97 96 96 THR THR B . n B 1 98 ALA 98 97 97 ALA ALA B . n B 1 99 ASN 99 98 98 ASN ASN B . n B 1 100 ASP 100 99 99 ASP ASP B . n B 1 101 SER 101 100 100 SER SER B . n B 1 102 GLY 102 101 101 GLY GLY B . n B 1 103 PRO 103 102 102 PRO PRO B . n B 1 104 ARG 104 103 103 ARG ARG B . n B 1 105 ARG 105 104 104 ARG ARG B . n B 1 106 TYR 106 105 105 TYR TYR B . n B 1 107 THR 107 106 106 THR THR B . n B 1 108 ILE 108 107 107 ILE ILE B . n B 1 109 ALA 109 108 108 ALA ALA B . n B 1 110 ALA 110 109 109 ALA ALA B . n B 1 111 LEU 111 110 110 LEU LEU B . n B 1 112 LEU 112 111 111 LEU LEU B . n B 1 113 SER 113 112 112 SER SER B . n B 1 114 PRO 114 113 113 PRO PRO B . n B 1 115 TYR 115 114 114 TYR TYR B . n B 1 116 SER 116 115 115 SER SER B . n B 1 117 TYR 117 116 116 TYR TYR B . n B 1 118 SER 118 117 117 SER SER B . n B 1 119 THR 119 118 118 THR THR B . n B 1 120 THR 120 119 119 THR THR B . n B 1 121 ALA 121 120 120 ALA ALA B . n B 1 122 VAL 122 121 121 VAL VAL B . n B 1 123 VAL 123 122 122 VAL VAL B . n B 1 124 THR 124 123 123 THR THR B . n B 1 125 ASN 125 124 124 ASN ASN B . n B 1 126 PRO 126 125 125 PRO PRO B . n B 1 127 LYS 127 126 ? ? ? B . n B 1 128 GLU 128 127 ? ? ? B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 TCW 1 1126 1126 TCW TCW A . D 2 TCW 1 1126 1126 TCW TCW B . E 3 HOH 1 2001 2001 HOH HOH A . E 3 HOH 2 2002 2002 HOH HOH A . E 3 HOH 3 2003 2003 HOH HOH A . E 3 HOH 4 2004 2004 HOH HOH A . E 3 HOH 5 2005 2005 HOH HOH A . E 3 HOH 6 2006 2006 HOH HOH A . E 3 HOH 7 2007 2007 HOH HOH A . E 3 HOH 8 2008 2008 HOH HOH A . E 3 HOH 9 2009 2009 HOH HOH A . E 3 HOH 10 2010 2010 HOH HOH A . E 3 HOH 11 2011 2011 HOH HOH A . E 3 HOH 12 2012 2012 HOH HOH A . E 3 HOH 13 2013 2013 HOH HOH A . E 3 HOH 14 2014 2014 HOH HOH A . E 3 HOH 15 2015 2015 HOH HOH A . E 3 HOH 16 2016 2016 HOH HOH A . E 3 HOH 17 2017 2017 HOH HOH A . E 3 HOH 18 2018 2018 HOH HOH A . E 3 HOH 19 2019 2019 HOH HOH A . E 3 HOH 20 2020 2020 HOH HOH A . E 3 HOH 21 2021 2021 HOH HOH A . E 3 HOH 22 2022 2022 HOH HOH A . E 3 HOH 23 2023 2023 HOH HOH A . E 3 HOH 24 2024 2024 HOH HOH A . E 3 HOH 25 2025 2025 HOH HOH A . E 3 HOH 26 2026 2026 HOH HOH A . E 3 HOH 27 2027 2027 HOH HOH A . E 3 HOH 28 2028 2028 HOH HOH A . E 3 HOH 29 2029 2029 HOH HOH A . E 3 HOH 30 2030 2030 HOH HOH A . E 3 HOH 31 2031 2031 HOH HOH A . E 3 HOH 32 2032 2032 HOH HOH A . E 3 HOH 33 2033 2033 HOH HOH A . E 3 HOH 34 2034 2034 HOH HOH A . E 3 HOH 35 2035 2035 HOH HOH A . E 3 HOH 36 2036 2036 HOH HOH A . E 3 HOH 37 2037 2037 HOH HOH A . E 3 HOH 38 2038 2038 HOH HOH A . E 3 HOH 39 2039 2039 HOH HOH A . E 3 HOH 40 2040 2040 HOH HOH A . E 3 HOH 41 2041 2041 HOH HOH A . E 3 HOH 42 2042 2042 HOH HOH A . E 3 HOH 43 2043 2043 HOH HOH A . E 3 HOH 44 2044 2044 HOH HOH A . E 3 HOH 45 2045 2045 HOH HOH A . E 3 HOH 46 2046 2046 HOH HOH A . E 3 HOH 47 2047 2047 HOH HOH A . E 3 HOH 48 2048 2048 HOH HOH A . E 3 HOH 49 2049 2049 HOH HOH A . E 3 HOH 50 2050 2050 HOH HOH A . E 3 HOH 51 2051 2051 HOH HOH A . E 3 HOH 52 2052 2052 HOH HOH A . E 3 HOH 53 2053 2053 HOH HOH A . E 3 HOH 54 2054 2054 HOH HOH A . E 3 HOH 55 2055 2055 HOH HOH A . E 3 HOH 56 2056 2056 HOH HOH A . E 3 HOH 57 2057 2057 HOH HOH A . E 3 HOH 58 2058 2058 HOH HOH A . E 3 HOH 59 2059 2059 HOH HOH A . E 3 HOH 60 2060 2060 HOH HOH A . E 3 HOH 61 2061 2061 HOH HOH A . E 3 HOH 62 2062 2062 HOH HOH A . E 3 HOH 63 2063 2063 HOH HOH A . E 3 HOH 64 2064 2064 HOH HOH A . E 3 HOH 65 2065 2065 HOH HOH A . E 3 HOH 66 2066 2066 HOH HOH A . E 3 HOH 67 2067 2067 HOH HOH A . E 3 HOH 68 2068 2068 HOH HOH A . E 3 HOH 69 2069 2069 HOH HOH A . E 3 HOH 70 2070 2070 HOH HOH A . E 3 HOH 71 2071 2071 HOH HOH A . E 3 HOH 72 2072 2072 HOH HOH A . E 3 HOH 73 2073 2073 HOH HOH A . E 3 HOH 74 2074 2074 HOH HOH A . E 3 HOH 75 2075 2075 HOH HOH A . E 3 HOH 76 2076 2076 HOH HOH A . E 3 HOH 77 2077 2077 HOH HOH A . E 3 HOH 78 2078 2078 HOH HOH A . E 3 HOH 79 2079 2079 HOH HOH A . E 3 HOH 80 2080 2080 HOH HOH A . E 3 HOH 81 2081 2081 HOH HOH A . E 3 HOH 82 2082 2082 HOH HOH A . E 3 HOH 83 2083 2083 HOH HOH A . E 3 HOH 84 2084 2084 HOH HOH A . E 3 HOH 85 2085 2085 HOH HOH A . E 3 HOH 86 2086 2086 HOH HOH A . E 3 HOH 87 2087 2087 HOH HOH A . E 3 HOH 88 2088 2088 HOH HOH A . E 3 HOH 89 2089 2089 HOH HOH A . E 3 HOH 90 2090 2090 HOH HOH A . E 3 HOH 91 2091 2091 HOH HOH A . E 3 HOH 92 2092 2092 HOH HOH A . E 3 HOH 93 2093 2093 HOH HOH A . E 3 HOH 94 2094 2094 HOH HOH A . E 3 HOH 95 2095 2095 HOH HOH A . E 3 HOH 96 2096 2096 HOH HOH A . E 3 HOH 97 2097 2097 HOH HOH A . E 3 HOH 98 2098 2098 HOH HOH A . E 3 HOH 99 2099 2099 HOH HOH A . E 3 HOH 100 2100 2100 HOH HOH A . E 3 HOH 101 2101 2101 HOH HOH A . E 3 HOH 102 2102 2102 HOH HOH A . E 3 HOH 103 2103 2103 HOH HOH A . F 3 HOH 1 2001 2001 HOH HOH B . F 3 HOH 2 2002 2002 HOH HOH B . F 3 HOH 3 2003 2003 HOH HOH B . F 3 HOH 4 2004 2004 HOH HOH B . F 3 HOH 5 2005 2005 HOH HOH B . F 3 HOH 6 2006 2006 HOH HOH B . F 3 HOH 7 2007 2007 HOH HOH B . F 3 HOH 8 2008 2008 HOH HOH B . F 3 HOH 9 2009 2009 HOH HOH B . F 3 HOH 10 2010 2010 HOH HOH B . F 3 HOH 11 2011 2011 HOH HOH B . F 3 HOH 12 2012 2012 HOH HOH B . F 3 HOH 13 2013 2013 HOH HOH B . F 3 HOH 14 2014 2014 HOH HOH B . F 3 HOH 15 2015 2015 HOH HOH B . F 3 HOH 16 2016 2016 HOH HOH B . F 3 HOH 17 2017 2017 HOH HOH B . F 3 HOH 18 2018 2018 HOH HOH B . F 3 HOH 19 2019 2019 HOH HOH B . F 3 HOH 20 2020 2020 HOH HOH B . F 3 HOH 21 2021 2021 HOH HOH B . F 3 HOH 22 2022 2022 HOH HOH B . F 3 HOH 23 2023 2023 HOH HOH B . F 3 HOH 24 2024 2024 HOH HOH B . F 3 HOH 25 2025 2025 HOH HOH B . F 3 HOH 26 2026 2026 HOH HOH B . F 3 HOH 27 2027 2027 HOH HOH B . F 3 HOH 28 2028 2028 HOH HOH B . F 3 HOH 29 2029 2029 HOH HOH B . F 3 HOH 30 2030 2030 HOH HOH B . F 3 HOH 31 2031 2031 HOH HOH B . F 3 HOH 32 2032 2032 HOH HOH B . F 3 HOH 33 2033 2033 HOH HOH B . F 3 HOH 34 2034 2034 HOH HOH B . F 3 HOH 35 2035 2035 HOH HOH B . F 3 HOH 36 2036 2036 HOH HOH B . F 3 HOH 37 2037 2037 HOH HOH B . F 3 HOH 38 2038 2038 HOH HOH B . F 3 HOH 39 2039 2039 HOH HOH B . F 3 HOH 40 2040 2040 HOH HOH B . F 3 HOH 41 2041 2041 HOH HOH B . F 3 HOH 42 2042 2042 HOH HOH B . F 3 HOH 43 2043 2043 HOH HOH B . F 3 HOH 44 2044 2044 HOH HOH B . F 3 HOH 45 2045 2045 HOH HOH B . F 3 HOH 46 2046 2046 HOH HOH B . F 3 HOH 47 2047 2047 HOH HOH B . F 3 HOH 48 2048 2048 HOH HOH B . F 3 HOH 49 2049 2049 HOH HOH B . F 3 HOH 50 2050 2050 HOH HOH B . F 3 HOH 51 2051 2051 HOH HOH B . F 3 HOH 52 2052 2052 HOH HOH B . F 3 HOH 53 2053 2053 HOH HOH B . F 3 HOH 54 2054 2054 HOH HOH B . F 3 HOH 55 2055 2055 HOH HOH B . F 3 HOH 56 2056 2056 HOH HOH B . F 3 HOH 57 2057 2057 HOH HOH B . F 3 HOH 58 2058 2058 HOH HOH B . F 3 HOH 59 2059 2059 HOH HOH B . F 3 HOH 60 2060 2060 HOH HOH B . F 3 HOH 61 2061 2061 HOH HOH B . F 3 HOH 62 2062 2062 HOH HOH B . F 3 HOH 63 2063 2063 HOH HOH B . F 3 HOH 64 2064 2064 HOH HOH B . F 3 HOH 65 2065 2065 HOH HOH B . F 3 HOH 66 2066 2066 HOH HOH B . F 3 HOH 67 2067 2067 HOH HOH B . F 3 HOH 68 2068 2068 HOH HOH B . F 3 HOH 69 2069 2069 HOH HOH B . F 3 HOH 70 2070 2070 HOH HOH B . F 3 HOH 71 2071 2071 HOH HOH B . F 3 HOH 72 2072 2072 HOH HOH B . F 3 HOH 73 2073 2073 HOH HOH B . F 3 HOH 74 2074 2074 HOH HOH B . F 3 HOH 75 2075 2075 HOH HOH B . F 3 HOH 76 2076 2076 HOH HOH B . F 3 HOH 77 2077 2077 HOH HOH B . F 3 HOH 78 2078 2078 HOH HOH B . F 3 HOH 79 2079 2079 HOH HOH B . F 3 HOH 80 2080 2080 HOH HOH B . F 3 HOH 81 2081 2081 HOH HOH B . F 3 HOH 82 2082 2082 HOH HOH B . F 3 HOH 83 2083 2083 HOH HOH B . F 3 HOH 84 2084 2084 HOH HOH B . F 3 HOH 85 2085 2085 HOH HOH B . F 3 HOH 86 2086 2086 HOH HOH B . F 3 HOH 87 2087 2087 HOH HOH B . F 3 HOH 88 2088 2088 HOH HOH B . F 3 HOH 89 2089 2089 HOH HOH B . F 3 HOH 90 2090 2090 HOH HOH B . F 3 HOH 91 2091 2091 HOH HOH B . F 3 HOH 92 2092 2092 HOH HOH B . F 3 HOH 93 2093 2093 HOH HOH B . F 3 HOH 94 2094 2094 HOH HOH B . F 3 HOH 95 2095 2095 HOH HOH B . F 3 HOH 96 2096 2096 HOH HOH B . F 3 HOH 97 2097 2097 HOH HOH B . F 3 HOH 98 2098 2098 HOH HOH B . F 3 HOH 99 2099 2099 HOH HOH B . F 3 HOH 100 2100 2100 HOH HOH B . F 3 HOH 101 2101 2101 HOH HOH B . F 3 HOH 102 2102 2102 HOH HOH B . F 3 HOH 103 2103 2103 HOH HOH B . F 3 HOH 104 2104 2104 HOH HOH B . F 3 HOH 105 2105 2105 HOH HOH B . F 3 HOH 106 2106 2106 HOH HOH B . F 3 HOH 107 2107 2107 HOH HOH B . F 3 HOH 108 2108 2108 HOH HOH B . F 3 HOH 109 2109 2109 HOH HOH B . F 3 HOH 110 2110 2110 HOH HOH B . F 3 HOH 111 2111 2111 HOH HOH B . F 3 HOH 112 2112 2112 HOH HOH B . F 3 HOH 113 2113 2113 HOH HOH B . F 3 HOH 114 2114 2114 HOH HOH B . F 3 HOH 115 2115 2115 HOH HOH B . F 3 HOH 116 2116 2116 HOH HOH B . F 3 HOH 117 2117 2117 HOH HOH B . F 3 HOH 118 2118 2118 HOH HOH B . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 6420 ? 1 MORE -40.5 ? 1 'SSA (A^2)' 19170 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_555 -x,-y,z -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 B TCW 1126 ? D TCW . 2 1 A HOH 2095 ? E HOH . 3 1 B HOH 2114 ? F HOH . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2016-01-20 2 'Structure model' 1 1 2016-02-24 3 'Structure model' 1 2 2016-03-02 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined -12.9642 0.6310 -6.4572 0.0232 0.0123 0.0331 0.0007 0.0007 -0.0005 0.1257 0.0770 0.0747 0.0845 -0.0576 -0.0351 -0.0045 -0.0111 -0.0011 -0.0016 -0.0002 -0.0042 -0.0006 -0.0064 0.0047 'X-RAY DIFFRACTION' 2 ? refined -12.8529 -1.4368 -26.4952 0.0240 0.0154 0.0339 0.0001 0.0001 -0.0005 0.1093 0.0446 0.1293 -0.0659 0.0889 -0.0662 -0.0069 0.0118 -0.0002 0.0059 0.0010 -0.0041 -0.0031 -0.0131 0.0060 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 B 10 ? ? B 125 ? ? ? ? 'X-RAY DIFFRACTION' 2 2 A 10 ? ? A 125 ? ? ? ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.6.0117 ? 1 XDS 'data reduction' . ? 2 SCALA 'data scaling' . ? 3 MOLREP phasing . ? 4 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A HOH 2061 ? ? O A HOH 2063 ? ? 1.98 2 1 O B HOH 2046 ? ? O B HOH 2047 ? ? 2.06 3 1 CE B LYS 48 ? ? O B HOH 2050 ? ? 2.10 4 1 O B HOH 2010 ? ? O B HOH 2014 ? ? 2.17 5 1 O B HOH 2060 ? ? O B HOH 2061 ? ? 2.18 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 CD A GLU 89 ? ? OE2 A GLU 89 ? ? 1.171 1.252 -0.081 0.011 N 2 1 CB A ASP 99 ? ? CG A ASP 99 ? ? 1.687 1.513 0.174 0.021 N 3 1 CG A ASP 99 ? ? OD1 A ASP 99 ? ? 1.407 1.249 0.158 0.023 N 4 1 C A ASP 99 ? ? O A ASP 99 ? ? 1.442 1.229 0.213 0.019 N 5 1 CZ A TYR 116 ? ? CE2 A TYR 116 ? ? 1.475 1.381 0.094 0.013 N 6 1 CA A SER 117 ? C CB A SER 117 ? C 1.642 1.525 0.117 0.015 N 7 1 CB A SER 117 ? C OG A SER 117 ? C 1.314 1.418 -0.104 0.013 N 8 1 CG A ASN 124 ? ? OD1 A ASN 124 ? ? 1.372 1.235 0.137 0.022 N 9 1 CD B GLU 89 ? ? OE2 B GLU 89 ? ? 1.167 1.252 -0.085 0.011 N 10 1 CB B ASP 99 ? ? CG B ASP 99 ? ? 1.743 1.513 0.230 0.021 N 11 1 CG B ASP 99 ? ? OD1 B ASP 99 ? ? 1.449 1.249 0.200 0.023 N 12 1 CA B ASP 99 ? ? C B ASP 99 ? ? 1.692 1.525 0.167 0.026 N 13 1 CB B SER 100 ? ? OG B SER 100 ? ? 1.501 1.418 0.083 0.013 N 14 1 C B SER 100 ? ? N B GLY 101 ? ? 1.484 1.336 0.148 0.023 Y 15 1 CE1 B TYR 116 ? ? CZ B TYR 116 ? ? 1.489 1.381 0.108 0.013 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CB A LYS 48 ? ? CG A LYS 48 ? ? CD A LYS 48 ? ? 129.05 111.60 17.45 2.60 N 2 1 CB A ASP 99 ? ? CG A ASP 99 ? ? OD1 A ASP 99 ? ? 129.93 118.30 11.63 0.90 N 3 1 CA A THR 118 ? ? CB A THR 118 ? ? CG2 A THR 118 ? ? 122.36 112.40 9.96 1.40 N 4 1 CA A THR 123 ? ? C A THR 123 ? ? N A ASN 124 ? ? 103.03 117.20 -14.17 2.20 Y 5 1 CB B PHE 64 ? ? CG B PHE 64 ? ? CD2 B PHE 64 ? ? 115.45 120.80 -5.35 0.70 N 6 1 CB B PHE 64 ? ? CG B PHE 64 ? ? CD1 B PHE 64 ? ? 125.78 120.80 4.98 0.70 N 7 1 CB B PHE 87 ? ? CG B PHE 87 ? ? CD1 B PHE 87 ? ? 115.78 120.80 -5.02 0.70 N 8 1 CB B ASP 99 ? ? CG B ASP 99 ? ? OD1 B ASP 99 ? ? 133.72 118.30 15.42 0.90 N 9 1 CB B ASP 99 ? ? CG B ASP 99 ? ? OD2 B ASP 99 ? ? 107.66 118.30 -10.64 0.90 N 10 1 O B SER 100 ? ? C B SER 100 ? ? N B GLY 101 ? ? 110.42 123.20 -12.78 1.70 Y 11 1 CB B TYR 116 ? ? CG B TYR 116 ? ? CD2 B TYR 116 ? ? 117.11 121.00 -3.89 0.60 N 12 1 CB B TYR 116 ? ? CG B TYR 116 ? ? CD1 B TYR 116 ? ? 124.80 121.00 3.80 0.60 N 13 1 CG B TYR 116 ? ? CD2 B TYR 116 ? ? CE2 B TYR 116 ? ? 126.33 121.30 5.03 0.80 N 14 1 CA B THR 119 ? B CB B THR 119 ? B CG2 B THR 119 ? B 103.83 112.40 -8.57 1.40 N # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id PHE _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 44 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi -127.50 _pdbx_validate_torsion.psi -55.43 # _pdbx_validate_main_chain_plane.id 1 _pdbx_validate_main_chain_plane.PDB_model_num 1 _pdbx_validate_main_chain_plane.auth_comp_id SER _pdbx_validate_main_chain_plane.auth_asym_id B _pdbx_validate_main_chain_plane.auth_seq_id 100 _pdbx_validate_main_chain_plane.PDB_ins_code ? _pdbx_validate_main_chain_plane.label_alt_id ? _pdbx_validate_main_chain_plane.improper_torsion_angle 10.58 # loop_ _pdbx_distant_solvent_atoms.id _pdbx_distant_solvent_atoms.PDB_model_num _pdbx_distant_solvent_atoms.auth_atom_id _pdbx_distant_solvent_atoms.label_alt_id _pdbx_distant_solvent_atoms.auth_asym_id _pdbx_distant_solvent_atoms.auth_comp_id _pdbx_distant_solvent_atoms.auth_seq_id _pdbx_distant_solvent_atoms.PDB_ins_code _pdbx_distant_solvent_atoms.neighbor_macromolecule_distance _pdbx_distant_solvent_atoms.neighbor_ligand_distance 1 1 O ? A HOH 2028 ? 6.41 . 2 1 O ? B HOH 2008 ? 5.87 . # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 0 ? A MET 1 2 1 Y 1 A GLY 1 ? A GLY 2 3 1 Y 1 A PRO 2 ? A PRO 3 4 1 Y 1 A THR 3 ? A THR 4 5 1 Y 1 A GLY 4 ? A GLY 5 6 1 Y 1 A THR 5 ? A THR 6 7 1 Y 1 A GLY 6 ? A GLY 7 8 1 Y 1 A GLU 7 ? A GLU 8 9 1 Y 1 A SER 8 ? A SER 9 10 1 Y 1 A LYS 9 ? A LYS 10 11 1 Y 1 A LYS 126 ? A LYS 127 12 1 Y 1 A GLU 127 ? A GLU 128 13 1 Y 1 B MET 0 ? B MET 1 14 1 Y 1 B GLY 1 ? B GLY 2 15 1 Y 1 B PRO 2 ? B PRO 3 16 1 Y 1 B THR 3 ? B THR 4 17 1 Y 1 B GLY 4 ? B GLY 5 18 1 Y 1 B THR 5 ? B THR 6 19 1 Y 1 B GLY 6 ? B GLY 7 20 1 Y 1 B GLU 7 ? B GLU 8 21 1 Y 1 B SER 8 ? B SER 9 22 1 Y 1 B LYS 9 ? B LYS 10 23 1 Y 1 B LYS 126 ? B LYS 127 24 1 Y 1 B GLU 127 ? B GLU 128 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 Tolcapone TCW 3 water HOH #