HEADER OXIDOREDUCTASE 25-NOV-14 4D7J TITLE STRUCTURE OF BACILLUS SUBTILIS NITRIC OXIDE SYNTHASE IN COMPLEX WITH TITLE 2 6-(4-(((3-FLUOROPHENETHYL)AMINO)METHYL)PHENYL)-4-METHYLPYRIDIN-2- TITLE 3 AMINE COMPND MOL_ID: 1; COMPND 2 MOLECULE: NITRIC OXIDE SYNTHASE OXYGENASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: NOSOXY-LIKE PROTEIN, NITRIC OXIDE SYNTHASE; COMPND 5 EC: 1.14.13.165; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACILLUS SUBTILIS SUBSP. SUBTILIS STR. 168; SOURCE 3 ORGANISM_TAXID: 224308; SOURCE 4 ATCC: 23857; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_VECTOR: PET28A KEYWDS OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR J.K.HOLDEN,T.L.POULOS REVDAT 5 20-DEC-23 4D7J 1 REMARK REVDAT 4 06-FEB-19 4D7J 1 REMARK REVDAT 3 30-JAN-19 4D7J 1 REMARK REVDAT 2 15-JUL-15 4D7J 1 JRNL REVDAT 1 01-JUL-15 4D7J 0 JRNL AUTH J.K.HOLDEN,S.KANG,F.C.BEASLEY,M.A.CINELLI,H.LI,S.G.ROY, JRNL AUTH 2 D.DEJAM,A.L.EDINGER,V.NIZET,R.B.SILVERMAN,T.L.POULOS JRNL TITL NITRIC OXIDE SYNTHASE AS A TARGET FOR METHICILLIN-RESISTANT JRNL TITL 2 STAPHYLOCOCCUS AUREUS. JRNL REF CHEM.BIOL. V. 22 785 2015 JRNL REFN ISSN 1074-5521 JRNL PMID 26091171 JRNL DOI 10.1016/J.CHEMBIOL.2015.05.013 REMARK 2 REMARK 2 RESOLUTION. 1.55 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.55 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 37.06 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 70050 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.175 REMARK 3 R VALUE (WORKING SET) : 0.173 REMARK 3 FREE R VALUE : 0.204 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 3549 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 37.0717 - 4.5296 1.00 2871 162 0.1549 0.1822 REMARK 3 2 4.5296 - 3.5962 0.99 2744 146 0.1333 0.1550 REMARK 3 3 3.5962 - 3.1419 1.00 2717 141 0.1534 0.1649 REMARK 3 4 3.1419 - 2.8548 1.00 2704 129 0.1582 0.1861 REMARK 3 5 2.8548 - 2.6502 1.00 2728 127 0.1622 0.2443 REMARK 3 6 2.6502 - 2.4940 1.00 2656 148 0.1600 0.1909 REMARK 3 7 2.4940 - 2.3691 1.00 2642 172 0.1617 0.2103 REMARK 3 8 2.3691 - 2.2660 1.00 2661 155 0.1662 0.2250 REMARK 3 9 2.2660 - 2.1788 0.99 2643 143 0.1604 0.1996 REMARK 3 10 2.1788 - 2.1036 1.00 2678 132 0.1715 0.1857 REMARK 3 11 2.1036 - 2.0378 1.00 2675 129 0.1847 0.2370 REMARK 3 12 2.0378 - 1.9796 1.00 2665 136 0.1849 0.1865 REMARK 3 13 1.9796 - 1.9275 0.99 2621 155 0.1847 0.2207 REMARK 3 14 1.9275 - 1.8805 1.00 2647 144 0.1984 0.2458 REMARK 3 15 1.8805 - 1.8377 1.00 2624 165 0.2081 0.2379 REMARK 3 16 1.8377 - 1.7986 1.00 2625 146 0.2176 0.2531 REMARK 3 17 1.7986 - 1.7626 1.00 2639 141 0.2399 0.2805 REMARK 3 18 1.7626 - 1.7294 1.00 2659 121 0.2450 0.2695 REMARK 3 19 1.7294 - 1.6985 1.00 2591 144 0.3243 0.3729 REMARK 3 20 1.6985 - 1.6697 0.99 2672 137 0.3538 0.3692 REMARK 3 21 1.6697 - 1.6428 0.99 2624 133 0.3221 0.3300 REMARK 3 22 1.6428 - 1.6175 0.99 2616 142 0.3373 0.3275 REMARK 3 23 1.6175 - 1.5937 0.99 2646 121 0.3394 0.3344 REMARK 3 24 1.5937 - 1.5712 0.99 2584 130 0.3652 0.3947 REMARK 3 25 1.5712 - 1.5500 0.98 2569 150 0.3923 0.4091 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.190 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 25.620 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 24.96 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 3152 REMARK 3 ANGLE : 1.193 4279 REMARK 3 CHIRALITY : 0.075 440 REMARK 3 PLANARITY : 0.005 544 REMARK 3 DIHEDRAL : 13.618 1171 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 5 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 2 THROUGH 21 ) REMARK 3 ORIGIN FOR THE GROUP (A): -3.2803 25.6245 -1.0088 REMARK 3 T TENSOR REMARK 3 T11: 0.5648 T22: 0.4500 REMARK 3 T33: 0.2412 T12: -0.0494 REMARK 3 T13: -0.1518 T23: 0.0027 REMARK 3 L TENSOR REMARK 3 L11: 9.5147 L22: 6.4375 REMARK 3 L33: 2.1104 L12: -1.2170 REMARK 3 L13: -3.9189 L23: 0.9004 REMARK 3 S TENSOR REMARK 3 S11: 0.0936 S12: 1.0914 S13: -0.5028 REMARK 3 S21: -1.1365 S22: 0.2619 S23: 0.2137 REMARK 3 S31: 0.3529 S32: -0.5417 S33: -0.4348 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 22 THROUGH 134 ) REMARK 3 ORIGIN FOR THE GROUP (A): 2.7024 29.9971 14.5526 REMARK 3 T TENSOR REMARK 3 T11: 0.2335 T22: 0.1671 REMARK 3 T33: 0.1706 T12: -0.0312 REMARK 3 T13: -0.0213 T23: 0.0594 REMARK 3 L TENSOR REMARK 3 L11: 1.9151 L22: 1.8305 REMARK 3 L33: 0.9572 L12: 0.4356 REMARK 3 L13: 0.0039 L23: -0.0400 REMARK 3 S TENSOR REMARK 3 S11: -0.1240 S12: 0.3457 S13: 0.3514 REMARK 3 S21: -0.4088 S22: 0.1128 S23: 0.0889 REMARK 3 S31: -0.2083 S32: 0.0031 S33: 0.0237 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 135 THROUGH 171 ) REMARK 3 ORIGIN FOR THE GROUP (A): 25.0517 18.4086 30.4927 REMARK 3 T TENSOR REMARK 3 T11: 0.1076 T22: 0.1618 REMARK 3 T33: 0.2842 T12: 0.0057 REMARK 3 T13: 0.0108 T23: -0.0023 REMARK 3 L TENSOR REMARK 3 L11: 4.1801 L22: 2.4278 REMARK 3 L33: 7.8274 L12: -0.0704 REMARK 3 L13: -0.2396 L23: 1.0690 REMARK 3 S TENSOR REMARK 3 S11: -0.0848 S12: 0.1540 S13: -0.3794 REMARK 3 S21: -0.0757 S22: -0.0640 S23: -0.5222 REMARK 3 S31: 0.2458 S32: 0.3551 S33: 0.1196 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 172 THROUGH 294 ) REMARK 3 ORIGIN FOR THE GROUP (A): 9.7103 15.4386 32.8146 REMARK 3 T TENSOR REMARK 3 T11: 0.0924 T22: 0.1331 REMARK 3 T33: 0.1471 T12: -0.0058 REMARK 3 T13: -0.0072 T23: -0.0285 REMARK 3 L TENSOR REMARK 3 L11: 0.6619 L22: 1.7620 REMARK 3 L33: 0.9734 L12: 0.1362 REMARK 3 L13: 0.0157 L23: -0.7011 REMARK 3 S TENSOR REMARK 3 S11: -0.0222 S12: 0.0148 S13: 0.0183 REMARK 3 S21: -0.0070 S22: 0.0088 S23: -0.1352 REMARK 3 S31: -0.0528 S32: 0.0821 S33: 0.0251 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 295 THROUGH 363 ) REMARK 3 ORIGIN FOR THE GROUP (A): -4.0012 11.4498 20.5258 REMARK 3 T TENSOR REMARK 3 T11: 0.1429 T22: 0.1367 REMARK 3 T33: 0.1596 T12: -0.0148 REMARK 3 T13: -0.0378 T23: -0.0033 REMARK 3 L TENSOR REMARK 3 L11: 0.8640 L22: 1.9250 REMARK 3 L33: 1.9760 L12: 0.1267 REMARK 3 L13: -0.4076 L23: -0.1067 REMARK 3 S TENSOR REMARK 3 S11: -0.0164 S12: 0.1248 S13: 0.0022 REMARK 3 S21: -0.3146 S22: 0.1077 S23: 0.2291 REMARK 3 S31: 0.0391 S32: -0.1786 S33: -0.0660 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4D7J COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 25-NOV-14. REMARK 100 THE DEPOSITION ID IS D_1290062381. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 02-APR-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL11-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.91837 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : RH COATED FOCUSING MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 70341 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.550 REMARK 200 RESOLUTION RANGE LOW (A) : 37.060 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 6.500 REMARK 200 R MERGE (I) : 0.05000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 18.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.55 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.58 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.8 REMARK 200 DATA REDUNDANCY IN SHELL : 6.70 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 0.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4LWA REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 57.14 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.87 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 60 MM BIS-TRIS METHANE, 40 MM CITRIC REMARK 280 ACID, 20% PEG3350, 1.9% 1-PROPANOL, PH 7.6, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 40.26550 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 47.40050 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 40.26550 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 47.40050 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 9490 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 30860 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -68.4 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A2366 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 117 -79.32 -99.73 REMARK 500 LYS A 118 38.17 -95.13 REMARK 500 ASP A 139 39.06 22.52 REMARK 500 ALA A 233 71.18 -159.19 REMARK 500 ARG A 247 -64.58 -131.37 REMARK 500 ARG A 254 -127.26 -115.43 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A2130 DISTANCE = 6.30 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEM A 901 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 66 SG REMARK 620 2 HEM A 901 NA 98.3 REMARK 620 3 HEM A 901 NB 95.1 86.8 REMARK 620 4 HEM A 901 NC 95.3 166.1 89.2 REMARK 620 5 HEM A 901 ND 100.8 89.2 164.0 91.0 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HEM A 901 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE H4B A 902 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 903 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 0GD A 904 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 906 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 907 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 908 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG A 909 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE POL A 911 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 912 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4D7H RELATED DB: PDB REMARK 900 STRUCTURE OF BACILLUS SUBTILIS NITRIC OXIDE SYNTHASE IN COMPLEX REMARK 900 WITH 7-(2-(3-(3-FLUOROPHENYL(PROPYLAMINO) ETHYL))QUINOLIN-2- AMINE REMARK 900 RELATED ID: 4D7I RELATED DB: PDB REMARK 900 STRUCTURE OF BACILLUS SUBTILIS NITRIC OXIDE SYNTHASE I218V IN REMARK 900 COMPLEX WITH 6-(4-(((3-FLUOROPHENETHYL)AMINO )METHYL)PHENYL)-4- REMARK 900 METHYLPYRIDIN-2-AMINE REMARK 999 REMARK 999 SEQUENCE REMARK 999 SURFACE ENTROPY MUTATIONS E25A, E26A, E316A INTRODUCED. DBREF 4D7J A 1 363 UNP O34453 NOSO_BACSU 1 363 SEQADV 4D7J ALA A 25 UNP O34453 GLU 25 ENGINEERED MUTATION SEQADV 4D7J ALA A 26 UNP O34453 GLU 26 ENGINEERED MUTATION SEQADV 4D7J ALA A 316 UNP O34453 GLU 316 ENGINEERED MUTATION SEQRES 1 A 363 MET GLU GLU LYS GLU ILE LEU TRP ASN GLU ALA LYS ALA SEQRES 2 A 363 PHE ILE ALA ALA CYS TYR GLN GLU LEU GLY LYS ALA ALA SEQRES 3 A 363 GLU VAL LYS ASP ARG LEU ALA ASP ILE LYS SER GLU ILE SEQRES 4 A 363 ASP LEU THR GLY SER TYR VAL HIS THR LYS GLU GLU LEU SEQRES 5 A 363 GLU HIS GLY ALA LYS MET ALA TRP ARG ASN SER ASN ARG SEQRES 6 A 363 CYS ILE GLY ARG LEU PHE TRP ASN SER LEU ASN VAL ILE SEQRES 7 A 363 ASP ARG ARG ASP VAL ARG THR LYS GLU GLU VAL ARG ASP SEQRES 8 A 363 ALA LEU PHE HIS HIS ILE GLU THR ALA THR ASN ASN GLY SEQRES 9 A 363 LYS ILE ARG PRO THR ILE THR ILE PHE PRO PRO GLU GLU SEQRES 10 A 363 LYS GLY GLU LYS GLN VAL GLU ILE TRP ASN HIS GLN LEU SEQRES 11 A 363 ILE ARG TYR ALA GLY TYR GLU SER ASP GLY GLU ARG ILE SEQRES 12 A 363 GLY ASP PRO ALA SER CYS SER LEU THR ALA ALA CYS GLU SEQRES 13 A 363 GLU LEU GLY TRP ARG GLY GLU ARG THR ASP PHE ASP LEU SEQRES 14 A 363 LEU PRO LEU ILE PHE ARG MET LYS GLY ASP GLU GLN PRO SEQRES 15 A 363 VAL TRP TYR GLU LEU PRO ARG SER LEU VAL ILE GLU VAL SEQRES 16 A 363 PRO ILE THR HIS PRO ASP ILE GLU ALA PHE SER ASP LEU SEQRES 17 A 363 GLU LEU LYS TRP TYR GLY VAL PRO ILE ILE SER ASP MET SEQRES 18 A 363 LYS LEU GLU VAL GLY GLY ILE HIS TYR ASN ALA ALA PRO SEQRES 19 A 363 PHE ASN GLY TRP TYR MET GLY THR GLU ILE GLY ALA ARG SEQRES 20 A 363 ASN LEU ALA ASP GLU LYS ARG TYR ASP LYS LEU LYS LYS SEQRES 21 A 363 VAL ALA SER VAL ILE GLY ILE ALA ALA ASP TYR ASN THR SEQRES 22 A 363 ASP LEU TRP LYS ASP GLN ALA LEU VAL GLU LEU ASN LYS SEQRES 23 A 363 ALA VAL LEU HIS SER TYR LYS LYS GLN GLY VAL SER ILE SEQRES 24 A 363 VAL ASP HIS HIS THR ALA ALA SER GLN PHE LYS ARG PHE SEQRES 25 A 363 GLU GLU GLN ALA GLU GLU ALA GLY ARG LYS LEU THR GLY SEQRES 26 A 363 ASP TRP THR TRP LEU ILE PRO PRO ILE SER PRO ALA ALA SEQRES 27 A 363 THR HIS ILE PHE HIS ARG SER TYR ASP ASN SER ILE VAL SEQRES 28 A 363 LYS PRO ASN TYR PHE TYR GLN ASP LYS PRO TYR GLU HET HEM A 901 43 HET H4B A 902 17 HET CL A 903 1 HET 0GD A 904 25 HET GOL A 906 6 HET GOL A 907 6 HET GOL A 908 6 HET PEG A 909 7 HET POL A 911 4 HET GOL A 912 6 HETNAM HEM PROTOPORPHYRIN IX CONTAINING FE HETNAM H4B 5,6,7,8-TETRAHYDROBIOPTERIN HETNAM CL CHLORIDE ION HETNAM 0GD 6-[4-({[2-(3-FLUOROPHENYL)ETHYL]AMINO}METHYL)PHENYL]-4- HETNAM 2 0GD METHYLPYRIDIN-2-AMINE HETNAM GOL GLYCEROL HETNAM PEG DI(HYDROXYETHYL)ETHER HETNAM POL N-PROPANOL HETSYN HEM HEME HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL HETSYN POL 1-PROPONOL FORMUL 2 HEM C34 H32 FE N4 O4 FORMUL 3 H4B C9 H15 N5 O3 FORMUL 4 CL CL 1- FORMUL 5 0GD C21 H22 F N3 FORMUL 6 GOL 4(C3 H8 O3) FORMUL 9 PEG C4 H10 O3 FORMUL 10 POL C3 H8 O FORMUL 12 HOH *397(H2 O) HELIX 1 1 GLU A 2 LEU A 22 1 21 HELIX 2 2 LYS A 24 ALA A 26 5 3 HELIX 3 3 GLU A 27 GLY A 43 1 17 HELIX 4 4 THR A 48 ASN A 62 1 15 HELIX 5 5 GLY A 68 LEU A 75 5 8 HELIX 6 6 THR A 85 ASN A 102 1 18 HELIX 7 7 ASN A 103 LYS A 105 5 3 HELIX 8 8 SER A 148 GLU A 156 1 9 HELIX 9 9 PRO A 188 VAL A 192 5 5 HELIX 10 10 ILE A 202 GLU A 209 5 8 HELIX 11 11 GLY A 241 ALA A 246 1 6 HELIX 12 12 LYS A 257 ILE A 265 1 9 HELIX 13 13 TYR A 271 ASP A 274 5 4 HELIX 14 14 LEU A 275 GLY A 296 1 22 HELIX 15 15 ASP A 301 GLY A 320 1 20 HELIX 16 16 ASP A 326 ILE A 331 1 6 HELIX 17 17 SER A 335 THR A 339 5 5 HELIX 18 18 THR A 339 ARG A 344 5 6 SHEET 1 AA 4 ASN A 76 ASP A 79 0 SHEET 2 AA 4 THR A 109 ILE A 112 1 O ILE A 110 N ILE A 78 SHEET 3 AA 4 PHE A 235 ASN A 236 -1 O ASN A 236 N THR A 109 SHEET 4 AA 4 ILE A 217 ILE A 218 -1 O ILE A 218 N PHE A 235 SHEET 1 AB 3 VAL A 123 ILE A 125 0 SHEET 2 AB 3 LEU A 172 MET A 176 -1 O ARG A 175 N GLU A 124 SHEET 3 AB 3 VAL A 183 TYR A 185 -1 O VAL A 183 N PHE A 174 SHEET 1 AC 2 GLY A 135 SER A 138 0 SHEET 2 AC 2 GLU A 141 GLY A 144 -1 O GLU A 141 N SER A 138 SHEET 1 AD 2 GLU A 194 PRO A 196 0 SHEET 2 AD 2 LYS A 211 TYR A 213 -1 O TRP A 212 N VAL A 195 SHEET 1 AE 3 ILE A 228 TYR A 230 0 SHEET 2 AE 3 LYS A 222 VAL A 225 -1 O LEU A 223 N TYR A 230 SHEET 3 AE 3 ASN A 354 PHE A 356 -1 O ASN A 354 N GLU A 224 SHEET 1 AF 2 TYR A 239 MET A 240 0 SHEET 2 AF 2 ILE A 299 VAL A 300 1 N VAL A 300 O TYR A 239 LINK SG CYS A 66 FE HEM A 901 1555 1555 2.42 CISPEP 1 LYS A 352 PRO A 353 0 -0.59 SITE 1 AC1 17 TRP A 60 SER A 63 ARG A 65 CYS A 66 SITE 2 AC1 17 PHE A 235 ASN A 236 TRP A 238 GLU A 243 SITE 3 AC1 17 TRP A 329 TYR A 355 TYR A 357 H4B A 902 SITE 4 AC1 17 0GD A 904 PEG A 909 GOL A 912 HOH A2391 SITE 5 AC1 17 HOH A2392 SITE 1 AC2 13 ARG A 247 TRP A 327 THR A 328 TRP A 329 SITE 2 AC2 13 PHE A 342 HIS A 343 ARG A 344 HEM A 901 SITE 3 AC2 13 HOH A2279 HOH A2362 HOH A2363 HOH A2392 SITE 4 AC2 13 HOH A2393 SITE 1 AC3 4 GLN A 129 ARG A 132 TYR A 239 ASN A 248 SITE 1 AC4 9 ILE A 218 PHE A 235 GLY A 237 TRP A 238 SITE 2 AC4 9 TYR A 239 GLU A 243 TYR A 357 HEM A 901 SITE 3 AC4 9 PEG A 909 SITE 1 AC5 9 GLU A 156 TRP A 160 ARG A 161 TRP A 238 SITE 2 AC5 9 SER A 298 ILE A 299 HOH A2194 HOH A2197 SITE 3 AC5 9 HOH A2394 SITE 1 AC6 6 ARG A 142 GLY A 144 ASP A 166 TYR A 255 SITE 2 AC6 6 LYS A 257 HOH A2177 SITE 1 AC7 5 VAL A 183 TRP A 184 ASN A 272 HOH A2304 SITE 2 AC7 5 HOH A2395 SITE 1 AC8 6 HIS A 128 ASP A 220 MET A 221 TYR A 357 SITE 2 AC8 6 HEM A 901 0GD A 904 SITE 1 AC9 3 SER A 263 GLY A 266 ILE A 267 SITE 1 BC1 7 ARG A 65 TYR A 355 PHE A 356 TYR A 357 SITE 2 BC1 7 HEM A 901 HOH A2054 HOH A2397 CRYST1 80.531 94.801 62.828 90.00 90.00 90.00 P 21 21 2 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012418 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010548 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015916 0.00000