data_4D85 # _entry.id 4D85 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.281 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 4D85 RCSB RCSB070002 WWPDB D_1000070002 # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 3VEU 'Compound 3 of primary citation' unspecified PDB 3VF3 'Analogue of compound 14b of primary citation' unspecified PDB 3VG1 'Compound 32a of primary citation (soak, P212121)' unspecified PDB 4D83 'Compound 32a of primary citation (co-crystallization, P21)' unspecified PDB 4D88 . unspecified PDB 4D89 . unspecified PDB 4D8C . unspecified # _pdbx_database_status.entry_id 4D85 _pdbx_database_status.status_code REL _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2012-01-10 _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Rondeau, J.M.' 1 'Bourgier, E.' 2 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary ;Discovery of cyclic sulfone hydroxyethylamines as potent and selective beta-site APP-cleaving enzyme 1 (BACE1) inhibitors: structure based design and in vivo reduction of amyloid beta-peptides ; J.Med.Chem. 55 3364 3386 2012 JMCMAR US 0022-2623 0151 ? 22380629 10.1021/jm300069y 1 'Structure-Based Design, synthesis and SAR of cyclic hydroxyethylamine (HEA) BACE-1 inhibitors' Bioorg.Med.Chem.Lett. 21 1942 1947 2011 BMCLE8 UK 0960-894X 1127 ? ? ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Rueeger, H.' 1 primary 'Lueoend, R.' 2 primary 'Rogel, O.' 3 primary 'Rondeau, J.M.' 4 primary 'Mobitz, H.' 5 primary 'Machauer, R.' 6 primary 'Jacobson, L.' 7 primary 'Staufenbiel, M.' 8 primary 'Desrayaud, S.' 9 primary 'Neumann, U.' 10 1 'Rueeger, H.' 11 1 'Rondeau, J.M.' 12 1 'McCarthy, C.' 13 1 'Moebitz, H.' 14 1 'Tintelnot-Blomley, M.' 15 1 'Neumann, U.' 16 1 'Desrayaud, S.' 17 # _cell.entry_id 4D85 _cell.length_a 102.656 _cell.length_b 102.656 _cell.length_c 170.902 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4D85 _symmetry.space_group_name_H-M 'P 61 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Beta-secretase 1' 45434.957 1 3.4.23.46 ? 'Catalytic domain (unp residues 48-453)' ? 2 non-polymer syn ;(3R,4S,5S)-3-[(3-tert-butylbenzyl)amino]-5-[(4,4,7'-trifluoro-1',2'-dihydrospiro[cyclohexane-1,3'-indol]-5'-yl)methyl]tetrahydro-2H-thiopyran-4-ol 1,1-dioxide ; 564.702 1 ? ? ? ? 3 non-polymer syn 'IODIDE ION' 126.904 1 ? ? ? ? 4 water nat water 18.015 96 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name ;Aspartyl protease 2, ASP2, Asp 2, Beta-site amyloid precursor protein cleaving enzyme 1, Beta-site APP cleaving enzyme 1, Memapsin-2, Membrane-associated aspartic protease 2 ; # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GPDEEPEEPGRRGSFVEMVDNLRGKSGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPHPFLHRYYQRQLSSTYRDLR KGVYVPYTQGKWEGELGTDLVSIPHGPNVTVRANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLEPFFDSLVKQT HVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRREWYYEVIIVRVEINGQDLKMDCKEYNYDK SIVDSGTTNLRLPKKVFEAAVKSIKAASSTEKFPDGFWLGEQLVCWQAGTTPWNIFPVISLYLMGEVTNQSFRITILPQQ YLRPVEDVATSQDDCYKFAISQSSTGTVMGAVIMEGFYVVFDRARKRIGFAVSACHVHDEFRTAAVEGPFVTLDMEDCGY NIPQTDES ; _entity_poly.pdbx_seq_one_letter_code_can ;GPDEEPEEPGRRGSFVEMVDNLRGKSGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPHPFLHRYYQRQLSSTYRDLR KGVYVPYTQGKWEGELGTDLVSIPHGPNVTVRANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLEPFFDSLVKQT HVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRREWYYEVIIVRVEINGQDLKMDCKEYNYDK SIVDSGTTNLRLPKKVFEAAVKSIKAASSTEKFPDGFWLGEQLVCWQAGTTPWNIFPVISLYLMGEVTNQSFRITILPQQ YLRPVEDVATSQDDCYKFAISQSSTGTVMGAVIMEGFYVVFDRARKRIGFAVSACHVHDEFRTAAVEGPFVTLDMEDCGY NIPQTDES ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 PRO n 1 3 ASP n 1 4 GLU n 1 5 GLU n 1 6 PRO n 1 7 GLU n 1 8 GLU n 1 9 PRO n 1 10 GLY n 1 11 ARG n 1 12 ARG n 1 13 GLY n 1 14 SER n 1 15 PHE n 1 16 VAL n 1 17 GLU n 1 18 MET n 1 19 VAL n 1 20 ASP n 1 21 ASN n 1 22 LEU n 1 23 ARG n 1 24 GLY n 1 25 LYS n 1 26 SER n 1 27 GLY n 1 28 GLN n 1 29 GLY n 1 30 TYR n 1 31 TYR n 1 32 VAL n 1 33 GLU n 1 34 MET n 1 35 THR n 1 36 VAL n 1 37 GLY n 1 38 SER n 1 39 PRO n 1 40 PRO n 1 41 GLN n 1 42 THR n 1 43 LEU n 1 44 ASN n 1 45 ILE n 1 46 LEU n 1 47 VAL n 1 48 ASP n 1 49 THR n 1 50 GLY n 1 51 SER n 1 52 SER n 1 53 ASN n 1 54 PHE n 1 55 ALA n 1 56 VAL n 1 57 GLY n 1 58 ALA n 1 59 ALA n 1 60 PRO n 1 61 HIS n 1 62 PRO n 1 63 PHE n 1 64 LEU n 1 65 HIS n 1 66 ARG n 1 67 TYR n 1 68 TYR n 1 69 GLN n 1 70 ARG n 1 71 GLN n 1 72 LEU n 1 73 SER n 1 74 SER n 1 75 THR n 1 76 TYR n 1 77 ARG n 1 78 ASP n 1 79 LEU n 1 80 ARG n 1 81 LYS n 1 82 GLY n 1 83 VAL n 1 84 TYR n 1 85 VAL n 1 86 PRO n 1 87 TYR n 1 88 THR n 1 89 GLN n 1 90 GLY n 1 91 LYS n 1 92 TRP n 1 93 GLU n 1 94 GLY n 1 95 GLU n 1 96 LEU n 1 97 GLY n 1 98 THR n 1 99 ASP n 1 100 LEU n 1 101 VAL n 1 102 SER n 1 103 ILE n 1 104 PRO n 1 105 HIS n 1 106 GLY n 1 107 PRO n 1 108 ASN n 1 109 VAL n 1 110 THR n 1 111 VAL n 1 112 ARG n 1 113 ALA n 1 114 ASN n 1 115 ILE n 1 116 ALA n 1 117 ALA n 1 118 ILE n 1 119 THR n 1 120 GLU n 1 121 SER n 1 122 ASP n 1 123 LYS n 1 124 PHE n 1 125 PHE n 1 126 ILE n 1 127 ASN n 1 128 GLY n 1 129 SER n 1 130 ASN n 1 131 TRP n 1 132 GLU n 1 133 GLY n 1 134 ILE n 1 135 LEU n 1 136 GLY n 1 137 LEU n 1 138 ALA n 1 139 TYR n 1 140 ALA n 1 141 GLU n 1 142 ILE n 1 143 ALA n 1 144 ARG n 1 145 PRO n 1 146 ASP n 1 147 ASP n 1 148 SER n 1 149 LEU n 1 150 GLU n 1 151 PRO n 1 152 PHE n 1 153 PHE n 1 154 ASP n 1 155 SER n 1 156 LEU n 1 157 VAL n 1 158 LYS n 1 159 GLN n 1 160 THR n 1 161 HIS n 1 162 VAL n 1 163 PRO n 1 164 ASN n 1 165 LEU n 1 166 PHE n 1 167 SER n 1 168 LEU n 1 169 GLN n 1 170 LEU n 1 171 CYS n 1 172 GLY n 1 173 ALA n 1 174 GLY n 1 175 PHE n 1 176 PRO n 1 177 LEU n 1 178 ASN n 1 179 GLN n 1 180 SER n 1 181 GLU n 1 182 VAL n 1 183 LEU n 1 184 ALA n 1 185 SER n 1 186 VAL n 1 187 GLY n 1 188 GLY n 1 189 SER n 1 190 MET n 1 191 ILE n 1 192 ILE n 1 193 GLY n 1 194 GLY n 1 195 ILE n 1 196 ASP n 1 197 HIS n 1 198 SER n 1 199 LEU n 1 200 TYR n 1 201 THR n 1 202 GLY n 1 203 SER n 1 204 LEU n 1 205 TRP n 1 206 TYR n 1 207 THR n 1 208 PRO n 1 209 ILE n 1 210 ARG n 1 211 ARG n 1 212 GLU n 1 213 TRP n 1 214 TYR n 1 215 TYR n 1 216 GLU n 1 217 VAL n 1 218 ILE n 1 219 ILE n 1 220 VAL n 1 221 ARG n 1 222 VAL n 1 223 GLU n 1 224 ILE n 1 225 ASN n 1 226 GLY n 1 227 GLN n 1 228 ASP n 1 229 LEU n 1 230 LYS n 1 231 MET n 1 232 ASP n 1 233 CYS n 1 234 LYS n 1 235 GLU n 1 236 TYR n 1 237 ASN n 1 238 TYR n 1 239 ASP n 1 240 LYS n 1 241 SER n 1 242 ILE n 1 243 VAL n 1 244 ASP n 1 245 SER n 1 246 GLY n 1 247 THR n 1 248 THR n 1 249 ASN n 1 250 LEU n 1 251 ARG n 1 252 LEU n 1 253 PRO n 1 254 LYS n 1 255 LYS n 1 256 VAL n 1 257 PHE n 1 258 GLU n 1 259 ALA n 1 260 ALA n 1 261 VAL n 1 262 LYS n 1 263 SER n 1 264 ILE n 1 265 LYS n 1 266 ALA n 1 267 ALA n 1 268 SER n 1 269 SER n 1 270 THR n 1 271 GLU n 1 272 LYS n 1 273 PHE n 1 274 PRO n 1 275 ASP n 1 276 GLY n 1 277 PHE n 1 278 TRP n 1 279 LEU n 1 280 GLY n 1 281 GLU n 1 282 GLN n 1 283 LEU n 1 284 VAL n 1 285 CYS n 1 286 TRP n 1 287 GLN n 1 288 ALA n 1 289 GLY n 1 290 THR n 1 291 THR n 1 292 PRO n 1 293 TRP n 1 294 ASN n 1 295 ILE n 1 296 PHE n 1 297 PRO n 1 298 VAL n 1 299 ILE n 1 300 SER n 1 301 LEU n 1 302 TYR n 1 303 LEU n 1 304 MET n 1 305 GLY n 1 306 GLU n 1 307 VAL n 1 308 THR n 1 309 ASN n 1 310 GLN n 1 311 SER n 1 312 PHE n 1 313 ARG n 1 314 ILE n 1 315 THR n 1 316 ILE n 1 317 LEU n 1 318 PRO n 1 319 GLN n 1 320 GLN n 1 321 TYR n 1 322 LEU n 1 323 ARG n 1 324 PRO n 1 325 VAL n 1 326 GLU n 1 327 ASP n 1 328 VAL n 1 329 ALA n 1 330 THR n 1 331 SER n 1 332 GLN n 1 333 ASP n 1 334 ASP n 1 335 CYS n 1 336 TYR n 1 337 LYS n 1 338 PHE n 1 339 ALA n 1 340 ILE n 1 341 SER n 1 342 GLN n 1 343 SER n 1 344 SER n 1 345 THR n 1 346 GLY n 1 347 THR n 1 348 VAL n 1 349 MET n 1 350 GLY n 1 351 ALA n 1 352 VAL n 1 353 ILE n 1 354 MET n 1 355 GLU n 1 356 GLY n 1 357 PHE n 1 358 TYR n 1 359 VAL n 1 360 VAL n 1 361 PHE n 1 362 ASP n 1 363 ARG n 1 364 ALA n 1 365 ARG n 1 366 LYS n 1 367 ARG n 1 368 ILE n 1 369 GLY n 1 370 PHE n 1 371 ALA n 1 372 VAL n 1 373 SER n 1 374 ALA n 1 375 CYS n 1 376 HIS n 1 377 VAL n 1 378 HIS n 1 379 ASP n 1 380 GLU n 1 381 PHE n 1 382 ARG n 1 383 THR n 1 384 ALA n 1 385 ALA n 1 386 VAL n 1 387 GLU n 1 388 GLY n 1 389 PRO n 1 390 PHE n 1 391 VAL n 1 392 THR n 1 393 LEU n 1 394 ASP n 1 395 MET n 1 396 GLU n 1 397 ASP n 1 398 CYS n 1 399 GLY n 1 400 TYR n 1 401 ASN n 1 402 ILE n 1 403 PRO n 1 404 GLN n 1 405 THR n 1 406 ASP n 1 407 GLU n 1 408 SER n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'BACE, BACE1, KIAA1149' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET24 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code BACE1_HUMAN _struct_ref.pdbx_db_accession P56817 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;DEEPEEPGRRGSFVEMVDNLRGKSGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPHPFLHRYYQRQLSSTYRDLRKG VYVPYTQGKWEGELGTDLVSIPHGPNVTVRANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLEPFFDSLVKQTHV PNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRREWYYEVIIVRVEINGQDLKMDCKEYNYDKSI VDSGTTNLRLPKKVFEAAVKSIKAASSTEKFPDGFWLGEQLVCWQAGTTPWNIFPVISLYLMGEVTNQSFRITILPQQYL RPVEDVATSQDDCYKFAISQSSTGTVMGAVIMEGFYVVFDRARKRIGFAVSACHVHDEFRTAAVEGPFVTLDMEDCGYNI PQTDES ; _struct_ref.pdbx_align_begin 48 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4D85 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 3 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 408 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P56817 _struct_ref_seq.db_align_beg 48 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 453 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg -11 _struct_ref_seq.pdbx_auth_seq_align_end 379 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4D85 GLY A 1 ? UNP P56817 ? ? 'EXPRESSION TAG' -13 1 1 4D85 PRO A 2 ? UNP P56817 ? ? 'EXPRESSION TAG' -12 2 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 0GU non-polymer . ;(3R,4S,5S)-3-[(3-tert-butylbenzyl)amino]-5-[(4,4,7'-trifluoro-1',2'-dihydrospiro[cyclohexane-1,3'-indol]-5'-yl)methyl]tetrahydro-2H-thiopyran-4-ol 1,1-dioxide ; ? 'C30 H39 F3 N2 O3 S' 564.702 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 IOD non-polymer . 'IODIDE ION' ? 'I -1' 126.904 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.entry_id 4D85 _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.86 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 57.00 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.temp 292 _exptl_crystal_grow.pdbx_details '0.2M sodium citrate pH 6.5, 0.2M sodium iodide, 25% PEG MME 5,000, vapor diffusion, hanging drop, temperature 292K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 225 mm CCD' _diffrn_detector.pdbx_collection_date 2007-11-22 _diffrn_detector.details mirrors # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator 'SAGITALLY FOCUSED Si(111)' _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.00146 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SLS BEAMLINE X10SA' _diffrn_source.pdbx_wavelength_list 1.00146 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site SLS _diffrn_source.pdbx_synchrotron_beamline X10SA # _reflns.entry_id 4D85 _reflns.d_resolution_high 2.650 _reflns.d_resolution_low 100.000 _reflns.number_obs 15949 _reflns.pdbx_Rmerge_I_obs 0.099 _reflns.pdbx_netI_over_sigmaI 6.300 _reflns.pdbx_chi_squared 0.969 _reflns.pdbx_redundancy 3.500 _reflns.percent_possible_obs 98.600 _reflns.observed_criterion_sigma_F 0.00 _reflns.observed_criterion_sigma_I 0.00 _reflns.number_all 15949 _reflns.pdbx_Rsym_value ? _reflns.B_iso_Wilson_estimate ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 2.650 2.740 ? ? ? 0.470 ? ? 0.786 3.500 ? 1545 98.500 1 1 2.740 2.850 ? ? ? 0.381 ? ? 0.854 3.500 ? 1553 99.100 2 1 2.850 2.980 ? ? ? 0.292 ? ? 0.919 3.500 ? 1563 99.200 3 1 2.980 3.140 ? ? ? 0.221 ? ? 1.021 3.500 ? 1564 99.400 4 1 3.140 3.340 ? ? ? 0.171 ? ? 1.081 3.500 ? 1584 99.500 5 1 3.340 3.600 ? ? ? 0.125 ? ? 1.162 3.500 ? 1581 99.200 6 1 3.600 3.960 ? ? ? 0.089 ? ? 1.213 3.500 ? 1609 99.200 7 1 3.960 4.530 ? ? ? 0.065 ? ? 1.074 3.400 ? 1605 99.000 8 1 4.530 5.710 ? ? ? 0.047 ? ? 0.734 3.400 ? 1628 98.000 9 1 5.710 100.000 ? ? ? 0.047 ? ? 0.836 3.200 ? 1717 95.300 10 1 # _refine.entry_id 4D85 _refine.ls_d_res_high 2.6500 _refine.ls_d_res_low 35.0500 _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_data_cutoff_high_absF 36578136.0000 _refine.pdbx_data_cutoff_low_absF 0.0000 _refine.ls_percent_reflns_obs 98.8000 _refine.ls_number_reflns_obs 15939 _refine.ls_number_reflns_all 15939 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details ? _refine.ls_R_factor_all 0.209 _refine.ls_R_factor_obs 0.209 _refine.ls_R_factor_R_work 0.2070 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.2470 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 4.9000 _refine.ls_number_reflns_R_free 779 _refine.ls_R_factor_R_free_error 0.0090 _refine.B_iso_mean 38.9528 _refine.solvent_model_param_bsol 47.0758 _refine.solvent_model_param_ksol 0.3721 _refine.pdbx_isotropic_thermal_model RESTRAINED _refine.aniso_B[1][1] -8.1000 _refine.aniso_B[2][2] -8.1000 _refine.aniso_B[3][3] 16.2000 _refine.aniso_B[1][2] 4.4300 _refine.aniso_B[1][3] 0.0000 _refine.aniso_B[2][3] 0.0000 _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.solvent_model_details 'FLAT MODEL' _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'FOURIER SYNTHESIS' _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set 0.8416 _refine.B_iso_max 89.730 _refine.B_iso_min 11.450 _refine.pdbx_overall_phase_error ? _refine.occupancy_max 1.000 _refine.occupancy_min 0.500 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 4D85 _refine_analyze.Luzzati_coordinate_error_obs 0.290 _refine_analyze.Luzzati_sigma_a_obs 0.340 _refine_analyze.Luzzati_d_res_low_obs 5.000 _refine_analyze.Luzzati_coordinate_error_free 0.370 _refine_analyze.Luzzati_sigma_a_free 0.430 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2941 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 40 _refine_hist.number_atoms_solvent 96 _refine_hist.number_atoms_total 3077 _refine_hist.d_res_high 2.6500 _refine_hist.d_res_low 35.0500 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id c_bond_d ? 0.006 ? ? ? 'X-RAY DIFFRACTION' c_angle_deg ? 0.900 ? ? ? 'X-RAY DIFFRACTION' c_dihedral_angle_d ? 28.400 ? ? ? 'X-RAY DIFFRACTION' c_improper_angle_d ? 0.680 ? ? ? 'X-RAY DIFFRACTION' c_mcbond_it ? 1.360 1.500 ? ? 'X-RAY DIFFRACTION' c_mcangle_it ? 2.330 2.000 ? ? 'X-RAY DIFFRACTION' c_scbond_it ? 1.980 2.000 ? ? 'X-RAY DIFFRACTION' c_scangle_it ? 3.080 2.500 ? ? 'X-RAY DIFFRACTION' # _refine_ls_shell.d_res_high 2.6500 _refine_ls_shell.d_res_low 2.8200 _refine_ls_shell.pdbx_total_number_of_bins_used 6 _refine_ls_shell.percent_reflns_obs 98.6000 _refine_ls_shell.number_reflns_R_work 2457 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.2870 _refine_ls_shell.R_factor_R_free 0.3730 _refine_ls_shell.percent_reflns_R_free 4.5000 _refine_ls_shell.number_reflns_R_free 115 _refine_ls_shell.R_factor_R_free_error 0.0350 _refine_ls_shell.number_reflns_all 2572 _refine_ls_shell.number_reflns_obs 2572 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 PROTEIN_REP.PARAM PROTEIN.TOP 'X-RAY DIFFRACTION' 2 WATER_REP.PARAM WATER.TOP 'X-RAY DIFFRACTION' 3 ION.PARAM NVP-BVI151.TOP 'X-RAY DIFFRACTION' 4 NVP-BVI151.PARAM ? 'X-RAY DIFFRACTION' # _struct.entry_id 4D85 _struct.title 'Crystal Structure of Human Beta Secretase in Complex with NVP-BVI151' _struct.pdbx_descriptor 'Beta-secretase 1 (E.C.3.4.23.46)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4D85 _struct_keywords.text ;Beta-Secretase, Memapsin2, Bace1, Aspartic Proteinase, Alzheimer's disease, Enzyme inhibitor complex, Structure-based drug design, Hydrolase, Hydrolase-Hydrolase inhibitor complex ; _struct_keywords.pdbx_keywords 'Hydrolase/Hydrolase inhibitor' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLN A 69 ? SER A 73 ? GLN A 55 SER A 59 5 ? 5 HELX_P HELX_P2 2 TYR A 139 ? ALA A 143 ? TYR A 125 ALA A 129 5 ? 5 HELX_P HELX_P3 3 PRO A 151 ? THR A 160 ? PRO A 137 THR A 146 1 ? 10 HELX_P HELX_P4 4 ASP A 196 ? SER A 198 ? ASP A 172 SER A 174 5 ? 3 HELX_P HELX_P5 5 ASP A 232 ? ASN A 237 ? ASP A 208 ASN A 213 5 ? 6 HELX_P HELX_P6 6 LYS A 254 ? SER A 268 ? LYS A 230 SER A 244 1 ? 15 HELX_P HELX_P7 7 PRO A 274 ? LEU A 279 ? PRO A 250 LEU A 255 1 ? 6 HELX_P HELX_P8 8 PRO A 292 ? PHE A 296 ? PRO A 268 PHE A 272 5 ? 5 HELX_P HELX_P9 9 LEU A 317 ? TYR A 321 ? LEU A 293 TYR A 297 1 ? 5 HELX_P HELX_P10 10 GLY A 350 ? GLU A 355 ? GLY A 321 GLU A 326 1 ? 6 HELX_P HELX_P11 11 ASP A 394 ? GLY A 399 ? ASP A 365 GLY A 370 5 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf1 disulf ? ? A CYS 171 SG ? ? ? 1_555 A CYS 375 SG ? ? A CYS 157 A CYS 346 1_555 ? ? ? ? ? ? ? 2.039 ? disulf2 disulf ? ? A CYS 233 SG ? ? ? 1_555 A CYS 398 SG ? ? A CYS 209 A CYS 369 1_555 ? ? ? ? ? ? ? 2.040 ? disulf3 disulf ? ? A CYS 285 SG ? ? ? 1_555 A CYS 335 SG ? ? A CYS 261 A CYS 306 1_555 ? ? ? ? ? ? ? 2.040 ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 SER 38 A . ? SER 24 A PRO 39 A ? PRO 25 A 1 -0.62 2 ARG 144 A . ? ARG 130 A PRO 145 A ? PRO 131 A 1 0.49 3 TYR 238 A . ? TYR 214 A ASP 239 A ? ASP 215 A 1 0.34 4 GLY 388 A . ? GLY 359 A PRO 389 A ? PRO 360 A 1 -0.45 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 9 ? B ? 13 ? C ? 5 ? D ? 5 ? E ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel A 6 7 ? anti-parallel A 7 8 ? anti-parallel A 8 9 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? parallel B 4 5 ? anti-parallel B 5 6 ? parallel B 6 7 ? anti-parallel B 7 8 ? anti-parallel B 8 9 ? anti-parallel B 9 10 ? anti-parallel B 10 11 ? anti-parallel B 11 12 ? anti-parallel B 12 13 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? parallel C 3 4 ? anti-parallel C 4 5 ? parallel D 1 2 ? anti-parallel D 2 3 ? anti-parallel D 3 4 ? anti-parallel D 4 5 ? anti-parallel E 1 2 ? anti-parallel E 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ARG A 77 ? PRO A 86 ? ARG A 63 PRO A 72 A 2 LYS A 91 ? SER A 102 ? LYS A 77 SER A 88 A 3 TYR A 31 ? VAL A 36 ? TYR A 17 VAL A 22 A 4 LEU A 22 ? LYS A 25 ? LEU A 8 LYS A 11 A 5 SER A 185 ? ILE A 192 ? SER A 161 ILE A 168 A 6 PHE A 166 ? CYS A 171 ? PHE A 152 CYS A 157 A 7 PHE A 357 ? ASP A 362 ? PHE A 328 ASP A 333 A 8 ARG A 367 ? SER A 373 ? ARG A 338 SER A 344 A 9 TYR A 200 ? PRO A 208 ? TYR A 176 PRO A 184 B 1 ARG A 77 ? PRO A 86 ? ARG A 63 PRO A 72 B 2 LYS A 91 ? SER A 102 ? LYS A 77 SER A 88 B 3 VAL A 111 ? ASP A 122 ? VAL A 97 ASP A 108 B 4 PHE A 54 ? GLY A 57 ? PHE A 40 GLY A 43 B 5 GLY A 133 ? GLY A 136 ? GLY A 119 GLY A 122 B 6 GLN A 41 ? ASP A 48 ? GLN A 27 ASP A 34 B 7 TYR A 31 ? VAL A 36 ? TYR A 17 VAL A 22 B 8 LEU A 22 ? LYS A 25 ? LEU A 8 LYS A 11 B 9 SER A 185 ? ILE A 192 ? SER A 161 ILE A 168 B 10 PHE A 166 ? CYS A 171 ? PHE A 152 CYS A 157 B 11 PHE A 357 ? ASP A 362 ? PHE A 328 ASP A 333 B 12 ARG A 367 ? SER A 373 ? ARG A 338 SER A 344 B 13 TYR A 200 ? PRO A 208 ? TYR A 176 PRO A 184 C 1 GLU A 216 ? VAL A 217 ? GLU A 192 VAL A 193 C 2 SER A 241 ? VAL A 243 ? SER A 217 VAL A 219 C 3 VAL A 348 ? MET A 349 ? VAL A 319 MET A 320 C 4 LEU A 250 ? PRO A 253 ? LEU A 226 PRO A 229 C 5 ILE A 340 ? SER A 343 ? ILE A 311 SER A 314 D 1 GLN A 227 ? ASP A 228 ? GLN A 203 ASP A 204 D 2 ILE A 219 ? ILE A 224 ? ILE A 195 ILE A 200 D 3 ILE A 299 ? MET A 304 ? ILE A 275 MET A 280 D 4 GLN A 310 ? ILE A 316 ? GLN A 286 ILE A 292 D 5 ALA A 385 ? VAL A 391 ? ALA A 356 VAL A 362 E 1 VAL A 284 ? TRP A 286 ? VAL A 260 TRP A 262 E 2 ASP A 334 ? PHE A 338 ? ASP A 305 PHE A 309 E 3 LEU A 322 ? PRO A 324 ? LEU A 298 PRO A 300 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ARG A 77 ? N ARG A 63 O THR A 98 ? O THR A 84 A 2 3 O SER A 102 ? O SER A 88 N THR A 35 ? N THR A 21 A 3 4 O TYR A 31 ? O TYR A 17 N ARG A 23 ? N ARG A 9 A 4 5 N GLY A 24 ? N GLY A 10 O VAL A 186 ? O VAL A 162 A 5 6 O SER A 189 ? O SER A 165 N GLN A 169 ? N GLN A 155 A 6 7 N PHE A 166 ? N PHE A 152 O PHE A 361 ? O PHE A 332 A 7 8 N TYR A 358 ? N TYR A 329 O ALA A 371 ? O ALA A 342 A 8 9 O ILE A 368 ? O ILE A 339 N THR A 207 ? N THR A 183 B 1 2 N ARG A 77 ? N ARG A 63 O THR A 98 ? O THR A 84 B 2 3 N GLU A 95 ? N GLU A 81 O ALA A 117 ? O ALA A 103 B 3 4 O ILE A 118 ? O ILE A 104 N VAL A 56 ? N VAL A 42 B 4 5 N ALA A 55 ? N ALA A 41 O ILE A 134 ? O ILE A 120 B 5 6 O LEU A 135 ? O LEU A 121 N LEU A 46 ? N LEU A 32 B 6 7 O GLN A 41 ? O GLN A 27 N VAL A 36 ? N VAL A 22 B 7 8 O TYR A 31 ? O TYR A 17 N ARG A 23 ? N ARG A 9 B 8 9 N GLY A 24 ? N GLY A 10 O VAL A 186 ? O VAL A 162 B 9 10 O SER A 189 ? O SER A 165 N GLN A 169 ? N GLN A 155 B 10 11 N PHE A 166 ? N PHE A 152 O PHE A 361 ? O PHE A 332 B 11 12 N TYR A 358 ? N TYR A 329 O ALA A 371 ? O ALA A 342 B 12 13 O ILE A 368 ? O ILE A 339 N THR A 207 ? N THR A 183 C 1 2 N VAL A 217 ? N VAL A 193 O SER A 241 ? O SER A 217 C 2 3 N ILE A 242 ? N ILE A 218 O MET A 349 ? O MET A 320 C 3 4 O VAL A 348 ? O VAL A 319 N ARG A 251 ? N ARG A 227 C 4 5 N LEU A 250 ? N LEU A 226 O SER A 341 ? O SER A 312 D 1 2 O GLN A 227 ? O GLN A 203 N ILE A 224 ? N ILE A 200 D 2 3 N ARG A 221 ? N ARG A 197 O TYR A 302 ? O TYR A 278 D 3 4 N LEU A 301 ? N LEU A 277 O ILE A 314 ? O ILE A 290 D 4 5 N ARG A 313 ? N ARG A 289 O GLU A 387 ? O GLU A 358 E 1 2 N TRP A 286 ? N TRP A 262 O ASP A 334 ? O ASP A 305 E 2 3 O LYS A 337 ? O LYS A 308 N ARG A 323 ? N ARG A 299 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 20 'BINDING SITE FOR RESIDUE 0GU A 401' AC2 Software ? ? ? ? 1 'BINDING SITE FOR RESIDUE IOD A 402' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 20 GLY A 27 ? GLY A 13 . ? 1_555 ? 2 AC1 20 ASP A 48 ? ASP A 34 . ? 1_555 ? 3 AC1 20 GLY A 50 ? GLY A 36 . ? 1_555 ? 4 AC1 20 SER A 51 ? SER A 37 . ? 1_555 ? 5 AC1 20 PRO A 86 ? PRO A 72 . ? 1_555 ? 6 AC1 20 TYR A 87 ? TYR A 73 . ? 1_555 ? 7 AC1 20 THR A 88 ? THR A 74 . ? 1_555 ? 8 AC1 20 GLN A 89 ? GLN A 75 . ? 1_555 ? 9 AC1 20 GLY A 90 ? GLY A 76 . ? 1_555 ? 10 AC1 20 PHE A 124 ? PHE A 110 . ? 1_555 ? 11 AC1 20 ILE A 126 ? ILE A 112 . ? 1_555 ? 12 AC1 20 ARG A 144 ? ARG A 130 . ? 1_555 ? 13 AC1 20 TYR A 214 ? TYR A 190 . ? 1_555 ? 14 AC1 20 ASP A 244 ? ASP A 220 . ? 1_555 ? 15 AC1 20 GLY A 246 ? GLY A 222 . ? 1_555 ? 16 AC1 20 THR A 247 ? THR A 223 . ? 1_555 ? 17 AC1 20 THR A 248 ? THR A 224 . ? 1_555 ? 18 AC1 20 ARG A 251 ? ARG A 227 . ? 1_555 ? 19 AC1 20 HOH D . ? HOH A 524 . ? 1_555 ? 20 AC1 20 HOH D . ? HOH A 593 . ? 1_555 ? 21 AC2 1 THR A 119 ? THR A 105 . ? 1_555 ? # _database_PDB_matrix.entry_id 4D85 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.000000 _database_PDB_matrix.origx_vector[2] 0.000000 _database_PDB_matrix.origx_vector[3] 0.000000 # _atom_sites.entry_id 4D85 _atom_sites.fract_transf_matrix[1][1] 0.009741 _atom_sites.fract_transf_matrix[1][2] 0.005624 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.011248 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.005851 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C F I N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 -13 ? ? ? A . n A 1 2 PRO 2 -12 ? ? ? A . n A 1 3 ASP 3 -11 ? ? ? A . n A 1 4 GLU 4 -10 ? ? ? A . n A 1 5 GLU 5 -9 ? ? ? A . n A 1 6 PRO 6 -8 ? ? ? A . n A 1 7 GLU 7 -7 ? ? ? A . n A 1 8 GLU 8 -6 ? ? ? A . n A 1 9 PRO 9 -5 ? ? ? A . n A 1 10 GLY 10 -4 ? ? ? A . n A 1 11 ARG 11 -3 ? ? ? A . n A 1 12 ARG 12 -2 ? ? ? A . n A 1 13 GLY 13 -1 45 GLY GLY A . n A 1 14 SER 14 0 46 SER SER A . n A 1 15 PHE 15 1 47 PHE PHE A . n A 1 16 VAL 16 2 48 VAL VAL A . n A 1 17 GLU 17 3 1 GLU GLU A . n A 1 18 MET 18 4 2 MET MET A . n A 1 19 VAL 19 5 3 VAL VAL A . n A 1 20 ASP 20 6 4 ASP ASP A . n A 1 21 ASN 21 7 5 ASN ASN A . n A 1 22 LEU 22 8 6 LEU LEU A . n A 1 23 ARG 23 9 7 ARG ARG A . n A 1 24 GLY 24 10 8 GLY GLY A . n A 1 25 LYS 25 11 9 LYS LYS A . n A 1 26 SER 26 12 10 SER SER A . n A 1 27 GLY 27 13 11 GLY GLY A . n A 1 28 GLN 28 14 12 GLN GLN A . n A 1 29 GLY 29 15 13 GLY GLY A . n A 1 30 TYR 30 16 14 TYR TYR A . n A 1 31 TYR 31 17 15 TYR TYR A . n A 1 32 VAL 32 18 16 VAL VAL A . n A 1 33 GLU 33 19 17 GLU GLU A . n A 1 34 MET 34 20 18 MET MET A . n A 1 35 THR 35 21 19 THR THR A . n A 1 36 VAL 36 22 20 VAL VAL A . n A 1 37 GLY 37 23 21 GLY GLY A . n A 1 38 SER 38 24 22 SER SER A . n A 1 39 PRO 39 25 23 PRO PRO A . n A 1 40 PRO 40 26 24 PRO PRO A . n A 1 41 GLN 41 27 25 GLN GLN A . n A 1 42 THR 42 28 26 THR THR A . n A 1 43 LEU 43 29 27 LEU LEU A . n A 1 44 ASN 44 30 28 ASN ASN A . n A 1 45 ILE 45 31 29 ILE ILE A . n A 1 46 LEU 46 32 30 LEU LEU A . n A 1 47 VAL 47 33 31 VAL VAL A . n A 1 48 ASP 48 34 32 ASP ASP A . n A 1 49 THR 49 35 33 THR THR A . n A 1 50 GLY 50 36 34 GLY GLY A . n A 1 51 SER 51 37 35 SER SER A . n A 1 52 SER 52 38 36 SER SER A . n A 1 53 ASN 53 39 37 ASN ASN A . n A 1 54 PHE 54 40 38 PHE PHE A . n A 1 55 ALA 55 41 39 ALA ALA A . n A 1 56 VAL 56 42 40 VAL VAL A . n A 1 57 GLY 57 43 41 GLY GLY A . n A 1 58 ALA 58 44 42 ALA ALA A . n A 1 59 ALA 59 45 43 ALA ALA A . n A 1 60 PRO 60 46 44 PRO PRO A . n A 1 61 HIS 61 47 45 HIS HIS A . n A 1 62 PRO 62 48 46 PRO PRO A . n A 1 63 PHE 63 49 47 PHE PHE A . n A 1 64 LEU 64 50 48 LEU LEU A . n A 1 65 HIS 65 51 49 HIS HIS A . n A 1 66 ARG 66 52 50 ARG ARG A . n A 1 67 TYR 67 53 51 TYR TYR A . n A 1 68 TYR 68 54 52 TYR TYR A . n A 1 69 GLN 69 55 53 GLN GLN A . n A 1 70 ARG 70 56 54 ARG ARG A . n A 1 71 GLN 71 57 55 GLN GLN A . n A 1 72 LEU 72 58 56 LEU LEU A . n A 1 73 SER 73 59 57 SER SER A . n A 1 74 SER 74 60 58 SER SER A . n A 1 75 THR 75 61 59 THR THR A . n A 1 76 TYR 76 62 60 TYR TYR A . n A 1 77 ARG 77 63 61 ARG ARG A . n A 1 78 ASP 78 64 62 ASP ASP A . n A 1 79 LEU 79 65 63 LEU LEU A . n A 1 80 ARG 80 66 64 ARG ARG A . n A 1 81 LYS 81 67 65 LYS LYS A . n A 1 82 GLY 82 68 66 GLY GLY A . n A 1 83 VAL 83 69 67 VAL VAL A . n A 1 84 TYR 84 70 68 TYR TYR A . n A 1 85 VAL 85 71 69 VAL VAL A . n A 1 86 PRO 86 72 70 PRO PRO A . n A 1 87 TYR 87 73 71 TYR TYR A . n A 1 88 THR 88 74 72 THR THR A . n A 1 89 GLN 89 75 73 GLN GLN A . n A 1 90 GLY 90 76 74 GLY GLY A . n A 1 91 LYS 91 77 75 LYS LYS A . n A 1 92 TRP 92 78 76 TRP TRP A . n A 1 93 GLU 93 79 77 GLU GLU A . n A 1 94 GLY 94 80 78 GLY GLY A . n A 1 95 GLU 95 81 79 GLU GLU A . n A 1 96 LEU 96 82 80 LEU LEU A . n A 1 97 GLY 97 83 81 GLY GLY A . n A 1 98 THR 98 84 82 THR THR A . n A 1 99 ASP 99 85 83 ASP ASP A . n A 1 100 LEU 100 86 84 LEU LEU A . n A 1 101 VAL 101 87 85 VAL VAL A . n A 1 102 SER 102 88 86 SER SER A . n A 1 103 ILE 103 89 87 ILE ILE A . n A 1 104 PRO 104 90 88 PRO PRO A . n A 1 105 HIS 105 91 89 HIS HIS A . n A 1 106 GLY 106 92 90 GLY GLY A . n A 1 107 PRO 107 93 91 PRO PRO A . n A 1 108 ASN 108 94 92 ASN ASN A . n A 1 109 VAL 109 95 93 VAL VAL A . n A 1 110 THR 110 96 94 THR THR A . n A 1 111 VAL 111 97 95 VAL VAL A . n A 1 112 ARG 112 98 96 ARG ARG A . n A 1 113 ALA 113 99 97 ALA ALA A . n A 1 114 ASN 114 100 98 ASN ASN A . n A 1 115 ILE 115 101 99 ILE ILE A . n A 1 116 ALA 116 102 100 ALA ALA A . n A 1 117 ALA 117 103 101 ALA ALA A . n A 1 118 ILE 118 104 102 ILE ILE A . n A 1 119 THR 119 105 103 THR THR A . n A 1 120 GLU 120 106 104 GLU GLU A . n A 1 121 SER 121 107 105 SER SER A . n A 1 122 ASP 122 108 106 ASP ASP A . n A 1 123 LYS 123 109 107 LYS LYS A . n A 1 124 PHE 124 110 108 PHE PHE A . n A 1 125 PHE 125 111 109 PHE PHE A . n A 1 126 ILE 126 112 110 ILE ILE A . n A 1 127 ASN 127 113 111 ASN ASN A . n A 1 128 GLY 128 114 112 GLY GLY A . n A 1 129 SER 129 115 113 SER SER A . n A 1 130 ASN 130 116 114 ASN ASN A . n A 1 131 TRP 131 117 115 TRP TRP A . n A 1 132 GLU 132 118 116 GLU GLU A . n A 1 133 GLY 133 119 117 GLY GLY A . n A 1 134 ILE 134 120 118 ILE ILE A . n A 1 135 LEU 135 121 119 LEU LEU A . n A 1 136 GLY 136 122 120 GLY GLY A . n A 1 137 LEU 137 123 121 LEU LEU A . n A 1 138 ALA 138 124 122 ALA ALA A . n A 1 139 TYR 139 125 123 TYR TYR A . n A 1 140 ALA 140 126 124 ALA ALA A . n A 1 141 GLU 141 127 125 GLU GLU A . n A 1 142 ILE 142 128 126 ILE ILE A . n A 1 143 ALA 143 129 127 ALA ALA A . n A 1 144 ARG 144 130 128 ARG ARG A . n A 1 145 PRO 145 131 129 PRO PRO A . n A 1 146 ASP 146 132 130 ASP ASP A . n A 1 147 ASP 147 133 131 ASP ASP A . n A 1 148 SER 148 134 132 SER SER A . n A 1 149 LEU 149 135 133 LEU LEU A . n A 1 150 GLU 150 136 134 GLU GLU A . n A 1 151 PRO 151 137 135 PRO PRO A . n A 1 152 PHE 152 138 136 PHE PHE A . n A 1 153 PHE 153 139 137 PHE PHE A . n A 1 154 ASP 154 140 138 ASP ASP A . n A 1 155 SER 155 141 139 SER SER A . n A 1 156 LEU 156 142 140 LEU LEU A . n A 1 157 VAL 157 143 141 VAL VAL A . n A 1 158 LYS 158 144 142 LYS LYS A . n A 1 159 GLN 159 145 143 GLN GLN A . n A 1 160 THR 160 146 144 THR THR A . n A 1 161 HIS 161 147 145 HIS HIS A . n A 1 162 VAL 162 148 146 VAL VAL A . n A 1 163 PRO 163 149 147 PRO PRO A . n A 1 164 ASN 164 150 148 ASN ASN A . n A 1 165 LEU 165 151 149 LEU LEU A . n A 1 166 PHE 166 152 150 PHE PHE A . n A 1 167 SER 167 153 151 SER SER A . n A 1 168 LEU 168 154 152 LEU LEU A . n A 1 169 GLN 169 155 153 GLN GLN A . n A 1 170 LEU 170 156 154 LEU LEU A . n A 1 171 CYS 171 157 155 CYS CYS A . n A 1 172 GLY 172 158 156 GLY GLY A . n A 1 173 ALA 173 159 157 ALA ALA A . n A 1 174 GLY 174 159 ? ? ? A A n A 1 175 PHE 175 159 ? ? ? A B n A 1 176 PRO 176 159 ? ? ? A C n A 1 177 LEU 177 159 ? ? ? A D n A 1 178 ASN 178 159 ? ? ? A E n A 1 179 GLN 179 159 ? ? ? A F n A 1 180 SER 180 159 ? ? ? A G n A 1 181 GLU 181 159 ? ? ? A H n A 1 182 VAL 182 159 ? ? ? A I n A 1 183 LEU 183 159 ? ? ? A J n A 1 184 ALA 184 160 168 ALA ALA A . n A 1 185 SER 185 161 169 SER SER A . n A 1 186 VAL 186 162 170 VAL VAL A . n A 1 187 GLY 187 163 171 GLY GLY A . n A 1 188 GLY 188 164 172 GLY GLY A . n A 1 189 SER 189 165 173 SER SER A . n A 1 190 MET 190 166 174 MET MET A . n A 1 191 ILE 191 167 175 ILE ILE A . n A 1 192 ILE 192 168 176 ILE ILE A . n A 1 193 GLY 193 169 177 GLY GLY A . n A 1 194 GLY 194 170 178 GLY GLY A . n A 1 195 ILE 195 171 179 ILE ILE A . n A 1 196 ASP 196 172 180 ASP ASP A . n A 1 197 HIS 197 173 181 HIS HIS A . n A 1 198 SER 198 174 182 SER SER A . n A 1 199 LEU 199 175 183 LEU LEU A . n A 1 200 TYR 200 176 184 TYR TYR A . n A 1 201 THR 201 177 185 THR THR A . n A 1 202 GLY 202 178 186 GLY GLY A . n A 1 203 SER 203 179 187 SER SER A . n A 1 204 LEU 204 180 188 LEU LEU A . n A 1 205 TRP 205 181 189 TRP TRP A . n A 1 206 TYR 206 182 190 TYR TYR A . n A 1 207 THR 207 183 191 THR THR A . n A 1 208 PRO 208 184 192 PRO PRO A . n A 1 209 ILE 209 185 193 ILE ILE A . n A 1 210 ARG 210 186 194 ARG ARG A . n A 1 211 ARG 211 187 195 ARG ARG A . n A 1 212 GLU 212 188 196 GLU GLU A . n A 1 213 TRP 213 189 197 TRP TRP A . n A 1 214 TYR 214 190 198 TYR TYR A . n A 1 215 TYR 215 191 199 TYR TYR A . n A 1 216 GLU 216 192 200 GLU GLU A . n A 1 217 VAL 217 193 201 VAL VAL A . n A 1 218 ILE 218 194 202 ILE ILE A . n A 1 219 ILE 219 195 203 ILE ILE A . n A 1 220 VAL 220 196 204 VAL VAL A . n A 1 221 ARG 221 197 205 ARG ARG A . n A 1 222 VAL 222 198 206 VAL VAL A . n A 1 223 GLU 223 199 207 GLU GLU A . n A 1 224 ILE 224 200 208 ILE ILE A . n A 1 225 ASN 225 201 209 ASN ASN A . n A 1 226 GLY 226 202 210 GLY GLY A . n A 1 227 GLN 227 203 211 GLN GLN A . n A 1 228 ASP 228 204 212 ASP ASP A . n A 1 229 LEU 229 205 213 LEU LEU A . n A 1 230 LYS 230 206 214 LYS LYS A . n A 1 231 MET 231 207 215 MET MET A . n A 1 232 ASP 232 208 216 ASP ASP A . n A 1 233 CYS 233 209 217 CYS CYS A . n A 1 234 LYS 234 210 218 LYS LYS A . n A 1 235 GLU 235 211 219 GLU GLU A . n A 1 236 TYR 236 212 220 TYR TYR A . n A 1 237 ASN 237 213 221 ASN ASN A . n A 1 238 TYR 238 214 222 TYR TYR A . n A 1 239 ASP 239 215 223 ASP ASP A . n A 1 240 LYS 240 216 224 LYS LYS A . n A 1 241 SER 241 217 225 SER SER A . n A 1 242 ILE 242 218 226 ILE ILE A . n A 1 243 VAL 243 219 227 VAL VAL A . n A 1 244 ASP 244 220 228 ASP ASP A . n A 1 245 SER 245 221 229 SER SER A . n A 1 246 GLY 246 222 230 GLY GLY A . n A 1 247 THR 247 223 231 THR THR A . n A 1 248 THR 248 224 232 THR THR A . n A 1 249 ASN 249 225 233 ASN ASN A . n A 1 250 LEU 250 226 234 LEU LEU A . n A 1 251 ARG 251 227 235 ARG ARG A . n A 1 252 LEU 252 228 236 LEU LEU A . n A 1 253 PRO 253 229 237 PRO PRO A . n A 1 254 LYS 254 230 238 LYS LYS A . n A 1 255 LYS 255 231 239 LYS LYS A . n A 1 256 VAL 256 232 240 VAL VAL A . n A 1 257 PHE 257 233 241 PHE PHE A . n A 1 258 GLU 258 234 242 GLU GLU A . n A 1 259 ALA 259 235 243 ALA ALA A . n A 1 260 ALA 260 236 244 ALA ALA A . n A 1 261 VAL 261 237 245 VAL VAL A . n A 1 262 LYS 262 238 246 LYS LYS A . n A 1 263 SER 263 239 247 SER SER A . n A 1 264 ILE 264 240 248 ILE ILE A . n A 1 265 LYS 265 241 249 LYS LYS A . n A 1 266 ALA 266 242 250 ALA ALA A . n A 1 267 ALA 267 243 251 ALA ALA A . n A 1 268 SER 268 244 252 SER SER A . n A 1 269 SER 269 245 253 SER SER A . n A 1 270 THR 270 246 254 THR THR A . n A 1 271 GLU 271 247 255 GLU GLU A . n A 1 272 LYS 272 248 256 LYS LYS A . n A 1 273 PHE 273 249 257 PHE PHE A . n A 1 274 PRO 274 250 258 PRO PRO A . n A 1 275 ASP 275 251 259 ASP ASP A . n A 1 276 GLY 276 252 260 GLY GLY A . n A 1 277 PHE 277 253 261 PHE PHE A . n A 1 278 TRP 278 254 262 TRP TRP A . n A 1 279 LEU 279 255 263 LEU LEU A . n A 1 280 GLY 280 256 264 GLY GLY A . n A 1 281 GLU 281 257 265 GLU GLU A . n A 1 282 GLN 282 258 266 GLN GLN A . n A 1 283 LEU 283 259 267 LEU LEU A . n A 1 284 VAL 284 260 268 VAL VAL A . n A 1 285 CYS 285 261 269 CYS CYS A . n A 1 286 TRP 286 262 270 TRP TRP A . n A 1 287 GLN 287 263 271 GLN GLN A . n A 1 288 ALA 288 264 272 ALA ALA A . n A 1 289 GLY 289 265 273 GLY GLY A . n A 1 290 THR 290 266 274 THR THR A . n A 1 291 THR 291 267 275 THR THR A . n A 1 292 PRO 292 268 276 PRO PRO A . n A 1 293 TRP 293 269 277 TRP TRP A . n A 1 294 ASN 294 270 278 ASN ASN A . n A 1 295 ILE 295 271 279 ILE ILE A . n A 1 296 PHE 296 272 280 PHE PHE A . n A 1 297 PRO 297 273 281 PRO PRO A . n A 1 298 VAL 298 274 282 VAL VAL A . n A 1 299 ILE 299 275 283 ILE ILE A . n A 1 300 SER 300 276 284 SER SER A . n A 1 301 LEU 301 277 285 LEU LEU A . n A 1 302 TYR 302 278 286 TYR TYR A . n A 1 303 LEU 303 279 287 LEU LEU A . n A 1 304 MET 304 280 288 MET MET A . n A 1 305 GLY 305 281 289 GLY GLY A . n A 1 306 GLU 306 282 290 GLU GLU A . n A 1 307 VAL 307 283 291 VAL VAL A . n A 1 308 THR 308 284 292 THR THR A . n A 1 309 ASN 309 285 293 ASN ASN A . n A 1 310 GLN 310 286 294 GLN GLN A . n A 1 311 SER 311 287 295 SER SER A . n A 1 312 PHE 312 288 296 PHE PHE A . n A 1 313 ARG 313 289 297 ARG ARG A . n A 1 314 ILE 314 290 298 ILE ILE A . n A 1 315 THR 315 291 299 THR THR A . n A 1 316 ILE 316 292 300 ILE ILE A . n A 1 317 LEU 317 293 301 LEU LEU A . n A 1 318 PRO 318 294 302 PRO PRO A . n A 1 319 GLN 319 295 303 GLN GLN A . n A 1 320 GLN 320 296 304 GLN GLN A . n A 1 321 TYR 321 297 305 TYR TYR A . n A 1 322 LEU 322 298 306 LEU LEU A . n A 1 323 ARG 323 299 307 ARG ARG A . n A 1 324 PRO 324 300 308 PRO PRO A . n A 1 325 VAL 325 301 309 VAL VAL A . n A 1 326 GLU 326 302 310 GLU GLU A . n A 1 327 ASP 327 303 311 ASP ASP A . n A 1 328 VAL 328 303 ? ? ? A A n A 1 329 ALA 329 303 ? ? ? A B n A 1 330 THR 330 303 ? ? ? A C n A 1 331 SER 331 303 ? ? ? A D n A 1 332 GLN 332 303 ? ? ? A E n A 1 333 ASP 333 304 317 ASP ASP A . n A 1 334 ASP 334 305 318 ASP ASP A . n A 1 335 CYS 335 306 319 CYS CYS A . n A 1 336 TYR 336 307 320 TYR TYR A . n A 1 337 LYS 337 308 321 LYS LYS A . n A 1 338 PHE 338 309 322 PHE PHE A . n A 1 339 ALA 339 310 323 ALA ALA A . n A 1 340 ILE 340 311 324 ILE ILE A . n A 1 341 SER 341 312 325 SER SER A . n A 1 342 GLN 342 313 326 GLN GLN A . n A 1 343 SER 343 314 327 SER SER A . n A 1 344 SER 344 315 328 SER SER A . n A 1 345 THR 345 316 329 THR THR A . n A 1 346 GLY 346 317 330 GLY GLY A . n A 1 347 THR 347 318 331 THR THR A . n A 1 348 VAL 348 319 332 VAL VAL A . n A 1 349 MET 349 320 333 MET MET A . n A 1 350 GLY 350 321 334 GLY GLY A . n A 1 351 ALA 351 322 335 ALA ALA A . n A 1 352 VAL 352 323 336 VAL VAL A . n A 1 353 ILE 353 324 337 ILE ILE A . n A 1 354 MET 354 325 338 MET MET A . n A 1 355 GLU 355 326 339 GLU GLU A . n A 1 356 GLY 356 327 340 GLY GLY A . n A 1 357 PHE 357 328 341 PHE PHE A . n A 1 358 TYR 358 329 342 TYR TYR A . n A 1 359 VAL 359 330 343 VAL VAL A . n A 1 360 VAL 360 331 344 VAL VAL A . n A 1 361 PHE 361 332 345 PHE PHE A . n A 1 362 ASP 362 333 346 ASP ASP A . n A 1 363 ARG 363 334 347 ARG ARG A . n A 1 364 ALA 364 335 348 ALA ALA A . n A 1 365 ARG 365 336 349 ARG ARG A . n A 1 366 LYS 366 337 350 LYS LYS A . n A 1 367 ARG 367 338 351 ARG ARG A . n A 1 368 ILE 368 339 352 ILE ILE A . n A 1 369 GLY 369 340 353 GLY GLY A . n A 1 370 PHE 370 341 354 PHE PHE A . n A 1 371 ALA 371 342 355 ALA ALA A . n A 1 372 VAL 372 343 356 VAL VAL A . n A 1 373 SER 373 344 357 SER SER A . n A 1 374 ALA 374 345 358 ALA ALA A . n A 1 375 CYS 375 346 359 CYS CYS A . n A 1 376 HIS 376 347 360 HIS HIS A . n A 1 377 VAL 377 348 361 VAL VAL A . n A 1 378 HIS 378 349 362 HIS HIS A . n A 1 379 ASP 379 350 363 ASP ASP A . n A 1 380 GLU 380 351 364 GLU GLU A . n A 1 381 PHE 381 352 365 PHE PHE A . n A 1 382 ARG 382 353 366 ARG ARG A . n A 1 383 THR 383 354 367 THR THR A . n A 1 384 ALA 384 355 368 ALA ALA A . n A 1 385 ALA 385 356 369 ALA ALA A . n A 1 386 VAL 386 357 370 VAL VAL A . n A 1 387 GLU 387 358 371 GLU GLU A . n A 1 388 GLY 388 359 372 GLY GLY A . n A 1 389 PRO 389 360 373 PRO PRO A . n A 1 390 PHE 390 361 374 PHE PHE A . n A 1 391 VAL 391 362 375 VAL VAL A . n A 1 392 THR 392 363 376 THR THR A . n A 1 393 LEU 393 364 377 LEU LEU A . n A 1 394 ASP 394 365 378 ASP ASP A . n A 1 395 MET 395 366 379 MET MET A . n A 1 396 GLU 396 367 380 GLU GLU A . n A 1 397 ASP 397 368 381 ASP ASP A . n A 1 398 CYS 398 369 382 CYS CYS A . n A 1 399 GLY 399 370 383 GLY GLY A . n A 1 400 TYR 400 371 384 TYR TYR A . n A 1 401 ASN 401 372 385 ASN ASN A . n A 1 402 ILE 402 373 ? ? ? A . n A 1 403 PRO 403 374 ? ? ? A . n A 1 404 GLN 404 375 ? ? ? A . n A 1 405 THR 405 376 ? ? ? A . n A 1 406 ASP 406 377 ? ? ? A . n A 1 407 GLU 407 378 ? ? ? A . n A 1 408 SER 408 379 ? ? ? A . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2012-11-21 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 DENZO . ? program 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data reduction' http://www.hkl-xray.com/ ? ? 2 SCALEPACK . ? program 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data scaling' http://www.hkl-xray.com/ ? ? 3 CNS . ? package 'Axel T. Brunger' axel.brunger@yale.edu refinement http://cns-online.org/ Fortran_77 ? 4 PDB_EXTRACT 3.10 'June 10, 2010' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 5 CNX 2002 ? ? ? ? phasing ? ? ? 6 CNX 2002 ? ? ? ? refinement ? ? ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 6 ? ? 71.24 34.19 2 1 HIS A 91 ? ? -85.35 46.62 3 1 LEU A 151 ? ? -171.51 135.89 4 1 TRP A 189 ? ? -131.76 -81.49 5 1 ARG A 197 ? ? -171.03 145.21 6 1 ASN A 201 ? ? 47.59 18.47 7 1 THR A 316 ? ? -82.47 -152.48 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY -13 ? A GLY 1 2 1 Y 1 A PRO -12 ? A PRO 2 3 1 Y 1 A ASP -11 ? A ASP 3 4 1 Y 1 A GLU -10 ? A GLU 4 5 1 Y 1 A GLU -9 ? A GLU 5 6 1 Y 1 A PRO -8 ? A PRO 6 7 1 Y 1 A GLU -7 ? A GLU 7 8 1 Y 1 A GLU -6 ? A GLU 8 9 1 Y 1 A PRO -5 ? A PRO 9 10 1 Y 1 A GLY -4 ? A GLY 10 11 1 Y 1 A ARG -3 ? A ARG 11 12 1 Y 1 A ARG -2 ? A ARG 12 13 1 Y 1 A GLY 159 A A GLY 174 14 1 Y 1 A PHE 159 B A PHE 175 15 1 Y 1 A PRO 159 C A PRO 176 16 1 Y 1 A LEU 159 D A LEU 177 17 1 Y 1 A ASN 159 E A ASN 178 18 1 Y 1 A GLN 159 F A GLN 179 19 1 Y 1 A SER 159 G A SER 180 20 1 Y 1 A GLU 159 H A GLU 181 21 1 Y 1 A VAL 159 I A VAL 182 22 1 Y 1 A LEU 159 J A LEU 183 23 1 Y 1 A VAL 303 A A VAL 328 24 1 Y 1 A ALA 303 B A ALA 329 25 1 Y 1 A THR 303 C A THR 330 26 1 Y 1 A SER 303 D A SER 331 27 1 Y 1 A GLN 303 E A GLN 332 28 1 Y 1 A ILE 373 ? A ILE 402 29 1 Y 1 A PRO 374 ? A PRO 403 30 1 Y 1 A GLN 375 ? A GLN 404 31 1 Y 1 A THR 376 ? A THR 405 32 1 Y 1 A ASP 377 ? A ASP 406 33 1 Y 1 A GLU 378 ? A GLU 407 34 1 Y 1 A SER 379 ? A SER 408 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 ;(3R,4S,5S)-3-[(3-tert-butylbenzyl)amino]-5-[(4,4,7'-trifluoro-1',2'-dihydrospiro[cyclohexane-1,3'-indol]-5'-yl)methyl]tetrahydro-2H-thiopyran-4-ol 1,1-dioxide ; 0GU 3 'IODIDE ION' IOD 4 water HOH # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 0GU 1 401 1 0GU BVI A . C 3 IOD 1 402 1 IOD I1 A . D 4 HOH 1 501 1 HOH HOH A . D 4 HOH 2 502 2 HOH HOH A . D 4 HOH 3 503 3 HOH HOH A . D 4 HOH 4 504 4 HOH HOH A . D 4 HOH 5 505 5 HOH HOH A . D 4 HOH 6 506 6 HOH HOH A . D 4 HOH 7 507 7 HOH HOH A . D 4 HOH 8 508 8 HOH HOH A . D 4 HOH 9 509 9 HOH HOH A . D 4 HOH 10 510 10 HOH HOH A . D 4 HOH 11 511 11 HOH HOH A . D 4 HOH 12 512 12 HOH HOH A . D 4 HOH 13 513 13 HOH HOH A . D 4 HOH 14 514 14 HOH HOH A . D 4 HOH 15 515 15 HOH HOH A . D 4 HOH 16 516 16 HOH HOH A . D 4 HOH 17 517 17 HOH HOH A . D 4 HOH 18 518 18 HOH HOH A . D 4 HOH 19 519 19 HOH HOH A . D 4 HOH 20 520 20 HOH HOH A . D 4 HOH 21 521 21 HOH HOH A . D 4 HOH 22 522 22 HOH HOH A . D 4 HOH 23 523 23 HOH HOH A . D 4 HOH 24 524 24 HOH HOH A . D 4 HOH 25 525 25 HOH HOH A . D 4 HOH 26 526 26 HOH HOH A . D 4 HOH 27 527 27 HOH HOH A . D 4 HOH 28 528 28 HOH HOH A . D 4 HOH 29 529 29 HOH HOH A . D 4 HOH 30 530 30 HOH HOH A . D 4 HOH 31 531 31 HOH HOH A . D 4 HOH 32 532 32 HOH HOH A . D 4 HOH 33 533 33 HOH HOH A . D 4 HOH 34 534 34 HOH HOH A . D 4 HOH 35 535 35 HOH HOH A . D 4 HOH 36 536 36 HOH HOH A . D 4 HOH 37 537 37 HOH HOH A . D 4 HOH 38 538 38 HOH HOH A . D 4 HOH 39 539 39 HOH HOH A . D 4 HOH 40 540 40 HOH HOH A . D 4 HOH 41 541 41 HOH HOH A . D 4 HOH 42 542 42 HOH HOH A . D 4 HOH 43 543 43 HOH HOH A . D 4 HOH 44 544 44 HOH HOH A . D 4 HOH 45 545 45 HOH HOH A . D 4 HOH 46 546 46 HOH HOH A . D 4 HOH 47 547 47 HOH HOH A . D 4 HOH 48 548 48 HOH HOH A . D 4 HOH 49 549 49 HOH HOH A . D 4 HOH 50 550 50 HOH HOH A . D 4 HOH 51 551 51 HOH HOH A . D 4 HOH 52 552 52 HOH HOH A . D 4 HOH 53 553 53 HOH HOH A . D 4 HOH 54 554 54 HOH HOH A . D 4 HOH 55 555 55 HOH HOH A . D 4 HOH 56 556 56 HOH HOH A . D 4 HOH 57 557 57 HOH HOH A . D 4 HOH 58 558 58 HOH HOH A . D 4 HOH 59 559 59 HOH HOH A . D 4 HOH 60 560 60 HOH HOH A . D 4 HOH 61 561 61 HOH HOH A . D 4 HOH 62 562 62 HOH HOH A . D 4 HOH 63 563 63 HOH HOH A . D 4 HOH 64 564 64 HOH HOH A . D 4 HOH 65 565 65 HOH HOH A . D 4 HOH 66 566 66 HOH HOH A . D 4 HOH 67 567 67 HOH HOH A . D 4 HOH 68 568 68 HOH HOH A . D 4 HOH 69 569 69 HOH HOH A . D 4 HOH 70 570 70 HOH HOH A . D 4 HOH 71 571 71 HOH HOH A . D 4 HOH 72 572 72 HOH HOH A . D 4 HOH 73 573 73 HOH HOH A . D 4 HOH 74 574 74 HOH HOH A . D 4 HOH 75 575 75 HOH HOH A . D 4 HOH 76 576 76 HOH HOH A . D 4 HOH 77 577 77 HOH HOH A . D 4 HOH 78 578 78 HOH HOH A . D 4 HOH 79 579 79 HOH HOH A . D 4 HOH 80 580 80 HOH HOH A . D 4 HOH 81 581 81 HOH HOH A . D 4 HOH 82 582 82 HOH HOH A . D 4 HOH 83 583 83 HOH HOH A . D 4 HOH 84 584 84 HOH HOH A . D 4 HOH 85 585 85 HOH HOH A . D 4 HOH 86 586 86 HOH HOH A . D 4 HOH 87 587 87 HOH HOH A . D 4 HOH 88 588 88 HOH HOH A . D 4 HOH 89 589 89 HOH HOH A . D 4 HOH 90 590 90 HOH HOH A . D 4 HOH 91 591 91 HOH HOH A . D 4 HOH 92 592 92 HOH HOH A . D 4 HOH 93 593 93 HOH HOH A . D 4 HOH 94 594 94 HOH HOH A . D 4 HOH 95 595 95 HOH HOH A . D 4 HOH 96 596 96 HOH HOH A . #