HEADER TRANSFERASE 11-JAN-12 4D98 TITLE CRYSTAL STRUCTURE OF THE HEXAMERIC PURINE NUCLEOSIDE PHOSPHORYLASE TITLE 2 FROM BACILLUS SUBTILIS IN SPACE GROUP H32 AT PH 7.5 COMPND MOL_ID: 1; COMPND 2 MOLECULE: PURINE NUCLEOSIDE PHOSPHORYLASE DEOD-TYPE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: PNP, PURINE NUCLEOSIDE PHOSPHORYLASE II, PU-NPASE II; COMPND 5 EC: 2.4.2.1; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACILLUS SUBTILIS; SOURCE 3 ORGANISM_TAXID: 1423; SOURCE 4 GENE: BSU19630, DEOD, PUNB; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: ROSETTA; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET28A KEYWDS PHOSPHORYLASE/HYDROLASE-LIKE, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR C.R.SANTOS,A.N.MEZA,N.H.MARTINS,P.O.GIUSEPPE,M.T.MURAKAMI REVDAT 2 28-FEB-24 4D98 1 REMARK SEQADV REVDAT 1 26-SEP-12 4D98 0 JRNL AUTH P.O.DE GIUSEPPE,N.H.MARTINS,A.N.MEZA,C.R.DOS SANTOS, JRNL AUTH 2 H.D.PEREIRA,M.T.MURAKAMI JRNL TITL INSIGHTS INTO PHOSPHATE COOPERATIVITY AND INFLUENCE OF JRNL TITL 2 SUBSTRATE MODIFICATIONS ON BINDING AND CATALYSIS OF JRNL TITL 3 HEXAMERIC PURINE NUCLEOSIDE PHOSPHORYLASES. JRNL REF PLOS ONE V. 7 44282 2012 JRNL REFN ESSN 1932-6203 JRNL PMID 22957058 JRNL DOI 10.1371/JOURNAL.PONE.0044282 REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.81 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 95.1 REMARK 3 NUMBER OF REFLECTIONS : 46951 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.170 REMARK 3 R VALUE (WORKING SET) : 0.168 REMARK 3 FREE R VALUE : 0.206 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 2375 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.70 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.74 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3120 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 91.25 REMARK 3 BIN R VALUE (WORKING SET) : 0.2270 REMARK 3 BIN FREE R VALUE SET COUNT : 167 REMARK 3 BIN FREE R VALUE : 0.2700 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3522 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 18 REMARK 3 SOLVENT ATOMS : 334 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 24.03 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.00000 REMARK 3 B22 (A**2) : 0.00000 REMARK 3 B33 (A**2) : 0.00000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.110 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.108 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.064 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.892 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.968 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.954 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3687 ; 0.016 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5022 ; 1.557 ; 1.965 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 496 ; 5.816 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 156 ;37.358 ;24.872 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 644 ;13.781 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 17 ;17.658 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 595 ; 0.107 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2741 ; 0.008 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2334 ; 0.949 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3792 ; 1.727 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1353 ; 2.956 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1212 ; 5.046 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 4D98 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 19-JAN-12. REMARK 100 THE DEPOSITION ID IS D_1000070041. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : LNLS REMARK 200 BEAMLINE : W01B-MX2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : NULL REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 47177 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.700 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.5 REMARK 200 DATA REDUNDANCY : 8.000 REMARK 200 R MERGE (I) : 0.09300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.76 REMARK 200 COMPLETENESS FOR SHELL (%) : 92.6 REMARK 200 DATA REDUNDANCY IN SHELL : 7.00 REMARK 200 R MERGE FOR SHELL (I) : 0.38200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 40.06 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.05 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M HEPES, 1%(V/V) MPD, 2 M AMMONIUM REMARK 280 SULFATE, PH 7.5, VAPOR DIFFUSION, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z REMARK 290 6555 -X,-X+Y,-Z REMARK 290 7555 X+2/3,Y+1/3,Z+1/3 REMARK 290 8555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 9555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 10555 Y+2/3,X+1/3,-Z+1/3 REMARK 290 11555 X-Y+2/3,-Y+1/3,-Z+1/3 REMARK 290 12555 -X+2/3,-X+Y+1/3,-Z+1/3 REMARK 290 13555 X+1/3,Y+2/3,Z+2/3 REMARK 290 14555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 15555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 16555 Y+1/3,X+2/3,-Z+2/3 REMARK 290 17555 X-Y+1/3,-Y+2/3,-Z+2/3 REMARK 290 18555 -X+1/3,-X+Y+2/3,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 79.13000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 45.68573 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 31.28900 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 79.13000 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 45.68573 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 31.28900 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 79.13000 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 45.68573 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 31.28900 REMARK 290 SMTRY1 10 -0.500000 0.866025 0.000000 79.13000 REMARK 290 SMTRY2 10 0.866025 0.500000 0.000000 45.68573 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 31.28900 REMARK 290 SMTRY1 11 1.000000 0.000000 0.000000 79.13000 REMARK 290 SMTRY2 11 0.000000 -1.000000 0.000000 45.68573 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 31.28900 REMARK 290 SMTRY1 12 -0.500000 -0.866025 0.000000 79.13000 REMARK 290 SMTRY2 12 -0.866025 0.500000 0.000000 45.68573 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 31.28900 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 91.37145 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 62.57800 REMARK 290 SMTRY1 14 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 14 0.866025 -0.500000 0.000000 91.37145 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 62.57800 REMARK 290 SMTRY1 15 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 15 -0.866025 -0.500000 0.000000 91.37145 REMARK 290 SMTRY3 15 0.000000 0.000000 1.000000 62.57800 REMARK 290 SMTRY1 16 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 16 0.866025 0.500000 0.000000 91.37145 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 62.57800 REMARK 290 SMTRY1 17 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 17 0.000000 -1.000000 0.000000 91.37145 REMARK 290 SMTRY3 17 0.000000 0.000000 -1.000000 62.57800 REMARK 290 SMTRY1 18 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 18 -0.866025 0.500000 0.000000 91.37145 REMARK 290 SMTRY3 18 0.000000 0.000000 -1.000000 62.57800 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 24850 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 45030 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -307.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -19 REMARK 465 GLY A -18 REMARK 465 SER A -17 REMARK 465 SER A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 HIS A -10 REMARK 465 SER A -9 REMARK 465 SER A -8 REMARK 465 GLY A -7 REMARK 465 LEU A -6 REMARK 465 VAL A -5 REMARK 465 PRO A -4 REMARK 465 ARG A -3 REMARK 465 GLY A -2 REMARK 465 SER A -1 REMARK 465 HIS A 0 REMARK 465 MET A 1 REMARK 465 GLN A 233 REMARK 465 MET B -19 REMARK 465 GLY B -18 REMARK 465 SER B -17 REMARK 465 SER B -16 REMARK 465 HIS B -15 REMARK 465 HIS B -14 REMARK 465 HIS B -13 REMARK 465 HIS B -12 REMARK 465 HIS B -11 REMARK 465 HIS B -10 REMARK 465 SER B -9 REMARK 465 SER B -8 REMARK 465 GLY B -7 REMARK 465 LEU B -6 REMARK 465 VAL B -5 REMARK 465 PRO B -4 REMARK 465 ARG B -3 REMARK 465 GLY B -2 REMARK 465 SER B -1 REMARK 465 HIS B 0 REMARK 465 MET B 1 REMARK 465 GLN B 233 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 43 19.11 58.81 REMARK 500 GLU A 180 -27.63 -142.32 REMARK 500 ARG B 43 16.13 57.60 REMARK 500 GLU B 180 -28.25 -140.07 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL B 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 303 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4D8V RELATED DB: PDB REMARK 900 RELATED ID: 4D8X RELATED DB: PDB REMARK 900 RELATED ID: 4D8Y RELATED DB: PDB REMARK 900 RELATED ID: 4D9H RELATED DB: PDB REMARK 900 RELATED ID: 4DA0 RELATED DB: PDB REMARK 900 RELATED ID: 4DA6 RELATED DB: PDB REMARK 900 RELATED ID: 4DA7 RELATED DB: PDB REMARK 900 RELATED ID: 4DA8 RELATED DB: PDB REMARK 900 RELATED ID: 4DAB RELATED DB: PDB REMARK 900 RELATED ID: 4DAE RELATED DB: PDB REMARK 900 RELATED ID: 4DAN RELATED DB: PDB REMARK 900 RELATED ID: 4DAO RELATED DB: PDB REMARK 900 RELATED ID: 4DAR RELATED DB: PDB REMARK 999 REMARK 999 SEQUENCE REMARK 999 AUTHORS STATE THAT THIS IS A CLONING ARTIFACT DBREF 4D98 A 1 233 UNP O34925 DEOD_BACSU 1 233 DBREF 4D98 B 1 233 UNP O34925 DEOD_BACSU 1 233 SEQADV 4D98 MET A -19 UNP O34925 EXPRESSION TAG SEQADV 4D98 GLY A -18 UNP O34925 EXPRESSION TAG SEQADV 4D98 SER A -17 UNP O34925 EXPRESSION TAG SEQADV 4D98 SER A -16 UNP O34925 EXPRESSION TAG SEQADV 4D98 HIS A -15 UNP O34925 EXPRESSION TAG SEQADV 4D98 HIS A -14 UNP O34925 EXPRESSION TAG SEQADV 4D98 HIS A -13 UNP O34925 EXPRESSION TAG SEQADV 4D98 HIS A -12 UNP O34925 EXPRESSION TAG SEQADV 4D98 HIS A -11 UNP O34925 EXPRESSION TAG SEQADV 4D98 HIS A -10 UNP O34925 EXPRESSION TAG SEQADV 4D98 SER A -9 UNP O34925 EXPRESSION TAG SEQADV 4D98 SER A -8 UNP O34925 EXPRESSION TAG SEQADV 4D98 GLY A -7 UNP O34925 EXPRESSION TAG SEQADV 4D98 LEU A -6 UNP O34925 EXPRESSION TAG SEQADV 4D98 VAL A -5 UNP O34925 EXPRESSION TAG SEQADV 4D98 PRO A -4 UNP O34925 EXPRESSION TAG SEQADV 4D98 ARG A -3 UNP O34925 EXPRESSION TAG SEQADV 4D98 GLY A -2 UNP O34925 EXPRESSION TAG SEQADV 4D98 SER A -1 UNP O34925 EXPRESSION TAG SEQADV 4D98 HIS A 0 UNP O34925 EXPRESSION TAG SEQADV 4D98 ASP A 225 UNP O34925 GLU 225 SEE REMARK 999 SEQADV 4D98 MET B -19 UNP O34925 EXPRESSION TAG SEQADV 4D98 GLY B -18 UNP O34925 EXPRESSION TAG SEQADV 4D98 SER B -17 UNP O34925 EXPRESSION TAG SEQADV 4D98 SER B -16 UNP O34925 EXPRESSION TAG SEQADV 4D98 HIS B -15 UNP O34925 EXPRESSION TAG SEQADV 4D98 HIS B -14 UNP O34925 EXPRESSION TAG SEQADV 4D98 HIS B -13 UNP O34925 EXPRESSION TAG SEQADV 4D98 HIS B -12 UNP O34925 EXPRESSION TAG SEQADV 4D98 HIS B -11 UNP O34925 EXPRESSION TAG SEQADV 4D98 HIS B -10 UNP O34925 EXPRESSION TAG SEQADV 4D98 SER B -9 UNP O34925 EXPRESSION TAG SEQADV 4D98 SER B -8 UNP O34925 EXPRESSION TAG SEQADV 4D98 GLY B -7 UNP O34925 EXPRESSION TAG SEQADV 4D98 LEU B -6 UNP O34925 EXPRESSION TAG SEQADV 4D98 VAL B -5 UNP O34925 EXPRESSION TAG SEQADV 4D98 PRO B -4 UNP O34925 EXPRESSION TAG SEQADV 4D98 ARG B -3 UNP O34925 EXPRESSION TAG SEQADV 4D98 GLY B -2 UNP O34925 EXPRESSION TAG SEQADV 4D98 SER B -1 UNP O34925 EXPRESSION TAG SEQADV 4D98 HIS B 0 UNP O34925 EXPRESSION TAG SEQADV 4D98 ASP B 225 UNP O34925 GLU 225 SEE REMARK 999 SEQRES 1 A 253 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 253 LEU VAL PRO ARG GLY SER HIS MET SER VAL HIS ILE GLY SEQRES 3 A 253 ALA GLU LYS GLY GLN ILE ALA ASP THR VAL LEU LEU PRO SEQRES 4 A 253 GLY ASP PRO LEU ARG ALA LYS PHE ILE ALA GLU THR TYR SEQRES 5 A 253 LEU GLU ASN VAL GLU CYS TYR ASN GLU VAL ARG GLY MET SEQRES 6 A 253 TYR GLY PHE THR GLY THR TYR LYS GLY LYS LYS ILE SER SEQRES 7 A 253 VAL GLN GLY THR GLY MET GLY VAL PRO SER ILE SER ILE SEQRES 8 A 253 TYR VAL ASN GLU LEU ILE GLN SER TYR ASP VAL GLN ASN SEQRES 9 A 253 LEU ILE ARG VAL GLY SER CYS GLY ALA ILE ARG LYS ASP SEQRES 10 A 253 VAL LYS VAL ARG ASP VAL ILE LEU ALA MET THR SER SER SEQRES 11 A 253 THR ASP SER GLN MET ASN ARG VAL ALA PHE GLY SER VAL SEQRES 12 A 253 ASP PHE ALA PRO CYS ALA ASP PHE GLU LEU LEU LYS ASN SEQRES 13 A 253 ALA TYR ASP ALA ALA LYS ASP LYS GLY VAL PRO VAL THR SEQRES 14 A 253 VAL GLY SER VAL PHE THR ALA ASP GLN PHE TYR ASN ASP SEQRES 15 A 253 ASP SER GLN ILE GLU LYS LEU ALA LYS TYR GLY VAL LEU SEQRES 16 A 253 GLY VAL GLU MET GLU THR THR ALA LEU TYR THR LEU ALA SEQRES 17 A 253 ALA LYS HIS GLY ARG LYS ALA LEU SER ILE LEU THR VAL SEQRES 18 A 253 SER ASP HIS VAL LEU THR GLY GLU GLU THR THR ALA GLU SEQRES 19 A 253 GLU ARG GLN THR THR PHE HIS ASP MET ILE ASP VAL ALA SEQRES 20 A 253 LEU HIS SER VAL SER GLN SEQRES 1 B 253 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 B 253 LEU VAL PRO ARG GLY SER HIS MET SER VAL HIS ILE GLY SEQRES 3 B 253 ALA GLU LYS GLY GLN ILE ALA ASP THR VAL LEU LEU PRO SEQRES 4 B 253 GLY ASP PRO LEU ARG ALA LYS PHE ILE ALA GLU THR TYR SEQRES 5 B 253 LEU GLU ASN VAL GLU CYS TYR ASN GLU VAL ARG GLY MET SEQRES 6 B 253 TYR GLY PHE THR GLY THR TYR LYS GLY LYS LYS ILE SER SEQRES 7 B 253 VAL GLN GLY THR GLY MET GLY VAL PRO SER ILE SER ILE SEQRES 8 B 253 TYR VAL ASN GLU LEU ILE GLN SER TYR ASP VAL GLN ASN SEQRES 9 B 253 LEU ILE ARG VAL GLY SER CYS GLY ALA ILE ARG LYS ASP SEQRES 10 B 253 VAL LYS VAL ARG ASP VAL ILE LEU ALA MET THR SER SER SEQRES 11 B 253 THR ASP SER GLN MET ASN ARG VAL ALA PHE GLY SER VAL SEQRES 12 B 253 ASP PHE ALA PRO CYS ALA ASP PHE GLU LEU LEU LYS ASN SEQRES 13 B 253 ALA TYR ASP ALA ALA LYS ASP LYS GLY VAL PRO VAL THR SEQRES 14 B 253 VAL GLY SER VAL PHE THR ALA ASP GLN PHE TYR ASN ASP SEQRES 15 B 253 ASP SER GLN ILE GLU LYS LEU ALA LYS TYR GLY VAL LEU SEQRES 16 B 253 GLY VAL GLU MET GLU THR THR ALA LEU TYR THR LEU ALA SEQRES 17 B 253 ALA LYS HIS GLY ARG LYS ALA LEU SER ILE LEU THR VAL SEQRES 18 B 253 SER ASP HIS VAL LEU THR GLY GLU GLU THR THR ALA GLU SEQRES 19 B 253 GLU ARG GLN THR THR PHE HIS ASP MET ILE ASP VAL ALA SEQRES 20 B 253 LEU HIS SER VAL SER GLN HET SO4 A 301 5 HET CL A 302 1 HET SO4 B 301 5 HET CL B 302 1 HET GOL B 303 6 HETNAM SO4 SULFATE ION HETNAM CL CHLORIDE ION HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 SO4 2(O4 S 2-) FORMUL 4 CL 2(CL 1-) FORMUL 7 GOL C3 H8 O3 FORMUL 8 HOH *334(H2 O) HELIX 1 1 ASP A 21 LEU A 33 1 13 HELIX 2 2 GLU A 41 MET A 45 5 5 HELIX 3 3 GLY A 65 ASP A 81 1 17 HELIX 4 4 GLN A 114 GLY A 121 1 8 HELIX 5 5 ASP A 130 LYS A 144 1 15 HELIX 6 6 GLN A 165 TYR A 172 1 8 HELIX 7 7 GLU A 180 HIS A 191 1 12 HELIX 8 8 THR A 212 HIS A 229 1 18 HELIX 9 9 ASP B 21 LEU B 33 1 13 HELIX 10 10 GLU B 41 MET B 45 5 5 HELIX 11 11 GLY B 65 SER B 79 1 15 HELIX 12 12 GLN B 114 GLY B 121 1 8 HELIX 13 13 ASP B 130 GLY B 145 1 16 HELIX 14 14 GLN B 165 TYR B 172 1 8 HELIX 15 15 GLU B 180 HIS B 191 1 12 HELIX 16 16 THR B 212 THR B 219 1 8 HELIX 17 17 PHE B 220 VAL B 231 1 12 SHEET 1 A10 GLU A 34 ASN A 40 0 SHEET 2 A10 GLY A 47 TYR A 52 -1 O THR A 49 N GLU A 37 SHEET 3 A10 LYS A 55 GLN A 60 -1 O ILE A 57 N GLY A 50 SHEET 4 A10 THR A 15 LEU A 18 1 N LEU A 17 O SER A 58 SHEET 5 A10 ASN A 84 ALA A 93 1 O ILE A 86 N LEU A 18 SHEET 6 A10 LYS A 194 HIS A 204 1 O THR A 200 N GLY A 89 SHEET 7 A10 VAL A 103 THR A 111 -1 N ILE A 104 O LEU A 199 SHEET 8 A10 VAL A 148 THR A 155 1 O THR A 155 N SER A 110 SHEET 9 A10 GLY A 176 GLU A 178 1 O GLU A 178 N PHE A 154 SHEET 10 A10 ASN A 84 ALA A 93 -1 N GLY A 92 O VAL A 177 SHEET 1 B10 GLU B 34 ASN B 40 0 SHEET 2 B10 GLY B 47 TYR B 52 -1 O THR B 49 N GLU B 37 SHEET 3 B10 LYS B 55 GLN B 60 -1 O ILE B 57 N GLY B 50 SHEET 4 B10 THR B 15 LEU B 18 1 N LEU B 17 O SER B 58 SHEET 5 B10 ASN B 84 ALA B 93 1 O ILE B 86 N VAL B 16 SHEET 6 B10 LYS B 194 HIS B 204 1 O ILE B 198 N ARG B 87 SHEET 7 B10 VAL B 103 THR B 111 -1 N ILE B 104 O LEU B 199 SHEET 8 B10 VAL B 148 THR B 155 1 O THR B 155 N SER B 110 SHEET 9 B10 GLY B 176 GLU B 178 1 O GLU B 178 N PHE B 154 SHEET 10 B10 ASN B 84 ALA B 93 -1 N GLY B 92 O VAL B 177 SITE 1 AC1 9 GLY A 20 ARG A 87 GLY A 89 SER A 90 SITE 2 AC1 9 HOH A 444 HOH A 473 HOH A 475 HOH A 485 SITE 3 AC1 9 ARG B 43 SITE 1 AC2 4 PHE A 154 ASN A 161 SER A 164 HOH A 478 SITE 1 AC3 7 ARG A 43 GLY B 20 ARG B 24 ARG B 87 SITE 2 AC3 7 GLY B 89 SER B 90 HOH B 478 SITE 1 AC4 4 PHE B 154 ASN B 161 SER B 164 HOH B 485 SITE 1 AC5 5 GLY A 192 HOH A 525 HOH A 565 ARG B 95 SITE 2 AC5 5 LYS B 96 CRYST1 158.260 158.260 93.867 90.00 90.00 120.00 H 3 2 36 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006319 0.003648 0.000000 0.00000 SCALE2 0.000000 0.007296 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010653 0.00000