data_4D9T # _entry.id 4D9T # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.399 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4D9T pdb_00004d9t 10.2210/pdb4d9t/pdb RCSB RCSB070062 ? ? WWPDB D_1000070062 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2012-04-25 2 'Structure model' 1 1 2012-05-16 3 'Structure model' 1 2 2024-11-20 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' pdbx_entry_details 5 3 'Structure model' pdbx_modification_feature 6 3 'Structure model' pdbx_struct_conn_angle 7 3 'Structure model' struct_conn 8 3 'Structure model' struct_ref_seq_dif 9 3 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 4 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 5 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 6 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 7 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 8 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 9 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 10 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 11 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 12 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 13 3 'Structure model' '_pdbx_struct_conn_angle.value' 14 3 'Structure model' '_struct_conn.pdbx_dist_value' 15 3 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 16 3 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 17 3 'Structure model' '_struct_conn.ptnr1_label_atom_id' 18 3 'Structure model' '_struct_conn.ptnr1_label_comp_id' 19 3 'Structure model' '_struct_conn.ptnr1_label_seq_id' 20 3 'Structure model' '_struct_ref_seq_dif.details' 21 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 22 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 23 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.entry_id 4D9T _pdbx_database_status.status_code REL _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2012-01-12 _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 4D9U _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Serafimova, I.M.' 1 'Pufall, M.A.' 2 'Krishnan, S.' 3 'Duda, K.' 4 'Cohen, M.S.' 5 'Maglathlin, R.L.' 6 'McFarland, J.M.' 7 'Miller, R.M.' 8 'Frodin, M.' 9 'Taunton, J.' 10 # _citation.id primary _citation.title 'Reversible targeting of noncatalytic cysteines with chemically tuned electrophiles.' _citation.journal_abbrev Nat.Chem.Biol. _citation.journal_volume 8 _citation.page_first 471 _citation.page_last 476 _citation.year 2012 _citation.journal_id_ASTM ? _citation.country US _citation.journal_id_ISSN 1552-4450 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 22466421 _citation.pdbx_database_id_DOI 10.1038/nchembio.925 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Serafimova, I.M.' 1 ? primary 'Pufall, M.A.' 2 ? primary 'Krishnan, S.' 3 ? primary 'Duda, K.' 4 ? primary 'Cohen, M.S.' 5 ? primary 'Maglathlin, R.L.' 6 ? primary 'McFarland, J.M.' 7 ? primary 'Miller, R.M.' 8 ? primary 'Frodin, M.' 9 ? primary 'Taunton, J.' 10 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Ribosomal protein S6 kinase alpha-3' 38478.930 1 2.7.11.1 ? 'C-terminal kinase domain, UNP residues 399-740' ? 2 non-polymer syn 'methyl (2S)-3-{4-amino-7-[(1E)-3-hydroxyprop-1-en-1-yl]-5-(4-methylphenyl)-7H-pyrrolo[2,3-d]pyrimidin-6-yl}-2-cyanopropanoate' 391.423 1 ? ? ? ? 3 non-polymer syn 'SODIUM ION' 22.990 1 ? ? ? ? 4 water nat water 18.015 24 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name ;S6K-alpha-3, 90 kDa ribosomal protein S6 kinase 3, p90-RSK 3, p90RSK3, Insulin-stimulated protein kinase 1, ISPK-1, MAP kinase-activated protein kinase 1b, MAPK-activated protein kinase 1b, MAPKAP kinase 1b, MAPKAPK-1b, Ribosomal S6 kinase 2, RSK-2, pp90RSK2 ; # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MQTVGVHSIVQQLHRNSIQFTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDPTEEIEILLRYGQHPNIIT LKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIR ICDFGFAKQLRAENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKF SLSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRHPWIVHWDQLPQYQLNRQDAPHLVKGAMAATYSALNRNQSPVL EPVGRSTLAQRRGIKKITSTAL ; _entity_poly.pdbx_seq_one_letter_code_can ;MQTVGVHSIVQQLHRNSIQFTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDPTEEIEILLRYGQHPNIIT LKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIR ICDFGFAKQLRAENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKF SLSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRHPWIVHWDQLPQYQLNRQDAPHLVKGAMAATYSALNRNQSPVL EPVGRSTLAQRRGIKKITSTAL ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'methyl (2S)-3-{4-amino-7-[(1E)-3-hydroxyprop-1-en-1-yl]-5-(4-methylphenyl)-7H-pyrrolo[2,3-d]pyrimidin-6-yl}-2-cyanopropanoate' 0JG 3 'SODIUM ION' NA 4 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 GLN n 1 3 THR n 1 4 VAL n 1 5 GLY n 1 6 VAL n 1 7 HIS n 1 8 SER n 1 9 ILE n 1 10 VAL n 1 11 GLN n 1 12 GLN n 1 13 LEU n 1 14 HIS n 1 15 ARG n 1 16 ASN n 1 17 SER n 1 18 ILE n 1 19 GLN n 1 20 PHE n 1 21 THR n 1 22 ASP n 1 23 GLY n 1 24 TYR n 1 25 GLU n 1 26 VAL n 1 27 LYS n 1 28 GLU n 1 29 ASP n 1 30 ILE n 1 31 GLY n 1 32 VAL n 1 33 GLY n 1 34 SER n 1 35 TYR n 1 36 SER n 1 37 VAL n 1 38 CYS n 1 39 LYS n 1 40 ARG n 1 41 CYS n 1 42 ILE n 1 43 HIS n 1 44 LYS n 1 45 ALA n 1 46 THR n 1 47 ASN n 1 48 MET n 1 49 GLU n 1 50 PHE n 1 51 ALA n 1 52 VAL n 1 53 LYS n 1 54 ILE n 1 55 ILE n 1 56 ASP n 1 57 LYS n 1 58 SER n 1 59 LYS n 1 60 ARG n 1 61 ASP n 1 62 PRO n 1 63 THR n 1 64 GLU n 1 65 GLU n 1 66 ILE n 1 67 GLU n 1 68 ILE n 1 69 LEU n 1 70 LEU n 1 71 ARG n 1 72 TYR n 1 73 GLY n 1 74 GLN n 1 75 HIS n 1 76 PRO n 1 77 ASN n 1 78 ILE n 1 79 ILE n 1 80 THR n 1 81 LEU n 1 82 LYS n 1 83 ASP n 1 84 VAL n 1 85 TYR n 1 86 ASP n 1 87 ASP n 1 88 GLY n 1 89 LYS n 1 90 TYR n 1 91 VAL n 1 92 TYR n 1 93 VAL n 1 94 VAL n 1 95 THR n 1 96 GLU n 1 97 LEU n 1 98 MET n 1 99 LYS n 1 100 GLY n 1 101 GLY n 1 102 GLU n 1 103 LEU n 1 104 LEU n 1 105 ASP n 1 106 LYS n 1 107 ILE n 1 108 LEU n 1 109 ARG n 1 110 GLN n 1 111 LYS n 1 112 PHE n 1 113 PHE n 1 114 SER n 1 115 GLU n 1 116 ARG n 1 117 GLU n 1 118 ALA n 1 119 SER n 1 120 ALA n 1 121 VAL n 1 122 LEU n 1 123 PHE n 1 124 THR n 1 125 ILE n 1 126 THR n 1 127 LYS n 1 128 THR n 1 129 VAL n 1 130 GLU n 1 131 TYR n 1 132 LEU n 1 133 HIS n 1 134 ALA n 1 135 GLN n 1 136 GLY n 1 137 VAL n 1 138 VAL n 1 139 HIS n 1 140 ARG n 1 141 ASP n 1 142 LEU n 1 143 LYS n 1 144 PRO n 1 145 SER n 1 146 ASN n 1 147 ILE n 1 148 LEU n 1 149 TYR n 1 150 VAL n 1 151 ASP n 1 152 GLU n 1 153 SER n 1 154 GLY n 1 155 ASN n 1 156 PRO n 1 157 GLU n 1 158 SER n 1 159 ILE n 1 160 ARG n 1 161 ILE n 1 162 CYS n 1 163 ASP n 1 164 PHE n 1 165 GLY n 1 166 PHE n 1 167 ALA n 1 168 LYS n 1 169 GLN n 1 170 LEU n 1 171 ARG n 1 172 ALA n 1 173 GLU n 1 174 ASN n 1 175 GLY n 1 176 LEU n 1 177 LEU n 1 178 MET n 1 179 THR n 1 180 PRO n 1 181 CYS n 1 182 TYR n 1 183 THR n 1 184 ALA n 1 185 ASN n 1 186 PHE n 1 187 VAL n 1 188 ALA n 1 189 PRO n 1 190 GLU n 1 191 VAL n 1 192 LEU n 1 193 GLU n 1 194 ARG n 1 195 GLN n 1 196 GLY n 1 197 TYR n 1 198 ASP n 1 199 ALA n 1 200 ALA n 1 201 CYS n 1 202 ASP n 1 203 ILE n 1 204 TRP n 1 205 SER n 1 206 LEU n 1 207 GLY n 1 208 VAL n 1 209 LEU n 1 210 LEU n 1 211 TYR n 1 212 THR n 1 213 MET n 1 214 LEU n 1 215 THR n 1 216 GLY n 1 217 TYR n 1 218 THR n 1 219 PRO n 1 220 PHE n 1 221 ALA n 1 222 ASN n 1 223 GLY n 1 224 PRO n 1 225 ASP n 1 226 ASP n 1 227 THR n 1 228 PRO n 1 229 GLU n 1 230 GLU n 1 231 ILE n 1 232 LEU n 1 233 ALA n 1 234 ARG n 1 235 ILE n 1 236 GLY n 1 237 SER n 1 238 GLY n 1 239 LYS n 1 240 PHE n 1 241 SER n 1 242 LEU n 1 243 SER n 1 244 GLY n 1 245 GLY n 1 246 TYR n 1 247 TRP n 1 248 ASN n 1 249 SER n 1 250 VAL n 1 251 SER n 1 252 ASP n 1 253 THR n 1 254 ALA n 1 255 LYS n 1 256 ASP n 1 257 LEU n 1 258 VAL n 1 259 SER n 1 260 LYS n 1 261 MET n 1 262 LEU n 1 263 HIS n 1 264 VAL n 1 265 ASP n 1 266 PRO n 1 267 HIS n 1 268 GLN n 1 269 ARG n 1 270 LEU n 1 271 THR n 1 272 ALA n 1 273 ALA n 1 274 LEU n 1 275 VAL n 1 276 LEU n 1 277 ARG n 1 278 HIS n 1 279 PRO n 1 280 TRP n 1 281 ILE n 1 282 VAL n 1 283 HIS n 1 284 TRP n 1 285 ASP n 1 286 GLN n 1 287 LEU n 1 288 PRO n 1 289 GLN n 1 290 TYR n 1 291 GLN n 1 292 LEU n 1 293 ASN n 1 294 ARG n 1 295 GLN n 1 296 ASP n 1 297 ALA n 1 298 PRO n 1 299 HIS n 1 300 LEU n 1 301 VAL n 1 302 LYS n 1 303 GLY n 1 304 ALA n 1 305 MET n 1 306 ALA n 1 307 ALA n 1 308 THR n 1 309 TYR n 1 310 SER n 1 311 ALA n 1 312 LEU n 1 313 ASN n 1 314 ARG n 1 315 ASN n 1 316 GLN n 1 317 SER n 1 318 PRO n 1 319 VAL n 1 320 LEU n 1 321 GLU n 1 322 PRO n 1 323 VAL n 1 324 GLY n 1 325 ARG n 1 326 SER n 1 327 THR n 1 328 LEU n 1 329 ALA n 1 330 GLN n 1 331 ARG n 1 332 ARG n 1 333 GLY n 1 334 ILE n 1 335 LYS n 1 336 LYS n 1 337 ILE n 1 338 THR n 1 339 SER n 1 340 THR n 1 341 ALA n 1 342 LEU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'ISPK1, MAPKAPK1B, RPS6KA3, RSK2' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET46 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 0JG non-polymer . 'methyl (2S)-3-{4-amino-7-[(1E)-3-hydroxyprop-1-en-1-yl]-5-(4-methylphenyl)-7H-pyrrolo[2,3-d]pyrimidin-6-yl}-2-cyanopropanoate' '(E)-methyl 3-(4-amino-7-(3-hydroxypropyl)-5-p-tolyl-7H-pyrrolo[2,3-d]pyrimidin-6-yl)-2-cyanoacrylate' 'C21 H21 N5 O3' 391.423 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NA non-polymer . 'SODIUM ION' ? 'Na 1' 22.990 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 399 ? ? ? A . n A 1 2 GLN 2 400 ? ? ? A . n A 1 3 THR 3 401 ? ? ? A . n A 1 4 VAL 4 402 ? ? ? A . n A 1 5 GLY 5 403 ? ? ? A . n A 1 6 VAL 6 404 ? ? ? A . n A 1 7 HIS 7 405 ? ? ? A . n A 1 8 SER 8 406 ? ? ? A . n A 1 9 ILE 9 407 ? ? ? A . n A 1 10 VAL 10 408 ? ? ? A . n A 1 11 GLN 11 409 ? ? ? A . n A 1 12 GLN 12 410 ? ? ? A . n A 1 13 LEU 13 411 ? ? ? A . n A 1 14 HIS 14 412 ? ? ? A . n A 1 15 ARG 15 413 ? ? ? A . n A 1 16 ASN 16 414 ? ? ? A . n A 1 17 SER 17 415 415 SER ALA A . n A 1 18 ILE 18 416 416 ILE ILE A . n A 1 19 GLN 19 417 417 GLN GLN A . n A 1 20 PHE 20 418 418 PHE PHE A . n A 1 21 THR 21 419 419 THR THR A . n A 1 22 ASP 22 420 420 ASP ASP A . n A 1 23 GLY 23 421 421 GLY GLY A . n A 1 24 TYR 24 422 422 TYR TYR A . n A 1 25 GLU 25 423 423 GLU GLU A . n A 1 26 VAL 26 424 424 VAL VAL A . n A 1 27 LYS 27 425 425 LYS LYS A . n A 1 28 GLU 28 426 426 GLU GLU A . n A 1 29 ASP 29 427 427 ASP ASP A . n A 1 30 ILE 30 428 428 ILE ILE A . n A 1 31 GLY 31 429 429 GLY GLY A . n A 1 32 VAL 32 430 430 VAL VAL A . n A 1 33 GLY 33 431 431 GLY GLY A . n A 1 34 SER 34 432 432 SER SER A . n A 1 35 TYR 35 433 433 TYR TYR A . n A 1 36 SER 36 434 434 SER SER A . n A 1 37 VAL 37 435 435 VAL VAL A . n A 1 38 CYS 38 436 436 CYS CYS A . n A 1 39 LYS 39 437 437 LYS LYS A . n A 1 40 ARG 40 438 438 ARG ARG A . n A 1 41 CYS 41 439 439 CYS CYS A . n A 1 42 ILE 42 440 440 ILE ILE A . n A 1 43 HIS 43 441 441 HIS HIS A . n A 1 44 LYS 44 442 442 LYS LYS A . n A 1 45 ALA 45 443 443 ALA ALA A . n A 1 46 THR 46 444 444 THR THR A . n A 1 47 ASN 47 445 445 ASN ASN A . n A 1 48 MET 48 446 446 MET MET A . n A 1 49 GLU 49 447 447 GLU GLU A . n A 1 50 PHE 50 448 448 PHE PHE A . n A 1 51 ALA 51 449 449 ALA ALA A . n A 1 52 VAL 52 450 450 VAL VAL A . n A 1 53 LYS 53 451 451 LYS LYS A . n A 1 54 ILE 54 452 452 ILE ILE A . n A 1 55 ILE 55 453 453 ILE ILE A . n A 1 56 ASP 56 454 454 ASP ASP A . n A 1 57 LYS 57 455 455 LYS LYS A . n A 1 58 SER 58 456 456 SER SER A . n A 1 59 LYS 59 457 457 LYS LYS A . n A 1 60 ARG 60 458 458 ARG ARG A . n A 1 61 ASP 61 459 459 ASP ASP A . n A 1 62 PRO 62 460 460 PRO PRO A . n A 1 63 THR 63 461 461 THR THR A . n A 1 64 GLU 64 462 462 GLU GLU A . n A 1 65 GLU 65 463 463 GLU GLU A . n A 1 66 ILE 66 464 464 ILE ILE A . n A 1 67 GLU 67 465 465 GLU GLU A . n A 1 68 ILE 68 466 466 ILE ILE A . n A 1 69 LEU 69 467 467 LEU LEU A . n A 1 70 LEU 70 468 468 LEU LEU A . n A 1 71 ARG 71 469 469 ARG ARG A . n A 1 72 TYR 72 470 470 TYR TYR A . n A 1 73 GLY 73 471 471 GLY GLY A . n A 1 74 GLN 74 472 472 GLN GLN A . n A 1 75 HIS 75 473 473 HIS HIS A . n A 1 76 PRO 76 474 474 PRO PRO A . n A 1 77 ASN 77 475 475 ASN ASN A . n A 1 78 ILE 78 476 476 ILE ILE A . n A 1 79 ILE 79 477 477 ILE ILE A . n A 1 80 THR 80 478 478 THR THR A . n A 1 81 LEU 81 479 479 LEU LEU A . n A 1 82 LYS 82 480 480 LYS LYS A . n A 1 83 ASP 83 481 481 ASP ASP A . n A 1 84 VAL 84 482 482 VAL VAL A . n A 1 85 TYR 85 483 483 TYR TYR A . n A 1 86 ASP 86 484 484 ASP ASP A . n A 1 87 ASP 87 485 485 ASP ASP A . n A 1 88 GLY 88 486 486 GLY GLY A . n A 1 89 LYS 89 487 487 LYS LYS A . n A 1 90 TYR 90 488 488 TYR TYR A . n A 1 91 VAL 91 489 489 VAL VAL A . n A 1 92 TYR 92 490 490 TYR TYR A . n A 1 93 VAL 93 491 491 VAL VAL A . n A 1 94 VAL 94 492 492 VAL VAL A . n A 1 95 THR 95 493 493 THR THR A . n A 1 96 GLU 96 494 494 GLU GLU A . n A 1 97 LEU 97 495 495 LEU LEU A . n A 1 98 MET 98 496 496 MET MET A . n A 1 99 LYS 99 497 497 LYS LYS A . n A 1 100 GLY 100 498 498 GLY GLY A . n A 1 101 GLY 101 499 499 GLY GLY A . n A 1 102 GLU 102 500 500 GLU GLU A . n A 1 103 LEU 103 501 501 LEU LEU A . n A 1 104 LEU 104 502 502 LEU LEU A . n A 1 105 ASP 105 503 503 ASP ASP A . n A 1 106 LYS 106 504 504 LYS LYS A . n A 1 107 ILE 107 505 505 ILE ILE A . n A 1 108 LEU 108 506 506 LEU LEU A . n A 1 109 ARG 109 507 507 ARG ARG A . n A 1 110 GLN 110 508 508 GLN GLN A . n A 1 111 LYS 111 509 509 LYS LYS A . n A 1 112 PHE 112 510 510 PHE PHE A . n A 1 113 PHE 113 511 511 PHE PHE A . n A 1 114 SER 114 512 512 SER SER A . n A 1 115 GLU 115 513 513 GLU GLU A . n A 1 116 ARG 116 514 514 ARG ARG A . n A 1 117 GLU 117 515 515 GLU GLU A . n A 1 118 ALA 118 516 516 ALA ALA A . n A 1 119 SER 119 517 517 SER SER A . n A 1 120 ALA 120 518 518 ALA ALA A . n A 1 121 VAL 121 519 519 VAL VAL A . n A 1 122 LEU 122 520 520 LEU LEU A . n A 1 123 PHE 123 521 521 PHE PHE A . n A 1 124 THR 124 522 522 THR THR A . n A 1 125 ILE 125 523 523 ILE ILE A . n A 1 126 THR 126 524 524 THR THR A . n A 1 127 LYS 127 525 525 LYS LYS A . n A 1 128 THR 128 526 526 THR THR A . n A 1 129 VAL 129 527 527 VAL VAL A . n A 1 130 GLU 130 528 528 GLU GLU A . n A 1 131 TYR 131 529 529 TYR TYR A . n A 1 132 LEU 132 530 530 LEU LEU A . n A 1 133 HIS 133 531 531 HIS HIS A . n A 1 134 ALA 134 532 532 ALA ALA A . n A 1 135 GLN 135 533 533 GLN GLN A . n A 1 136 GLY 136 534 534 GLY GLY A . n A 1 137 VAL 137 535 535 VAL VAL A . n A 1 138 VAL 138 536 536 VAL VAL A . n A 1 139 HIS 139 537 537 HIS HIS A . n A 1 140 ARG 140 538 538 ARG ARG A . n A 1 141 ASP 141 539 539 ASP ASP A . n A 1 142 LEU 142 540 540 LEU LEU A . n A 1 143 LYS 143 541 541 LYS LYS A . n A 1 144 PRO 144 542 542 PRO PRO A . n A 1 145 SER 145 543 543 SER SER A . n A 1 146 ASN 146 544 544 ASN ASN A . n A 1 147 ILE 147 545 545 ILE ILE A . n A 1 148 LEU 148 546 546 LEU LEU A . n A 1 149 TYR 149 547 547 TYR TYR A . n A 1 150 VAL 150 548 548 VAL VAL A . n A 1 151 ASP 151 549 549 ASP ASP A . n A 1 152 GLU 152 550 550 GLU GLU A . n A 1 153 SER 153 551 551 SER SER A . n A 1 154 GLY 154 552 552 GLY GLY A . n A 1 155 ASN 155 553 553 ASN ASN A . n A 1 156 PRO 156 554 554 PRO PRO A . n A 1 157 GLU 157 555 555 GLU GLU A . n A 1 158 SER 158 556 556 SER SER A . n A 1 159 ILE 159 557 557 ILE ILE A . n A 1 160 ARG 160 558 558 ARG ARG A . n A 1 161 ILE 161 559 559 ILE ILE A . n A 1 162 CYS 162 560 560 CYS CYS A . n A 1 163 ASP 163 561 561 ASP ASP A . n A 1 164 PHE 164 562 562 PHE PHE A . n A 1 165 GLY 165 563 563 GLY GLY A . n A 1 166 PHE 166 564 564 PHE PHE A . n A 1 167 ALA 167 565 565 ALA ALA A . n A 1 168 LYS 168 566 566 LYS LYS A . n A 1 169 GLN 169 567 567 GLN GLN A . n A 1 170 LEU 170 568 568 LEU LEU A . n A 1 171 ARG 171 569 569 ARG ARG A . n A 1 172 ALA 172 570 570 ALA ALA A . n A 1 173 GLU 173 571 571 GLU GLU A . n A 1 174 ASN 174 572 572 ASN ASN A . n A 1 175 GLY 175 573 573 GLY GLY A . n A 1 176 LEU 176 574 574 LEU LEU A . n A 1 177 LEU 177 575 575 LEU LEU A . n A 1 178 MET 178 576 576 MET MET A . n A 1 179 THR 179 577 577 THR THR A . n A 1 180 PRO 180 578 578 PRO PRO A . n A 1 181 CYS 181 579 579 CYS CYS A . n A 1 182 TYR 182 580 580 TYR TYR A . n A 1 183 THR 183 581 581 THR THR A . n A 1 184 ALA 184 582 582 ALA ALA A . n A 1 185 ASN 185 583 583 ASN ASN A . n A 1 186 PHE 186 584 584 PHE PHE A . n A 1 187 VAL 187 585 585 VAL VAL A . n A 1 188 ALA 188 586 586 ALA ALA A . n A 1 189 PRO 189 587 587 PRO PRO A . n A 1 190 GLU 190 588 588 GLU GLU A . n A 1 191 VAL 191 589 589 VAL VAL A . n A 1 192 LEU 192 590 590 LEU LEU A . n A 1 193 GLU 193 591 591 GLU GLU A . n A 1 194 ARG 194 592 592 ARG ARG A . n A 1 195 GLN 195 593 593 GLN GLN A . n A 1 196 GLY 196 594 594 GLY GLY A . n A 1 197 TYR 197 595 595 TYR TYR A . n A 1 198 ASP 198 596 596 ASP ASP A . n A 1 199 ALA 199 597 597 ALA ALA A . n A 1 200 ALA 200 598 598 ALA ALA A . n A 1 201 CYS 201 599 599 CYS CYS A . n A 1 202 ASP 202 600 600 ASP ASP A . n A 1 203 ILE 203 601 601 ILE ILE A . n A 1 204 TRP 204 602 602 TRP TRP A . n A 1 205 SER 205 603 603 SER SER A . n A 1 206 LEU 206 604 604 LEU LEU A . n A 1 207 GLY 207 605 605 GLY GLY A . n A 1 208 VAL 208 606 606 VAL VAL A . n A 1 209 LEU 209 607 607 LEU LEU A . n A 1 210 LEU 210 608 608 LEU LEU A . n A 1 211 TYR 211 609 609 TYR TYR A . n A 1 212 THR 212 610 610 THR THR A . n A 1 213 MET 213 611 611 MET MET A . n A 1 214 LEU 214 612 612 LEU LEU A . n A 1 215 THR 215 613 613 THR THR A . n A 1 216 GLY 216 614 614 GLY GLY A . n A 1 217 TYR 217 615 615 TYR TYR A . n A 1 218 THR 218 616 616 THR THR A . n A 1 219 PRO 219 617 617 PRO PRO A . n A 1 220 PHE 220 618 618 PHE PHE A . n A 1 221 ALA 221 619 619 ALA ALA A . n A 1 222 ASN 222 620 620 ASN ASN A . n A 1 223 GLY 223 621 621 GLY GLY A . n A 1 224 PRO 224 622 622 PRO PRO A . n A 1 225 ASP 225 623 623 ASP ASP A . n A 1 226 ASP 226 624 624 ASP ASP A . n A 1 227 THR 227 625 625 THR THR A . n A 1 228 PRO 228 626 626 PRO PRO A . n A 1 229 GLU 229 627 627 GLU GLU A . n A 1 230 GLU 230 628 628 GLU GLU A . n A 1 231 ILE 231 629 629 ILE ILE A . n A 1 232 LEU 232 630 630 LEU LEU A . n A 1 233 ALA 233 631 631 ALA ALA A . n A 1 234 ARG 234 632 632 ARG ARG A . n A 1 235 ILE 235 633 633 ILE ILE A . n A 1 236 GLY 236 634 634 GLY GLY A . n A 1 237 SER 237 635 635 SER SER A . n A 1 238 GLY 238 636 636 GLY GLY A . n A 1 239 LYS 239 637 637 LYS LYS A . n A 1 240 PHE 240 638 638 PHE PHE A . n A 1 241 SER 241 639 639 SER SER A . n A 1 242 LEU 242 640 640 LEU LEU A . n A 1 243 SER 243 641 641 SER SER A . n A 1 244 GLY 244 642 642 GLY GLY A . n A 1 245 GLY 245 643 643 GLY GLY A . n A 1 246 TYR 246 644 644 TYR TYR A . n A 1 247 TRP 247 645 645 TRP TRP A . n A 1 248 ASN 248 646 646 ASN ASN A . n A 1 249 SER 249 647 647 SER SER A . n A 1 250 VAL 250 648 648 VAL VAL A . n A 1 251 SER 251 649 649 SER SER A . n A 1 252 ASP 252 650 650 ASP ASP A . n A 1 253 THR 253 651 651 THR THR A . n A 1 254 ALA 254 652 652 ALA ALA A . n A 1 255 LYS 255 653 653 LYS LYS A . n A 1 256 ASP 256 654 654 ASP ASP A . n A 1 257 LEU 257 655 655 LEU LEU A . n A 1 258 VAL 258 656 656 VAL VAL A . n A 1 259 SER 259 657 657 SER SER A . n A 1 260 LYS 260 658 658 LYS LYS A . n A 1 261 MET 261 659 659 MET MET A . n A 1 262 LEU 262 660 660 LEU LEU A . n A 1 263 HIS 263 661 661 HIS HIS A . n A 1 264 VAL 264 662 662 VAL VAL A . n A 1 265 ASP 265 663 663 ASP ASP A . n A 1 266 PRO 266 664 664 PRO PRO A . n A 1 267 HIS 267 665 665 HIS HIS A . n A 1 268 GLN 268 666 666 GLN GLN A . n A 1 269 ARG 269 667 667 ARG ARG A . n A 1 270 LEU 270 668 668 LEU LEU A . n A 1 271 THR 271 669 669 THR THR A . n A 1 272 ALA 272 670 670 ALA ALA A . n A 1 273 ALA 273 671 671 ALA ALA A . n A 1 274 LEU 274 672 672 LEU LEU A . n A 1 275 VAL 275 673 673 VAL VAL A . n A 1 276 LEU 276 674 674 LEU LEU A . n A 1 277 ARG 277 675 675 ARG ARG A . n A 1 278 HIS 278 676 676 HIS HIS A . n A 1 279 PRO 279 677 677 PRO PRO A . n A 1 280 TRP 280 678 678 TRP TRP A . n A 1 281 ILE 281 679 679 ILE ILE A . n A 1 282 VAL 282 680 680 VAL VAL A . n A 1 283 HIS 283 681 681 HIS HIS A . n A 1 284 TRP 284 682 682 TRP TRP A . n A 1 285 ASP 285 683 683 ASP ASP A . n A 1 286 GLN 286 684 684 GLN GLN A . n A 1 287 LEU 287 685 685 LEU LEU A . n A 1 288 PRO 288 686 686 PRO PRO A . n A 1 289 GLN 289 687 687 GLN GLN A . n A 1 290 TYR 290 688 688 TYR TYR A . n A 1 291 GLN 291 689 689 GLN GLN A . n A 1 292 LEU 292 690 690 LEU LEU A . n A 1 293 ASN 293 691 691 ASN ASN A . n A 1 294 ARG 294 692 692 ARG ARG A . n A 1 295 GLN 295 693 693 GLN GLN A . n A 1 296 ASP 296 694 694 ASP ASP A . n A 1 297 ALA 297 695 695 ALA ALA A . n A 1 298 PRO 298 696 696 PRO PRO A . n A 1 299 HIS 299 697 697 HIS HIS A . n A 1 300 LEU 300 698 698 LEU LEU A . n A 1 301 VAL 301 699 699 VAL VAL A . n A 1 302 LYS 302 700 700 LYS LYS A . n A 1 303 GLY 303 701 701 GLY GLY A . n A 1 304 ALA 304 702 702 ALA ALA A . n A 1 305 MET 305 703 703 MET MET A . n A 1 306 ALA 306 704 704 ALA ALA A . n A 1 307 ALA 307 705 705 ALA ALA A . n A 1 308 THR 308 706 706 THR THR A . n A 1 309 TYR 309 707 707 TYR TYR A . n A 1 310 SER 310 708 708 SER SER A . n A 1 311 ALA 311 709 709 ALA ALA A . n A 1 312 LEU 312 710 710 LEU LEU A . n A 1 313 ASN 313 711 711 ASN ASN A . n A 1 314 ARG 314 712 712 ARG ARG A . n A 1 315 ASN 315 713 713 ASN ASN A . n A 1 316 GLN 316 714 ? ? ? A . n A 1 317 SER 317 715 ? ? ? A . n A 1 318 PRO 318 716 ? ? ? A . n A 1 319 VAL 319 717 ? ? ? A . n A 1 320 LEU 320 718 ? ? ? A . n A 1 321 GLU 321 719 ? ? ? A . n A 1 322 PRO 322 720 ? ? ? A . n A 1 323 VAL 323 721 ? ? ? A . n A 1 324 GLY 324 722 ? ? ? A . n A 1 325 ARG 325 723 ? ? ? A . n A 1 326 SER 326 724 ? ? ? A . n A 1 327 THR 327 725 ? ? ? A . n A 1 328 LEU 328 726 ? ? ? A . n A 1 329 ALA 329 727 ? ? ? A . n A 1 330 GLN 330 728 ? ? ? A . n A 1 331 ARG 331 729 ? ? ? A . n A 1 332 ARG 332 730 ? ? ? A . n A 1 333 GLY 333 731 ? ? ? A . n A 1 334 ILE 334 732 ? ? ? A . n A 1 335 LYS 335 733 ? ? ? A . n A 1 336 LYS 336 734 ? ? ? A . n A 1 337 ILE 337 735 ? ? ? A . n A 1 338 THR 338 736 ? ? ? A . n A 1 339 SER 339 737 ? ? ? A . n A 1 340 THR 340 738 ? ? ? A . n A 1 341 ALA 341 739 ? ? ? A . n A 1 342 LEU 342 740 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 0JG 1 900 900 0JG 0JG A . C 3 NA 1 901 901 NA NA A . D 4 HOH 1 1001 1 HOH HOH A . D 4 HOH 2 1002 2 HOH HOH A . D 4 HOH 3 1003 3 HOH HOH A . D 4 HOH 4 1004 4 HOH HOH A . D 4 HOH 5 1005 5 HOH HOH A . D 4 HOH 6 1006 6 HOH HOH A . D 4 HOH 7 1007 7 HOH HOH A . D 4 HOH 8 1008 8 HOH HOH A . D 4 HOH 9 1009 9 HOH HOH A . D 4 HOH 10 1010 10 HOH HOH A . D 4 HOH 11 1011 11 HOH HOH A . D 4 HOH 12 1012 12 HOH HOH A . D 4 HOH 13 1013 13 HOH HOH A . D 4 HOH 14 1014 14 HOH HOH A . D 4 HOH 15 1015 15 HOH HOH A . D 4 HOH 16 1016 16 HOH HOH A . D 4 HOH 17 1017 17 HOH HOH A . D 4 HOH 18 1018 18 HOH HOH A . D 4 HOH 19 1019 19 HOH HOH A . D 4 HOH 20 1020 20 HOH HOH A . D 4 HOH 21 1021 21 HOH HOH A . D 4 HOH 22 1022 22 HOH HOH A . D 4 HOH 23 1023 23 HOH HOH A . D 4 HOH 24 1024 24 HOH HOH A . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A SER 415 ? OG ? A SER 17 OG 2 1 Y 1 A LYS 487 ? CG ? A LYS 89 CG 3 1 Y 1 A LYS 487 ? CD ? A LYS 89 CD 4 1 Y 1 A LYS 487 ? CE ? A LYS 89 CE 5 1 Y 1 A LYS 487 ? NZ ? A LYS 89 NZ # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 XSCALE . ? package 'Wolfgang Kabsch' ? 'data scaling' http://www.mpimf-heidelberg.mpg.de/~kabsch/xds/html_doc/xscale_program.html ? ? 2 PHENIX dev_613 ? package 'Paul D. Adams' PDAdams@lbl.gov refinement http://www.phenix-online.org/ C++ ? 3 PDB_EXTRACT 3.10 'June 10, 2010' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 4 Blu-Ice . ? ? ? ? 'data collection' ? ? ? 5 XDS . ? ? ? ? 'data reduction' ? ? ? 6 PHENIX . ? ? ? ? phasing ? ? ? # _cell.length_a 46.700 _cell.length_b 46.700 _cell.length_c 294.100 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.entry_id 4D9T _cell.pdbx_unique_axis ? _cell.Z_PDB 8 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'P 41 21 2' _symmetry.entry_id 4D9T _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.Int_Tables_number 92 _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # _exptl.crystals_number 1 _exptl.entry_id 4D9T _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.08 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 40.97 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'hanging drop' _exptl_crystal_grow.pH 8.5 _exptl_crystal_grow.temp 298 _exptl_crystal_grow.pdbx_details '100mM Tris, pH 8.5, 25% PEG 3350, hanging drop, temperature 298K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315r' _diffrn_detector.pdbx_collection_date 2008-07-15 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator 'Double flat crystal, Si(111)' _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.0 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ALS BEAMLINE 8.3.1' _diffrn_source.pdbx_wavelength_list 1.0 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site ALS _diffrn_source.pdbx_synchrotron_beamline 8.3.1 # _reflns.entry_id 4D9T _reflns.observed_criterion_sigma_F 2 _reflns.observed_criterion_sigma_I 2 _reflns.d_resolution_high 2.4 _reflns.d_resolution_low 36.6 _reflns.number_all 13794 _reflns.number_obs 13507 _reflns.percent_possible_obs 98 _reflns.pdbx_Rmerge_I_obs .108 _reflns.pdbx_Rsym_value .118 _reflns.pdbx_netI_over_sigmaI 18.4 _reflns.B_iso_Wilson_estimate 62.4 _reflns.pdbx_redundancy 16 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.4 _reflns_shell.d_res_low ? _reflns_shell.percent_possible_obs ? _reflns_shell.percent_possible_all 98 _reflns_shell.Rmerge_I_obs ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_redundancy ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 4D9T _refine.ls_d_res_high 2.4000 _refine.ls_d_res_low 36.5740 _refine.pdbx_ls_sigma_F 1.990 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 97.9500 _refine.ls_number_reflns_obs 13506 _refine.ls_number_reflns_all 13794 _refine.pdbx_ls_cross_valid_method ? _refine.pdbx_R_Free_selection_details '10% Random' _refine.details ? _refine.ls_R_factor_all 0.2210 _refine.ls_R_factor_obs 0.2210 _refine.ls_R_factor_R_work 0.2157 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.2665 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 10.0000 _refine.ls_number_reflns_R_free 1350 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 68.6751 _refine.solvent_model_param_bsol 52.1840 _refine.solvent_model_param_ksol 0.3270 _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] 6.3476 _refine.aniso_B[2][2] 6.3476 _refine.aniso_B[3][3] -12.6953 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] -0.0000 _refine.aniso_B[2][3] 0.0000 _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.3500 _refine.overall_SU_B ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.pdbx_solvent_vdw_probe_radii 1.0000 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.7200 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set 0.7921 _refine.B_iso_max 257.050 _refine.B_iso_min 29.670 _refine.pdbx_overall_phase_error 26.2800 _refine.occupancy_max 1.000 _refine.occupancy_min 1.000 _refine.pdbx_ls_sigma_I 2 _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2369 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 30 _refine_hist.number_atoms_solvent 24 _refine_hist.number_atoms_total 2423 _refine_hist.d_res_high 2.4000 _refine_hist.d_res_low 36.5740 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id f_bond_d 2460 0.010 ? ? ? 'X-RAY DIFFRACTION' f_angle_d 3334 1.263 ? ? ? 'X-RAY DIFFRACTION' f_chiral_restr 367 0.086 ? ? ? 'X-RAY DIFFRACTION' f_plane_restr 426 0.005 ? ? ? 'X-RAY DIFFRACTION' f_dihedral_angle_d 907 16.794 ? ? ? 'X-RAY DIFFRACTION' # loop_ _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.percent_reflns_obs _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_R_work _refine_ls_shell.R_factor_R_free _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.pdbx_refine_id 2.4000 2.4858 10 97.0000 1182 . 0.3309 0.3869 . 131 . 1313 . . 'X-RAY DIFFRACTION' 2.4858 2.5853 10 98.0000 1170 . 0.2961 0.3664 . 130 . 1300 . . 'X-RAY DIFFRACTION' 2.5853 2.7029 10 97.0000 1153 . 0.2736 0.3487 . 128 . 1281 . . 'X-RAY DIFFRACTION' 2.7029 2.8454 10 97.0000 1186 . 0.2500 0.3387 . 131 . 1317 . . 'X-RAY DIFFRACTION' 2.8454 3.0236 10 98.0000 1186 . 0.2422 0.2791 . 132 . 1318 . . 'X-RAY DIFFRACTION' 3.0236 3.2569 10 98.0000 1201 . 0.2322 0.2786 . 133 . 1334 . . 'X-RAY DIFFRACTION' 3.2569 3.5844 10 98.0000 1225 . 0.2068 0.2899 . 137 . 1362 . . 'X-RAY DIFFRACTION' 3.5844 4.1025 10 98.0000 1216 . 0.1938 0.2125 . 134 . 1350 . . 'X-RAY DIFFRACTION' 4.1025 5.1664 10 98.0000 1258 . 0.1728 0.1885 . 140 . 1398 . . 'X-RAY DIFFRACTION' 5.1664 36.5785 10 99.0000 1379 . 0.2168 0.3005 . 154 . 1533 . . 'X-RAY DIFFRACTION' # _struct.entry_id 4D9T _struct.title ;Rsk2 C-terminal Kinase Domain with inhibitor (E)-methyl 3-(4-amino-7-(3-hydroxypropyl)-5-p-tolyl-7H-pyrrolo[2,3-d]pyrimidin-6-yl)-2-cyanoacrylate ; _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4D9T _struct_keywords.text 'kinase, inhibitor, reversible, thiol, phosphorylation, migration, TRANSFERASE-TRANSFERASE INHIBITOR complex' _struct_keywords.pdbx_keywords 'TRANSFERASE/TRANSFERASE INHIBITOR' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code KS6A3_HUMAN _struct_ref.pdbx_db_accession P51812 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MQTVGVHSIVQQLHRNSIQFTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDPTEEIEILLRYGQHPNIIT LKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIR ICDFGFAKQLRAENGLLMTPCYTANFVAPEVLKRQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKF SLSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRHPWIVHWDQLPQYQLNRQDAPHLVKGAMAATYSALNRNQSPVL EPVGRSTLAQRRGIKKITSTAL ; _struct_ref.pdbx_align_begin 399 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4D9T _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 342 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P51812 _struct_ref_seq.db_align_beg 399 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 740 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 399 _struct_ref_seq.pdbx_auth_seq_align_end 740 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 4D9T _struct_ref_seq_dif.mon_id GLU _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 193 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code P51812 _struct_ref_seq_dif.db_mon_id LYS _struct_ref_seq_dif.pdbx_seq_db_seq_num 591 _struct_ref_seq_dif.details conflict _struct_ref_seq_dif.pdbx_auth_seq_num 591 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_defined_assembly ? monomeric 1 2 software_defined_assembly PISA dimeric 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 2 'ABSA (A^2)' 1940 ? 2 MORE -9 ? 2 'SSA (A^2)' 28360 ? # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,B,C,D 2 1,2 A,B,C,D # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 7_465 y-1,x+1,-z 0.0000000000 1.0000000000 0.0000000000 -46.7000000000 1.0000000000 0.0000000000 0.0000000000 46.7000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 PRO A 62 ? GLY A 73 ? PRO A 460 GLY A 471 1 ? 12 HELX_P HELX_P2 2 GLU A 102 ? ARG A 109 ? GLU A 500 ARG A 507 1 ? 8 HELX_P HELX_P3 3 SER A 114 ? GLN A 135 ? SER A 512 GLN A 533 1 ? 22 HELX_P HELX_P4 4 LYS A 143 ? SER A 145 ? LYS A 541 SER A 543 5 ? 3 HELX_P HELX_P5 5 ASN A 155 ? GLU A 157 ? ASN A 553 GLU A 555 5 ? 3 HELX_P HELX_P6 6 ALA A 188 ? GLY A 216 ? ALA A 586 GLY A 614 1 ? 29 HELX_P HELX_P7 7 THR A 227 ? GLY A 238 ? THR A 625 GLY A 636 1 ? 12 HELX_P HELX_P8 8 SER A 251 ? LEU A 262 ? SER A 649 LEU A 660 1 ? 12 HELX_P HELX_P9 9 THR A 271 ? LEU A 276 ? THR A 669 LEU A 674 1 ? 6 HELX_P HELX_P10 10 HIS A 278 ? HIS A 283 ? HIS A 676 HIS A 681 1 ? 6 HELX_P HELX_P11 11 TRP A 284 ? LEU A 287 ? TRP A 682 LEU A 685 5 ? 4 HELX_P HELX_P12 12 ALA A 297 ? ASN A 313 ? ALA A 695 ASN A 711 1 ? 17 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 181 SG ? ? ? 1_555 A CYS 181 SG ? ? A CYS 579 A CYS 579 7_465 ? ? ? ? ? ? ? 2.016 ? ? metalc1 metalc ? ? A GLY 73 O ? ? ? 1_555 C NA . NA ? ? A GLY 471 A NA 901 1_555 ? ? ? ? ? ? ? 2.280 ? ? metalc2 metalc ? ? A HIS 75 O ? ? ? 1_555 C NA . NA ? ? A HIS 473 A NA 901 1_555 ? ? ? ? ? ? ? 2.495 ? ? metalc3 metalc ? ? A ILE 78 O ? ? ? 1_555 C NA . NA ? ? A ILE 476 A NA 901 1_555 ? ? ? ? ? ? ? 2.314 ? ? metalc4 metalc ? ? A THR 80 OG1 ? ? ? 1_555 C NA . NA ? ? A THR 478 A NA 901 1_555 ? ? ? ? ? ? ? 2.471 ? ? metalc5 metalc ? ? C NA . NA ? ? ? 1_555 D HOH . O ? ? A NA 901 A HOH 1007 1_555 ? ? ? ? ? ? ? 2.929 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? metalc ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O ? A GLY 73 ? A GLY 471 ? 1_555 NA ? C NA . ? A NA 901 ? 1_555 O ? A HIS 75 ? A HIS 473 ? 1_555 107.3 ? 2 O ? A GLY 73 ? A GLY 471 ? 1_555 NA ? C NA . ? A NA 901 ? 1_555 O ? A ILE 78 ? A ILE 476 ? 1_555 115.3 ? 3 O ? A HIS 75 ? A HIS 473 ? 1_555 NA ? C NA . ? A NA 901 ? 1_555 O ? A ILE 78 ? A ILE 476 ? 1_555 78.0 ? 4 O ? A GLY 73 ? A GLY 471 ? 1_555 NA ? C NA . ? A NA 901 ? 1_555 OG1 ? A THR 80 ? A THR 478 ? 1_555 96.6 ? 5 O ? A HIS 75 ? A HIS 473 ? 1_555 NA ? C NA . ? A NA 901 ? 1_555 OG1 ? A THR 80 ? A THR 478 ? 1_555 154.9 ? 6 O ? A ILE 78 ? A ILE 476 ? 1_555 NA ? C NA . ? A NA 901 ? 1_555 OG1 ? A THR 80 ? A THR 478 ? 1_555 98.7 ? 7 O ? A GLY 73 ? A GLY 471 ? 1_555 NA ? C NA . ? A NA 901 ? 1_555 O ? D HOH . ? A HOH 1007 ? 1_555 161.3 ? 8 O ? A HIS 75 ? A HIS 473 ? 1_555 NA ? C NA . ? A NA 901 ? 1_555 O ? D HOH . ? A HOH 1007 ? 1_555 84.9 ? 9 O ? A ILE 78 ? A ILE 476 ? 1_555 NA ? C NA . ? A NA 901 ? 1_555 O ? D HOH . ? A HOH 1007 ? 1_555 80.5 ? 10 OG1 ? A THR 80 ? A THR 478 ? 1_555 NA ? C NA . ? A NA 901 ? 1_555 O ? D HOH . ? A HOH 1007 ? 1_555 70.0 ? # _pdbx_modification_feature.ordinal 1 _pdbx_modification_feature.label_comp_id CYS _pdbx_modification_feature.label_asym_id A _pdbx_modification_feature.label_seq_id 181 _pdbx_modification_feature.label_alt_id ? _pdbx_modification_feature.modified_residue_label_comp_id CYS _pdbx_modification_feature.modified_residue_label_asym_id A _pdbx_modification_feature.modified_residue_label_seq_id 181 _pdbx_modification_feature.modified_residue_label_alt_id ? _pdbx_modification_feature.auth_comp_id CYS _pdbx_modification_feature.auth_asym_id A _pdbx_modification_feature.auth_seq_id 579 _pdbx_modification_feature.PDB_ins_code ? _pdbx_modification_feature.symmetry 1_555 _pdbx_modification_feature.modified_residue_auth_comp_id CYS _pdbx_modification_feature.modified_residue_auth_asym_id A _pdbx_modification_feature.modified_residue_auth_seq_id 579 _pdbx_modification_feature.modified_residue_PDB_ins_code ? _pdbx_modification_feature.modified_residue_symmetry 7_465 _pdbx_modification_feature.comp_id_linking_atom SG _pdbx_modification_feature.modified_residue_id_linking_atom SG _pdbx_modification_feature.modified_residue_id . _pdbx_modification_feature.ref_pcm_id . _pdbx_modification_feature.ref_comp_id . _pdbx_modification_feature.type None _pdbx_modification_feature.category 'Disulfide bridge' # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 5 ? B ? 2 ? C ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel B 1 2 ? anti-parallel C 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 TYR A 24 ? VAL A 32 ? TYR A 422 VAL A 430 A 2 SER A 36 ? HIS A 43 ? SER A 434 HIS A 441 A 3 MET A 48 ? ASP A 56 ? MET A 446 ASP A 454 A 4 TYR A 90 ? GLU A 96 ? TYR A 488 GLU A 494 A 5 LEU A 81 ? ASP A 86 ? LEU A 479 ASP A 484 B 1 VAL A 137 ? VAL A 138 ? VAL A 535 VAL A 536 B 2 LYS A 168 ? GLN A 169 ? LYS A 566 GLN A 567 C 1 ILE A 147 ? TYR A 149 ? ILE A 545 TYR A 547 C 2 ILE A 159 ? ILE A 161 ? ILE A 557 ILE A 559 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ILE A 30 ? N ILE A 428 O CYS A 38 ? O CYS A 436 A 2 3 N CYS A 41 ? N CYS A 439 O PHE A 50 ? O PHE A 448 A 3 4 N LYS A 53 ? N LYS A 451 O VAL A 93 ? O VAL A 491 A 4 5 O VAL A 94 ? O VAL A 492 N LYS A 82 ? N LYS A 480 B 1 2 N VAL A 138 ? N VAL A 536 O LYS A 168 ? O LYS A 566 C 1 2 N LEU A 148 ? N LEU A 546 O ARG A 160 ? O ARG A 558 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A 0JG 900 ? 11 'BINDING SITE FOR RESIDUE 0JG A 900' AC2 Software A NA 901 ? 5 'BINDING SITE FOR RESIDUE NA A 901' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 11 ILE A 30 ? ILE A 428 . ? 1_555 ? 2 AC1 11 SER A 36 ? SER A 434 . ? 1_555 ? 3 AC1 11 CYS A 38 ? CYS A 436 . ? 1_555 ? 4 AC1 11 ALA A 51 ? ALA A 449 . ? 1_555 ? 5 AC1 11 LYS A 53 ? LYS A 451 . ? 1_555 ? 6 AC1 11 VAL A 93 ? VAL A 491 . ? 1_555 ? 7 AC1 11 THR A 95 ? THR A 493 . ? 1_555 ? 8 AC1 11 GLU A 96 ? GLU A 494 . ? 1_555 ? 9 AC1 11 MET A 98 ? MET A 496 . ? 1_555 ? 10 AC1 11 CYS A 162 ? CYS A 560 . ? 1_555 ? 11 AC1 11 ASP A 163 ? ASP A 561 . ? 1_555 ? 12 AC2 5 GLY A 73 ? GLY A 471 . ? 1_555 ? 13 AC2 5 HIS A 75 ? HIS A 473 . ? 1_555 ? 14 AC2 5 ILE A 78 ? ILE A 476 . ? 1_555 ? 15 AC2 5 THR A 80 ? THR A 478 . ? 1_555 ? 16 AC2 5 HOH D . ? HOH A 1007 . ? 1_555 ? # _pdbx_entry_details.entry_id 4D9T _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification Y # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A HOH 1020 ? ? O A HOH 1022 ? ? 2.06 2 1 O A GLN 533 ? ? NE2 A GLN 567 ? ? 2.11 3 1 O A ALA 565 ? ? O A HOH 1016 ? ? 2.18 # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 CB _pdbx_validate_symm_contact.auth_asym_id_1 A _pdbx_validate_symm_contact.auth_comp_id_1 CYS _pdbx_validate_symm_contact.auth_seq_id_1 579 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 SG _pdbx_validate_symm_contact.auth_asym_id_2 A _pdbx_validate_symm_contact.auth_comp_id_2 CYS _pdbx_validate_symm_contact.auth_seq_id_2 579 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 7_465 _pdbx_validate_symm_contact.dist 1.75 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ILE A 416 ? ? -125.30 -65.46 2 1 GLN A 417 ? ? -172.64 147.43 3 1 LYS A 425 ? ? -104.41 -132.11 4 1 VAL A 482 ? ? -172.29 146.85 5 1 ARG A 507 ? ? -78.19 28.84 6 1 ARG A 538 ? ? 81.48 -16.03 7 1 GLU A 588 ? ? -55.96 -5.76 8 1 HIS A 681 ? ? -94.85 38.57 9 1 TRP A 682 ? ? -39.72 -36.06 10 1 ALA A 695 ? ? -152.04 59.46 11 1 ARG A 712 ? ? -70.20 32.02 # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] 'X-RAY DIFFRACTION' 1 ? refined -27.4863 17.0594 -15.2539 0.5147 0.4861 0.3215 0.2261 -0.0158 0.0170 1.2449 1.6096 1.8805 0.3446 -0.9578 0.5192 -0.1905 0.1312 -0.0600 -0.4098 -0.1000 0.0641 0.3406 0.4982 0.3212 'X-RAY DIFFRACTION' 2 ? refined -12.1278 26.5255 -28.5027 0.3025 0.6269 0.3601 -0.0013 -0.0171 -0.0653 1.1080 2.5661 2.3975 -0.8653 -0.2553 0.7852 -0.1146 0.4632 -0.1452 -0.1769 0.0877 -0.1390 -0.3004 -0.3982 0.6415 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection_details _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection 'X-RAY DIFFRACTION' 1 1 A 415 A 594 ;chain 'A' and (resseq 415:594) ; ? ? ? ? ? 'X-RAY DIFFRACTION' 2 2 A 595 A 713 ;chain 'A' and (resseq 595:713) ; ? ? ? ? ? # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 399 ? A MET 1 2 1 Y 1 A GLN 400 ? A GLN 2 3 1 Y 1 A THR 401 ? A THR 3 4 1 Y 1 A VAL 402 ? A VAL 4 5 1 Y 1 A GLY 403 ? A GLY 5 6 1 Y 1 A VAL 404 ? A VAL 6 7 1 Y 1 A HIS 405 ? A HIS 7 8 1 Y 1 A SER 406 ? A SER 8 9 1 Y 1 A ILE 407 ? A ILE 9 10 1 Y 1 A VAL 408 ? A VAL 10 11 1 Y 1 A GLN 409 ? A GLN 11 12 1 Y 1 A GLN 410 ? A GLN 12 13 1 Y 1 A LEU 411 ? A LEU 13 14 1 Y 1 A HIS 412 ? A HIS 14 15 1 Y 1 A ARG 413 ? A ARG 15 16 1 Y 1 A ASN 414 ? A ASN 16 17 1 Y 1 A GLN 714 ? A GLN 316 18 1 Y 1 A SER 715 ? A SER 317 19 1 Y 1 A PRO 716 ? A PRO 318 20 1 Y 1 A VAL 717 ? A VAL 319 21 1 Y 1 A LEU 718 ? A LEU 320 22 1 Y 1 A GLU 719 ? A GLU 321 23 1 Y 1 A PRO 720 ? A PRO 322 24 1 Y 1 A VAL 721 ? A VAL 323 25 1 Y 1 A GLY 722 ? A GLY 324 26 1 Y 1 A ARG 723 ? A ARG 325 27 1 Y 1 A SER 724 ? A SER 326 28 1 Y 1 A THR 725 ? A THR 327 29 1 Y 1 A LEU 726 ? A LEU 328 30 1 Y 1 A ALA 727 ? A ALA 329 31 1 Y 1 A GLN 728 ? A GLN 330 32 1 Y 1 A ARG 729 ? A ARG 331 33 1 Y 1 A ARG 730 ? A ARG 332 34 1 Y 1 A GLY 731 ? A GLY 333 35 1 Y 1 A ILE 732 ? A ILE 334 36 1 Y 1 A LYS 733 ? A LYS 335 37 1 Y 1 A LYS 734 ? A LYS 336 38 1 Y 1 A ILE 735 ? A ILE 337 39 1 Y 1 A THR 736 ? A THR 338 40 1 Y 1 A SER 737 ? A SER 339 41 1 Y 1 A THR 738 ? A THR 340 42 1 Y 1 A ALA 739 ? A ALA 341 43 1 Y 1 A LEU 740 ? A LEU 342 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 0JG N01 N N N 1 0JG C02 C Y N 2 0JG C03 C Y N 3 0JG C04 C Y N 4 0JG N05 N Y N 5 0JG C06 C N N 6 0JG C07 C N N 7 0JG C08 C N N 8 0JG O09 O N N 9 0JG C10 C Y N 10 0JG C11 C N N 11 0JG C12 C N S 12 0JG C13 C N N 13 0JG O14 O N N 14 0JG C15 C N N 15 0JG O16 O N N 16 0JG C17 C N N 17 0JG N18 N N N 18 0JG C19 C Y N 19 0JG C20 C Y N 20 0JG C21 C Y N 21 0JG C22 C Y N 22 0JG C23 C Y N 23 0JG C24 C N N 24 0JG C25 C Y N 25 0JG C26 C Y N 26 0JG N27 N Y N 27 0JG C28 C Y N 28 0JG N29 N Y N 29 0JG H1 H N N 30 0JG H2 H N N 31 0JG H3 H N N 32 0JG H4 H N N 33 0JG H5 H N N 34 0JG H6 H N N 35 0JG H7 H N N 36 0JG H8 H N N 37 0JG H9 H N N 38 0JG H10 H N N 39 0JG H11 H N N 40 0JG H12 H N N 41 0JG H13 H N N 42 0JG H14 H N N 43 0JG H15 H N N 44 0JG H16 H N N 45 0JG H17 H N N 46 0JG H18 H N N 47 0JG H19 H N N 48 0JG H20 H N N 49 0JG H21 H N N 50 ALA N N N N 51 ALA CA C N S 52 ALA C C N N 53 ALA O O N N 54 ALA CB C N N 55 ALA OXT O N N 56 ALA H H N N 57 ALA H2 H N N 58 ALA HA H N N 59 ALA HB1 H N N 60 ALA HB2 H N N 61 ALA HB3 H N N 62 ALA HXT H N N 63 ARG N N N N 64 ARG CA C N S 65 ARG C C N N 66 ARG O O N N 67 ARG CB C N N 68 ARG CG C N N 69 ARG CD C N N 70 ARG NE N N N 71 ARG CZ C N N 72 ARG NH1 N N N 73 ARG NH2 N N N 74 ARG OXT O N N 75 ARG H H N N 76 ARG H2 H N N 77 ARG HA H N N 78 ARG HB2 H N N 79 ARG HB3 H N N 80 ARG HG2 H N N 81 ARG HG3 H N N 82 ARG HD2 H N N 83 ARG HD3 H N N 84 ARG HE H N N 85 ARG HH11 H N N 86 ARG HH12 H N N 87 ARG HH21 H N N 88 ARG HH22 H N N 89 ARG HXT H N N 90 ASN N N N N 91 ASN CA C N S 92 ASN C C N N 93 ASN O O N N 94 ASN CB C N N 95 ASN CG C N N 96 ASN OD1 O N N 97 ASN ND2 N N N 98 ASN OXT O N N 99 ASN H H N N 100 ASN H2 H N N 101 ASN HA H N N 102 ASN HB2 H N N 103 ASN HB3 H N N 104 ASN HD21 H N N 105 ASN HD22 H N N 106 ASN HXT H N N 107 ASP N N N N 108 ASP CA C N S 109 ASP C C N N 110 ASP O O N N 111 ASP CB C N N 112 ASP CG C N N 113 ASP OD1 O N N 114 ASP OD2 O N N 115 ASP OXT O N N 116 ASP H H N N 117 ASP H2 H N N 118 ASP HA H N N 119 ASP HB2 H N N 120 ASP HB3 H N N 121 ASP HD2 H N N 122 ASP HXT H N N 123 CYS N N N N 124 CYS CA C N R 125 CYS C C N N 126 CYS O O N N 127 CYS CB C N N 128 CYS SG S N N 129 CYS OXT O N N 130 CYS H H N N 131 CYS H2 H N N 132 CYS HA H N N 133 CYS HB2 H N N 134 CYS HB3 H N N 135 CYS HG H N N 136 CYS HXT H N N 137 GLN N N N N 138 GLN CA C N S 139 GLN C C N N 140 GLN O O N N 141 GLN CB C N N 142 GLN CG C N N 143 GLN CD C N N 144 GLN OE1 O N N 145 GLN NE2 N N N 146 GLN OXT O N N 147 GLN H H N N 148 GLN H2 H N N 149 GLN HA H N N 150 GLN HB2 H N N 151 GLN HB3 H N N 152 GLN HG2 H N N 153 GLN HG3 H N N 154 GLN HE21 H N N 155 GLN HE22 H N N 156 GLN HXT H N N 157 GLU N N N N 158 GLU CA C N S 159 GLU C C N N 160 GLU O O N N 161 GLU CB C N N 162 GLU CG C N N 163 GLU CD C N N 164 GLU OE1 O N N 165 GLU OE2 O N N 166 GLU OXT O N N 167 GLU H H N N 168 GLU H2 H N N 169 GLU HA H N N 170 GLU HB2 H N N 171 GLU HB3 H N N 172 GLU HG2 H N N 173 GLU HG3 H N N 174 GLU HE2 H N N 175 GLU HXT H N N 176 GLY N N N N 177 GLY CA C N N 178 GLY C C N N 179 GLY O O N N 180 GLY OXT O N N 181 GLY H H N N 182 GLY H2 H N N 183 GLY HA2 H N N 184 GLY HA3 H N N 185 GLY HXT H N N 186 HIS N N N N 187 HIS CA C N S 188 HIS C C N N 189 HIS O O N N 190 HIS CB C N N 191 HIS CG C Y N 192 HIS ND1 N Y N 193 HIS CD2 C Y N 194 HIS CE1 C Y N 195 HIS NE2 N Y N 196 HIS OXT O N N 197 HIS H H N N 198 HIS H2 H N N 199 HIS HA H N N 200 HIS HB2 H N N 201 HIS HB3 H N N 202 HIS HD1 H N N 203 HIS HD2 H N N 204 HIS HE1 H N N 205 HIS HE2 H N N 206 HIS HXT H N N 207 HOH O O N N 208 HOH H1 H N N 209 HOH H2 H N N 210 ILE N N N N 211 ILE CA C N S 212 ILE C C N N 213 ILE O O N N 214 ILE CB C N S 215 ILE CG1 C N N 216 ILE CG2 C N N 217 ILE CD1 C N N 218 ILE OXT O N N 219 ILE H H N N 220 ILE H2 H N N 221 ILE HA H N N 222 ILE HB H N N 223 ILE HG12 H N N 224 ILE HG13 H N N 225 ILE HG21 H N N 226 ILE HG22 H N N 227 ILE HG23 H N N 228 ILE HD11 H N N 229 ILE HD12 H N N 230 ILE HD13 H N N 231 ILE HXT H N N 232 LEU N N N N 233 LEU CA C N S 234 LEU C C N N 235 LEU O O N N 236 LEU CB C N N 237 LEU CG C N N 238 LEU CD1 C N N 239 LEU CD2 C N N 240 LEU OXT O N N 241 LEU H H N N 242 LEU H2 H N N 243 LEU HA H N N 244 LEU HB2 H N N 245 LEU HB3 H N N 246 LEU HG H N N 247 LEU HD11 H N N 248 LEU HD12 H N N 249 LEU HD13 H N N 250 LEU HD21 H N N 251 LEU HD22 H N N 252 LEU HD23 H N N 253 LEU HXT H N N 254 LYS N N N N 255 LYS CA C N S 256 LYS C C N N 257 LYS O O N N 258 LYS CB C N N 259 LYS CG C N N 260 LYS CD C N N 261 LYS CE C N N 262 LYS NZ N N N 263 LYS OXT O N N 264 LYS H H N N 265 LYS H2 H N N 266 LYS HA H N N 267 LYS HB2 H N N 268 LYS HB3 H N N 269 LYS HG2 H N N 270 LYS HG3 H N N 271 LYS HD2 H N N 272 LYS HD3 H N N 273 LYS HE2 H N N 274 LYS HE3 H N N 275 LYS HZ1 H N N 276 LYS HZ2 H N N 277 LYS HZ3 H N N 278 LYS HXT H N N 279 MET N N N N 280 MET CA C N S 281 MET C C N N 282 MET O O N N 283 MET CB C N N 284 MET CG C N N 285 MET SD S N N 286 MET CE C N N 287 MET OXT O N N 288 MET H H N N 289 MET H2 H N N 290 MET HA H N N 291 MET HB2 H N N 292 MET HB3 H N N 293 MET HG2 H N N 294 MET HG3 H N N 295 MET HE1 H N N 296 MET HE2 H N N 297 MET HE3 H N N 298 MET HXT H N N 299 NA NA NA N N 300 PHE N N N N 301 PHE CA C N S 302 PHE C C N N 303 PHE O O N N 304 PHE CB C N N 305 PHE CG C Y N 306 PHE CD1 C Y N 307 PHE CD2 C Y N 308 PHE CE1 C Y N 309 PHE CE2 C Y N 310 PHE CZ C Y N 311 PHE OXT O N N 312 PHE H H N N 313 PHE H2 H N N 314 PHE HA H N N 315 PHE HB2 H N N 316 PHE HB3 H N N 317 PHE HD1 H N N 318 PHE HD2 H N N 319 PHE HE1 H N N 320 PHE HE2 H N N 321 PHE HZ H N N 322 PHE HXT H N N 323 PRO N N N N 324 PRO CA C N S 325 PRO C C N N 326 PRO O O N N 327 PRO CB C N N 328 PRO CG C N N 329 PRO CD C N N 330 PRO OXT O N N 331 PRO H H N N 332 PRO HA H N N 333 PRO HB2 H N N 334 PRO HB3 H N N 335 PRO HG2 H N N 336 PRO HG3 H N N 337 PRO HD2 H N N 338 PRO HD3 H N N 339 PRO HXT H N N 340 SER N N N N 341 SER CA C N S 342 SER C C N N 343 SER O O N N 344 SER CB C N N 345 SER OG O N N 346 SER OXT O N N 347 SER H H N N 348 SER H2 H N N 349 SER HA H N N 350 SER HB2 H N N 351 SER HB3 H N N 352 SER HG H N N 353 SER HXT H N N 354 THR N N N N 355 THR CA C N S 356 THR C C N N 357 THR O O N N 358 THR CB C N R 359 THR OG1 O N N 360 THR CG2 C N N 361 THR OXT O N N 362 THR H H N N 363 THR H2 H N N 364 THR HA H N N 365 THR HB H N N 366 THR HG1 H N N 367 THR HG21 H N N 368 THR HG22 H N N 369 THR HG23 H N N 370 THR HXT H N N 371 TRP N N N N 372 TRP CA C N S 373 TRP C C N N 374 TRP O O N N 375 TRP CB C N N 376 TRP CG C Y N 377 TRP CD1 C Y N 378 TRP CD2 C Y N 379 TRP NE1 N Y N 380 TRP CE2 C Y N 381 TRP CE3 C Y N 382 TRP CZ2 C Y N 383 TRP CZ3 C Y N 384 TRP CH2 C Y N 385 TRP OXT O N N 386 TRP H H N N 387 TRP H2 H N N 388 TRP HA H N N 389 TRP HB2 H N N 390 TRP HB3 H N N 391 TRP HD1 H N N 392 TRP HE1 H N N 393 TRP HE3 H N N 394 TRP HZ2 H N N 395 TRP HZ3 H N N 396 TRP HH2 H N N 397 TRP HXT H N N 398 TYR N N N N 399 TYR CA C N S 400 TYR C C N N 401 TYR O O N N 402 TYR CB C N N 403 TYR CG C Y N 404 TYR CD1 C Y N 405 TYR CD2 C Y N 406 TYR CE1 C Y N 407 TYR CE2 C Y N 408 TYR CZ C Y N 409 TYR OH O N N 410 TYR OXT O N N 411 TYR H H N N 412 TYR H2 H N N 413 TYR HA H N N 414 TYR HB2 H N N 415 TYR HB3 H N N 416 TYR HD1 H N N 417 TYR HD2 H N N 418 TYR HE1 H N N 419 TYR HE2 H N N 420 TYR HH H N N 421 TYR HXT H N N 422 VAL N N N N 423 VAL CA C N S 424 VAL C C N N 425 VAL O O N N 426 VAL CB C N N 427 VAL CG1 C N N 428 VAL CG2 C N N 429 VAL OXT O N N 430 VAL H H N N 431 VAL H2 H N N 432 VAL HA H N N 433 VAL HB H N N 434 VAL HG11 H N N 435 VAL HG12 H N N 436 VAL HG13 H N N 437 VAL HG21 H N N 438 VAL HG22 H N N 439 VAL HG23 H N N 440 VAL HXT H N N 441 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 0JG O09 C08 sing N N 1 0JG C08 C07 sing N N 2 0JG C07 C06 doub N E 3 0JG C06 N05 sing N N 4 0JG N27 C28 doub Y N 5 0JG N27 C04 sing Y N 6 0JG C28 N29 sing Y N 7 0JG N05 C04 sing Y N 8 0JG N05 C10 sing Y N 9 0JG C04 C03 doub Y N 10 0JG N29 C02 doub Y N 11 0JG C10 C11 sing N N 12 0JG C10 C19 doub Y N 13 0JG C03 C02 sing Y N 14 0JG C03 C19 sing Y N 15 0JG C17 N18 trip N N 16 0JG C17 C12 sing N N 17 0JG C12 C11 sing N N 18 0JG C12 C13 sing N N 19 0JG C02 N01 sing N N 20 0JG O14 C13 sing N N 21 0JG O14 C15 sing N N 22 0JG C19 C20 sing N N 23 0JG C13 O16 doub N N 24 0JG C20 C26 doub Y N 25 0JG C20 C21 sing Y N 26 0JG C26 C25 sing Y N 27 0JG C21 C22 doub Y N 28 0JG C25 C23 doub Y N 29 0JG C22 C23 sing Y N 30 0JG C23 C24 sing N N 31 0JG N01 H1 sing N N 32 0JG N01 H2 sing N N 33 0JG C06 H3 sing N N 34 0JG C07 H4 sing N N 35 0JG C08 H5 sing N N 36 0JG C08 H6 sing N N 37 0JG O09 H7 sing N N 38 0JG C11 H8 sing N N 39 0JG C11 H9 sing N N 40 0JG C12 H10 sing N N 41 0JG C15 H11 sing N N 42 0JG C15 H12 sing N N 43 0JG C15 H13 sing N N 44 0JG C21 H14 sing N N 45 0JG C22 H15 sing N N 46 0JG C24 H16 sing N N 47 0JG C24 H17 sing N N 48 0JG C24 H18 sing N N 49 0JG C25 H19 sing N N 50 0JG C26 H20 sing N N 51 0JG C28 H21 sing N N 52 ALA N CA sing N N 53 ALA N H sing N N 54 ALA N H2 sing N N 55 ALA CA C sing N N 56 ALA CA CB sing N N 57 ALA CA HA sing N N 58 ALA C O doub N N 59 ALA C OXT sing N N 60 ALA CB HB1 sing N N 61 ALA CB HB2 sing N N 62 ALA CB HB3 sing N N 63 ALA OXT HXT sing N N 64 ARG N CA sing N N 65 ARG N H sing N N 66 ARG N H2 sing N N 67 ARG CA C sing N N 68 ARG CA CB sing N N 69 ARG CA HA sing N N 70 ARG C O doub N N 71 ARG C OXT sing N N 72 ARG CB CG sing N N 73 ARG CB HB2 sing N N 74 ARG CB HB3 sing N N 75 ARG CG CD sing N N 76 ARG CG HG2 sing N N 77 ARG CG HG3 sing N N 78 ARG CD NE sing N N 79 ARG CD HD2 sing N N 80 ARG CD HD3 sing N N 81 ARG NE CZ sing N N 82 ARG NE HE sing N N 83 ARG CZ NH1 sing N N 84 ARG CZ NH2 doub N N 85 ARG NH1 HH11 sing N N 86 ARG NH1 HH12 sing N N 87 ARG NH2 HH21 sing N N 88 ARG NH2 HH22 sing N N 89 ARG OXT HXT sing N N 90 ASN N CA sing N N 91 ASN N H sing N N 92 ASN N H2 sing N N 93 ASN CA C sing N N 94 ASN CA CB sing N N 95 ASN CA HA sing N N 96 ASN C O doub N N 97 ASN C OXT sing N N 98 ASN CB CG sing N N 99 ASN CB HB2 sing N N 100 ASN CB HB3 sing N N 101 ASN CG OD1 doub N N 102 ASN CG ND2 sing N N 103 ASN ND2 HD21 sing N N 104 ASN ND2 HD22 sing N N 105 ASN OXT HXT sing N N 106 ASP N CA sing N N 107 ASP N H sing N N 108 ASP N H2 sing N N 109 ASP CA C sing N N 110 ASP CA CB sing N N 111 ASP CA HA sing N N 112 ASP C O doub N N 113 ASP C OXT sing N N 114 ASP CB CG sing N N 115 ASP CB HB2 sing N N 116 ASP CB HB3 sing N N 117 ASP CG OD1 doub N N 118 ASP CG OD2 sing N N 119 ASP OD2 HD2 sing N N 120 ASP OXT HXT sing N N 121 CYS N CA sing N N 122 CYS N H sing N N 123 CYS N H2 sing N N 124 CYS CA C sing N N 125 CYS CA CB sing N N 126 CYS CA HA sing N N 127 CYS C O doub N N 128 CYS C OXT sing N N 129 CYS CB SG sing N N 130 CYS CB HB2 sing N N 131 CYS CB HB3 sing N N 132 CYS SG HG sing N N 133 CYS OXT HXT sing N N 134 GLN N CA sing N N 135 GLN N H sing N N 136 GLN N H2 sing N N 137 GLN CA C sing N N 138 GLN CA CB sing N N 139 GLN CA HA sing N N 140 GLN C O doub N N 141 GLN C OXT sing N N 142 GLN CB CG sing N N 143 GLN CB HB2 sing N N 144 GLN CB HB3 sing N N 145 GLN CG CD sing N N 146 GLN CG HG2 sing N N 147 GLN CG HG3 sing N N 148 GLN CD OE1 doub N N 149 GLN CD NE2 sing N N 150 GLN NE2 HE21 sing N N 151 GLN NE2 HE22 sing N N 152 GLN OXT HXT sing N N 153 GLU N CA sing N N 154 GLU N H sing N N 155 GLU N H2 sing N N 156 GLU CA C sing N N 157 GLU CA CB sing N N 158 GLU CA HA sing N N 159 GLU C O doub N N 160 GLU C OXT sing N N 161 GLU CB CG sing N N 162 GLU CB HB2 sing N N 163 GLU CB HB3 sing N N 164 GLU CG CD sing N N 165 GLU CG HG2 sing N N 166 GLU CG HG3 sing N N 167 GLU CD OE1 doub N N 168 GLU CD OE2 sing N N 169 GLU OE2 HE2 sing N N 170 GLU OXT HXT sing N N 171 GLY N CA sing N N 172 GLY N H sing N N 173 GLY N H2 sing N N 174 GLY CA C sing N N 175 GLY CA HA2 sing N N 176 GLY CA HA3 sing N N 177 GLY C O doub N N 178 GLY C OXT sing N N 179 GLY OXT HXT sing N N 180 HIS N CA sing N N 181 HIS N H sing N N 182 HIS N H2 sing N N 183 HIS CA C sing N N 184 HIS CA CB sing N N 185 HIS CA HA sing N N 186 HIS C O doub N N 187 HIS C OXT sing N N 188 HIS CB CG sing N N 189 HIS CB HB2 sing N N 190 HIS CB HB3 sing N N 191 HIS CG ND1 sing Y N 192 HIS CG CD2 doub Y N 193 HIS ND1 CE1 doub Y N 194 HIS ND1 HD1 sing N N 195 HIS CD2 NE2 sing Y N 196 HIS CD2 HD2 sing N N 197 HIS CE1 NE2 sing Y N 198 HIS CE1 HE1 sing N N 199 HIS NE2 HE2 sing N N 200 HIS OXT HXT sing N N 201 HOH O H1 sing N N 202 HOH O H2 sing N N 203 ILE N CA sing N N 204 ILE N H sing N N 205 ILE N H2 sing N N 206 ILE CA C sing N N 207 ILE CA CB sing N N 208 ILE CA HA sing N N 209 ILE C O doub N N 210 ILE C OXT sing N N 211 ILE CB CG1 sing N N 212 ILE CB CG2 sing N N 213 ILE CB HB sing N N 214 ILE CG1 CD1 sing N N 215 ILE CG1 HG12 sing N N 216 ILE CG1 HG13 sing N N 217 ILE CG2 HG21 sing N N 218 ILE CG2 HG22 sing N N 219 ILE CG2 HG23 sing N N 220 ILE CD1 HD11 sing N N 221 ILE CD1 HD12 sing N N 222 ILE CD1 HD13 sing N N 223 ILE OXT HXT sing N N 224 LEU N CA sing N N 225 LEU N H sing N N 226 LEU N H2 sing N N 227 LEU CA C sing N N 228 LEU CA CB sing N N 229 LEU CA HA sing N N 230 LEU C O doub N N 231 LEU C OXT sing N N 232 LEU CB CG sing N N 233 LEU CB HB2 sing N N 234 LEU CB HB3 sing N N 235 LEU CG CD1 sing N N 236 LEU CG CD2 sing N N 237 LEU CG HG sing N N 238 LEU CD1 HD11 sing N N 239 LEU CD1 HD12 sing N N 240 LEU CD1 HD13 sing N N 241 LEU CD2 HD21 sing N N 242 LEU CD2 HD22 sing N N 243 LEU CD2 HD23 sing N N 244 LEU OXT HXT sing N N 245 LYS N CA sing N N 246 LYS N H sing N N 247 LYS N H2 sing N N 248 LYS CA C sing N N 249 LYS CA CB sing N N 250 LYS CA HA sing N N 251 LYS C O doub N N 252 LYS C OXT sing N N 253 LYS CB CG sing N N 254 LYS CB HB2 sing N N 255 LYS CB HB3 sing N N 256 LYS CG CD sing N N 257 LYS CG HG2 sing N N 258 LYS CG HG3 sing N N 259 LYS CD CE sing N N 260 LYS CD HD2 sing N N 261 LYS CD HD3 sing N N 262 LYS CE NZ sing N N 263 LYS CE HE2 sing N N 264 LYS CE HE3 sing N N 265 LYS NZ HZ1 sing N N 266 LYS NZ HZ2 sing N N 267 LYS NZ HZ3 sing N N 268 LYS OXT HXT sing N N 269 MET N CA sing N N 270 MET N H sing N N 271 MET N H2 sing N N 272 MET CA C sing N N 273 MET CA CB sing N N 274 MET CA HA sing N N 275 MET C O doub N N 276 MET C OXT sing N N 277 MET CB CG sing N N 278 MET CB HB2 sing N N 279 MET CB HB3 sing N N 280 MET CG SD sing N N 281 MET CG HG2 sing N N 282 MET CG HG3 sing N N 283 MET SD CE sing N N 284 MET CE HE1 sing N N 285 MET CE HE2 sing N N 286 MET CE HE3 sing N N 287 MET OXT HXT sing N N 288 PHE N CA sing N N 289 PHE N H sing N N 290 PHE N H2 sing N N 291 PHE CA C sing N N 292 PHE CA CB sing N N 293 PHE CA HA sing N N 294 PHE C O doub N N 295 PHE C OXT sing N N 296 PHE CB CG sing N N 297 PHE CB HB2 sing N N 298 PHE CB HB3 sing N N 299 PHE CG CD1 doub Y N 300 PHE CG CD2 sing Y N 301 PHE CD1 CE1 sing Y N 302 PHE CD1 HD1 sing N N 303 PHE CD2 CE2 doub Y N 304 PHE CD2 HD2 sing N N 305 PHE CE1 CZ doub Y N 306 PHE CE1 HE1 sing N N 307 PHE CE2 CZ sing Y N 308 PHE CE2 HE2 sing N N 309 PHE CZ HZ sing N N 310 PHE OXT HXT sing N N 311 PRO N CA sing N N 312 PRO N CD sing N N 313 PRO N H sing N N 314 PRO CA C sing N N 315 PRO CA CB sing N N 316 PRO CA HA sing N N 317 PRO C O doub N N 318 PRO C OXT sing N N 319 PRO CB CG sing N N 320 PRO CB HB2 sing N N 321 PRO CB HB3 sing N N 322 PRO CG CD sing N N 323 PRO CG HG2 sing N N 324 PRO CG HG3 sing N N 325 PRO CD HD2 sing N N 326 PRO CD HD3 sing N N 327 PRO OXT HXT sing N N 328 SER N CA sing N N 329 SER N H sing N N 330 SER N H2 sing N N 331 SER CA C sing N N 332 SER CA CB sing N N 333 SER CA HA sing N N 334 SER C O doub N N 335 SER C OXT sing N N 336 SER CB OG sing N N 337 SER CB HB2 sing N N 338 SER CB HB3 sing N N 339 SER OG HG sing N N 340 SER OXT HXT sing N N 341 THR N CA sing N N 342 THR N H sing N N 343 THR N H2 sing N N 344 THR CA C sing N N 345 THR CA CB sing N N 346 THR CA HA sing N N 347 THR C O doub N N 348 THR C OXT sing N N 349 THR CB OG1 sing N N 350 THR CB CG2 sing N N 351 THR CB HB sing N N 352 THR OG1 HG1 sing N N 353 THR CG2 HG21 sing N N 354 THR CG2 HG22 sing N N 355 THR CG2 HG23 sing N N 356 THR OXT HXT sing N N 357 TRP N CA sing N N 358 TRP N H sing N N 359 TRP N H2 sing N N 360 TRP CA C sing N N 361 TRP CA CB sing N N 362 TRP CA HA sing N N 363 TRP C O doub N N 364 TRP C OXT sing N N 365 TRP CB CG sing N N 366 TRP CB HB2 sing N N 367 TRP CB HB3 sing N N 368 TRP CG CD1 doub Y N 369 TRP CG CD2 sing Y N 370 TRP CD1 NE1 sing Y N 371 TRP CD1 HD1 sing N N 372 TRP CD2 CE2 doub Y N 373 TRP CD2 CE3 sing Y N 374 TRP NE1 CE2 sing Y N 375 TRP NE1 HE1 sing N N 376 TRP CE2 CZ2 sing Y N 377 TRP CE3 CZ3 doub Y N 378 TRP CE3 HE3 sing N N 379 TRP CZ2 CH2 doub Y N 380 TRP CZ2 HZ2 sing N N 381 TRP CZ3 CH2 sing Y N 382 TRP CZ3 HZ3 sing N N 383 TRP CH2 HH2 sing N N 384 TRP OXT HXT sing N N 385 TYR N CA sing N N 386 TYR N H sing N N 387 TYR N H2 sing N N 388 TYR CA C sing N N 389 TYR CA CB sing N N 390 TYR CA HA sing N N 391 TYR C O doub N N 392 TYR C OXT sing N N 393 TYR CB CG sing N N 394 TYR CB HB2 sing N N 395 TYR CB HB3 sing N N 396 TYR CG CD1 doub Y N 397 TYR CG CD2 sing Y N 398 TYR CD1 CE1 sing Y N 399 TYR CD1 HD1 sing N N 400 TYR CD2 CE2 doub Y N 401 TYR CD2 HD2 sing N N 402 TYR CE1 CZ doub Y N 403 TYR CE1 HE1 sing N N 404 TYR CE2 CZ sing Y N 405 TYR CE2 HE2 sing N N 406 TYR CZ OH sing N N 407 TYR OH HH sing N N 408 TYR OXT HXT sing N N 409 VAL N CA sing N N 410 VAL N H sing N N 411 VAL N H2 sing N N 412 VAL CA C sing N N 413 VAL CA CB sing N N 414 VAL CA HA sing N N 415 VAL C O doub N N 416 VAL C OXT sing N N 417 VAL CB CG1 sing N N 418 VAL CB CG2 sing N N 419 VAL CB HB sing N N 420 VAL CG1 HG11 sing N N 421 VAL CG1 HG12 sing N N 422 VAL CG1 HG13 sing N N 423 VAL CG2 HG21 sing N N 424 VAL CG2 HG22 sing N N 425 VAL CG2 HG23 sing N N 426 VAL OXT HXT sing N N 427 # _atom_sites.entry_id 4D9T _atom_sites.fract_transf_matrix[1][1] 0.021413 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.021413 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.003400 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N NA O S # loop_ # loop_ #