HEADER PROTEIN TRANSPORT 13-JAN-12 4DBB TITLE THE PTB DOMAIN OF MINT1 IS AUTOINHIBITED BY A HELIX IN THE C-TERMINAL TITLE 2 LINKER REGION COMPND MOL_ID: 1; COMPND 2 MOLECULE: AMYLOID BETA A4 PRECURSOR PROTEIN-BINDING FAMILY A MEMBER COMPND 3 1; COMPND 4 CHAIN: A; COMPND 5 FRAGMENT: PTB DOMAIN, UNP RESIDUES 453-643 WITH DELETION OF RESIDUES COMPND 6 497-508; COMPND 7 SYNONYM: ADAPTER PROTEIN X11ALPHA,NEURON-SPECIFIC X11 PROTEIN, COMPND 8 NEURONAL MUNC18-1-INTERACTING PROTEIN 1,MINT-1,ADAPTER PROTEIN COMPND 9 X11ALPHA,NEURON-SPECIFIC X11 PROTEIN,NEURONAL MUNC18-1-INTERACTING COMPND 10 PROTEIN 1,MINT-1; COMPND 11 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: RATTUS NORVEGICUS; SOURCE 3 ORGANISM_COMMON: RAT; SOURCE 4 ORGANISM_TAXID: 10116; SOURCE 5 GENE: APBA1, MINT1, X11; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID KEYWDS X11S/MINTS, PTB DOMAIN, CHIMERA PROTEIN, PROTEIN TRANSPORT EXPDTA X-RAY DIFFRACTION AUTHOR D.R.TOMCHICK,J.RIZO,A.HO,Y.XU REVDAT 4 15-NOV-17 4DBB 1 REMARK REVDAT 3 28-JUN-17 4DBB 1 COMPND REMARK DBREF REVDAT 2 21-MAR-12 4DBB 1 JRNL REVDAT 1 07-MAR-12 4DBB 0 JRNL AUTH M.F.MATOS,Y.XU,I.DULUBOVA,Z.OTWINOWSKI,J.M.RICHARDSON, JRNL AUTH 2 D.R.TOMCHICK,J.RIZO,A.HO JRNL TITL AUTOINHIBITION OF MINT1 ADAPTOR PROTEIN REGULATES AMYLOID JRNL TITL 2 PRECURSOR PROTEIN BINDING AND PROCESSING. JRNL REF PROC.NATL.ACAD.SCI.USA V. 109 3802 2012 JRNL REFN ISSN 0027-8424 JRNL PMID 22355143 JRNL DOI 10.1073/PNAS.1119075109 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.7.1_743 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 33.02 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 92.1 REMARK 3 NUMBER OF REFLECTIONS : 18378 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.198 REMARK 3 R VALUE (WORKING SET) : 0.197 REMARK 3 FREE R VALUE : 0.225 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.080 REMARK 3 FREE R VALUE TEST SET COUNT : 934 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 33.0212 - 3.6352 1.00 2892 157 0.2060 0.2250 REMARK 3 2 3.6352 - 2.8859 1.00 2732 143 0.1890 0.2214 REMARK 3 3 2.8859 - 2.5212 1.00 2713 146 0.1930 0.2239 REMARK 3 4 2.5212 - 2.2908 1.00 2650 147 0.1889 0.2111 REMARK 3 5 2.2908 - 2.1266 0.99 2635 152 0.1840 0.2325 REMARK 3 6 2.1266 - 2.0012 0.93 2471 128 0.1979 0.2502 REMARK 3 7 2.0012 - 1.9010 0.51 1351 61 0.1970 0.2438 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 0.90 REMARK 3 SHRINKAGE RADIUS : 0.77 REMARK 3 K_SOL : 0.39 REMARK 3 B_SOL : 46.60 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.420 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 21.450 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 59.56 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.13060 REMARK 3 B22 (A**2) : 0.13060 REMARK 3 B33 (A**2) : -0.26130 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.017 1241 REMARK 3 ANGLE : 1.443 1665 REMARK 3 CHIRALITY : 0.120 189 REMARK 3 PLANARITY : 0.008 216 REMARK 3 DIHEDRAL : 13.270 476 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 8 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN A AND RESID 455:459) REMARK 3 ORIGIN FOR THE GROUP (A): 8.0326 -11.6134 7.6782 REMARK 3 T TENSOR REMARK 3 T11: 0.7106 T22: 0.6064 REMARK 3 T33: 0.5608 T12: 0.0094 REMARK 3 T13: -0.1892 T23: 0.0519 REMARK 3 L TENSOR REMARK 3 L11: 4.3576 L22: 4.5567 REMARK 3 L33: 2.2993 L12: 3.5905 REMARK 3 L13: 1.1121 L23: 2.6994 REMARK 3 S TENSOR REMARK 3 S11: 0.7804 S12: 1.5005 S13: -0.8766 REMARK 3 S21: -0.2230 S22: 0.2292 S23: 1.5498 REMARK 3 S31: 1.7304 S32: -0.9370 S33: -0.7647 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN A AND RESID 460:480) REMARK 3 ORIGIN FOR THE GROUP (A): 17.4087 13.8422 13.8971 REMARK 3 T TENSOR REMARK 3 T11: 0.3007 T22: 0.1426 REMARK 3 T33: 0.2187 T12: -0.0086 REMARK 3 T13: -0.0652 T23: 0.0231 REMARK 3 L TENSOR REMARK 3 L11: 1.4361 L22: 2.1184 REMARK 3 L33: 1.0388 L12: 0.8194 REMARK 3 L13: -0.1348 L23: -0.4256 REMARK 3 S TENSOR REMARK 3 S11: 0.0307 S12: -0.1711 S13: 0.0277 REMARK 3 S21: 0.2300 S22: -0.1231 S23: 0.0112 REMARK 3 S31: 0.0279 S32: 0.0152 S33: 0.0699 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: (CHAIN A AND RESID 481:516) REMARK 3 ORIGIN FOR THE GROUP (A): 19.6419 20.0578 7.5857 REMARK 3 T TENSOR REMARK 3 T11: 0.2180 T22: 0.1704 REMARK 3 T33: 0.2695 T12: -0.0449 REMARK 3 T13: -0.0281 T23: 0.0338 REMARK 3 L TENSOR REMARK 3 L11: 4.3253 L22: 3.2414 REMARK 3 L33: 3.7779 L12: -1.4601 REMARK 3 L13: -0.4200 L23: 0.4725 REMARK 3 S TENSOR REMARK 3 S11: 0.5073 S12: -0.0532 S13: 0.3584 REMARK 3 S21: -0.0205 S22: -0.2535 S23: -0.6523 REMARK 3 S31: -0.4638 S32: 0.4663 S33: -0.1765 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: (CHAIN A AND RESID 517:537) REMARK 3 ORIGIN FOR THE GROUP (A): 22.0904 0.7749 14.9150 REMARK 3 T TENSOR REMARK 3 T11: 0.5050 T22: 0.1520 REMARK 3 T33: 0.2750 T12: 0.0028 REMARK 3 T13: -0.0052 T23: 0.0688 REMARK 3 L TENSOR REMARK 3 L11: 6.2293 L22: 3.2920 REMARK 3 L33: 3.4408 L12: 0.0649 REMARK 3 L13: 0.4616 L23: 0.0395 REMARK 3 S TENSOR REMARK 3 S11: 0.0694 S12: -0.3204 S13: -0.7710 REMARK 3 S21: 1.2122 S22: -0.1355 S23: -0.4627 REMARK 3 S31: 0.9288 S32: 0.3890 S33: 0.2704 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: (CHAIN A AND RESID 538:563) REMARK 3 ORIGIN FOR THE GROUP (A): 14.9393 10.1505 12.4987 REMARK 3 T TENSOR REMARK 3 T11: 0.3333 T22: 0.1739 REMARK 3 T33: 0.1714 T12: -0.0304 REMARK 3 T13: 0.0147 T23: 0.0013 REMARK 3 L TENSOR REMARK 3 L11: 1.9367 L22: 2.4161 REMARK 3 L33: 2.1496 L12: 0.2713 REMARK 3 L13: 0.0567 L23: 0.7272 REMARK 3 S TENSOR REMARK 3 S11: 0.0255 S12: -0.1561 S13: 0.0806 REMARK 3 S21: 0.5574 S22: -0.1371 S23: 0.1809 REMARK 3 S31: 0.4215 S32: -0.1777 S33: 0.0712 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: (CHAIN A AND RESID 564:598) REMARK 3 ORIGIN FOR THE GROUP (A): 16.0103 14.3422 17.0193 REMARK 3 T TENSOR REMARK 3 T11: 0.4428 T22: 0.2010 REMARK 3 T33: 0.1379 T12: -0.0133 REMARK 3 T13: -0.0282 T23: 0.0191 REMARK 3 L TENSOR REMARK 3 L11: 3.6042 L22: 4.0937 REMARK 3 L33: 3.9447 L12: -0.2233 REMARK 3 L13: 1.4628 L23: -0.3628 REMARK 3 S TENSOR REMARK 3 S11: -0.2163 S12: -0.6061 S13: 0.3137 REMARK 3 S21: 1.2236 S22: 0.2711 S23: -0.2993 REMARK 3 S31: 0.2216 S32: -0.2591 S33: 0.1979 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: (CHAIN A AND RESID 599:620) REMARK 3 ORIGIN FOR THE GROUP (A): 3.9827 3.3908 9.0778 REMARK 3 T TENSOR REMARK 3 T11: 0.4235 T22: 0.6040 REMARK 3 T33: 0.5320 T12: -0.1453 REMARK 3 T13: 0.0529 T23: -0.0768 REMARK 3 L TENSOR REMARK 3 L11: 7.3015 L22: 2.7785 REMARK 3 L33: 3.6165 L12: -0.0761 REMARK 3 L13: -3.6884 L23: -0.8446 REMARK 3 S TENSOR REMARK 3 S11: 0.1743 S12: 0.5935 S13: -0.7325 REMARK 3 S21: 0.2369 S22: -0.3907 S23: 0.9620 REMARK 3 S31: 0.2052 S32: -1.4740 S33: 0.3615 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: (CHAIN A AND RESID 623:640) REMARK 3 ORIGIN FOR THE GROUP (A): -5.4885 11.1646 7.2333 REMARK 3 T TENSOR REMARK 3 T11: 0.6852 T22: 1.2114 REMARK 3 T33: 0.9015 T12: -0.1477 REMARK 3 T13: 0.0748 T23: 0.1122 REMARK 3 L TENSOR REMARK 3 L11: 2.0005 L22: 7.8954 REMARK 3 L33: 3.0927 L12: 1.0977 REMARK 3 L13: 2.2417 L23: 1.4970 REMARK 3 S TENSOR REMARK 3 S11: 0.0036 S12: -0.9390 S13: -0.0385 REMARK 3 S21: 0.3210 S22: 0.2023 S23: 0.2770 REMARK 3 S31: -1.0171 S32: 0.2978 S33: -0.3057 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4DBB COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 26-JAN-12. REMARK 100 THE DEPOSITION ID IS D_1000070115. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-MAY-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : NULL REMARK 200 WAVELENGTH OR RANGE (A) : NULL REMARK 200 MONOCHROMATOR : MIRRORS REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : R-AXIS IV REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO, HKL-3000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK, HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 19927 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : 13.60 REMARK 200 R MERGE (I) : 0.06600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.92 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.9 REMARK 200 DATA REDUNDANCY IN SHELL : 11.50 REMARK 200 R MERGE FOR SHELL (I) : 0.95800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHELXS REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 62.10 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.25 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 25% ISOPROPANOL, 25% GLYCEROL, 0.1 M REMARK 280 HEPES PH 7.5, 0.15 M NACL, 0.2 M AMMONIUM ACETATE, 2 MM TCEP, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 57.57750 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 32.36450 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 32.36450 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 28.78875 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 32.36450 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 32.36450 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 86.36625 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 32.36450 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 32.36450 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 28.78875 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 32.36450 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 32.36450 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 86.36625 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 57.57750 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 802 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASP A 453 REMARK 465 PRO A 454 REMARK 465 PRO A 509 REMARK 465 GLU A 510 REMARK 465 GLY A 511 REMARK 465 GLU A 512 REMARK 465 SER A 513 REMARK 465 ASN A 621 REMARK 465 GLY A 622 REMARK 465 ASP A 641 REMARK 465 MET A 642 REMARK 465 TYR A 643 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HE2 HIS A 542 HE2 HIS A 592 1.21 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 HE21 GLN A 489 H ASN A 555 7555 1.27 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 566 169.12 -48.96 REMARK 500 SER A 568 -0.46 76.61 REMARK 500 ARG A 619 61.41 -107.82 REMARK 500 GLU A 626 2.24 -68.73 REMARK 500 SER A 629 -176.15 -66.09 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 848 DISTANCE = 6.10 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 701 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACY A 702 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACY A 703 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IPA A 704 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IPA A 705 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 706 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 707 REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE CHIMERA PROTEIN IS OF PTB DOMAIN OF MINT-1(UNP RESIDUES 453-643) REMARK 999 WITH TWO DELETIONS OF RESIDUES 499-508 AND 569-585. DBREF 4DBB A 453 496 UNP O35430 APBA1_RAT 453 496 DBREF 4DBB A 509 643 UNP O35430 APBA1_RAT 509 643 SEQADV 4DBB A UNP O35430 ASN 569 DELETION SEQADV 4DBB A UNP O35430 SER 570 DELETION SEQADV 4DBB A UNP O35430 GLN 571 DELETION SEQADV 4DBB A UNP O35430 GLU 572 DELETION SEQADV 4DBB A UNP O35430 ASN 573 DELETION SEQADV 4DBB A UNP O35430 VAL 574 DELETION SEQADV 4DBB A UNP O35430 GLU 575 DELETION SEQADV 4DBB A UNP O35430 ALA 576 DELETION SEQADV 4DBB A UNP O35430 SER 577 DELETION SEQADV 4DBB A UNP O35430 HIS 578 DELETION SEQADV 4DBB A UNP O35430 PRO 579 DELETION SEQADV 4DBB A UNP O35430 SER 580 DELETION SEQADV 4DBB A UNP O35430 GLN 581 DELETION SEQADV 4DBB A UNP O35430 ASP 582 DELETION SEQADV 4DBB A UNP O35430 ALA 583 DELETION SEQADV 4DBB A UNP O35430 LYS 584 DELETION SEQADV 4DBB A UNP O35430 ARG 585 DELETION SEQRES 1 A 162 ASP PRO GLU ASP LEU ILE ASP GLY ILE ILE PHE ALA ALA SEQRES 2 A 162 ASN TYR LEU GLY SER THR GLN LEU LEU SER ASP LYS THR SEQRES 3 A 162 PRO SER LYS ASN VAL ARG MET MET GLN ALA GLN GLU ALA SEQRES 4 A 162 VAL SER ARG ILE LYS PRO GLU GLY GLU SER GLN PRO MET SEQRES 5 A 162 THR GLU VAL ASP LEU PHE ILE SER THR GLN ARG ILE LYS SEQRES 6 A 162 VAL LEU ASN ALA ASP THR GLN GLU PRO MET MET ASP HIS SEQRES 7 A 162 PRO LEU ARG THR ILE SER TYR ILE ALA ASP ILE GLY ASN SEQRES 8 A 162 ILE VAL VAL LEU MET ALA ARG ARG ARG MET PRO ARG SER SEQRES 9 A 162 GLN TYR LYS MET ILE CYS HIS VAL PHE GLU SER GLU ASP SEQRES 10 A 162 ALA GLN LEU ILE ALA GLN SER ILE GLY GLN ALA PHE SER SEQRES 11 A 162 VAL ALA TYR GLN GLU PHE LEU ARG ALA ASN GLY ILE ASN SEQRES 12 A 162 PRO GLU ASP LEU SER GLN LYS GLU TYR SER ASP LEU LEU SEQRES 13 A 162 ASN THR GLN ASP MET TYR HET CL A 701 1 HET ACY A 702 7 HET ACY A 703 7 HET IPA A 704 12 HET IPA A 705 12 HET GOL A 706 14 HET GOL A 707 14 HETNAM CL CHLORIDE ION HETNAM ACY ACETIC ACID HETNAM IPA ISOPROPYL ALCOHOL HETNAM GOL GLYCEROL HETSYN IPA 2-PROPANOL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 CL CL 1- FORMUL 3 ACY 2(C2 H4 O2) FORMUL 5 IPA 2(C3 H8 O) FORMUL 7 GOL 2(C3 H8 O3) FORMUL 9 HOH *78(H2 O) HELIX 1 1 SER A 480 ARG A 494 1 15 HELIX 2 2 ASP A 598 GLN A 615 1 18 HELIX 3 3 GLU A 616 LEU A 618 5 3 HELIX 4 4 ASN A 624 LEU A 628 5 5 HELIX 5 5 SER A 629 GLN A 640 1 12 SHEET 1 A 7 PRO A 538 PRO A 543 0 SHEET 2 A 7 ARG A 527 ASN A 532 -1 N VAL A 530 O MET A 539 SHEET 3 A 7 THR A 517 SER A 524 -1 N ASP A 520 O LEU A 531 SHEET 4 A 7 GLY A 460 SER A 475 -1 N ALA A 465 O VAL A 519 SHEET 5 A 7 TYR A 587 GLU A 595 -1 O VAL A 593 N LEU A 468 SHEET 6 A 7 ILE A 556 ARG A 563 -1 N ARG A 563 O LYS A 588 SHEET 7 A 7 ILE A 547 ILE A 553 -1 N ALA A 551 O VAL A 558 SITE 1 AC1 1 SER A 524 SITE 1 AC2 5 ASP A 459 GLN A 487 GLU A 490 HOH A 803 SITE 2 AC2 5 HOH A 851 SITE 1 AC3 4 HIS A 542 ARG A 563 ARG A 564 HOH A 867 SITE 1 AC4 3 ILE A 458 ILE A 523 GLN A 608 SITE 1 AC5 3 VAL A 492 SER A 493 HOH A 853 SITE 1 AC6 5 LEU A 468 GLY A 469 SER A 470 ALA A 491 SITE 2 AC6 5 ILE A 495 SITE 1 AC7 2 PRO A 543 ARG A 545 CRYST1 64.729 64.729 115.155 90.00 90.00 90.00 P 41 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015449 0.000000 0.000000 0.00000 SCALE2 0.000000 0.015449 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008684 0.00000