HEADER HYDROLASE 17-JAN-12 4DCC TITLE CRYSTAL STRUCTURE OF HAD FAMILY ENZYME BT-2542 FROM BACTEROIDES TITLE 2 THETAIOTAOMICRON (TARGET EFI-501088) COMPND MOL_ID: 1; COMPND 2 MOLECULE: PUTATIVE HALOACID DEHALOGENASE-LIKE HYDROLASE; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACTEROIDES THETAIOTAOMICRON; SOURCE 3 ORGANISM_TAXID: 818; SOURCE 4 GENE: BT_2542; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET KEYWDS HYDROLASE, MAGNESIUM BINDING SITE, ENZYME FUNCTION INITIATIVE, KEYWDS 2 STRUCTURAL GENOMICS EXPDTA X-RAY DIFFRACTION AUTHOR Y.PATSKOVSKY,R.TORO,R.BHOSLE,B.HILLERICH,R.D.SEIDEL,E.WASHINGTON, AUTHOR 2 A.SCOTT GLENN,S.CHOWDHURY,B.EVANS,J.HAMMONDS,W.D.ZENCHECK,H.J.IMKER, AUTHOR 3 J.A.GERLT,K.N.ALLEN,D.DUNAWAY-MARIANO,S.C.ALMO,ENZYME FUNCTION AUTHOR 4 INITIATIVE (EFI) REVDAT 3 13-SEP-23 4DCC 1 REMARK SEQADV LINK REVDAT 2 24-JAN-18 4DCC 1 AUTHOR REVDAT 1 22-FEB-12 4DCC 0 JRNL AUTH Y.PATSKOVSKY,R.TORO,R.BHOSLE,B.HILLERICH,R.D.SEIDEL, JRNL AUTH 2 E.WASHINGTON,A.SCOTT GLENN,S.CHOWDHURY,B.EVANS,J.HAMMONDS, JRNL AUTH 3 W.D.ZENCHECK,H.J.IMKER,K.N.ALLEN,D.DUNAWAY-MARIANO, JRNL AUTH 4 J.A.GERLT,S.C.ALMO JRNL TITL CRYSTAL STRUCTURE OF PROTEIN BT-2542 FROM BACTEROIDES JRNL TITL 2 THETAIOTAOMICRON (TARGET EFI-501088) JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.65 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0109 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.65 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 29399 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.177 REMARK 3 R VALUE (WORKING SET) : 0.176 REMARK 3 FREE R VALUE : 0.210 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.200 REMARK 3 FREE R VALUE TEST SET COUNT : 962 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.65 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.69 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2115 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.87 REMARK 3 BIN R VALUE (WORKING SET) : 0.3620 REMARK 3 BIN FREE R VALUE SET COUNT : 80 REMARK 3 BIN FREE R VALUE : 0.3860 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1656 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 11 REMARK 3 SOLVENT ATOMS : 203 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 27.21 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 38.75 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.70000 REMARK 3 B22 (A**2) : 3.15000 REMARK 3 B33 (A**2) : -2.44000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.088 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.090 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.071 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.164 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.972 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.958 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1755 ; 0.011 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2365 ; 1.304 ; 1.967 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 211 ; 5.380 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 86 ;37.288 ;24.651 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 329 ;13.704 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 9 ;11.440 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 252 ; 0.094 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1323 ; 0.006 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1042 ; 3.279 ; 2.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1680 ; 4.845 ; 3.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 713 ; 6.909 ; 4.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 682 ;10.339 ; 7.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 4DCC COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 23-JAN-12. REMARK 100 THE DEPOSITION ID IS D_1000070151. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-DEC-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 2 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X29A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.075 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 30924 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.640 REMARK 200 RESOLUTION RANGE LOW (A) : 70.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -5.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.6 REMARK 200 DATA REDUNDANCY : 9.800 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.10000 REMARK 200 FOR THE DATA SET : 7.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.64 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.67 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.1 REMARK 200 DATA REDUNDANCY IN SHELL : 7.60 REMARK 200 R MERGE FOR SHELL (I) : 0.90000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MR REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 2I6X REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.33 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.33 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.6M SODIUM ACETATE, PH 7.5, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 294K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X,-Y+1/2,Z REMARK 290 7555 -X+1/2,Y,-Z REMARK 290 8555 X,-Y,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 25.12600 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 65.63500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 37.71200 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 65.63500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 25.12600 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 37.71200 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 25.12600 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 37.71200 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 65.63500 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 37.71200 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 25.12600 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 65.63500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 551 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -21 REMARK 465 HIS A -20 REMARK 465 HIS A -19 REMARK 465 HIS A -18 REMARK 465 HIS A -17 REMARK 465 HIS A -16 REMARK 465 HIS A -15 REMARK 465 SER A -14 REMARK 465 SER A -13 REMARK 465 GLY A -12 REMARK 465 VAL A -11 REMARK 465 ASP A -10 REMARK 465 LEU A -9 REMARK 465 GLY A -8 REMARK 465 THR A -7 REMARK 465 GLU A -6 REMARK 465 ASN A -5 REMARK 465 LEU A -4 REMARK 465 TYR A -3 REMARK 465 PHE A -2 REMARK 465 GLN A -1 REMARK 465 SER A 0 REMARK 465 MET A 1 REMARK 465 LYS A 2 REMARK 465 SER A 3 REMARK 465 LYS A 207 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 4 CG CD CE NZ REMARK 470 GLN A 35 CG CD OE1 NE2 REMARK 470 ASN A 36 CG OD1 ND2 REMARK 470 LYS A 40 CG CD CE NZ REMARK 470 THR A 43 OG1 CG2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 36 46.35 -96.12 REMARK 500 HIS A 44 -0.87 84.86 REMARK 500 MET A 74 55.13 -93.33 REMARK 500 VAL A 89 -78.84 -105.71 REMARK 500 ARG A 130 -128.04 55.21 REMARK 500 ARG A 130 -125.06 50.32 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 302 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 12 OD2 REMARK 620 2 GLY A 14 O 97.5 REMARK 620 3 ASP A 176 OD1 113.6 90.0 REMARK 620 4 HOH A 521 O 80.8 174.2 85.6 REMARK 620 5 HOH A 567 O 166.3 79.8 80.0 103.2 REMARK 620 6 HOH A 598 O 114.0 93.6 131.2 92.2 53.1 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 303 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 135 O REMARK 620 2 PHE A 138 O 91.6 REMARK 620 3 HOH A 516 O 86.6 171.0 REMARK 620 4 HOH A 517 O 162.5 92.7 86.5 REMARK 620 5 HOH A 563 O 108.9 117.5 71.4 84.0 REMARK 620 6 HOH A 563 O 141.0 94.7 92.3 55.4 36.0 REMARK 620 7 HOH A 590 O 91.4 81.0 90.2 72.5 151.1 127.6 REMARK 620 N 1 2 3 4 5 6 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 303 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EFI-501088 RELATED DB: TARGETTRACK DBREF 4DCC A 1 207 UNP Q8A4Q5 Q8A4Q5_BACTN 1 207 SEQADV 4DCC MET A -21 UNP Q8A4Q5 EXPRESSION TAG SEQADV 4DCC HIS A -20 UNP Q8A4Q5 EXPRESSION TAG SEQADV 4DCC HIS A -19 UNP Q8A4Q5 EXPRESSION TAG SEQADV 4DCC HIS A -18 UNP Q8A4Q5 EXPRESSION TAG SEQADV 4DCC HIS A -17 UNP Q8A4Q5 EXPRESSION TAG SEQADV 4DCC HIS A -16 UNP Q8A4Q5 EXPRESSION TAG SEQADV 4DCC HIS A -15 UNP Q8A4Q5 EXPRESSION TAG SEQADV 4DCC SER A -14 UNP Q8A4Q5 EXPRESSION TAG SEQADV 4DCC SER A -13 UNP Q8A4Q5 EXPRESSION TAG SEQADV 4DCC GLY A -12 UNP Q8A4Q5 EXPRESSION TAG SEQADV 4DCC VAL A -11 UNP Q8A4Q5 EXPRESSION TAG SEQADV 4DCC ASP A -10 UNP Q8A4Q5 EXPRESSION TAG SEQADV 4DCC LEU A -9 UNP Q8A4Q5 EXPRESSION TAG SEQADV 4DCC GLY A -8 UNP Q8A4Q5 EXPRESSION TAG SEQADV 4DCC THR A -7 UNP Q8A4Q5 EXPRESSION TAG SEQADV 4DCC GLU A -6 UNP Q8A4Q5 EXPRESSION TAG SEQADV 4DCC ASN A -5 UNP Q8A4Q5 EXPRESSION TAG SEQADV 4DCC LEU A -4 UNP Q8A4Q5 EXPRESSION TAG SEQADV 4DCC TYR A -3 UNP Q8A4Q5 EXPRESSION TAG SEQADV 4DCC PHE A -2 UNP Q8A4Q5 EXPRESSION TAG SEQADV 4DCC GLN A -1 UNP Q8A4Q5 EXPRESSION TAG SEQADV 4DCC SER A 0 UNP Q8A4Q5 EXPRESSION TAG SEQRES 1 A 229 MET HIS HIS HIS HIS HIS HIS SER SER GLY VAL ASP LEU SEQRES 2 A 229 GLY THR GLU ASN LEU TYR PHE GLN SER MET LYS SER LYS SEQRES 3 A 229 GLY ILE LYS ASN LEU LEU ILE ASP LEU GLY GLY VAL LEU SEQRES 4 A 229 ILE ASN LEU ASP ARG GLU ARG CYS ILE GLU ASN PHE LYS SEQRES 5 A 229 LYS ILE GLY PHE GLN ASN ILE GLU GLU LYS PHE CYS THR SEQRES 6 A 229 HIS GLN LEU ASP GLY ILE PHE LEU GLN GLN GLU LYS GLY SEQRES 7 A 229 LEU ILE THR PRO ALA GLU PHE ARG ASP GLY ILE ARG GLU SEQRES 8 A 229 MET MET GLY LYS MET VAL SER ASP LYS GLN ILE ASP ALA SEQRES 9 A 229 ALA TRP ASN SER PHE LEU VAL ASP ILE PRO THR TYR LYS SEQRES 10 A 229 LEU ASP LEU LEU LEU LYS LEU ARG GLU LYS TYR VAL VAL SEQRES 11 A 229 TYR LEU LEU SER ASN THR ASN ASP ILE HIS TRP LYS TRP SEQRES 12 A 229 VAL CYS LYS ASN ALA PHE PRO TYR ARG THR PHE LYS VAL SEQRES 13 A 229 GLU ASP TYR PHE GLU LYS THR TYR LEU SER TYR GLU MET SEQRES 14 A 229 LYS MET ALA LYS PRO GLU PRO GLU ILE PHE LYS ALA VAL SEQRES 15 A 229 THR GLU ASP ALA GLY ILE ASP PRO LYS GLU THR PHE PHE SEQRES 16 A 229 ILE ASP ASP SER GLU ILE ASN CYS LYS VAL ALA GLN GLU SEQRES 17 A 229 LEU GLY ILE SER THR TYR THR PRO LYS ALA GLY GLU ASP SEQRES 18 A 229 TRP SER HIS LEU PHE ARG LYS LYS HET CL A 301 1 HET NA A 302 1 HET NA A 303 1 HET UNL A 304 8 HETNAM CL CHLORIDE ION HETNAM NA SODIUM ION HETNAM UNL UNKNOWN LIGAND FORMUL 2 CL CL 1- FORMUL 3 NA 2(NA 1+) FORMUL 6 HOH *203(H2 O) HELIX 1 1 ASP A 21 GLY A 33 1 13 HELIX 2 2 ASN A 36 HIS A 44 1 9 HELIX 3 3 HIS A 44 LYS A 55 1 12 HELIX 4 4 THR A 59 GLY A 72 1 14 HELIX 5 5 SER A 76 SER A 86 1 11 HELIX 6 6 PRO A 92 ARG A 103 1 12 HELIX 7 7 ASN A 115 ALA A 126 1 12 HELIX 8 8 LYS A 133 PHE A 138 1 6 HELIX 9 9 SER A 144 LYS A 148 1 5 HELIX 10 10 GLU A 153 GLY A 165 1 13 HELIX 11 11 ASP A 167 LYS A 169 5 3 HELIX 12 12 SER A 177 LEU A 187 1 11 HELIX 13 13 ASP A 199 ARG A 205 5 7 SHEET 1 A 5 LYS A 140 LEU A 143 0 SHEET 2 A 5 VAL A 107 SER A 112 1 N LEU A 110 O TYR A 142 SHEET 3 A 5 ASN A 8 ILE A 11 1 N LEU A 9 O TYR A 109 SHEET 4 A 5 THR A 171 ILE A 174 1 O PHE A 172 N LEU A 10 SHEET 5 A 5 SER A 190 TYR A 192 1 O SER A 190 N PHE A 173 LINK OD2 ASP A 12 NA NA A 302 1555 1555 2.16 LINK O GLY A 14 NA NA A 302 1555 1555 2.36 LINK O GLU A 135 NA NA A 303 1555 1555 2.22 LINK O PHE A 138 NA NA A 303 1555 1555 2.38 LINK OD1 ASP A 176 NA NA A 302 1555 1555 2.22 LINK NA NA A 302 O HOH A 521 1555 1555 2.31 LINK NA NA A 302 O HOH A 567 1555 1555 2.85 LINK NA NA A 302 O HOH A 598 1555 1555 2.46 LINK NA NA A 303 O HOH A 516 1555 1555 2.45 LINK NA NA A 303 O HOH A 517 1555 1555 2.55 LINK NA NA A 303 O BHOH A 563 1555 1555 2.42 LINK NA NA A 303 O AHOH A 563 1555 1555 2.87 LINK NA NA A 303 O HOH A 590 1555 1555 2.83 CISPEP 1 LYS A 151 PRO A 152 0 8.25 SITE 1 AC1 6 ASP A 12 LEU A 13 GLY A 14 SER A 112 SITE 2 AC1 6 ASN A 113 HOH A 583 SITE 1 AC2 6 ASP A 12 GLY A 14 ASP A 176 HOH A 521 SITE 2 AC2 6 HOH A 567 HOH A 598 SITE 1 AC3 6 GLU A 135 PHE A 138 HOH A 516 HOH A 517 SITE 2 AC3 6 HOH A 563 HOH A 590 CRYST1 50.252 75.424 131.270 90.00 90.00 90.00 I 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019900 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013258 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007618 0.00000