HEADER IMMUNE SYSTEM 18-JAN-12 4DDD TITLE CRYSTAL STRUCTURE OF AN IMMUNOGENIC PROTEIN FROM EHRLICHIA CHAFFEENSIS COMPND MOL_ID: 1; COMPND 2 MOLECULE: IMMUNOGENIC PROTEIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: EHRLICHIA CHAFFEENSIS; SOURCE 3 ORGANISM_TAXID: 205920; SOURCE 4 STRAIN: ARKANSAS; SOURCE 5 GENE: ECH_0645; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: AVA0421 KEYWDS SSGCID, STRUCTURAL GENOMICS, SEATTLE STRUCTURAL GENOMICS CENTER FOR KEYWDS 2 INFECTIOUS DISEASE, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR SEATTLE STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE (SSGCID) REVDAT 1 23-MAY-12 4DDD 0 JRNL AUTH SEATTLE STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE JRNL AUTH 2 (SSGCID),J.ABENDROTH,A.S.GARDBERG,B.L.STAKER JRNL TITL CRYSTAL STRUCTURE OF AN IMMUNOGENIC PROTEIN FROM EHRLICHIA JRNL TITL 2 CHAFFEENSIS JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.6.0117 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.49 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 3 NUMBER OF REFLECTIONS : 29858 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.161 REMARK 3 R VALUE (WORKING SET) : 0.159 REMARK 3 FREE R VALUE : 0.188 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1515 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.90 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.95 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1762 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 90.53 REMARK 3 BIN R VALUE (WORKING SET) : 0.2170 REMARK 3 BIN FREE R VALUE SET COUNT : 92 REMARK 3 BIN FREE R VALUE : 0.2610 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2300 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 19 REMARK 3 SOLVENT ATOMS : 307 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 22.47 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 13.57 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.07000 REMARK 3 B22 (A**2) : 0.11000 REMARK 3 B33 (A**2) : -0.04000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.121 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.113 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.070 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.519 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.956 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.942 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2448 ; 0.015 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): 1642 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3329 ; 1.685 ; 1.978 REMARK 3 BOND ANGLES OTHERS (DEGREES): 4056 ; 0.962 ; 3.002 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 328 ; 6.037 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 99 ;40.188 ;25.051 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 449 ;13.122 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 10 ;16.148 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 390 ; 0.104 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2715 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 459 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 26 A 122 REMARK 3 ORIGIN FOR THE GROUP (A): 7.4040 48.6940 13.3140 REMARK 3 T TENSOR REMARK 3 T11: 0.0261 T22: 0.0118 REMARK 3 T33: 0.0144 T12: 0.0051 REMARK 3 T13: 0.0063 T23: 0.0014 REMARK 3 L TENSOR REMARK 3 L11: 0.6224 L22: 0.7775 REMARK 3 L33: 0.6092 L12: -0.1866 REMARK 3 L13: -0.0977 L23: -0.2931 REMARK 3 S TENSOR REMARK 3 S11: -0.0208 S12: -0.0595 S13: 0.0071 REMARK 3 S21: 0.0331 S22: 0.0269 S23: -0.0238 REMARK 3 S31: -0.0010 S32: 0.0134 S33: -0.0061 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 123 A 259 REMARK 3 ORIGIN FOR THE GROUP (A): -3.2200 71.4450 7.8390 REMARK 3 T TENSOR REMARK 3 T11: 0.0429 T22: 0.0033 REMARK 3 T33: 0.0106 T12: 0.0014 REMARK 3 T13: 0.0080 T23: 0.0030 REMARK 3 L TENSOR REMARK 3 L11: 0.8063 L22: 1.0154 REMARK 3 L33: 0.9220 L12: 0.2924 REMARK 3 L13: -0.0855 L23: 0.3744 REMARK 3 S TENSOR REMARK 3 S11: -0.0072 S12: -0.0152 S13: 0.0414 REMARK 3 S21: -0.0405 S22: -0.0222 S23: -0.0029 REMARK 3 S31: -0.0379 S32: -0.0044 S33: 0.0293 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 260 A 325 REMARK 3 ORIGIN FOR THE GROUP (A): 4.2280 43.5290 1.3510 REMARK 3 T TENSOR REMARK 3 T11: 0.0270 T22: 0.0215 REMARK 3 T33: 0.0164 T12: -0.0061 REMARK 3 T13: -0.0052 T23: -0.0097 REMARK 3 L TENSOR REMARK 3 L11: 1.5356 L22: 0.9471 REMARK 3 L33: 0.4750 L12: -0.6772 REMARK 3 L13: -0.0174 L23: -0.1785 REMARK 3 S TENSOR REMARK 3 S11: 0.0174 S12: 0.0981 S13: -0.1152 REMARK 3 S21: -0.0865 S22: -0.0236 S23: 0.0549 REMARK 3 S31: 0.0116 S32: -0.0062 S33: 0.0062 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE REMARK 4 REMARK 4 4DDD COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 19-JAN-12. REMARK 100 THE RCSB ID CODE IS RCSB070187. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-AUG-11; 09-JAN-12 REMARK 200 TEMPERATURE (KELVIN) : 100.0; 100 REMARK 200 PH : 8.50 REMARK 200 NUMBER OF CRYSTALS USED : 2 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N; N REMARK 200 RADIATION SOURCE : ROTATING ANODE; ROTATING ANODE REMARK 200 BEAMLINE : NULL; NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU MICROMAX-007 HF; RIGAKU REMARK 200 MICROMAX-007 HF REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M; M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418; 1.5418 REMARK 200 MONOCHROMATOR : RIGAKU VARIMAX; RIGAKU VARIMAX REMARK 200 OPTICS : RIGAKU VARIMAX; RIGAKU VARIMAX REMARK 200 REMARK 200 DETECTOR TYPE : CCD; CCD REMARK 200 DETECTOR MANUFACTURER : RIGAKU SATURN 944; RIGAKU SATURN REMARK 200 944+ REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 29858 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 200 DATA REDUNDANCY : 5.940 REMARK 200 R MERGE (I) : 0.06100 REMARK 200 R SYM (I) : 0.06100 REMARK 200 FOR THE DATA SET : 21.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.95 REMARK 200 COMPLETENESS FOR SHELL (%) : 91.3 REMARK 200 DATA REDUNDANCY IN SHELL : 2.80 REMARK 200 R MERGE FOR SHELL (I) : 0.30900 REMARK 200 R SYM FOR SHELL (I) : 0.30900 REMARK 200 FOR SHELL : 3.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH; SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.45 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.59 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: EBS SCREEN JCSG+ H6: 100MM BISTRIS PH REMARK 280 6.5, 17% PEG 10K, 100MM AMMONIUM ACETATE, EHCHA.00493.A.A2 REMARK 280 PS01157 AT 18MG/ML; CRYSTAL FOR PHASING WAS SOAKED IN REMARK 280 CRYSTALLIZATION BUFFER CONTAINING 1M IODIDE, PH 8.5., VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 290K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 31.35500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 45.48500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 32.72000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 45.48500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 31.35500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 32.72000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -1 REMARK 465 ALA A 0 REMARK 465 HIS A 1 REMARK 465 HIS A 2 REMARK 465 HIS A 3 REMARK 465 HIS A 4 REMARK 465 HIS A 5 REMARK 465 HIS A 6 REMARK 465 MET A 7 REMARK 465 GLY A 8 REMARK 465 THR A 9 REMARK 465 LEU A 10 REMARK 465 GLU A 11 REMARK 465 ALA A 12 REMARK 465 GLN A 13 REMARK 465 THR A 14 REMARK 465 GLN A 15 REMARK 465 GLY A 16 REMARK 465 PRO A 17 REMARK 465 GLY A 18 REMARK 465 SER A 19 REMARK 465 MET A 20 REMARK 465 ALA A 21 REMARK 465 SER A 22 REMARK 465 SER A 23 REMARK 465 ASP A 24 REMARK 465 ASP A 25 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 60 CG CD CE NZ REMARK 470 LYS A 108 CG CD CE NZ REMARK 470 LYS A 171 CG CD CE NZ REMARK 470 ARG A 225 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 325 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU A 115 CB - CG - CD2 ANGL. DEV. = 12.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 36 -114.17 -132.18 REMARK 500 LEU A 121 -144.63 -114.42 REMARK 500 THR A 255 -162.86 -162.82 REMARK 500 THR A 264 -158.11 -152.47 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 405 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: SSGCID-EHCHA.00493.A RELATED DB: TARGETTRACK DBREF 4DDD A 21 325 UNP Q2GGH8 Q2GGH8_EHRCR 21 325 SEQADV 4DDD MET A -1 UNP Q2GGH8 EXPRESSION TAG SEQADV 4DDD ALA A 0 UNP Q2GGH8 EXPRESSION TAG SEQADV 4DDD HIS A 1 UNP Q2GGH8 EXPRESSION TAG SEQADV 4DDD HIS A 2 UNP Q2GGH8 EXPRESSION TAG SEQADV 4DDD HIS A 3 UNP Q2GGH8 EXPRESSION TAG SEQADV 4DDD HIS A 4 UNP Q2GGH8 EXPRESSION TAG SEQADV 4DDD HIS A 5 UNP Q2GGH8 EXPRESSION TAG SEQADV 4DDD HIS A 6 UNP Q2GGH8 EXPRESSION TAG SEQADV 4DDD MET A 7 UNP Q2GGH8 EXPRESSION TAG SEQADV 4DDD GLY A 8 UNP Q2GGH8 EXPRESSION TAG SEQADV 4DDD THR A 9 UNP Q2GGH8 EXPRESSION TAG SEQADV 4DDD LEU A 10 UNP Q2GGH8 EXPRESSION TAG SEQADV 4DDD GLU A 11 UNP Q2GGH8 EXPRESSION TAG SEQADV 4DDD ALA A 12 UNP Q2GGH8 EXPRESSION TAG SEQADV 4DDD GLN A 13 UNP Q2GGH8 EXPRESSION TAG SEQADV 4DDD THR A 14 UNP Q2GGH8 EXPRESSION TAG SEQADV 4DDD GLN A 15 UNP Q2GGH8 EXPRESSION TAG SEQADV 4DDD GLY A 16 UNP Q2GGH8 EXPRESSION TAG SEQADV 4DDD PRO A 17 UNP Q2GGH8 EXPRESSION TAG SEQADV 4DDD GLY A 18 UNP Q2GGH8 EXPRESSION TAG SEQADV 4DDD SER A 19 UNP Q2GGH8 EXPRESSION TAG SEQADV 4DDD MET A 20 UNP Q2GGH8 EXPRESSION TAG SEQRES 1 A 327 MET ALA HIS HIS HIS HIS HIS HIS MET GLY THR LEU GLU SEQRES 2 A 327 ALA GLN THR GLN GLY PRO GLY SER MET ALA SER SER ASP SEQRES 3 A 327 ASP SER LEU ASN ARG GLU TYR ILE LEU ILE GLY THR GLY SEQRES 4 A 327 SER MET THR GLY VAL TYR TYR PRO ILE GLY GLY SER ILE SEQRES 5 A 327 CYS ARG PHE ILE ALA SER ASP TYR GLY LYS ASP ASN LYS SEQRES 6 A 327 ILE ILE CYS SER ILE SER SER THR THR GLY SER VAL TYR SEQRES 7 A 327 ASN LEU ASN SER ILE ARG TYR SER ASN MET ASP ILE SER SEQRES 8 A 327 ILE VAL GLN SER ASP LEU GLU TYR TYR ALA TYR ASN GLY SEQRES 9 A 327 LEU GLY PHE TYR GLU LYS MET LEU PRO MET ASP ASN LEU SEQRES 10 A 327 ARG MET LEU ALA SER LEU HIS LYS GLU TYR LEU THR ILE SEQRES 11 A 327 VAL VAL LYS LYS SER SER ASN ILE SER VAL ILE ASP ASP SEQRES 12 A 327 ILE LYS GLY LYS ARG VAL ASN ILE GLY SER PRO GLY THR SEQRES 13 A 327 GLY VAL ARG VAL ALA MET LEU LYS LEU LEU GLY GLU LYS SEQRES 14 A 327 GLY TRP THR LYS LYS ASP PHE SER VAL MET ALA GLU LEU SEQRES 15 A 327 LYS SER SER GLU GLN ALA GLN ALA LEU CYS ASP ASN LYS SEQRES 16 A 327 ILE ASP VAL MET VAL ASP VAL ILE GLY HIS PRO ASN ALA SEQRES 17 A 327 SER ILE GLN GLU ALA SER ALA THR CYS ASP ILE LYS PHE SEQRES 18 A 327 ILE PRO LEU ASP ASP ARG LEU ILE ASP ASP LEU HIS ALA SEQRES 19 A 327 LYS TYR PRO TYR TYR GLN LYS ASP ILE ILE SER GLY GLY SEQRES 20 A 327 LEU TYR ASN ASP SER PRO ASP ILE GLN THR VAL SER VAL SEQRES 21 A 327 LYS ALA SER LEU VAL THR THR THR GLU LEU SER ASN ASP SEQRES 22 A 327 LEU ALA TYR LYS ILE VAL LYS SER ILE ALA THR HIS LEU SEQRES 23 A 327 ARG GLU LEU ARG SER ILE THR GLY ALA LEU LYS THR LEU SEQRES 24 A 327 THR VAL GLN ASP MET ALA LYS SER SER ILE THR PRO MET SEQRES 25 A 327 HIS ASP GLY ALA GLU ARG TYR TYR LYS GLU ILE GLY ALA SEQRES 26 A 327 ILE LYS HET CL A 401 1 HET EDO A 402 4 HET EDO A 403 4 HET EDO A 404 4 HET GOL A 405 6 HETNAM CL CHLORIDE ION HETNAM EDO 1,2-ETHANEDIOL HETNAM GOL GLYCEROL HETSYN EDO ETHYLENE GLYCOL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 CL CL 1- FORMUL 3 EDO 3(C2 H6 O2) FORMUL 6 GOL C3 H8 O3 FORMUL 7 HOH *307(H2 O) HELIX 1 1 VAL A 42 GLY A 59 1 18 HELIX 2 2 LYS A 60 ASN A 62 5 3 HELIX 3 3 GLY A 73 TYR A 83 1 11 HELIX 4 4 SER A 93 GLY A 102 1 10 HELIX 5 5 LEU A 103 GLU A 107 5 5 HELIX 6 6 VAL A 138 LYS A 143 5 6 HELIX 7 7 THR A 154 GLY A 168 1 15 HELIX 8 8 THR A 170 PHE A 174 5 5 HELIX 9 9 LYS A 181 ASP A 191 1 11 HELIX 10 10 ASN A 205 CYS A 215 1 11 HELIX 11 11 ASP A 223 TYR A 234 1 12 HELIX 12 12 SER A 269 HIS A 283 1 15 HELIX 13 13 HIS A 283 SER A 289 1 7 HELIX 14 14 ILE A 290 LYS A 295 5 6 HELIX 15 15 THR A 298 ALA A 303 1 6 HELIX 16 16 HIS A 311 ILE A 321 1 11 SHEET 1 A 6 ILE A 64 SER A 69 0 SHEET 2 A 6 GLU A 30 GLY A 35 1 N ILE A 32 O ILE A 65 SHEET 3 A 6 ILE A 88 GLN A 92 1 O ILE A 88 N GLY A 35 SHEET 4 A 6 ILE A 253 THR A 265 -1 O VAL A 263 N SER A 89 SHEET 5 A 6 LEU A 115 LYS A 131 -1 N ARG A 116 O THR A 264 SHEET 6 A 6 ILE A 217 PHE A 219 -1 O LYS A 218 N VAL A 130 SHEET 1 B 4 MET A 197 ILE A 201 0 SHEET 2 B 4 LEU A 115 LYS A 131 -1 N THR A 127 O ASP A 199 SHEET 3 B 4 ILE A 253 THR A 265 -1 O THR A 264 N ARG A 116 SHEET 4 B 4 GLN A 238 ILE A 242 -1 N GLN A 238 O SER A 257 SHEET 1 C 2 ARG A 146 ASN A 148 0 SHEET 2 C 2 VAL A 176 ALA A 178 1 O VAL A 176 N VAL A 147 SSBOND 1 CYS A 51 CYS A 66 1555 1555 2.04 SSBOND 2 CYS A 190 CYS A 215 1555 1555 2.03 CISPEP 1 HIS A 203 PRO A 204 0 -2.92 SITE 1 AC1 5 SER A 74 GLN A 92 THR A 154 GLY A 155 SITE 2 AC1 5 HOH A 719 SITE 1 AC2 8 PHE A 219 SER A 243 GLY A 244 GLY A 245 SITE 2 AC2 8 LEU A 246 SER A 250 PRO A 251 ILE A 253 SITE 1 AC3 3 ILE A 241 ILE A 242 SER A 243 SITE 1 AC4 7 TYR A 76 ASN A 85 ARG A 146 ASN A 192 SITE 2 AC4 7 ASP A 195 HOH A 517 HOH A 751 SITE 1 AC5 9 GLY A 37 SER A 38 VAL A 42 TYR A 43 SITE 2 AC5 9 THR A 72 HOH A 510 HOH A 520 HOH A 696 SITE 3 AC5 9 HOH A 719 CRYST1 62.710 65.440 90.970 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015946 0.000000 0.000000 0.00000 SCALE2 0.000000 0.015281 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010993 0.00000