data_4DDP # _entry.id 4DDP # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.388 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4DDP pdb_00004ddp 10.2210/pdb4ddp/pdb RCSB RCSB070199 ? ? WWPDB D_1000070199 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2012-02-22 2 'Structure model' 1 1 2024-03-20 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' chem_comp_atom 2 2 'Structure model' chem_comp_bond 3 2 'Structure model' database_2 # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_database_2.pdbx_DOI' 2 2 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4DDP _pdbx_database_status.recvd_initial_deposition_date 2012-01-19 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Huang, W.J.' 1 'Choi, W.Y.' 2 'Wang, J.W.' 3 'Shi, Y.G.' 4 # _citation.id primary _citation.title 'Crystal structure and biochemical analyses reveal Beclin 1 as a novel membrane binding protein' _citation.journal_abbrev 'Cell Res.' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year 2012 _citation.journal_id_ASTM ? _citation.country CN _citation.journal_id_ISSN 1001-0602 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 22310240 _citation.pdbx_database_id_DOI 10.1038/cr.2012.24 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Huang, W.' 1 ? primary 'Choi, W.' 2 ? primary 'Hu, W.' 3 ? primary 'Mi, N.' 4 ? primary 'Guo, Q.' 5 ? primary 'Ma, M.' 6 ? primary 'Liu, M.' 7 ? primary 'Tian, Y.' 8 ? primary 'Lu, P.' 9 ? primary 'Wang, F.L.' 10 ? primary 'Deng, H.' 11 ? primary 'Liu, L.' 12 ? primary 'Gao, N.' 13 ? primary 'Yu, L.' 14 ? primary 'Shi, Y.' 15 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man Beclin-1 24459.807 1 ? ? 'UNP residues 241-450' ? 2 water nat water 18.015 115 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Coiled-coil myosin-like BCL2-interacting protein, Protein GT197' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;LELDDELKSVENQMRYAQTQLDKLKKTNVFNATFHIWHSGQFGTINNFRLGRLPSVPVEWNEINAAWGQTVLLLHALANK MGLKFQRYRLVPYGNHSYLESLTDKSKELPLYCSGGLRFFWDNKFDHAMVAFLDCVQQFKEEVEKGETRFCLPYRMDVEK GKIEDTGGSGGSYSIKTQFNSEEQWTKALKFMLTNLKWGLAWVSSQFYNK ; _entity_poly.pdbx_seq_one_letter_code_can ;LELDDELKSVENQMRYAQTQLDKLKKTNVFNATFHIWHSGQFGTINNFRLGRLPSVPVEWNEINAAWGQTVLLLHALANK MGLKFQRYRLVPYGNHSYLESLTDKSKELPLYCSGGLRFFWDNKFDHAMVAFLDCVQQFKEEVEKGETRFCLPYRMDVEK GKIEDTGGSGGSYSIKTQFNSEEQWTKALKFMLTNLKWGLAWVSSQFYNK ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 LEU n 1 2 GLU n 1 3 LEU n 1 4 ASP n 1 5 ASP n 1 6 GLU n 1 7 LEU n 1 8 LYS n 1 9 SER n 1 10 VAL n 1 11 GLU n 1 12 ASN n 1 13 GLN n 1 14 MET n 1 15 ARG n 1 16 TYR n 1 17 ALA n 1 18 GLN n 1 19 THR n 1 20 GLN n 1 21 LEU n 1 22 ASP n 1 23 LYS n 1 24 LEU n 1 25 LYS n 1 26 LYS n 1 27 THR n 1 28 ASN n 1 29 VAL n 1 30 PHE n 1 31 ASN n 1 32 ALA n 1 33 THR n 1 34 PHE n 1 35 HIS n 1 36 ILE n 1 37 TRP n 1 38 HIS n 1 39 SER n 1 40 GLY n 1 41 GLN n 1 42 PHE n 1 43 GLY n 1 44 THR n 1 45 ILE n 1 46 ASN n 1 47 ASN n 1 48 PHE n 1 49 ARG n 1 50 LEU n 1 51 GLY n 1 52 ARG n 1 53 LEU n 1 54 PRO n 1 55 SER n 1 56 VAL n 1 57 PRO n 1 58 VAL n 1 59 GLU n 1 60 TRP n 1 61 ASN n 1 62 GLU n 1 63 ILE n 1 64 ASN n 1 65 ALA n 1 66 ALA n 1 67 TRP n 1 68 GLY n 1 69 GLN n 1 70 THR n 1 71 VAL n 1 72 LEU n 1 73 LEU n 1 74 LEU n 1 75 HIS n 1 76 ALA n 1 77 LEU n 1 78 ALA n 1 79 ASN n 1 80 LYS n 1 81 MET n 1 82 GLY n 1 83 LEU n 1 84 LYS n 1 85 PHE n 1 86 GLN n 1 87 ARG n 1 88 TYR n 1 89 ARG n 1 90 LEU n 1 91 VAL n 1 92 PRO n 1 93 TYR n 1 94 GLY n 1 95 ASN n 1 96 HIS n 1 97 SER n 1 98 TYR n 1 99 LEU n 1 100 GLU n 1 101 SER n 1 102 LEU n 1 103 THR n 1 104 ASP n 1 105 LYS n 1 106 SER n 1 107 LYS n 1 108 GLU n 1 109 LEU n 1 110 PRO n 1 111 LEU n 1 112 TYR n 1 113 CYS n 1 114 SER n 1 115 GLY n 1 116 GLY n 1 117 LEU n 1 118 ARG n 1 119 PHE n 1 120 PHE n 1 121 TRP n 1 122 ASP n 1 123 ASN n 1 124 LYS n 1 125 PHE n 1 126 ASP n 1 127 HIS n 1 128 ALA n 1 129 MET n 1 130 VAL n 1 131 ALA n 1 132 PHE n 1 133 LEU n 1 134 ASP n 1 135 CYS n 1 136 VAL n 1 137 GLN n 1 138 GLN n 1 139 PHE n 1 140 LYS n 1 141 GLU n 1 142 GLU n 1 143 VAL n 1 144 GLU n 1 145 LYS n 1 146 GLY n 1 147 GLU n 1 148 THR n 1 149 ARG n 1 150 PHE n 1 151 CYS n 1 152 LEU n 1 153 PRO n 1 154 TYR n 1 155 ARG n 1 156 MET n 1 157 ASP n 1 158 VAL n 1 159 GLU n 1 160 LYS n 1 161 GLY n 1 162 LYS n 1 163 ILE n 1 164 GLU n 1 165 ASP n 1 166 THR n 1 167 GLY n 1 168 GLY n 1 169 SER n 1 170 GLY n 1 171 GLY n 1 172 SER n 1 173 TYR n 1 174 SER n 1 175 ILE n 1 176 LYS n 1 177 THR n 1 178 GLN n 1 179 PHE n 1 180 ASN n 1 181 SER n 1 182 GLU n 1 183 GLU n 1 184 GLN n 1 185 TRP n 1 186 THR n 1 187 LYS n 1 188 ALA n 1 189 LEU n 1 190 LYS n 1 191 PHE n 1 192 MET n 1 193 LEU n 1 194 THR n 1 195 ASN n 1 196 LEU n 1 197 LYS n 1 198 TRP n 1 199 GLY n 1 200 LEU n 1 201 ALA n 1 202 TRP n 1 203 VAL n 1 204 SER n 1 205 SER n 1 206 GLN n 1 207 PHE n 1 208 TYR n 1 209 ASN n 1 210 LYS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'BECN1, GT197' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 LEU 1 241 ? ? ? A . n A 1 2 GLU 2 242 ? ? ? A . n A 1 3 LEU 3 243 ? ? ? A . n A 1 4 ASP 4 244 ? ? ? A . n A 1 5 ASP 5 245 ? ? ? A . n A 1 6 GLU 6 246 ? ? ? A . n A 1 7 LEU 7 247 ? ? ? A . n A 1 8 LYS 8 248 248 LYS LYS A . n A 1 9 SER 9 249 249 SER SER A . n A 1 10 VAL 10 250 250 VAL VAL A . n A 1 11 GLU 11 251 251 GLU GLU A . n A 1 12 ASN 12 252 252 ASN ASN A . n A 1 13 GLN 13 253 253 GLN GLN A . n A 1 14 MET 14 254 254 MET MET A . n A 1 15 ARG 15 255 255 ARG ARG A . n A 1 16 TYR 16 256 256 TYR TYR A . n A 1 17 ALA 17 257 257 ALA ALA A . n A 1 18 GLN 18 258 258 GLN GLN A . n A 1 19 THR 19 259 259 THR THR A . n A 1 20 GLN 20 260 260 GLN GLN A . n A 1 21 LEU 21 261 261 LEU LEU A . n A 1 22 ASP 22 262 262 ASP ASP A . n A 1 23 LYS 23 263 263 LYS LYS A . n A 1 24 LEU 24 264 264 LEU LEU A . n A 1 25 LYS 25 265 ? ? ? A . n A 1 26 LYS 26 266 ? ? ? A . n A 1 27 THR 27 267 ? ? ? A . n A 1 28 ASN 28 268 ? ? ? A . n A 1 29 VAL 29 269 269 VAL VAL A . n A 1 30 PHE 30 270 270 PHE PHE A . n A 1 31 ASN 31 271 271 ASN ASN A . n A 1 32 ALA 32 272 272 ALA ALA A . n A 1 33 THR 33 273 273 THR THR A . n A 1 34 PHE 34 274 274 PHE PHE A . n A 1 35 HIS 35 275 275 HIS HIS A . n A 1 36 ILE 36 276 276 ILE ILE A . n A 1 37 TRP 37 277 277 TRP TRP A . n A 1 38 HIS 38 278 278 HIS HIS A . n A 1 39 SER 39 279 279 SER SER A . n A 1 40 GLY 40 280 280 GLY GLY A . n A 1 41 GLN 41 281 281 GLN GLN A . n A 1 42 PHE 42 282 282 PHE PHE A . n A 1 43 GLY 43 283 283 GLY GLY A . n A 1 44 THR 44 284 284 THR THR A . n A 1 45 ILE 45 285 285 ILE ILE A . n A 1 46 ASN 46 286 286 ASN ASN A . n A 1 47 ASN 47 287 287 ASN ASN A . n A 1 48 PHE 48 288 288 PHE PHE A . n A 1 49 ARG 49 289 289 ARG ARG A . n A 1 50 LEU 50 290 290 LEU LEU A . n A 1 51 GLY 51 291 291 GLY GLY A . n A 1 52 ARG 52 292 292 ARG ARG A . n A 1 53 LEU 53 293 293 LEU LEU A . n A 1 54 PRO 54 294 294 PRO PRO A . n A 1 55 SER 55 295 295 SER SER A . n A 1 56 VAL 56 296 296 VAL VAL A . n A 1 57 PRO 57 297 297 PRO PRO A . n A 1 58 VAL 58 298 298 VAL VAL A . n A 1 59 GLU 59 299 299 GLU GLU A . n A 1 60 TRP 60 300 300 TRP TRP A . n A 1 61 ASN 61 301 301 ASN ASN A . n A 1 62 GLU 62 302 302 GLU GLU A . n A 1 63 ILE 63 303 303 ILE ILE A . n A 1 64 ASN 64 304 304 ASN ASN A . n A 1 65 ALA 65 305 305 ALA ALA A . n A 1 66 ALA 66 306 306 ALA ALA A . n A 1 67 TRP 67 307 307 TRP TRP A . n A 1 68 GLY 68 308 308 GLY GLY A . n A 1 69 GLN 69 309 309 GLN GLN A . n A 1 70 THR 70 310 310 THR THR A . n A 1 71 VAL 71 311 311 VAL VAL A . n A 1 72 LEU 72 312 312 LEU LEU A . n A 1 73 LEU 73 313 313 LEU LEU A . n A 1 74 LEU 74 314 314 LEU LEU A . n A 1 75 HIS 75 315 315 HIS HIS A . n A 1 76 ALA 76 316 316 ALA ALA A . n A 1 77 LEU 77 317 317 LEU LEU A . n A 1 78 ALA 78 318 318 ALA ALA A . n A 1 79 ASN 79 319 319 ASN ASN A . n A 1 80 LYS 80 320 320 LYS LYS A . n A 1 81 MET 81 321 321 MET MET A . n A 1 82 GLY 82 322 322 GLY GLY A . n A 1 83 LEU 83 323 323 LEU LEU A . n A 1 84 LYS 84 324 324 LYS LYS A . n A 1 85 PHE 85 325 325 PHE PHE A . n A 1 86 GLN 86 326 326 GLN GLN A . n A 1 87 ARG 87 327 327 ARG ARG A . n A 1 88 TYR 88 328 328 TYR TYR A . n A 1 89 ARG 89 329 329 ARG ARG A . n A 1 90 LEU 90 330 330 LEU LEU A . n A 1 91 VAL 91 331 331 VAL VAL A . n A 1 92 PRO 92 332 332 PRO PRO A . n A 1 93 TYR 93 333 333 TYR TYR A . n A 1 94 GLY 94 334 334 GLY GLY A . n A 1 95 ASN 95 335 335 ASN ASN A . n A 1 96 HIS 96 336 336 HIS HIS A . n A 1 97 SER 97 337 337 SER SER A . n A 1 98 TYR 98 338 338 TYR TYR A . n A 1 99 LEU 99 339 339 LEU LEU A . n A 1 100 GLU 100 340 340 GLU GLU A . n A 1 101 SER 101 341 341 SER SER A . n A 1 102 LEU 102 342 342 LEU LEU A . n A 1 103 THR 103 343 343 THR THR A . n A 1 104 ASP 104 344 344 ASP ASP A . n A 1 105 LYS 105 345 345 LYS LYS A . n A 1 106 SER 106 346 346 SER SER A . n A 1 107 LYS 107 347 347 LYS LYS A . n A 1 108 GLU 108 348 348 GLU GLU A . n A 1 109 LEU 109 349 349 LEU LEU A . n A 1 110 PRO 110 350 350 PRO PRO A . n A 1 111 LEU 111 351 351 LEU LEU A . n A 1 112 TYR 112 352 352 TYR TYR A . n A 1 113 CYS 113 353 353 CYS CYS A . n A 1 114 SER 114 354 354 SER SER A . n A 1 115 GLY 115 355 355 GLY GLY A . n A 1 116 GLY 116 356 356 GLY GLY A . n A 1 117 LEU 117 357 357 LEU LEU A . n A 1 118 ARG 118 358 358 ARG ARG A . n A 1 119 PHE 119 359 359 PHE PHE A . n A 1 120 PHE 120 360 360 PHE PHE A . n A 1 121 TRP 121 361 361 TRP TRP A . n A 1 122 ASP 122 362 362 ASP ASP A . n A 1 123 ASN 123 363 363 ASN ASN A . n A 1 124 LYS 124 364 364 LYS LYS A . n A 1 125 PHE 125 365 365 PHE PHE A . n A 1 126 ASP 126 366 366 ASP ASP A . n A 1 127 HIS 127 367 367 HIS HIS A . n A 1 128 ALA 128 368 368 ALA ALA A . n A 1 129 MET 129 369 369 MET MET A . n A 1 130 VAL 130 370 370 VAL VAL A . n A 1 131 ALA 131 371 371 ALA ALA A . n A 1 132 PHE 132 372 372 PHE PHE A . n A 1 133 LEU 133 373 373 LEU LEU A . n A 1 134 ASP 134 374 374 ASP ASP A . n A 1 135 CYS 135 375 375 CYS CYS A . n A 1 136 VAL 136 376 376 VAL VAL A . n A 1 137 GLN 137 377 377 GLN GLN A . n A 1 138 GLN 138 378 378 GLN GLN A . n A 1 139 PHE 139 379 379 PHE PHE A . n A 1 140 LYS 140 380 380 LYS LYS A . n A 1 141 GLU 141 381 381 GLU GLU A . n A 1 142 GLU 142 382 382 GLU GLU A . n A 1 143 VAL 143 383 383 VAL VAL A . n A 1 144 GLU 144 384 384 GLU GLU A . n A 1 145 LYS 145 385 385 LYS LYS A . n A 1 146 GLY 146 386 386 GLY GLY A . n A 1 147 GLU 147 387 ? ? ? A . n A 1 148 THR 148 388 388 THR THR A . n A 1 149 ARG 149 389 389 ARG ARG A . n A 1 150 PHE 150 390 390 PHE PHE A . n A 1 151 CYS 151 391 391 CYS CYS A . n A 1 152 LEU 152 392 392 LEU LEU A . n A 1 153 PRO 153 393 393 PRO PRO A . n A 1 154 TYR 154 394 394 TYR TYR A . n A 1 155 ARG 155 395 395 ARG ARG A . n A 1 156 MET 156 396 396 MET MET A . n A 1 157 ASP 157 397 397 ASP ASP A . n A 1 158 VAL 158 398 398 VAL VAL A . n A 1 159 GLU 159 399 399 GLU GLU A . n A 1 160 LYS 160 400 400 LYS LYS A . n A 1 161 GLY 161 401 401 GLY GLY A . n A 1 162 LYS 162 402 402 LYS LYS A . n A 1 163 ILE 163 403 403 ILE ILE A . n A 1 164 GLU 164 404 404 GLU GLU A . n A 1 165 ASP 165 405 405 ASP ASP A . n A 1 166 THR 166 406 406 THR THR A . n A 1 167 GLY 167 407 407 GLY GLY A . n A 1 168 GLY 168 408 408 GLY GLY A . n A 1 169 SER 169 409 409 SER SER A . n A 1 170 GLY 170 410 410 GLY GLY A . n A 1 171 GLY 171 411 411 GLY GLY A . n A 1 172 SER 172 412 412 SER SER A . n A 1 173 TYR 173 413 413 TYR TYR A . n A 1 174 SER 174 414 414 SER SER A . n A 1 175 ILE 175 415 415 ILE ILE A . n A 1 176 LYS 176 416 416 LYS LYS A . n A 1 177 THR 177 417 417 THR THR A . n A 1 178 GLN 178 418 418 GLN GLN A . n A 1 179 PHE 179 419 419 PHE PHE A . n A 1 180 ASN 180 420 420 ASN ASN A . n A 1 181 SER 181 421 421 SER SER A . n A 1 182 GLU 182 422 422 GLU GLU A . n A 1 183 GLU 183 423 423 GLU GLU A . n A 1 184 GLN 184 424 424 GLN GLN A . n A 1 185 TRP 185 425 425 TRP TRP A . n A 1 186 THR 186 426 426 THR THR A . n A 1 187 LYS 187 427 427 LYS LYS A . n A 1 188 ALA 188 428 428 ALA ALA A . n A 1 189 LEU 189 429 429 LEU LEU A . n A 1 190 LYS 190 430 430 LYS LYS A . n A 1 191 PHE 191 431 431 PHE PHE A . n A 1 192 MET 192 432 432 MET MET A . n A 1 193 LEU 193 433 433 LEU LEU A . n A 1 194 THR 194 434 434 THR THR A . n A 1 195 ASN 195 435 435 ASN ASN A . n A 1 196 LEU 196 436 436 LEU LEU A . n A 1 197 LYS 197 437 437 LYS LYS A . n A 1 198 TRP 198 438 438 TRP TRP A . n A 1 199 GLY 199 439 439 GLY GLY A . n A 1 200 LEU 200 440 440 LEU LEU A . n A 1 201 ALA 201 441 441 ALA ALA A . n A 1 202 TRP 202 442 442 TRP TRP A . n A 1 203 VAL 203 443 443 VAL VAL A . n A 1 204 SER 204 444 444 SER SER A . n A 1 205 SER 205 445 445 SER SER A . n A 1 206 GLN 206 446 446 GLN GLN A . n A 1 207 PHE 207 447 447 PHE PHE A . n A 1 208 TYR 208 448 ? ? ? A . n A 1 209 ASN 209 449 ? ? ? A . n A 1 210 LYS 210 450 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HOH 1 501 1 HOH HOH A . B 2 HOH 2 502 2 HOH HOH A . B 2 HOH 3 503 3 HOH HOH A . B 2 HOH 4 504 4 HOH HOH A . B 2 HOH 5 505 5 HOH HOH A . B 2 HOH 6 506 6 HOH HOH A . B 2 HOH 7 507 7 HOH HOH A . B 2 HOH 8 508 8 HOH HOH A . B 2 HOH 9 509 9 HOH HOH A . B 2 HOH 10 510 10 HOH HOH A . B 2 HOH 11 511 11 HOH HOH A . B 2 HOH 12 512 12 HOH HOH A . B 2 HOH 13 513 13 HOH HOH A . B 2 HOH 14 514 14 HOH HOH A . B 2 HOH 15 515 15 HOH HOH A . B 2 HOH 16 516 16 HOH HOH A . B 2 HOH 17 517 17 HOH HOH A . B 2 HOH 18 518 18 HOH HOH A . B 2 HOH 19 519 19 HOH HOH A . B 2 HOH 20 520 20 HOH HOH A . B 2 HOH 21 521 21 HOH HOH A . B 2 HOH 22 522 22 HOH HOH A . B 2 HOH 23 523 23 HOH HOH A . B 2 HOH 24 524 24 HOH HOH A . B 2 HOH 25 525 25 HOH HOH A . B 2 HOH 26 526 26 HOH HOH A . B 2 HOH 27 527 27 HOH HOH A . B 2 HOH 28 528 28 HOH HOH A . B 2 HOH 29 529 29 HOH HOH A . B 2 HOH 30 530 30 HOH HOH A . B 2 HOH 31 531 31 HOH HOH A . B 2 HOH 32 532 32 HOH HOH A . B 2 HOH 33 533 33 HOH HOH A . B 2 HOH 34 534 34 HOH HOH A . B 2 HOH 35 535 35 HOH HOH A . B 2 HOH 36 536 36 HOH HOH A . B 2 HOH 37 537 37 HOH HOH A . B 2 HOH 38 538 38 HOH HOH A . B 2 HOH 39 539 39 HOH HOH A . B 2 HOH 40 540 40 HOH HOH A . B 2 HOH 41 541 41 HOH HOH A . B 2 HOH 42 542 42 HOH HOH A . B 2 HOH 43 543 43 HOH HOH A . B 2 HOH 44 544 44 HOH HOH A . B 2 HOH 45 545 45 HOH HOH A . B 2 HOH 46 546 46 HOH HOH A . B 2 HOH 47 547 47 HOH HOH A . B 2 HOH 48 548 48 HOH HOH A . B 2 HOH 49 549 49 HOH HOH A . B 2 HOH 50 550 50 HOH HOH A . B 2 HOH 51 551 51 HOH HOH A . B 2 HOH 52 552 52 HOH HOH A . B 2 HOH 53 553 53 HOH HOH A . B 2 HOH 54 554 54 HOH HOH A . B 2 HOH 55 555 55 HOH HOH A . B 2 HOH 56 556 56 HOH HOH A . B 2 HOH 57 557 57 HOH HOH A . B 2 HOH 58 558 58 HOH HOH A . B 2 HOH 59 559 59 HOH HOH A . B 2 HOH 60 560 60 HOH HOH A . B 2 HOH 61 561 61 HOH HOH A . B 2 HOH 62 562 62 HOH HOH A . B 2 HOH 63 563 63 HOH HOH A . B 2 HOH 64 564 64 HOH HOH A . B 2 HOH 65 565 65 HOH HOH A . B 2 HOH 66 566 66 HOH HOH A . B 2 HOH 67 567 67 HOH HOH A . B 2 HOH 68 568 68 HOH HOH A . B 2 HOH 69 569 69 HOH HOH A . B 2 HOH 70 570 70 HOH HOH A . B 2 HOH 71 571 71 HOH HOH A . B 2 HOH 72 572 72 HOH HOH A . B 2 HOH 73 573 73 HOH HOH A . B 2 HOH 74 574 74 HOH HOH A . B 2 HOH 75 575 75 HOH HOH A . B 2 HOH 76 576 76 HOH HOH A . B 2 HOH 77 577 77 HOH HOH A . B 2 HOH 78 578 78 HOH HOH A . B 2 HOH 79 579 79 HOH HOH A . B 2 HOH 80 580 80 HOH HOH A . B 2 HOH 81 581 81 HOH HOH A . B 2 HOH 82 582 82 HOH HOH A . B 2 HOH 83 583 83 HOH HOH A . B 2 HOH 84 584 84 HOH HOH A . B 2 HOH 85 585 85 HOH HOH A . B 2 HOH 86 586 86 HOH HOH A . B 2 HOH 87 587 87 HOH HOH A . B 2 HOH 88 588 88 HOH HOH A . B 2 HOH 89 589 89 HOH HOH A . B 2 HOH 90 590 90 HOH HOH A . B 2 HOH 91 591 91 HOH HOH A . B 2 HOH 92 592 92 HOH HOH A . B 2 HOH 93 593 93 HOH HOH A . B 2 HOH 94 594 94 HOH HOH A . B 2 HOH 95 595 95 HOH HOH A . B 2 HOH 96 596 96 HOH HOH A . B 2 HOH 97 597 97 HOH HOH A . B 2 HOH 98 598 98 HOH HOH A . B 2 HOH 99 599 99 HOH HOH A . B 2 HOH 100 600 100 HOH HOH A . B 2 HOH 101 601 101 HOH HOH A . B 2 HOH 102 602 102 HOH HOH A . B 2 HOH 103 603 103 HOH HOH A . B 2 HOH 104 604 104 HOH HOH A . B 2 HOH 105 605 105 HOH HOH A . B 2 HOH 106 606 106 HOH HOH A . B 2 HOH 107 607 107 HOH HOH A . B 2 HOH 108 608 108 HOH HOH A . B 2 HOH 109 609 109 HOH HOH A . B 2 HOH 110 610 110 HOH HOH A . B 2 HOH 111 611 113 HOH HOH A . B 2 HOH 112 612 114 HOH HOH A . B 2 HOH 113 613 117 HOH HOH A . B 2 HOH 114 614 118 HOH HOH A . B 2 HOH 115 615 119 HOH HOH A . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ARG 389 ? CG ? A ARG 149 CG 2 1 Y 1 A ARG 389 ? CD ? A ARG 149 CD 3 1 Y 1 A ARG 389 ? NE ? A ARG 149 NE 4 1 Y 1 A ARG 389 ? CZ ? A ARG 149 CZ 5 1 Y 1 A ARG 389 ? NH1 ? A ARG 149 NH1 6 1 Y 1 A ARG 389 ? NH2 ? A ARG 149 NH2 # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal CBASS 'data collection' . ? 1 PHASER phasing . ? 2 PHENIX refinement '(phenix.refine: dev_596)' ? 3 HKL-2000 'data reduction' . ? 4 HKL-2000 'data scaling' . ? 5 # _cell.entry_id 4DDP _cell.length_a 80.746 _cell.length_b 33.563 _cell.length_c 74.765 _cell.angle_alpha 90.00 _cell.angle_beta 113.49 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4DDP _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? # _exptl.entry_id 4DDP _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 1.90 _exptl_crystal.density_percent_sol 35.24 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 291 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 8.5 _exptl_crystal_grow.pdbx_details '30% PEG 3350, 0.3M NaCl, 0.1M Tris pH 8.5, VAPOR DIFFUSION, HANGING DROP, temperature 291K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'RAYONIX MX-225' _diffrn_detector.pdbx_collection_date 2009-12-02 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Si 111 CHANNEL' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.0000 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SPRING-8 BEAMLINE BL41XU' _diffrn_source.pdbx_synchrotron_site SPring-8 _diffrn_source.pdbx_synchrotron_beamline BL41XU _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.0000 # _reflns.entry_id 4DDP _reflns.observed_criterion_sigma_I 2 _reflns.observed_criterion_sigma_F 2 _reflns.d_resolution_low 50 _reflns.d_resolution_high 1.547 _reflns.number_obs 26572 _reflns.number_all ? _reflns.percent_possible_obs 97.8 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.55 _reflns_shell.d_res_low 1.61 _reflns_shell.percent_possible_all 93.3 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.number_possible ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.meanI_over_sigI_all ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 4DDP _refine.ls_number_reflns_obs 24700 _refine.ls_number_reflns_all 25256 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.00 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 32.408 _refine.ls_d_res_high 1.547 _refine.ls_percent_reflns_obs 90.74 _refine.ls_R_factor_obs 0.1770 _refine.ls_R_factor_all 0.1770 _refine.ls_R_factor_R_work 0.1755 _refine.ls_R_factor_R_free 0.2034 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.03 _refine.ls_number_reflns_R_free 1243 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 40.9722 _refine.aniso_B[1][1] 19.2043 _refine.aniso_B[2][2] -9.6744 _refine.aniso_B[3][3] -9.5299 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] -6.5855 _refine.aniso_B[2][3] 0.0000 _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol 0.436 _refine.solvent_model_param_bsol 43.947 _refine.pdbx_solvent_vdw_probe_radii 1.10 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 1.01 _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.13 _refine.pdbx_overall_phase_error 26.89 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set 0.7867 _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1590 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 115 _refine_hist.number_atoms_total 1705 _refine_hist.d_res_high 1.547 _refine_hist.d_res_low 32.408 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id f_bond_d 0.012 ? ? 1625 ? 'X-RAY DIFFRACTION' f_angle_d 1.274 ? ? 2190 ? 'X-RAY DIFFRACTION' f_dihedral_angle_d 16.034 ? ? 582 ? 'X-RAY DIFFRACTION' f_chiral_restr 0.083 ? ? 225 ? 'X-RAY DIFFRACTION' f_plane_restr 0.007 ? ? 277 ? 'X-RAY DIFFRACTION' # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.redundancy_reflns_obs 'X-RAY DIFFRACTION' 9 1.5466 1.6085 2055 0.2951 72.00 0.3269 . . 124 . . . . 'X-RAY DIFFRACTION' 9 1.6085 1.6817 2358 0.2520 84.00 0.2897 . . 150 . . . . 'X-RAY DIFFRACTION' 9 1.6817 1.7704 2505 0.2132 88.00 0.2324 . . 112 . . . . 'X-RAY DIFFRACTION' 9 1.7704 1.8813 2629 0.1894 92.00 0.2579 . . 120 . . . . 'X-RAY DIFFRACTION' 9 1.8813 2.0265 2723 0.1788 96.00 0.2078 . . 143 . . . . 'X-RAY DIFFRACTION' 9 2.0265 2.2304 2797 0.1614 97.00 0.1816 . . 148 . . . . 'X-RAY DIFFRACTION' 9 2.2304 2.5530 2825 0.1514 98.00 0.2016 . . 147 . . . . 'X-RAY DIFFRACTION' 9 2.5530 3.2161 2840 0.1655 98.00 0.2140 . . 152 . . . . 'X-RAY DIFFRACTION' 9 3.2161 32.4151 2725 0.1700 92.00 0.1767 . . 147 . . . . # _database_PDB_matrix.entry_id 4DDP _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 4DDP _struct.title 'crystal structure of Beclin 1 evolutionarily conserved domain(ECD)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4DDP _struct_keywords.pdbx_keywords 'MEMBRANE PROTEIN' _struct_keywords.text 'Beclin 1, ECD, autophagy, membrane binding, MEMBRANE PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code BECN1_HUMAN _struct_ref.pdbx_db_accession Q14457 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;LELDDELKSVENQMRYAQTQLDKLKKTNVFNATFHIWHSGQFGTINNFRLGRLPSVPVEWNEINAAWGQTVLLLHALANK MGLKFQRYRLVPYGNHSYLESLTDKSKELPLYCSGGLRFFWDNKFDHAMVAFLDCVQQFKEEVEKGETRFCLPYRMDVEK GKIEDTGGSGGSYSIKTQFNSEEQWTKALKFMLTNLKWGLAWVSSQFYNK ; _struct_ref.pdbx_align_begin 241 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4DDP _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 210 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q14457 _struct_ref_seq.db_align_beg 241 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 450 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 241 _struct_ref_seq.pdbx_auth_seq_align_end 450 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 9 ? LYS A 23 ? SER A 249 LYS A 263 1 ? 15 HELX_P HELX_P2 2 GLU A 59 ? GLY A 82 ? GLU A 299 GLY A 322 1 ? 24 HELX_P HELX_P3 3 TYR A 93 ? HIS A 96 ? TYR A 333 HIS A 336 5 ? 4 HELX_P HELX_P4 4 LEU A 117 ? TRP A 121 ? LEU A 357 TRP A 361 5 ? 5 HELX_P HELX_P5 5 ASN A 123 ? LYS A 145 ? ASN A 363 LYS A 385 1 ? 23 HELX_P HELX_P6 6 SER A 181 ? PHE A 207 ? SER A 421 PHE A 447 1 ? 27 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 3 ? B ? 3 ? C ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ILE A 36 ? SER A 39 ? ILE A 276 SER A 279 A 2 PHE A 42 ? ILE A 45 ? PHE A 282 ILE A 285 A 3 PHE A 48 ? ARG A 49 ? PHE A 288 ARG A 289 B 1 TYR A 88 ? VAL A 91 ? TYR A 328 VAL A 331 B 2 TYR A 98 ? SER A 101 ? TYR A 338 SER A 341 B 3 LEU A 109 ? PRO A 110 ? LEU A 349 PRO A 350 C 1 MET A 156 ? ASP A 157 ? MET A 396 ASP A 397 C 2 LYS A 162 ? GLU A 164 ? LYS A 402 GLU A 404 C 3 SER A 172 ? SER A 174 ? SER A 412 SER A 414 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N TRP A 37 ? N TRP A 277 O THR A 44 ? O THR A 284 A 2 3 N ILE A 45 ? N ILE A 285 O PHE A 48 ? O PHE A 288 B 1 2 N VAL A 91 ? N VAL A 331 O TYR A 98 ? O TYR A 338 B 2 3 N LEU A 99 ? N LEU A 339 O LEU A 109 ? O LEU A 349 C 1 2 N ASP A 157 ? N ASP A 397 O LYS A 162 ? O LYS A 402 C 2 3 N ILE A 163 ? N ILE A 403 O TYR A 173 ? O TYR A 413 # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 O _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 HOH _pdbx_validate_close_contact.auth_seq_id_1 546 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 596 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.08 # loop_ _pdbx_validate_symm_contact.id _pdbx_validate_symm_contact.PDB_model_num _pdbx_validate_symm_contact.auth_atom_id_1 _pdbx_validate_symm_contact.auth_asym_id_1 _pdbx_validate_symm_contact.auth_comp_id_1 _pdbx_validate_symm_contact.auth_seq_id_1 _pdbx_validate_symm_contact.PDB_ins_code_1 _pdbx_validate_symm_contact.label_alt_id_1 _pdbx_validate_symm_contact.site_symmetry_1 _pdbx_validate_symm_contact.auth_atom_id_2 _pdbx_validate_symm_contact.auth_asym_id_2 _pdbx_validate_symm_contact.auth_comp_id_2 _pdbx_validate_symm_contact.auth_seq_id_2 _pdbx_validate_symm_contact.PDB_ins_code_2 _pdbx_validate_symm_contact.label_alt_id_2 _pdbx_validate_symm_contact.site_symmetry_2 _pdbx_validate_symm_contact.dist 1 1 HD22 A ASN 271 ? ? 1_555 HD22 A ASN 271 ? ? 2_655 0.63 2 1 ND2 A ASN 271 ? ? 1_555 HD22 A ASN 271 ? ? 2_655 1.57 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 TRP A 277 ? ? -152.20 -158.21 2 1 ARG A 327 ? ? 76.49 -31.70 3 1 TYR A 333 ? ? -154.14 49.56 4 1 LEU A 351 ? ? -104.29 56.31 # _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x 28.8198 _pdbx_refine_tls.origin_y -3.9292 _pdbx_refine_tls.origin_z 17.3240 _pdbx_refine_tls.T[1][1] 0.2124 _pdbx_refine_tls.T[2][2] 0.2068 _pdbx_refine_tls.T[3][3] 0.1896 _pdbx_refine_tls.T[1][2] 0.0417 _pdbx_refine_tls.T[1][3] 0.0034 _pdbx_refine_tls.T[2][3] 0.0037 _pdbx_refine_tls.L[1][1] 0.8275 _pdbx_refine_tls.L[2][2] 1.8621 _pdbx_refine_tls.L[3][3] 1.5292 _pdbx_refine_tls.L[1][2] 0.2464 _pdbx_refine_tls.L[1][3] 0.0823 _pdbx_refine_tls.L[2][3] 0.0560 _pdbx_refine_tls.S[1][1] -0.0182 _pdbx_refine_tls.S[1][2] 0.0220 _pdbx_refine_tls.S[1][3] -0.0268 _pdbx_refine_tls.S[2][1] -0.0437 _pdbx_refine_tls.S[2][2] -0.0418 _pdbx_refine_tls.S[2][3] -0.0853 _pdbx_refine_tls.S[3][1] 0.0665 _pdbx_refine_tls.S[3][2] 0.1095 _pdbx_refine_tls.S[3][3] 0.0077 # _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_auth_asym_id ? _pdbx_refine_tls_group.beg_auth_seq_id ? _pdbx_refine_tls_group.beg_label_asym_id ? _pdbx_refine_tls_group.beg_label_seq_id ? _pdbx_refine_tls_group.end_auth_asym_id ? _pdbx_refine_tls_group.end_auth_seq_id ? _pdbx_refine_tls_group.end_label_asym_id ? _pdbx_refine_tls_group.end_label_seq_id ? _pdbx_refine_tls_group.selection ? _pdbx_refine_tls_group.selection_details 'chain A' # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A LEU 241 ? A LEU 1 2 1 Y 1 A GLU 242 ? A GLU 2 3 1 Y 1 A LEU 243 ? A LEU 3 4 1 Y 1 A ASP 244 ? A ASP 4 5 1 Y 1 A ASP 245 ? A ASP 5 6 1 Y 1 A GLU 246 ? A GLU 6 7 1 Y 1 A LEU 247 ? A LEU 7 8 1 Y 1 A LYS 265 ? A LYS 25 9 1 Y 1 A LYS 266 ? A LYS 26 10 1 Y 1 A THR 267 ? A THR 27 11 1 Y 1 A ASN 268 ? A ASN 28 12 1 Y 1 A GLU 387 ? A GLU 147 13 1 Y 1 A TYR 448 ? A TYR 208 14 1 Y 1 A ASN 449 ? A ASN 209 15 1 Y 1 A LYS 450 ? A LYS 210 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 HOH O O N N 158 HOH H1 H N N 159 HOH H2 H N N 160 ILE N N N N 161 ILE CA C N S 162 ILE C C N N 163 ILE O O N N 164 ILE CB C N S 165 ILE CG1 C N N 166 ILE CG2 C N N 167 ILE CD1 C N N 168 ILE OXT O N N 169 ILE H H N N 170 ILE H2 H N N 171 ILE HA H N N 172 ILE HB H N N 173 ILE HG12 H N N 174 ILE HG13 H N N 175 ILE HG21 H N N 176 ILE HG22 H N N 177 ILE HG23 H N N 178 ILE HD11 H N N 179 ILE HD12 H N N 180 ILE HD13 H N N 181 ILE HXT H N N 182 LEU N N N N 183 LEU CA C N S 184 LEU C C N N 185 LEU O O N N 186 LEU CB C N N 187 LEU CG C N N 188 LEU CD1 C N N 189 LEU CD2 C N N 190 LEU OXT O N N 191 LEU H H N N 192 LEU H2 H N N 193 LEU HA H N N 194 LEU HB2 H N N 195 LEU HB3 H N N 196 LEU HG H N N 197 LEU HD11 H N N 198 LEU HD12 H N N 199 LEU HD13 H N N 200 LEU HD21 H N N 201 LEU HD22 H N N 202 LEU HD23 H N N 203 LEU HXT H N N 204 LYS N N N N 205 LYS CA C N S 206 LYS C C N N 207 LYS O O N N 208 LYS CB C N N 209 LYS CG C N N 210 LYS CD C N N 211 LYS CE C N N 212 LYS NZ N N N 213 LYS OXT O N N 214 LYS H H N N 215 LYS H2 H N N 216 LYS HA H N N 217 LYS HB2 H N N 218 LYS HB3 H N N 219 LYS HG2 H N N 220 LYS HG3 H N N 221 LYS HD2 H N N 222 LYS HD3 H N N 223 LYS HE2 H N N 224 LYS HE3 H N N 225 LYS HZ1 H N N 226 LYS HZ2 H N N 227 LYS HZ3 H N N 228 LYS HXT H N N 229 MET N N N N 230 MET CA C N S 231 MET C C N N 232 MET O O N N 233 MET CB C N N 234 MET CG C N N 235 MET SD S N N 236 MET CE C N N 237 MET OXT O N N 238 MET H H N N 239 MET H2 H N N 240 MET HA H N N 241 MET HB2 H N N 242 MET HB3 H N N 243 MET HG2 H N N 244 MET HG3 H N N 245 MET HE1 H N N 246 MET HE2 H N N 247 MET HE3 H N N 248 MET HXT H N N 249 PHE N N N N 250 PHE CA C N S 251 PHE C C N N 252 PHE O O N N 253 PHE CB C N N 254 PHE CG C Y N 255 PHE CD1 C Y N 256 PHE CD2 C Y N 257 PHE CE1 C Y N 258 PHE CE2 C Y N 259 PHE CZ C Y N 260 PHE OXT O N N 261 PHE H H N N 262 PHE H2 H N N 263 PHE HA H N N 264 PHE HB2 H N N 265 PHE HB3 H N N 266 PHE HD1 H N N 267 PHE HD2 H N N 268 PHE HE1 H N N 269 PHE HE2 H N N 270 PHE HZ H N N 271 PHE HXT H N N 272 PRO N N N N 273 PRO CA C N S 274 PRO C C N N 275 PRO O O N N 276 PRO CB C N N 277 PRO CG C N N 278 PRO CD C N N 279 PRO OXT O N N 280 PRO H H N N 281 PRO HA H N N 282 PRO HB2 H N N 283 PRO HB3 H N N 284 PRO HG2 H N N 285 PRO HG3 H N N 286 PRO HD2 H N N 287 PRO HD3 H N N 288 PRO HXT H N N 289 SER N N N N 290 SER CA C N S 291 SER C C N N 292 SER O O N N 293 SER CB C N N 294 SER OG O N N 295 SER OXT O N N 296 SER H H N N 297 SER H2 H N N 298 SER HA H N N 299 SER HB2 H N N 300 SER HB3 H N N 301 SER HG H N N 302 SER HXT H N N 303 THR N N N N 304 THR CA C N S 305 THR C C N N 306 THR O O N N 307 THR CB C N R 308 THR OG1 O N N 309 THR CG2 C N N 310 THR OXT O N N 311 THR H H N N 312 THR H2 H N N 313 THR HA H N N 314 THR HB H N N 315 THR HG1 H N N 316 THR HG21 H N N 317 THR HG22 H N N 318 THR HG23 H N N 319 THR HXT H N N 320 TRP N N N N 321 TRP CA C N S 322 TRP C C N N 323 TRP O O N N 324 TRP CB C N N 325 TRP CG C Y N 326 TRP CD1 C Y N 327 TRP CD2 C Y N 328 TRP NE1 N Y N 329 TRP CE2 C Y N 330 TRP CE3 C Y N 331 TRP CZ2 C Y N 332 TRP CZ3 C Y N 333 TRP CH2 C Y N 334 TRP OXT O N N 335 TRP H H N N 336 TRP H2 H N N 337 TRP HA H N N 338 TRP HB2 H N N 339 TRP HB3 H N N 340 TRP HD1 H N N 341 TRP HE1 H N N 342 TRP HE3 H N N 343 TRP HZ2 H N N 344 TRP HZ3 H N N 345 TRP HH2 H N N 346 TRP HXT H N N 347 TYR N N N N 348 TYR CA C N S 349 TYR C C N N 350 TYR O O N N 351 TYR CB C N N 352 TYR CG C Y N 353 TYR CD1 C Y N 354 TYR CD2 C Y N 355 TYR CE1 C Y N 356 TYR CE2 C Y N 357 TYR CZ C Y N 358 TYR OH O N N 359 TYR OXT O N N 360 TYR H H N N 361 TYR H2 H N N 362 TYR HA H N N 363 TYR HB2 H N N 364 TYR HB3 H N N 365 TYR HD1 H N N 366 TYR HD2 H N N 367 TYR HE1 H N N 368 TYR HE2 H N N 369 TYR HH H N N 370 TYR HXT H N N 371 VAL N N N N 372 VAL CA C N S 373 VAL C C N N 374 VAL O O N N 375 VAL CB C N N 376 VAL CG1 C N N 377 VAL CG2 C N N 378 VAL OXT O N N 379 VAL H H N N 380 VAL H2 H N N 381 VAL HA H N N 382 VAL HB H N N 383 VAL HG11 H N N 384 VAL HG12 H N N 385 VAL HG13 H N N 386 VAL HG21 H N N 387 VAL HG22 H N N 388 VAL HG23 H N N 389 VAL HXT H N N 390 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 ILE N CA sing N N 152 ILE N H sing N N 153 ILE N H2 sing N N 154 ILE CA C sing N N 155 ILE CA CB sing N N 156 ILE CA HA sing N N 157 ILE C O doub N N 158 ILE C OXT sing N N 159 ILE CB CG1 sing N N 160 ILE CB CG2 sing N N 161 ILE CB HB sing N N 162 ILE CG1 CD1 sing N N 163 ILE CG1 HG12 sing N N 164 ILE CG1 HG13 sing N N 165 ILE CG2 HG21 sing N N 166 ILE CG2 HG22 sing N N 167 ILE CG2 HG23 sing N N 168 ILE CD1 HD11 sing N N 169 ILE CD1 HD12 sing N N 170 ILE CD1 HD13 sing N N 171 ILE OXT HXT sing N N 172 LEU N CA sing N N 173 LEU N H sing N N 174 LEU N H2 sing N N 175 LEU CA C sing N N 176 LEU CA CB sing N N 177 LEU CA HA sing N N 178 LEU C O doub N N 179 LEU C OXT sing N N 180 LEU CB CG sing N N 181 LEU CB HB2 sing N N 182 LEU CB HB3 sing N N 183 LEU CG CD1 sing N N 184 LEU CG CD2 sing N N 185 LEU CG HG sing N N 186 LEU CD1 HD11 sing N N 187 LEU CD1 HD12 sing N N 188 LEU CD1 HD13 sing N N 189 LEU CD2 HD21 sing N N 190 LEU CD2 HD22 sing N N 191 LEU CD2 HD23 sing N N 192 LEU OXT HXT sing N N 193 LYS N CA sing N N 194 LYS N H sing N N 195 LYS N H2 sing N N 196 LYS CA C sing N N 197 LYS CA CB sing N N 198 LYS CA HA sing N N 199 LYS C O doub N N 200 LYS C OXT sing N N 201 LYS CB CG sing N N 202 LYS CB HB2 sing N N 203 LYS CB HB3 sing N N 204 LYS CG CD sing N N 205 LYS CG HG2 sing N N 206 LYS CG HG3 sing N N 207 LYS CD CE sing N N 208 LYS CD HD2 sing N N 209 LYS CD HD3 sing N N 210 LYS CE NZ sing N N 211 LYS CE HE2 sing N N 212 LYS CE HE3 sing N N 213 LYS NZ HZ1 sing N N 214 LYS NZ HZ2 sing N N 215 LYS NZ HZ3 sing N N 216 LYS OXT HXT sing N N 217 MET N CA sing N N 218 MET N H sing N N 219 MET N H2 sing N N 220 MET CA C sing N N 221 MET CA CB sing N N 222 MET CA HA sing N N 223 MET C O doub N N 224 MET C OXT sing N N 225 MET CB CG sing N N 226 MET CB HB2 sing N N 227 MET CB HB3 sing N N 228 MET CG SD sing N N 229 MET CG HG2 sing N N 230 MET CG HG3 sing N N 231 MET SD CE sing N N 232 MET CE HE1 sing N N 233 MET CE HE2 sing N N 234 MET CE HE3 sing N N 235 MET OXT HXT sing N N 236 PHE N CA sing N N 237 PHE N H sing N N 238 PHE N H2 sing N N 239 PHE CA C sing N N 240 PHE CA CB sing N N 241 PHE CA HA sing N N 242 PHE C O doub N N 243 PHE C OXT sing N N 244 PHE CB CG sing N N 245 PHE CB HB2 sing N N 246 PHE CB HB3 sing N N 247 PHE CG CD1 doub Y N 248 PHE CG CD2 sing Y N 249 PHE CD1 CE1 sing Y N 250 PHE CD1 HD1 sing N N 251 PHE CD2 CE2 doub Y N 252 PHE CD2 HD2 sing N N 253 PHE CE1 CZ doub Y N 254 PHE CE1 HE1 sing N N 255 PHE CE2 CZ sing Y N 256 PHE CE2 HE2 sing N N 257 PHE CZ HZ sing N N 258 PHE OXT HXT sing N N 259 PRO N CA sing N N 260 PRO N CD sing N N 261 PRO N H sing N N 262 PRO CA C sing N N 263 PRO CA CB sing N N 264 PRO CA HA sing N N 265 PRO C O doub N N 266 PRO C OXT sing N N 267 PRO CB CG sing N N 268 PRO CB HB2 sing N N 269 PRO CB HB3 sing N N 270 PRO CG CD sing N N 271 PRO CG HG2 sing N N 272 PRO CG HG3 sing N N 273 PRO CD HD2 sing N N 274 PRO CD HD3 sing N N 275 PRO OXT HXT sing N N 276 SER N CA sing N N 277 SER N H sing N N 278 SER N H2 sing N N 279 SER CA C sing N N 280 SER CA CB sing N N 281 SER CA HA sing N N 282 SER C O doub N N 283 SER C OXT sing N N 284 SER CB OG sing N N 285 SER CB HB2 sing N N 286 SER CB HB3 sing N N 287 SER OG HG sing N N 288 SER OXT HXT sing N N 289 THR N CA sing N N 290 THR N H sing N N 291 THR N H2 sing N N 292 THR CA C sing N N 293 THR CA CB sing N N 294 THR CA HA sing N N 295 THR C O doub N N 296 THR C OXT sing N N 297 THR CB OG1 sing N N 298 THR CB CG2 sing N N 299 THR CB HB sing N N 300 THR OG1 HG1 sing N N 301 THR CG2 HG21 sing N N 302 THR CG2 HG22 sing N N 303 THR CG2 HG23 sing N N 304 THR OXT HXT sing N N 305 TRP N CA sing N N 306 TRP N H sing N N 307 TRP N H2 sing N N 308 TRP CA C sing N N 309 TRP CA CB sing N N 310 TRP CA HA sing N N 311 TRP C O doub N N 312 TRP C OXT sing N N 313 TRP CB CG sing N N 314 TRP CB HB2 sing N N 315 TRP CB HB3 sing N N 316 TRP CG CD1 doub Y N 317 TRP CG CD2 sing Y N 318 TRP CD1 NE1 sing Y N 319 TRP CD1 HD1 sing N N 320 TRP CD2 CE2 doub Y N 321 TRP CD2 CE3 sing Y N 322 TRP NE1 CE2 sing Y N 323 TRP NE1 HE1 sing N N 324 TRP CE2 CZ2 sing Y N 325 TRP CE3 CZ3 doub Y N 326 TRP CE3 HE3 sing N N 327 TRP CZ2 CH2 doub Y N 328 TRP CZ2 HZ2 sing N N 329 TRP CZ3 CH2 sing Y N 330 TRP CZ3 HZ3 sing N N 331 TRP CH2 HH2 sing N N 332 TRP OXT HXT sing N N 333 TYR N CA sing N N 334 TYR N H sing N N 335 TYR N H2 sing N N 336 TYR CA C sing N N 337 TYR CA CB sing N N 338 TYR CA HA sing N N 339 TYR C O doub N N 340 TYR C OXT sing N N 341 TYR CB CG sing N N 342 TYR CB HB2 sing N N 343 TYR CB HB3 sing N N 344 TYR CG CD1 doub Y N 345 TYR CG CD2 sing Y N 346 TYR CD1 CE1 sing Y N 347 TYR CD1 HD1 sing N N 348 TYR CD2 CE2 doub Y N 349 TYR CD2 HD2 sing N N 350 TYR CE1 CZ doub Y N 351 TYR CE1 HE1 sing N N 352 TYR CE2 CZ sing Y N 353 TYR CE2 HE2 sing N N 354 TYR CZ OH sing N N 355 TYR OH HH sing N N 356 TYR OXT HXT sing N N 357 VAL N CA sing N N 358 VAL N H sing N N 359 VAL N H2 sing N N 360 VAL CA C sing N N 361 VAL CA CB sing N N 362 VAL CA HA sing N N 363 VAL C O doub N N 364 VAL C OXT sing N N 365 VAL CB CG1 sing N N 366 VAL CB CG2 sing N N 367 VAL CB HB sing N N 368 VAL CG1 HG11 sing N N 369 VAL CG1 HG12 sing N N 370 VAL CG1 HG13 sing N N 371 VAL CG2 HG21 sing N N 372 VAL CG2 HG22 sing N N 373 VAL CG2 HG23 sing N N 374 VAL OXT HXT sing N N 375 # _atom_sites.entry_id 4DDP _atom_sites.fract_transf_matrix[1][1] 0.012385 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.005383 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.029795 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.014584 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_