HEADER TRANSPORT PROTEIN 22-JAN-12 4DEW TITLE CRYSTAL STRUCTURE OF THE WILD TYPE TTR BINDING LUTEOLIN (TTRWT:LUT) COMPND MOL_ID: 1; COMPND 2 MOLECULE: TRANSTHYRETIN; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: ATTR, PREALBUMIN, TBPA; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: PALB, TTR; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID KEYWDS BETA SANDWICH, AMYLOIDOSIS, TRANSPORT PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR D.B.B.TRIVELLA,I.POLIKARPOV REVDAT 2 13-SEP-23 4DEW 1 REMARK REVDAT 1 21-NOV-12 4DEW 0 JRNL AUTH D.B.TRIVELLA,C.V.DOS REIS,L.M.LIMA,D.FOGUEL,I.POLIKARPOV JRNL TITL FLAVONOID INTERACTIONS WITH HUMAN TRANSTHYRETIN: COMBINED JRNL TITL 2 STRUCTURAL AND THERMODYNAMIC ANALYSIS. JRNL REF J.STRUCT.BIOL. V. 180 143 2012 JRNL REFN ISSN 1047-8477 JRNL PMID 22842046 JRNL DOI 10.1016/J.JSB.2012.07.008 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.6_289 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 26.01 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.4 REMARK 3 NUMBER OF REFLECTIONS : 19231 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.184 REMARK 3 R VALUE (WORKING SET) : 0.184 REMARK 3 FREE R VALUE : 0.199 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.130 REMARK 3 FREE R VALUE TEST SET COUNT : 987 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 26.0096 - 3.6307 0.99 2796 140 0.1782 0.1811 REMARK 3 2 3.6307 - 2.8830 1.00 2649 149 0.1741 0.1875 REMARK 3 3 2.8830 - 2.5189 1.00 2653 144 0.1860 0.2271 REMARK 3 4 2.5189 - 2.2888 1.00 2596 160 0.1933 0.2080 REMARK 3 5 2.2888 - 2.1248 1.00 2584 159 0.1779 0.2012 REMARK 3 6 2.1248 - 1.9996 0.98 2580 120 0.1902 0.2045 REMARK 3 7 1.9996 - 1.8990 0.92 2386 115 0.2144 0.2396 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : 0.40 REMARK 3 B_SOL : 60.00 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.180 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 18.200 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 28.10 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.00000 REMARK 3 B22 (A**2) : 0.00000 REMARK 3 B33 (A**2) : 0.00000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.036 1890 REMARK 3 ANGLE : 1.624 2591 REMARK 3 CHIRALITY : 0.178 290 REMARK 3 PLANARITY : 0.011 327 REMARK 3 DIHEDRAL : 17.754 646 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 1 REMARK 3 NCS GROUP : 1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: CHAIN A AND (RESSEQ 10:98 OR RESSEQ REMARK 3 104:123 ) REMARK 3 SELECTION : CHAIN B AND (RESSEQ 10:98 OR RESSEQ REMARK 3 104:123 ) REMARK 3 ATOM PAIRS NUMBER : 838 REMARK 3 RMSD : 0.901 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4DEW COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 24-JAN-12. REMARK 100 THE DEPOSITION ID IS D_1000070242. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : MAR-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : LNLS REMARK 200 BEAMLINE : W01B-MX2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.4586 REMARK 200 MONOCHROMATOR : DOUBLE FLAT CRYSTAL SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 19276 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.899 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.6 REMARK 200 DATA REDUNDANCY : 3.900 REMARK 200 R MERGE (I) : 0.07700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 8.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.97 REMARK 200 COMPLETENESS FOR SHELL (%) : 90.2 REMARK 200 DATA REDUNDANCY IN SHELL : 3.50 REMARK 200 R MERGE FOR SHELL (I) : 0.38000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 3CFM REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 34.44 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.88 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M CALCIUM CHLORIDE, 0.1 M HEPES, REMARK 280 PH 7.5, 28% PEG400, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 21.63200 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 42.39100 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 21.63200 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 42.39100 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6110 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18940 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -47.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 43.26400 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 84.78200 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 C5 LU2 A 201 LIES ON A SPECIAL POSITION. REMARK 375 O6 LU2 A 201 LIES ON A SPECIAL POSITION. REMARK 375 C9 LU2 A 201 LIES ON A SPECIAL POSITION. REMARK 375 C5 LU2 B 201 LIES ON A SPECIAL POSITION. REMARK 375 O6 LU2 B 201 LIES ON A SPECIAL POSITION. REMARK 375 C9 LU2 B 201 LIES ON A SPECIAL POSITION. REMARK 375 C10 LU2 B 201 LIES ON A SPECIAL POSITION. REMARK 375 C13 LU2 B 201 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 330 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 316 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 324 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 343 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -19 REMARK 465 ALA A -18 REMARK 465 SER A -17 REMARK 465 HIS A -16 REMARK 465 ARG A -15 REMARK 465 LEU A -14 REMARK 465 LEU A -13 REMARK 465 LEU A -12 REMARK 465 LEU A -11 REMARK 465 CYS A -10 REMARK 465 LEU A -9 REMARK 465 ALA A -8 REMARK 465 GLY A -7 REMARK 465 LEU A -6 REMARK 465 VAL A -5 REMARK 465 PHE A -4 REMARK 465 VAL A -3 REMARK 465 SER A -2 REMARK 465 GLU A -1 REMARK 465 ALA A 0 REMARK 465 GLY A 1 REMARK 465 PRO A 2 REMARK 465 THR A 3 REMARK 465 GLY A 4 REMARK 465 THR A 5 REMARK 465 GLY A 6 REMARK 465 GLU A 7 REMARK 465 SER A 8 REMARK 465 LYS A 9 REMARK 465 LYS A 126 REMARK 465 GLU A 127 REMARK 465 MET B -19 REMARK 465 ALA B -18 REMARK 465 SER B -17 REMARK 465 HIS B -16 REMARK 465 ARG B -15 REMARK 465 LEU B -14 REMARK 465 LEU B -13 REMARK 465 LEU B -12 REMARK 465 LEU B -11 REMARK 465 CYS B -10 REMARK 465 LEU B -9 REMARK 465 ALA B -8 REMARK 465 GLY B -7 REMARK 465 LEU B -6 REMARK 465 VAL B -5 REMARK 465 PHE B -4 REMARK 465 VAL B -3 REMARK 465 SER B -2 REMARK 465 GLU B -1 REMARK 465 ALA B 0 REMARK 465 GLY B 1 REMARK 465 PRO B 2 REMARK 465 THR B 3 REMARK 465 GLY B 4 REMARK 465 THR B 5 REMARK 465 GLY B 6 REMARK 465 GLU B 7 REMARK 465 SER B 8 REMARK 465 LYS B 9 REMARK 465 SER B 100 REMARK 465 GLY B 101 REMARK 465 PRO B 125 REMARK 465 LYS B 126 REMARK 465 GLU B 127 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 ARG A 104 CD NE CZ NH1 NH2 REMARK 480 GLU B 51 CD OE1 OE2 REMARK 480 ARG B 104 CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 366 O HOH B 354 1.45 REMARK 500 NH2 ARG A 21 O HOH A 360 1.77 REMARK 500 SG CYS B 10 O HOH B 332 1.94 REMARK 500 OE2 GLU B 92 O HOH B 323 2.08 REMARK 500 OE1 GLU B 63 O HOH B 326 2.08 REMARK 500 OH TYR B 116 O HOH B 306 2.11 REMARK 500 CB CYS B 10 O HOH B 332 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O5 LU2 A 201 O HOH A 309 2665 0.73 REMARK 500 O HOH A 341 O HOH A 344 4456 1.86 REMARK 500 O HOH A 337 O HOH A 348 4456 1.95 REMARK 500 C12 LU2 A 201 O HOH A 309 2665 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASN B 98 CA - C - N ANGL. DEV. = -15.5 DEGREES REMARK 500 ASN B 98 O - C - N ANGL. DEV. = 14.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP B 39 0.05 81.68 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE LU2 A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE LU2 B 201 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3KGU RELATED DB: PDB REMARK 900 RELATED ID: 4DER RELATED DB: PDB REMARK 900 RELATED ID: 4DES RELATED DB: PDB REMARK 900 RELATED ID: 4DET RELATED DB: PDB REMARK 900 RELATED ID: 4DEU RELATED DB: PDB DBREF 4DEW A -19 127 UNP P02766 TTHY_HUMAN 1 147 DBREF 4DEW B -19 127 UNP P02766 TTHY_HUMAN 1 147 SEQRES 1 A 147 MET ALA SER HIS ARG LEU LEU LEU LEU CYS LEU ALA GLY SEQRES 2 A 147 LEU VAL PHE VAL SER GLU ALA GLY PRO THR GLY THR GLY SEQRES 3 A 147 GLU SER LYS CYS PRO LEU MET VAL LYS VAL LEU ASP ALA SEQRES 4 A 147 VAL ARG GLY SER PRO ALA ILE ASN VAL ALA VAL HIS VAL SEQRES 5 A 147 PHE ARG LYS ALA ALA ASP ASP THR TRP GLU PRO PHE ALA SEQRES 6 A 147 SER GLY LYS THR SER GLU SER GLY GLU LEU HIS GLY LEU SEQRES 7 A 147 THR THR GLU GLU GLU PHE VAL GLU GLY ILE TYR LYS VAL SEQRES 8 A 147 GLU ILE ASP THR LYS SER TYR TRP LYS ALA LEU GLY ILE SEQRES 9 A 147 SER PRO PHE HIS GLU HIS ALA GLU VAL VAL PHE THR ALA SEQRES 10 A 147 ASN ASP SER GLY PRO ARG ARG TYR THR ILE ALA ALA LEU SEQRES 11 A 147 LEU SER PRO TYR SER TYR SER THR THR ALA VAL VAL THR SEQRES 12 A 147 ASN PRO LYS GLU SEQRES 1 B 147 MET ALA SER HIS ARG LEU LEU LEU LEU CYS LEU ALA GLY SEQRES 2 B 147 LEU VAL PHE VAL SER GLU ALA GLY PRO THR GLY THR GLY SEQRES 3 B 147 GLU SER LYS CYS PRO LEU MET VAL LYS VAL LEU ASP ALA SEQRES 4 B 147 VAL ARG GLY SER PRO ALA ILE ASN VAL ALA VAL HIS VAL SEQRES 5 B 147 PHE ARG LYS ALA ALA ASP ASP THR TRP GLU PRO PHE ALA SEQRES 6 B 147 SER GLY LYS THR SER GLU SER GLY GLU LEU HIS GLY LEU SEQRES 7 B 147 THR THR GLU GLU GLU PHE VAL GLU GLY ILE TYR LYS VAL SEQRES 8 B 147 GLU ILE ASP THR LYS SER TYR TRP LYS ALA LEU GLY ILE SEQRES 9 B 147 SER PRO PHE HIS GLU HIS ALA GLU VAL VAL PHE THR ALA SEQRES 10 B 147 ASN ASP SER GLY PRO ARG ARG TYR THR ILE ALA ALA LEU SEQRES 11 B 147 LEU SER PRO TYR SER TYR SER THR THR ALA VAL VAL THR SEQRES 12 B 147 ASN PRO LYS GLU HET LU2 A 201 21 HET LU2 B 201 21 HETNAM LU2 2-(3,4-DIHYDROXYPHENYL)-5,7-DIHYDROXY-4H-CHROMEN-4-ONE HETSYN LU2 LUTEOLIN FORMUL 3 LU2 2(C15 H10 O6) FORMUL 5 HOH *128(H2 O) HELIX 1 1 ASP A 74 LEU A 82 1 9 HELIX 2 2 ASP B 74 LEU B 82 1 9 SHEET 1 A 8 SER A 23 PRO A 24 0 SHEET 2 A 8 LEU A 12 ASP A 18 -1 N ASP A 18 O SER A 23 SHEET 3 A 8 ARG A 104 SER A 112 1 O LEU A 111 N LEU A 17 SHEET 4 A 8 SER A 115 THR A 123 -1 O THR A 123 N ARG A 104 SHEET 5 A 8 SER B 115 THR B 123 -1 O THR B 118 N TYR A 116 SHEET 6 A 8 ARG B 104 SER B 112 -1 N LEU B 110 O SER B 117 SHEET 7 A 8 LEU B 12 ASP B 18 1 N MET B 13 O ILE B 107 SHEET 8 A 8 SER B 23 PRO B 24 -1 O SER B 23 N ASP B 18 SHEET 1 B 8 GLU A 54 LEU A 55 0 SHEET 2 B 8 LEU A 12 ASP A 18 -1 N VAL A 14 O LEU A 55 SHEET 3 B 8 ARG A 104 SER A 112 1 O LEU A 111 N LEU A 17 SHEET 4 B 8 SER A 115 THR A 123 -1 O THR A 123 N ARG A 104 SHEET 5 B 8 SER B 115 THR B 123 -1 O THR B 118 N TYR A 116 SHEET 6 B 8 ARG B 104 SER B 112 -1 N LEU B 110 O SER B 117 SHEET 7 B 8 LEU B 12 ASP B 18 1 N MET B 13 O ILE B 107 SHEET 8 B 8 GLU B 54 LEU B 55 -1 O LEU B 55 N VAL B 14 SHEET 1 C 4 TRP A 41 LYS A 48 0 SHEET 2 C 4 ALA A 29 LYS A 35 -1 N VAL A 32 O ALA A 45 SHEET 3 C 4 GLY A 67 ILE A 73 -1 O GLU A 72 N HIS A 31 SHEET 4 C 4 ALA A 91 ALA A 97 -1 O ALA A 91 N ILE A 73 SHEET 1 D 4 TRP B 41 LYS B 48 0 SHEET 2 D 4 ALA B 29 LYS B 35 -1 N VAL B 32 O ALA B 45 SHEET 3 D 4 GLY B 67 ILE B 73 -1 O GLU B 72 N HIS B 31 SHEET 4 D 4 ALA B 91 ALA B 97 -1 O PHE B 95 N TYR B 69 SITE 1 AC1 8 LYS A 15 LEU A 17 ALA A 108 LEU A 110 SITE 2 AC1 8 SER A 117 THR A 119 HOH A 309 HOH A 330 SITE 1 AC2 8 LYS B 15 LEU B 17 LEU B 110 SER B 117 SITE 2 AC2 8 THR B 119 HOH B 314 HOH B 316 HOH B 342 CRYST1 43.264 84.782 65.087 90.00 90.00 90.00 P 21 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.023114 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011795 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015364 0.00000 MTRIX1 1 -0.993056 0.117216 0.010051 37.62000 1 MTRIX2 1 0.117232 0.993104 0.000933 -2.41735 1 MTRIX3 1 -0.009872 0.002105 -0.999949 97.71120 1