data_4DF6 # _entry.id 4DF6 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.281 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 4DF6 RCSB RCSB070252 WWPDB D_1000070252 # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 3NY4 _pdbx_database_related.details 'Crystal Structure of BlaC-K73A bound with Cefamandole' _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4DF6 _pdbx_database_status.recvd_initial_deposition_date 2012-01-23 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Hazra, S.' 1 'Blanchard, J.' 2 # _citation.id primary _citation.title 'NXL104 irreversibly inhibits the {beta}-lactamase from Mycobacterium tuberculosis.' _citation.journal_abbrev Biochemistry _citation.journal_volume 51 _citation.page_first 4551 _citation.page_last 4557 _citation.year 2012 _citation.journal_id_ASTM BICHAW _citation.country US _citation.journal_id_ISSN 0006-2960 _citation.journal_id_CSD 0033 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 22587688 _citation.pdbx_database_id_DOI 10.1021/bi300508r # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Xu, H.' 1 primary 'Hazra, S.' 2 primary 'Blanchard, J.S.' 3 # _cell.entry_id 4DF6 _cell.length_a 49.960 _cell.length_b 68.004 _cell.length_c 75.705 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4DF6 _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man Beta-lactamase 28272.721 1 3.5.2.6 ? ? ? 2 non-polymer syn 'PHOSPHATE ION' 94.971 2 ? ? ? ? 3 non-polymer syn '(2S,5R)-1-formyl-5-[(sulfooxy)amino]piperidine-2-carboxamide' 267.260 1 ? ? ? ? 4 water nat water 18.015 237 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name Penicillinase # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;DLADRFAELERRYDARLGVYVPATGTTAAIEYRADERFAFCSTFKAPLVAAVLHQNPLTHLDKLITYTSDDIRSISPVAQ QHVQTGMTIGQLCDAAIRYSDGTAANLLLADLGGPGGGTAAFTGYLRSLGDTVSRLDAEEPELNRDPPGDERDTTTPHAI ALVLQQLVLGNALPPDKRALLTDWMARNTTGAKRIRAGFPADWKVIDKTGTGDYGRANDIAVVWSPTGVPYVVAVMSDRA GGGYDAEPREALLAEAATCVAGVLA ; _entity_poly.pdbx_seq_one_letter_code_can ;DLADRFAELERRYDARLGVYVPATGTTAAIEYRADERFAFCSTFKAPLVAAVLHQNPLTHLDKLITYTSDDIRSISPVAQ QHVQTGMTIGQLCDAAIRYSDGTAANLLLADLGGPGGGTAAFTGYLRSLGDTVSRLDAEEPELNRDPPGDERDTTTPHAI ALVLQQLVLGNALPPDKRALLTDWMARNTTGAKRIRAGFPADWKVIDKTGTGDYGRANDIAVVWSPTGVPYVVAVMSDRA GGGYDAEPREALLAEAATCVAGVLA ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ASP n 1 2 LEU n 1 3 ALA n 1 4 ASP n 1 5 ARG n 1 6 PHE n 1 7 ALA n 1 8 GLU n 1 9 LEU n 1 10 GLU n 1 11 ARG n 1 12 ARG n 1 13 TYR n 1 14 ASP n 1 15 ALA n 1 16 ARG n 1 17 LEU n 1 18 GLY n 1 19 VAL n 1 20 TYR n 1 21 VAL n 1 22 PRO n 1 23 ALA n 1 24 THR n 1 25 GLY n 1 26 THR n 1 27 THR n 1 28 ALA n 1 29 ALA n 1 30 ILE n 1 31 GLU n 1 32 TYR n 1 33 ARG n 1 34 ALA n 1 35 ASP n 1 36 GLU n 1 37 ARG n 1 38 PHE n 1 39 ALA n 1 40 PHE n 1 41 CYS n 1 42 SER n 1 43 THR n 1 44 PHE n 1 45 LYS n 1 46 ALA n 1 47 PRO n 1 48 LEU n 1 49 VAL n 1 50 ALA n 1 51 ALA n 1 52 VAL n 1 53 LEU n 1 54 HIS n 1 55 GLN n 1 56 ASN n 1 57 PRO n 1 58 LEU n 1 59 THR n 1 60 HIS n 1 61 LEU n 1 62 ASP n 1 63 LYS n 1 64 LEU n 1 65 ILE n 1 66 THR n 1 67 TYR n 1 68 THR n 1 69 SER n 1 70 ASP n 1 71 ASP n 1 72 ILE n 1 73 ARG n 1 74 SER n 1 75 ILE n 1 76 SER n 1 77 PRO n 1 78 VAL n 1 79 ALA n 1 80 GLN n 1 81 GLN n 1 82 HIS n 1 83 VAL n 1 84 GLN n 1 85 THR n 1 86 GLY n 1 87 MET n 1 88 THR n 1 89 ILE n 1 90 GLY n 1 91 GLN n 1 92 LEU n 1 93 CYS n 1 94 ASP n 1 95 ALA n 1 96 ALA n 1 97 ILE n 1 98 ARG n 1 99 TYR n 1 100 SER n 1 101 ASP n 1 102 GLY n 1 103 THR n 1 104 ALA n 1 105 ALA n 1 106 ASN n 1 107 LEU n 1 108 LEU n 1 109 LEU n 1 110 ALA n 1 111 ASP n 1 112 LEU n 1 113 GLY n 1 114 GLY n 1 115 PRO n 1 116 GLY n 1 117 GLY n 1 118 GLY n 1 119 THR n 1 120 ALA n 1 121 ALA n 1 122 PHE n 1 123 THR n 1 124 GLY n 1 125 TYR n 1 126 LEU n 1 127 ARG n 1 128 SER n 1 129 LEU n 1 130 GLY n 1 131 ASP n 1 132 THR n 1 133 VAL n 1 134 SER n 1 135 ARG n 1 136 LEU n 1 137 ASP n 1 138 ALA n 1 139 GLU n 1 140 GLU n 1 141 PRO n 1 142 GLU n 1 143 LEU n 1 144 ASN n 1 145 ARG n 1 146 ASP n 1 147 PRO n 1 148 PRO n 1 149 GLY n 1 150 ASP n 1 151 GLU n 1 152 ARG n 1 153 ASP n 1 154 THR n 1 155 THR n 1 156 THR n 1 157 PRO n 1 158 HIS n 1 159 ALA n 1 160 ILE n 1 161 ALA n 1 162 LEU n 1 163 VAL n 1 164 LEU n 1 165 GLN n 1 166 GLN n 1 167 LEU n 1 168 VAL n 1 169 LEU n 1 170 GLY n 1 171 ASN n 1 172 ALA n 1 173 LEU n 1 174 PRO n 1 175 PRO n 1 176 ASP n 1 177 LYS n 1 178 ARG n 1 179 ALA n 1 180 LEU n 1 181 LEU n 1 182 THR n 1 183 ASP n 1 184 TRP n 1 185 MET n 1 186 ALA n 1 187 ARG n 1 188 ASN n 1 189 THR n 1 190 THR n 1 191 GLY n 1 192 ALA n 1 193 LYS n 1 194 ARG n 1 195 ILE n 1 196 ARG n 1 197 ALA n 1 198 GLY n 1 199 PHE n 1 200 PRO n 1 201 ALA n 1 202 ASP n 1 203 TRP n 1 204 LYS n 1 205 VAL n 1 206 ILE n 1 207 ASP n 1 208 LYS n 1 209 THR n 1 210 GLY n 1 211 THR n 1 212 GLY n 1 213 ASP n 1 214 TYR n 1 215 GLY n 1 216 ARG n 1 217 ALA n 1 218 ASN n 1 219 ASP n 1 220 ILE n 1 221 ALA n 1 222 VAL n 1 223 VAL n 1 224 TRP n 1 225 SER n 1 226 PRO n 1 227 THR n 1 228 GLY n 1 229 VAL n 1 230 PRO n 1 231 TYR n 1 232 VAL n 1 233 VAL n 1 234 ALA n 1 235 VAL n 1 236 MET n 1 237 SER n 1 238 ASP n 1 239 ARG n 1 240 ALA n 1 241 GLY n 1 242 GLY n 1 243 GLY n 1 244 TYR n 1 245 ASP n 1 246 ALA n 1 247 GLU n 1 248 PRO n 1 249 ARG n 1 250 GLU n 1 251 ALA n 1 252 LEU n 1 253 LEU n 1 254 ALA n 1 255 GLU n 1 256 ALA n 1 257 ALA n 1 258 THR n 1 259 CYS n 1 260 VAL n 1 261 ALA n 1 262 GLY n 1 263 VAL n 1 264 LEU n 1 265 ALA n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'blaA, blaC, MT2128, MTCY49.07c, Rv2068c' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Mycobacterium tuberculosis' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 1773 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ROSETTA2 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PET28A _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code BLAC_MYCTU _struct_ref.pdbx_db_accession P0C5C1 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;DLADRFAELERRYDARLGVYVPATGTTAAIEYRADERFAFCSTFKAPLVAAVLHQNPLTHLDKLITYTSDDIRSISPVAQ QHVQTGMTIGQLCDAAIRYSDGTAANLLLADLGGPGGGTAAFTGYLRSLGDTVSRLDAEEPELNRDPPGDERDTTTPHAI ALVLQQLVLGNALPPDKRALLTDWMARNTTGAKRIRAGFPADWKVIDKTGTGDYGRANDIAVVWSPTGVPYVVAVMSDRA GGGYDAEPREALLAEAATCVAGVLA ; _struct_ref.pdbx_align_begin 43 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4DF6 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 265 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P0C5C1 _struct_ref_seq.db_align_beg 43 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 307 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 29 _struct_ref_seq.pdbx_auth_seq_align_end 293 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NXL non-polymer . '(2S,5R)-1-formyl-5-[(sulfooxy)amino]piperidine-2-carboxamide' 'avibactam, bound form, NXL104, bound form' 'C7 H13 N3 O6 S' 267.260 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PO4 non-polymer . 'PHOSPHATE ION' ? 'O4 P -3' 94.971 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 4DF6 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.27 _exptl_crystal.density_percent_sol 45.92 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 283 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 4.1 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '0.1 M HEPES, 2 M ammonium phosphate monobasic, pH 4.1, VAPOR DIFFUSION, HANGING DROP, temperature 283K' # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.pdbx_collection_date 2011-11-11 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Si(111)' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.0 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'NSLS BEAMLINE X29A' _diffrn_source.pdbx_synchrotron_site NSLS _diffrn_source.pdbx_synchrotron_beamline X29A _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.0 # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 4DF6 _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 40.262 _reflns.d_resolution_high 2.29 _reflns.number_obs 11647 _reflns.number_all 11647 _reflns.percent_possible_obs 96.2 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 2.29 _reflns_shell.d_res_low ? _reflns_shell.percent_possible_all ? _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 4DF6 _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 11050 _refine.ls_number_reflns_all 11050 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F . _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 40.26 _refine.ls_d_res_high 2.29 _refine.ls_percent_reflns_obs 95.44 _refine.ls_R_factor_obs 0.17734 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.17307 _refine.ls_R_factor_R_free 0.26360 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.8 _refine.ls_number_reflns_R_free 557 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.952 _refine.correlation_coeff_Fo_to_Fc_free 0.895 _refine.B_iso_mean 28.652 _refine.aniso_B[1][1] -1.47 _refine.aniso_B[2][2] 1.38 _refine.aniso_B[3][3] 0.09 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.418 _refine.pdbx_overall_ESU_R_Free 0.280 _refine.overall_SU_ML 0.177 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 15.688 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1982 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 27 _refine_hist.number_atoms_solvent 237 _refine_hist.number_atoms_total 2246 _refine_hist.d_res_high 2.29 _refine_hist.d_res_low 40.26 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.018 0.022 ? 2029 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.631 1.972 ? 2772 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 6.775 5.000 ? 264 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 39.443 23.333 ? 87 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 12.935 15.000 ? 301 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 22.833 15.000 ? 18 'X-RAY DIFFRACTION' ? r_chiral_restr 0.105 0.200 ? 319 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.007 0.021 ? 1562 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 0.811 1.500 ? 1315 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 1.465 2.000 ? 2101 'X-RAY DIFFRACTION' ? r_scbond_it 2.612 3.000 ? 714 'X-RAY DIFFRACTION' ? r_scangle_it 4.071 4.500 ? 671 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_restr_ncs.dom_id _refine_ls_restr_ncs.pdbx_auth_asym_id _refine_ls_restr_ncs.pdbx_number _refine_ls_restr_ncs.rms_dev_position _refine_ls_restr_ncs.weight_position _refine_ls_restr_ncs.pdbx_type _refine_ls_restr_ncs.pdbx_ens_id _refine_ls_restr_ncs.pdbx_ordinal _refine_ls_restr_ncs.pdbx_refine_id _refine_ls_restr_ncs.ncs_model_details _refine_ls_restr_ncs.rms_dev_B_iso _refine_ls_restr_ncs.weight_B_iso 1 A 1982 0.00 0.50 'medium positional' 1 1 'X-RAY DIFFRACTION' ? ? ? 1 A 1982 0.00 2.00 'medium thermal' 1 2 'X-RAY DIFFRACTION' ? ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.290 _refine_ls_shell.d_res_low 2.350 _refine_ls_shell.number_reflns_R_work 784 _refine_ls_shell.R_factor_R_work 0.174 _refine_ls_shell.percent_reflns_obs 93.62 _refine_ls_shell.R_factor_R_free 0.247 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 38 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_obs ? # _pdbx_refine.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine.entry_id 4DF6 _pdbx_refine.R_factor_all_no_cutoff ? _pdbx_refine.R_factor_obs_no_cutoff ? _pdbx_refine.free_R_factor_no_cutoff ? _pdbx_refine.free_R_error_no_cutoff ? _pdbx_refine.free_R_val_test_set_size_perc_no_cutoff ? _pdbx_refine.free_R_val_test_set_ct_no_cutoff ? _pdbx_refine.R_factor_all_4sig_cutoff ? _pdbx_refine.R_factor_obs_4sig_cutoff ? _pdbx_refine.free_R_factor_4sig_cutoff ? _pdbx_refine.free_R_val_test_set_size_perc_4sig_cutoff ? _pdbx_refine.free_R_val_test_set_ct_4sig_cutoff ? _pdbx_refine.number_reflns_obs_4sig_cutoff ? # loop_ _struct_ncs_dom.id _struct_ncs_dom.details _struct_ncs_dom.pdbx_ens_id 1 A 1 2 A 1 # loop_ _struct_ncs_dom_lim.dom_id _struct_ncs_dom_lim.beg_auth_asym_id _struct_ncs_dom_lim.beg_auth_seq_id _struct_ncs_dom_lim.end_auth_asym_id _struct_ncs_dom_lim.end_auth_seq_id _struct_ncs_dom_lim.pdbx_component_id _struct_ncs_dom_lim.pdbx_refine_code _struct_ncs_dom_lim.beg_label_asym_id _struct_ncs_dom_lim.beg_label_comp_id _struct_ncs_dom_lim.beg_label_seq_id _struct_ncs_dom_lim.beg_label_alt_id _struct_ncs_dom_lim.end_label_asym_id _struct_ncs_dom_lim.end_label_comp_id _struct_ncs_dom_lim.end_label_seq_id _struct_ncs_dom_lim.end_label_alt_id _struct_ncs_dom_lim.pdbx_ens_id _struct_ncs_dom_lim.selection_details 1 A 29 A 293 1 4 ? ? ? ? ? ? ? ? 1 ? 2 A 29 A 293 1 4 ? ? ? ? ? ? ? ? 1 ? # _struct_ncs_ens.id 1 _struct_ncs_ens.details ? # _struct.entry_id 4DF6 _struct.title 'Crystal Structure of the inhibitor NXL104 Covalent Adduct with TB B-lactamase' _struct.pdbx_descriptor 'Beta-lactamase (E.C.3.5.2.6)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4DF6 _struct_keywords.pdbx_keywords 'HYDROLASE/HYDROLASE INHIBITOR' _struct_keywords.text 'penicillin binding protein, HYDROLASE-HYDROLASE INHIBITOR complex' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 3 ? E N N 4 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASP A 1 ? TYR A 13 ? ASP A 29 TYR A 41 1 ? 13 HELX_P HELX_P2 2 CYS A 41 ? THR A 43 ? CYS A 69 THR A 71 5 ? 3 HELX_P HELX_P3 3 PHE A 44 ? ASN A 56 ? PHE A 72 ASN A 84 1 ? 13 HELX_P HELX_P4 4 PRO A 57 ? ASP A 62 ? PRO A 85 ASP A 90 5 ? 6 HELX_P HELX_P5 5 THR A 68 ? ILE A 72 ? THR A 96 ILE A 100 5 ? 5 HELX_P HELX_P6 6 ILE A 89 ? TYR A 99 ? ILE A 117 TYR A 127 1 ? 11 HELX_P HELX_P7 7 ASP A 101 ? GLY A 113 ? ASP A 129 GLY A 141 1 ? 13 HELX_P HELX_P8 8 GLY A 114 ? GLY A 117 ? GLY A 142 GLY A 145 5 ? 4 HELX_P HELX_P9 9 GLY A 118 ? LEU A 129 ? GLY A 146 LEU A 157 1 ? 12 HELX_P HELX_P10 10 PRO A 141 ? ARG A 145 ? PRO A 169 ARG A 173 5 ? 5 HELX_P HELX_P11 11 THR A 156 ? LEU A 169 ? THR A 184 LEU A 197 1 ? 14 HELX_P HELX_P12 12 PRO A 174 ? ARG A 187 ? PRO A 202 ARG A 215 1 ? 14 HELX_P HELX_P13 13 ARG A 194 ? PHE A 199 ? ARG A 222 PHE A 227 1 ? 6 HELX_P HELX_P14 14 ARG A 239 ? GLY A 243 ? ARG A 267 GLY A 271 5 ? 5 HELX_P HELX_P15 15 ARG A 249 ? ALA A 265 ? ARG A 277 ALA A 293 1 ? 17 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_conn.id covale1 _struct_conn.conn_type_id covale _struct_conn.pdbx_leaving_atom_flag ? _struct_conn.pdbx_PDB_id ? _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_comp_id SER _struct_conn.ptnr1_label_seq_id 42 _struct_conn.ptnr1_label_atom_id OG _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id D _struct_conn.ptnr2_label_comp_id NXL _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_label_atom_id CAN _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id SER _struct_conn.ptnr1_auth_seq_id 70 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id NXL _struct_conn.ptnr2_auth_seq_id 703 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.details ? _struct_conn.pdbx_dist_value 0.869 _struct_conn.pdbx_value_order ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id GLU _struct_mon_prot_cis.label_seq_id 140 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id GLU _struct_mon_prot_cis.auth_seq_id 168 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 141 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 169 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -3.25 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 5 ? B ? 2 ? C ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel B 1 2 ? anti-parallel C 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ILE A 30 ? TYR A 32 ? ILE A 58 TYR A 60 A 2 ARG A 16 ? VAL A 21 ? ARG A 44 VAL A 49 A 3 PRO A 230 ? ASP A 238 ? PRO A 258 ASP A 266 A 4 ALA A 217 ? TRP A 224 ? ALA A 245 TRP A 252 A 5 LYS A 204 ? THR A 211 ? LYS A 232 THR A 239 B 1 PHE A 38 ? ALA A 39 ? PHE A 66 ALA A 67 B 2 THR A 154 ? THR A 155 ? THR A 182 THR A 183 C 1 LEU A 64 ? ILE A 65 ? LEU A 92 ILE A 93 C 2 MET A 87 ? THR A 88 ? MET A 115 THR A 116 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O ILE A 30 ? O ILE A 58 N VAL A 21 ? N VAL A 49 A 2 3 N ARG A 16 ? N ARG A 44 O ASP A 238 ? O ASP A 266 A 3 4 O TYR A 231 ? O TYR A 259 N VAL A 223 ? N VAL A 251 A 4 5 O ASN A 218 ? O ASN A 246 N GLY A 210 ? N GLY A 238 B 1 2 N PHE A 38 ? N PHE A 66 O THR A 155 ? O THR A 183 C 1 2 N ILE A 65 ? N ILE A 93 O MET A 87 ? O MET A 115 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 9 'BINDING SITE FOR RESIDUE PO4 A 701' AC2 Software ? ? ? ? 6 'BINDING SITE FOR RESIDUE PO4 A 702' AC3 Software ? ? ? ? 16 'BINDING SITE FOR RESIDUE NXL A 703' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 9 ARG A 37 ? ARG A 65 . ? 4_445 ? 2 AC1 9 ARG A 145 ? ARG A 173 . ? 1_555 ? 3 AC1 9 GLU A 151 ? GLU A 179 . ? 4_445 ? 4 AC1 9 ASP A 213 ? ASP A 241 . ? 1_555 ? 5 AC1 9 TYR A 244 ? TYR A 272 . ? 1_555 ? 6 AC1 9 NXL D . ? NXL A 703 . ? 1_555 ? 7 AC1 9 HOH E . ? HOH A 807 . ? 1_555 ? 8 AC1 9 HOH E . ? HOH A 811 . ? 1_555 ? 9 AC1 9 HOH E . ? HOH A 1030 . ? 1_555 ? 10 AC2 6 ARG A 33 ? ARG A 61 . ? 4_445 ? 11 AC2 6 GLU A 36 ? GLU A 64 . ? 4_445 ? 12 AC2 6 PRO A 141 ? PRO A 169 . ? 1_555 ? 13 AC2 6 GLU A 142 ? GLU A 170 . ? 1_555 ? 14 AC2 6 HOH E . ? HOH A 993 . ? 4_445 ? 15 AC2 6 HOH E . ? HOH A 995 . ? 4_445 ? 16 AC3 16 CYS A 41 ? CYS A 69 . ? 1_555 ? 17 AC3 16 SER A 42 ? SER A 70 . ? 1_555 ? 18 AC3 16 ILE A 75 ? ILE A 103 . ? 1_555 ? 19 AC3 16 SER A 100 ? SER A 128 . ? 1_555 ? 20 AC3 16 GLU A 140 ? GLU A 168 . ? 1_555 ? 21 AC3 16 ASN A 144 ? ASN A 172 . ? 1_555 ? 22 AC3 16 THR A 190 ? THR A 218 . ? 1_555 ? 23 AC3 16 THR A 209 ? THR A 237 . ? 1_555 ? 24 AC3 16 GLY A 210 ? GLY A 238 . ? 1_555 ? 25 AC3 16 THR A 211 ? THR A 239 . ? 1_555 ? 26 AC3 16 PO4 B . ? PO4 A 701 . ? 1_555 ? 27 AC3 16 HOH E . ? HOH A 1012 . ? 1_555 ? 28 AC3 16 HOH E . ? HOH A 1028 . ? 1_555 ? 29 AC3 16 HOH E . ? HOH A 1031 . ? 1_555 ? 30 AC3 16 HOH E . ? HOH A 1035 . ? 1_555 ? 31 AC3 16 HOH E . ? HOH A 1037 . ? 1_555 ? # _database_PDB_matrix.entry_id 4DF6 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 4DF6 _atom_sites.fract_transf_matrix[1][1] 0.020016 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.014705 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.013209 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ASP 1 29 29 ASP ASP A . n A 1 2 LEU 2 30 30 LEU LEU A . n A 1 3 ALA 3 31 31 ALA ALA A . n A 1 4 ASP 4 32 32 ASP ASP A . n A 1 5 ARG 5 33 33 ARG ARG A . n A 1 6 PHE 6 34 34 PHE PHE A . n A 1 7 ALA 7 35 35 ALA ALA A . n A 1 8 GLU 8 36 36 GLU GLU A . n A 1 9 LEU 9 37 37 LEU LEU A . n A 1 10 GLU 10 38 38 GLU GLU A . n A 1 11 ARG 11 39 39 ARG ARG A . n A 1 12 ARG 12 40 40 ARG ARG A . n A 1 13 TYR 13 41 41 TYR TYR A . n A 1 14 ASP 14 42 42 ASP ASP A . n A 1 15 ALA 15 43 43 ALA ALA A . n A 1 16 ARG 16 44 44 ARG ARG A . n A 1 17 LEU 17 45 45 LEU LEU A . n A 1 18 GLY 18 46 46 GLY GLY A . n A 1 19 VAL 19 47 47 VAL VAL A . n A 1 20 TYR 20 48 48 TYR TYR A . n A 1 21 VAL 21 49 49 VAL VAL A . n A 1 22 PRO 22 50 50 PRO PRO A . n A 1 23 ALA 23 51 51 ALA ALA A . n A 1 24 THR 24 52 52 THR THR A . n A 1 25 GLY 25 53 53 GLY GLY A . n A 1 26 THR 26 54 54 THR THR A . n A 1 27 THR 27 55 55 THR THR A . n A 1 28 ALA 28 56 56 ALA ALA A . n A 1 29 ALA 29 57 57 ALA ALA A . n A 1 30 ILE 30 58 58 ILE ILE A . n A 1 31 GLU 31 59 59 GLU GLU A . n A 1 32 TYR 32 60 60 TYR TYR A . n A 1 33 ARG 33 61 61 ARG ARG A . n A 1 34 ALA 34 62 62 ALA ALA A . n A 1 35 ASP 35 63 63 ASP ASP A . n A 1 36 GLU 36 64 64 GLU GLU A . n A 1 37 ARG 37 65 65 ARG ARG A . n A 1 38 PHE 38 66 66 PHE PHE A . n A 1 39 ALA 39 67 67 ALA ALA A . n A 1 40 PHE 40 68 68 PHE PHE A . n A 1 41 CYS 41 69 69 CYS CYS A . n A 1 42 SER 42 70 70 SER SER A . n A 1 43 THR 43 71 71 THR THR A . n A 1 44 PHE 44 72 72 PHE PHE A . n A 1 45 LYS 45 73 73 LYS LYS A . n A 1 46 ALA 46 74 74 ALA ALA A . n A 1 47 PRO 47 75 75 PRO PRO A . n A 1 48 LEU 48 76 76 LEU LEU A . n A 1 49 VAL 49 77 77 VAL VAL A . n A 1 50 ALA 50 78 78 ALA ALA A . n A 1 51 ALA 51 79 79 ALA ALA A . n A 1 52 VAL 52 80 80 VAL VAL A . n A 1 53 LEU 53 81 81 LEU LEU A . n A 1 54 HIS 54 82 82 HIS HIS A . n A 1 55 GLN 55 83 83 GLN GLN A . n A 1 56 ASN 56 84 84 ASN ASN A . n A 1 57 PRO 57 85 85 PRO PRO A . n A 1 58 LEU 58 86 86 LEU LEU A . n A 1 59 THR 59 87 87 THR THR A . n A 1 60 HIS 60 88 88 HIS HIS A . n A 1 61 LEU 61 89 89 LEU LEU A . n A 1 62 ASP 62 90 90 ASP ASP A . n A 1 63 LYS 63 91 91 LYS LYS A . n A 1 64 LEU 64 92 92 LEU LEU A . n A 1 65 ILE 65 93 93 ILE ILE A . n A 1 66 THR 66 94 94 THR THR A . n A 1 67 TYR 67 95 95 TYR TYR A . n A 1 68 THR 68 96 96 THR THR A . n A 1 69 SER 69 97 97 SER SER A . n A 1 70 ASP 70 98 98 ASP ASP A . n A 1 71 ASP 71 99 99 ASP ASP A . n A 1 72 ILE 72 100 100 ILE ILE A . n A 1 73 ARG 73 101 101 ARG ARG A . n A 1 74 SER 74 102 102 SER SER A . n A 1 75 ILE 75 103 103 ILE ILE A . n A 1 76 SER 76 104 104 SER SER A . n A 1 77 PRO 77 105 105 PRO PRO A . n A 1 78 VAL 78 106 106 VAL VAL A . n A 1 79 ALA 79 107 107 ALA ALA A . n A 1 80 GLN 80 108 108 GLN GLN A . n A 1 81 GLN 81 109 109 GLN GLN A . n A 1 82 HIS 82 110 110 HIS HIS A . n A 1 83 VAL 83 111 111 VAL VAL A . n A 1 84 GLN 84 112 112 GLN GLN A . n A 1 85 THR 85 113 113 THR THR A . n A 1 86 GLY 86 114 114 GLY GLY A . n A 1 87 MET 87 115 115 MET MET A . n A 1 88 THR 88 116 116 THR THR A . n A 1 89 ILE 89 117 117 ILE ILE A . n A 1 90 GLY 90 118 118 GLY GLY A . n A 1 91 GLN 91 119 119 GLN GLN A . n A 1 92 LEU 92 120 120 LEU LEU A . n A 1 93 CYS 93 121 121 CYS CYS A . n A 1 94 ASP 94 122 122 ASP ASP A . n A 1 95 ALA 95 123 123 ALA ALA A . n A 1 96 ALA 96 124 124 ALA ALA A . n A 1 97 ILE 97 125 125 ILE ILE A . n A 1 98 ARG 98 126 126 ARG ARG A . n A 1 99 TYR 99 127 127 TYR TYR A . n A 1 100 SER 100 128 128 SER SER A . n A 1 101 ASP 101 129 129 ASP ASP A . n A 1 102 GLY 102 130 130 GLY GLY A . n A 1 103 THR 103 131 131 THR THR A . n A 1 104 ALA 104 132 132 ALA ALA A . n A 1 105 ALA 105 133 133 ALA ALA A . n A 1 106 ASN 106 134 134 ASN ASN A . n A 1 107 LEU 107 135 135 LEU LEU A . n A 1 108 LEU 108 136 136 LEU LEU A . n A 1 109 LEU 109 137 137 LEU LEU A . n A 1 110 ALA 110 138 138 ALA ALA A . n A 1 111 ASP 111 139 139 ASP ASP A . n A 1 112 LEU 112 140 140 LEU LEU A . n A 1 113 GLY 113 141 141 GLY GLY A . n A 1 114 GLY 114 142 142 GLY GLY A . n A 1 115 PRO 115 143 143 PRO PRO A . n A 1 116 GLY 116 144 144 GLY GLY A . n A 1 117 GLY 117 145 145 GLY GLY A . n A 1 118 GLY 118 146 146 GLY GLY A . n A 1 119 THR 119 147 147 THR THR A . n A 1 120 ALA 120 148 148 ALA ALA A . n A 1 121 ALA 121 149 149 ALA ALA A . n A 1 122 PHE 122 150 150 PHE PHE A . n A 1 123 THR 123 151 151 THR THR A . n A 1 124 GLY 124 152 152 GLY GLY A . n A 1 125 TYR 125 153 153 TYR TYR A . n A 1 126 LEU 126 154 154 LEU LEU A . n A 1 127 ARG 127 155 155 ARG ARG A . n A 1 128 SER 128 156 156 SER SER A . n A 1 129 LEU 129 157 157 LEU LEU A . n A 1 130 GLY 130 158 158 GLY GLY A . n A 1 131 ASP 131 159 159 ASP ASP A . n A 1 132 THR 132 160 160 THR THR A . n A 1 133 VAL 133 161 161 VAL VAL A . n A 1 134 SER 134 162 162 SER SER A . n A 1 135 ARG 135 163 163 ARG ARG A . n A 1 136 LEU 136 164 164 LEU LEU A . n A 1 137 ASP 137 165 165 ASP ASP A . n A 1 138 ALA 138 166 166 ALA ALA A . n A 1 139 GLU 139 167 167 GLU GLU A . n A 1 140 GLU 140 168 168 GLU GLU A . n A 1 141 PRO 141 169 169 PRO PRO A . n A 1 142 GLU 142 170 170 GLU GLU A . n A 1 143 LEU 143 171 171 LEU LEU A . n A 1 144 ASN 144 172 172 ASN ASN A . n A 1 145 ARG 145 173 173 ARG ARG A . n A 1 146 ASP 146 174 174 ASP ASP A . n A 1 147 PRO 147 175 175 PRO PRO A . n A 1 148 PRO 148 176 176 PRO PRO A . n A 1 149 GLY 149 177 177 GLY GLY A . n A 1 150 ASP 150 178 178 ASP ASP A . n A 1 151 GLU 151 179 179 GLU GLU A . n A 1 152 ARG 152 180 180 ARG ARG A . n A 1 153 ASP 153 181 181 ASP ASP A . n A 1 154 THR 154 182 182 THR THR A . n A 1 155 THR 155 183 183 THR THR A . n A 1 156 THR 156 184 184 THR THR A . n A 1 157 PRO 157 185 185 PRO PRO A . n A 1 158 HIS 158 186 186 HIS HIS A . n A 1 159 ALA 159 187 187 ALA ALA A . n A 1 160 ILE 160 188 188 ILE ILE A . n A 1 161 ALA 161 189 189 ALA ALA A . n A 1 162 LEU 162 190 190 LEU LEU A . n A 1 163 VAL 163 191 191 VAL VAL A . n A 1 164 LEU 164 192 192 LEU LEU A . n A 1 165 GLN 165 193 193 GLN GLN A . n A 1 166 GLN 166 194 194 GLN GLN A . n A 1 167 LEU 167 195 195 LEU LEU A . n A 1 168 VAL 168 196 196 VAL VAL A . n A 1 169 LEU 169 197 197 LEU LEU A . n A 1 170 GLY 170 198 198 GLY GLY A . n A 1 171 ASN 171 199 199 ASN ASN A . n A 1 172 ALA 172 200 200 ALA ALA A . n A 1 173 LEU 173 201 201 LEU LEU A . n A 1 174 PRO 174 202 202 PRO PRO A . n A 1 175 PRO 175 203 203 PRO PRO A . n A 1 176 ASP 176 204 204 ASP ASP A . n A 1 177 LYS 177 205 205 LYS LYS A . n A 1 178 ARG 178 206 206 ARG ARG A . n A 1 179 ALA 179 207 207 ALA ALA A . n A 1 180 LEU 180 208 208 LEU LEU A . n A 1 181 LEU 181 209 209 LEU LEU A . n A 1 182 THR 182 210 210 THR THR A . n A 1 183 ASP 183 211 211 ASP ASP A . n A 1 184 TRP 184 212 212 TRP TRP A . n A 1 185 MET 185 213 213 MET MET A . n A 1 186 ALA 186 214 214 ALA ALA A . n A 1 187 ARG 187 215 215 ARG ARG A . n A 1 188 ASN 188 216 216 ASN ASN A . n A 1 189 THR 189 217 217 THR THR A . n A 1 190 THR 190 218 218 THR THR A . n A 1 191 GLY 191 219 219 GLY GLY A . n A 1 192 ALA 192 220 220 ALA ALA A . n A 1 193 LYS 193 221 221 LYS LYS A . n A 1 194 ARG 194 222 222 ARG ARG A . n A 1 195 ILE 195 223 223 ILE ILE A . n A 1 196 ARG 196 224 224 ARG ARG A . n A 1 197 ALA 197 225 225 ALA ALA A . n A 1 198 GLY 198 226 226 GLY GLY A . n A 1 199 PHE 199 227 227 PHE PHE A . n A 1 200 PRO 200 228 228 PRO PRO A . n A 1 201 ALA 201 229 229 ALA ALA A . n A 1 202 ASP 202 230 230 ASP ASP A . n A 1 203 TRP 203 231 231 TRP TRP A . n A 1 204 LYS 204 232 232 LYS LYS A . n A 1 205 VAL 205 233 233 VAL VAL A . n A 1 206 ILE 206 234 234 ILE ILE A . n A 1 207 ASP 207 235 235 ASP ASP A . n A 1 208 LYS 208 236 236 LYS LYS A . n A 1 209 THR 209 237 237 THR THR A . n A 1 210 GLY 210 238 238 GLY GLY A . n A 1 211 THR 211 239 239 THR THR A . n A 1 212 GLY 212 240 240 GLY GLY A . n A 1 213 ASP 213 241 241 ASP ASP A . n A 1 214 TYR 214 242 242 TYR TYR A . n A 1 215 GLY 215 243 243 GLY GLY A . n A 1 216 ARG 216 244 244 ARG ARG A . n A 1 217 ALA 217 245 245 ALA ALA A . n A 1 218 ASN 218 246 246 ASN ASN A . n A 1 219 ASP 219 247 247 ASP ASP A . n A 1 220 ILE 220 248 248 ILE ILE A . n A 1 221 ALA 221 249 249 ALA ALA A . n A 1 222 VAL 222 250 250 VAL VAL A . n A 1 223 VAL 223 251 251 VAL VAL A . n A 1 224 TRP 224 252 252 TRP TRP A . n A 1 225 SER 225 253 253 SER SER A . n A 1 226 PRO 226 254 254 PRO PRO A . n A 1 227 THR 227 255 255 THR THR A . n A 1 228 GLY 228 256 256 GLY GLY A . n A 1 229 VAL 229 257 257 VAL VAL A . n A 1 230 PRO 230 258 258 PRO PRO A . n A 1 231 TYR 231 259 259 TYR TYR A . n A 1 232 VAL 232 260 260 VAL VAL A . n A 1 233 VAL 233 261 261 VAL VAL A . n A 1 234 ALA 234 262 262 ALA ALA A . n A 1 235 VAL 235 263 263 VAL VAL A . n A 1 236 MET 236 264 264 MET MET A . n A 1 237 SER 237 265 265 SER SER A . n A 1 238 ASP 238 266 266 ASP ASP A . n A 1 239 ARG 239 267 267 ARG ARG A . n A 1 240 ALA 240 268 268 ALA ALA A . n A 1 241 GLY 241 269 269 GLY GLY A . n A 1 242 GLY 242 270 270 GLY GLY A . n A 1 243 GLY 243 271 271 GLY GLY A . n A 1 244 TYR 244 272 272 TYR TYR A . n A 1 245 ASP 245 273 273 ASP ASP A . n A 1 246 ALA 246 274 274 ALA ALA A . n A 1 247 GLU 247 275 275 GLU GLU A . n A 1 248 PRO 248 276 276 PRO PRO A . n A 1 249 ARG 249 277 277 ARG ARG A . n A 1 250 GLU 250 278 278 GLU GLU A . n A 1 251 ALA 251 279 279 ALA ALA A . n A 1 252 LEU 252 280 280 LEU LEU A . n A 1 253 LEU 253 281 281 LEU LEU A . n A 1 254 ALA 254 282 282 ALA ALA A . n A 1 255 GLU 255 283 283 GLU GLU A . n A 1 256 ALA 256 284 284 ALA ALA A . n A 1 257 ALA 257 285 285 ALA ALA A . n A 1 258 THR 258 286 286 THR THR A . n A 1 259 CYS 259 287 287 CYS CYS A . n A 1 260 VAL 260 288 288 VAL VAL A . n A 1 261 ALA 261 289 289 ALA ALA A . n A 1 262 GLY 262 290 290 GLY GLY A . n A 1 263 VAL 263 291 291 VAL VAL A . n A 1 264 LEU 264 292 292 LEU LEU A . n A 1 265 ALA 265 293 293 ALA ALA A . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2012-07-18 2 'Structure model' 1 1 2013-06-19 3 'Structure model' 1 2 2015-06-03 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Non-polymer description' # _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x -7.2843 _pdbx_refine_tls.origin_y -6.9233 _pdbx_refine_tls.origin_z -8.6345 _pdbx_refine_tls.T[1][1] 0.0188 _pdbx_refine_tls.T[2][2] 0.0141 _pdbx_refine_tls.T[3][3] 0.0486 _pdbx_refine_tls.T[1][2] 0.0092 _pdbx_refine_tls.T[1][3] 0.0110 _pdbx_refine_tls.T[2][3] 0.0121 _pdbx_refine_tls.L[1][1] 0.1742 _pdbx_refine_tls.L[2][2] 0.2278 _pdbx_refine_tls.L[3][3] 0.8606 _pdbx_refine_tls.L[1][2] -0.0257 _pdbx_refine_tls.L[1][3] 0.1044 _pdbx_refine_tls.L[2][3] -0.1017 _pdbx_refine_tls.S[1][1] 0.0055 _pdbx_refine_tls.S[1][2] -0.0100 _pdbx_refine_tls.S[1][3] -0.0016 _pdbx_refine_tls.S[2][1] -0.0070 _pdbx_refine_tls.S[2][2] 0.0312 _pdbx_refine_tls.S[2][3] -0.0238 _pdbx_refine_tls.S[3][1] -0.0478 _pdbx_refine_tls.S[3][2] -0.0820 _pdbx_refine_tls.S[3][3] -0.0367 # _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_auth_asym_id A _pdbx_refine_tls_group.beg_auth_seq_id 29 _pdbx_refine_tls_group.beg_label_asym_id ? _pdbx_refine_tls_group.beg_label_seq_id ? _pdbx_refine_tls_group.end_auth_asym_id A _pdbx_refine_tls_group.end_auth_seq_id 293 _pdbx_refine_tls_group.end_label_asym_id ? _pdbx_refine_tls_group.end_label_seq_id ? _pdbx_refine_tls_group.selection ? _pdbx_refine_tls_group.selection_details ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal HKL-2000 'data collection' . ? 1 AMoRE phasing . ? 2 REFMAC refinement 5.5.0102 ? 3 HKL-2000 'data scaling' . ? 4 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 SAR A NXL 703 ? ? O A HOH 1035 ? ? 0.49 2 1 SAR A NXL 703 ? ? O A HOH 1037 ? ? 0.74 3 1 OAG A NXL 703 ? ? O A HOH 1037 ? ? 0.83 4 1 O A HOH 1035 ? ? O A HOH 1037 ? ? 1.20 5 1 OAL A NXL 703 ? ? O A HOH 1035 ? ? 1.32 6 1 OAE A NXL 703 ? ? O A HOH 1035 ? ? 1.40 7 1 OAD A NXL 703 ? ? O A HOH 1035 ? ? 1.61 8 1 OAE A NXL 703 ? ? O A HOH 1037 ? ? 1.72 9 1 OG A SER 70 ? ? OAC A NXL 703 ? ? 1.72 10 1 O A HOH 1023 ? ? O A HOH 1024 ? ? 1.88 11 1 OAD A NXL 703 ? ? O A HOH 1037 ? ? 1.94 12 1 OG A SER 70 ? ? N A NXL 703 ? ? 1.95 13 1 OAG A NXL 703 ? ? O A HOH 1035 ? ? 1.99 14 1 OAL A NXL 703 ? ? O A HOH 1037 ? ? 2.02 15 1 O A HOH 813 ? ? O A HOH 1018 ? ? 2.12 16 1 O A HOH 928 ? ? O A HOH 989 ? ? 2.14 17 1 O A HOH 920 ? ? O A HOH 980 ? ? 2.15 # loop_ _pdbx_validate_symm_contact.id _pdbx_validate_symm_contact.PDB_model_num _pdbx_validate_symm_contact.auth_atom_id_1 _pdbx_validate_symm_contact.auth_asym_id_1 _pdbx_validate_symm_contact.auth_comp_id_1 _pdbx_validate_symm_contact.auth_seq_id_1 _pdbx_validate_symm_contact.PDB_ins_code_1 _pdbx_validate_symm_contact.label_alt_id_1 _pdbx_validate_symm_contact.site_symmetry_1 _pdbx_validate_symm_contact.auth_atom_id_2 _pdbx_validate_symm_contact.auth_asym_id_2 _pdbx_validate_symm_contact.auth_comp_id_2 _pdbx_validate_symm_contact.auth_seq_id_2 _pdbx_validate_symm_contact.PDB_ins_code_2 _pdbx_validate_symm_contact.label_alt_id_2 _pdbx_validate_symm_contact.site_symmetry_2 _pdbx_validate_symm_contact.dist 1 1 O A HOH 841 ? ? 1_555 O A HOH 885 ? ? 2_455 1.92 2 1 O2 A PO4 702 ? ? 1_555 O A HOH 995 ? ? 4_445 2.03 # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 CB _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 ASP _pdbx_validate_rmsd_angle.auth_seq_id_1 204 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 CG _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 ASP _pdbx_validate_rmsd_angle.auth_seq_id_2 204 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 OD1 _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 ASP _pdbx_validate_rmsd_angle.auth_seq_id_3 204 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 124.91 _pdbx_validate_rmsd_angle.angle_target_value 118.30 _pdbx_validate_rmsd_angle.angle_deviation 6.61 _pdbx_validate_rmsd_angle.angle_standard_deviation 0.90 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 THR A 52 ? ? -121.55 -160.40 2 1 CYS A 69 ? ? 46.95 -143.67 3 1 ARG A 222 ? ? -115.79 -123.23 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ARG 277 ? CG ? A ARG 249 CG 2 1 Y 1 A ARG 277 ? CD ? A ARG 249 CD 3 1 Y 1 A ARG 277 ? NE ? A ARG 249 NE 4 1 Y 1 A ARG 277 ? CZ ? A ARG 249 CZ 5 1 Y 1 A ARG 277 ? NH1 ? A ARG 249 NH1 6 1 Y 1 A ARG 277 ? NH2 ? A ARG 249 NH2 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'PHOSPHATE ION' PO4 3 '(2S,5R)-1-formyl-5-[(sulfooxy)amino]piperidine-2-carboxamide' NXL 4 water HOH # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PO4 1 701 701 PO4 PO4 A . C 2 PO4 1 702 702 PO4 PO4 A . D 3 NXL 1 703 703 NXL NXL A . E 4 HOH 1 801 801 HOH HOH A . E 4 HOH 2 802 802 HOH HOH A . E 4 HOH 3 803 803 HOH HOH A . E 4 HOH 4 804 804 HOH HOH A . E 4 HOH 5 805 805 HOH HOH A . E 4 HOH 6 806 806 HOH HOH A . E 4 HOH 7 807 807 HOH HOH A . E 4 HOH 8 808 808 HOH HOH A . E 4 HOH 9 809 809 HOH HOH A . E 4 HOH 10 810 810 HOH HOH A . E 4 HOH 11 811 811 HOH HOH A . E 4 HOH 12 812 812 HOH HOH A . E 4 HOH 13 813 813 HOH HOH A . E 4 HOH 14 814 814 HOH HOH A . E 4 HOH 15 815 815 HOH HOH A . E 4 HOH 16 816 816 HOH HOH A . E 4 HOH 17 817 817 HOH HOH A . E 4 HOH 18 818 818 HOH HOH A . E 4 HOH 19 819 819 HOH HOH A . E 4 HOH 20 820 820 HOH HOH A . E 4 HOH 21 821 821 HOH HOH A . E 4 HOH 22 822 822 HOH HOH A . E 4 HOH 23 823 823 HOH HOH A . E 4 HOH 24 824 824 HOH HOH A . E 4 HOH 25 825 825 HOH HOH A . E 4 HOH 26 826 826 HOH HOH A . E 4 HOH 27 827 827 HOH HOH A . E 4 HOH 28 828 828 HOH HOH A . E 4 HOH 29 829 829 HOH HOH A . E 4 HOH 30 830 830 HOH HOH A . E 4 HOH 31 831 831 HOH HOH A . E 4 HOH 32 832 832 HOH HOH A . E 4 HOH 33 833 833 HOH HOH A . E 4 HOH 34 834 834 HOH HOH A . E 4 HOH 35 835 835 HOH HOH A . E 4 HOH 36 836 836 HOH HOH A . E 4 HOH 37 837 837 HOH HOH A . E 4 HOH 38 838 838 HOH HOH A . E 4 HOH 39 839 839 HOH HOH A . E 4 HOH 40 840 840 HOH HOH A . E 4 HOH 41 841 841 HOH HOH A . E 4 HOH 42 842 842 HOH HOH A . E 4 HOH 43 843 843 HOH HOH A . E 4 HOH 44 844 844 HOH HOH A . E 4 HOH 45 845 845 HOH HOH A . E 4 HOH 46 846 846 HOH HOH A . E 4 HOH 47 847 847 HOH HOH A . E 4 HOH 48 848 848 HOH HOH A . E 4 HOH 49 849 849 HOH HOH A . E 4 HOH 50 850 850 HOH HOH A . E 4 HOH 51 851 851 HOH HOH A . E 4 HOH 52 852 852 HOH HOH A . E 4 HOH 53 853 853 HOH HOH A . E 4 HOH 54 854 854 HOH HOH A . E 4 HOH 55 855 855 HOH HOH A . E 4 HOH 56 856 856 HOH HOH A . E 4 HOH 57 857 857 HOH HOH A . E 4 HOH 58 858 858 HOH HOH A . E 4 HOH 59 859 859 HOH HOH A . E 4 HOH 60 860 860 HOH HOH A . E 4 HOH 61 861 861 HOH HOH A . E 4 HOH 62 862 862 HOH HOH A . E 4 HOH 63 863 863 HOH HOH A . E 4 HOH 64 864 864 HOH HOH A . E 4 HOH 65 865 865 HOH HOH A . E 4 HOH 66 866 866 HOH HOH A . E 4 HOH 67 867 867 HOH HOH A . E 4 HOH 68 868 868 HOH HOH A . E 4 HOH 69 869 869 HOH HOH A . E 4 HOH 70 870 870 HOH HOH A . E 4 HOH 71 871 871 HOH HOH A . E 4 HOH 72 872 872 HOH HOH A . E 4 HOH 73 873 873 HOH HOH A . E 4 HOH 74 874 874 HOH HOH A . E 4 HOH 75 875 875 HOH HOH A . E 4 HOH 76 876 876 HOH HOH A . E 4 HOH 77 877 877 HOH HOH A . E 4 HOH 78 878 878 HOH HOH A . E 4 HOH 79 879 879 HOH HOH A . E 4 HOH 80 880 880 HOH HOH A . E 4 HOH 81 881 881 HOH HOH A . E 4 HOH 82 882 882 HOH HOH A . E 4 HOH 83 883 883 HOH HOH A . E 4 HOH 84 884 884 HOH HOH A . E 4 HOH 85 885 885 HOH HOH A . E 4 HOH 86 886 886 HOH HOH A . E 4 HOH 87 887 887 HOH HOH A . E 4 HOH 88 888 888 HOH HOH A . E 4 HOH 89 889 889 HOH HOH A . E 4 HOH 90 890 890 HOH HOH A . E 4 HOH 91 891 891 HOH HOH A . E 4 HOH 92 892 892 HOH HOH A . E 4 HOH 93 893 893 HOH HOH A . E 4 HOH 94 894 894 HOH HOH A . E 4 HOH 95 895 895 HOH HOH A . E 4 HOH 96 896 896 HOH HOH A . E 4 HOH 97 897 897 HOH HOH A . E 4 HOH 98 898 898 HOH HOH A . E 4 HOH 99 899 899 HOH HOH A . E 4 HOH 100 900 900 HOH HOH A . E 4 HOH 101 901 901 HOH HOH A . E 4 HOH 102 902 902 HOH HOH A . E 4 HOH 103 903 903 HOH HOH A . E 4 HOH 104 904 904 HOH HOH A . E 4 HOH 105 905 905 HOH HOH A . E 4 HOH 106 906 906 HOH HOH A . E 4 HOH 107 907 907 HOH HOH A . E 4 HOH 108 908 908 HOH HOH A . E 4 HOH 109 909 909 HOH HOH A . E 4 HOH 110 910 910 HOH HOH A . E 4 HOH 111 911 911 HOH HOH A . E 4 HOH 112 912 912 HOH HOH A . E 4 HOH 113 913 913 HOH HOH A . E 4 HOH 114 914 914 HOH HOH A . E 4 HOH 115 915 915 HOH HOH A . E 4 HOH 116 916 916 HOH HOH A . E 4 HOH 117 917 917 HOH HOH A . E 4 HOH 118 918 918 HOH HOH A . E 4 HOH 119 919 919 HOH HOH A . E 4 HOH 120 920 920 HOH HOH A . E 4 HOH 121 921 921 HOH HOH A . E 4 HOH 122 922 922 HOH HOH A . E 4 HOH 123 923 923 HOH HOH A . E 4 HOH 124 924 924 HOH HOH A . E 4 HOH 125 925 925 HOH HOH A . E 4 HOH 126 926 926 HOH HOH A . E 4 HOH 127 927 927 HOH HOH A . E 4 HOH 128 928 928 HOH HOH A . E 4 HOH 129 929 929 HOH HOH A . E 4 HOH 130 930 930 HOH HOH A . E 4 HOH 131 931 931 HOH HOH A . E 4 HOH 132 932 932 HOH HOH A . E 4 HOH 133 933 933 HOH HOH A . E 4 HOH 134 934 934 HOH HOH A . E 4 HOH 135 935 935 HOH HOH A . E 4 HOH 136 936 936 HOH HOH A . E 4 HOH 137 937 937 HOH HOH A . E 4 HOH 138 938 938 HOH HOH A . E 4 HOH 139 939 939 HOH HOH A . E 4 HOH 140 940 940 HOH HOH A . E 4 HOH 141 941 941 HOH HOH A . E 4 HOH 142 942 942 HOH HOH A . E 4 HOH 143 943 943 HOH HOH A . E 4 HOH 144 944 944 HOH HOH A . E 4 HOH 145 945 945 HOH HOH A . E 4 HOH 146 946 946 HOH HOH A . E 4 HOH 147 947 947 HOH HOH A . E 4 HOH 148 948 948 HOH HOH A . E 4 HOH 149 949 949 HOH HOH A . E 4 HOH 150 950 950 HOH HOH A . E 4 HOH 151 951 951 HOH HOH A . E 4 HOH 152 952 952 HOH HOH A . E 4 HOH 153 953 953 HOH HOH A . E 4 HOH 154 954 954 HOH HOH A . E 4 HOH 155 955 955 HOH HOH A . E 4 HOH 156 956 956 HOH HOH A . E 4 HOH 157 957 957 HOH HOH A . E 4 HOH 158 958 958 HOH HOH A . E 4 HOH 159 959 959 HOH HOH A . E 4 HOH 160 960 960 HOH HOH A . E 4 HOH 161 961 961 HOH HOH A . E 4 HOH 162 962 962 HOH HOH A . E 4 HOH 163 963 963 HOH HOH A . E 4 HOH 164 964 964 HOH HOH A . E 4 HOH 165 965 965 HOH HOH A . E 4 HOH 166 966 966 HOH HOH A . E 4 HOH 167 967 967 HOH HOH A . E 4 HOH 168 968 968 HOH HOH A . E 4 HOH 169 969 969 HOH HOH A . E 4 HOH 170 970 970 HOH HOH A . E 4 HOH 171 971 971 HOH HOH A . E 4 HOH 172 972 972 HOH HOH A . E 4 HOH 173 973 973 HOH HOH A . E 4 HOH 174 974 974 HOH HOH A . E 4 HOH 175 975 975 HOH HOH A . E 4 HOH 176 976 976 HOH HOH A . E 4 HOH 177 977 977 HOH HOH A . E 4 HOH 178 978 978 HOH HOH A . E 4 HOH 179 979 979 HOH HOH A . E 4 HOH 180 980 980 HOH HOH A . E 4 HOH 181 981 981 HOH HOH A . E 4 HOH 182 982 982 HOH HOH A . E 4 HOH 183 983 983 HOH HOH A . E 4 HOH 184 984 984 HOH HOH A . E 4 HOH 185 985 985 HOH HOH A . E 4 HOH 186 986 986 HOH HOH A . E 4 HOH 187 987 987 HOH HOH A . E 4 HOH 188 988 988 HOH HOH A . E 4 HOH 189 989 989 HOH HOH A . E 4 HOH 190 990 990 HOH HOH A . E 4 HOH 191 991 991 HOH HOH A . E 4 HOH 192 992 992 HOH HOH A . E 4 HOH 193 993 993 HOH HOH A . E 4 HOH 194 994 994 HOH HOH A . E 4 HOH 195 995 995 HOH HOH A . E 4 HOH 196 996 996 HOH HOH A . E 4 HOH 197 997 997 HOH HOH A . E 4 HOH 198 998 998 HOH HOH A . E 4 HOH 199 999 999 HOH HOH A . E 4 HOH 200 1000 1000 HOH HOH A . E 4 HOH 201 1001 1001 HOH HOH A . E 4 HOH 202 1002 1002 HOH HOH A . E 4 HOH 203 1003 1003 HOH HOH A . E 4 HOH 204 1004 1004 HOH HOH A . E 4 HOH 205 1005 1005 HOH HOH A . E 4 HOH 206 1006 1006 HOH HOH A . E 4 HOH 207 1007 1007 HOH HOH A . E 4 HOH 208 1008 1008 HOH HOH A . E 4 HOH 209 1009 1009 HOH HOH A . E 4 HOH 210 1010 1010 HOH HOH A . E 4 HOH 211 1011 1011 HOH HOH A . E 4 HOH 212 1012 1012 HOH HOH A . E 4 HOH 213 1013 1013 HOH HOH A . E 4 HOH 214 1014 1014 HOH HOH A . E 4 HOH 215 1015 1015 HOH HOH A . E 4 HOH 216 1016 1016 HOH HOH A . E 4 HOH 217 1017 1017 HOH HOH A . E 4 HOH 218 1018 1018 HOH HOH A . E 4 HOH 219 1019 1019 HOH HOH A . E 4 HOH 220 1020 1020 HOH HOH A . E 4 HOH 221 1021 1021 HOH HOH A . E 4 HOH 222 1022 1022 HOH HOH A . E 4 HOH 223 1023 1023 HOH HOH A . E 4 HOH 224 1024 1024 HOH HOH A . E 4 HOH 225 1025 1025 HOH HOH A . E 4 HOH 226 1026 1026 HOH HOH A . E 4 HOH 227 1027 1027 HOH HOH A . E 4 HOH 228 1028 1028 HOH HOH A . E 4 HOH 229 1029 1029 HOH HOH A . E 4 HOH 230 1030 1030 HOH HOH A . E 4 HOH 231 1031 1031 HOH HOH A . E 4 HOH 232 1032 1032 HOH HOH A . E 4 HOH 233 1033 1033 HOH HOH A . E 4 HOH 234 1034 1034 HOH HOH A . E 4 HOH 235 1035 1035 HOH HOH A . E 4 HOH 236 1036 1036 HOH HOH A . E 4 HOH 237 1037 1037 HOH HOH A . #