HEADER HYDROLASE/DNA BINDING PROTEIN 23-JAN-12 4DFC TITLE CORE UVRA/TRCF COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: TRANSCRIPTION-REPAIR-COUPLING FACTOR; COMPND 3 CHAIN: A, C; COMPND 4 FRAGMENT: TRCF-D2 DOMAIN, UNP RESIDUES 127-213; COMPND 5 SYNONYM: TRCF, ATP-DEPENDENT HELICASE MFD; COMPND 6 EC: 3.6.4.-; COMPND 7 ENGINEERED: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: UVRABC SYSTEM PROTEIN A; COMPND 10 CHAIN: B, D; COMPND 11 FRAGMENT: UNP RESIDUES 131-250; COMPND 12 SYNONYM: UVRA PROTEIN, EXCINUCLEASE ABC SUBUNIT A; COMPND 13 EC: 3.6.1.3; COMPND 14 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 83333; SOURCE 4 STRAIN: K12; SOURCE 5 GENE: B1114, ESCHERICHIA COLI, JW1100, MFD; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: ROSETTA2(DE3)PLYSS; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET28A DERIVATIVE; SOURCE 11 MOL_ID: 2; SOURCE 12 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 13 ORGANISM_TAXID: 83333; SOURCE 14 STRAIN: K12; SOURCE 15 GENE: B4058, DINE, ESCHERICHIA COLI, JW4019, UVRA; SOURCE 16 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 17 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 18 EXPRESSION_SYSTEM_STRAIN: ROSETTA2(DE3)PLYSS; SOURCE 19 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 20 EXPRESSION_SYSTEM_PLASMID: PET28A DERIVATIVE KEYWDS ALPHA/BETA DOMAINS, DNA REPAIR, ATP BINDING, DNA BINDING, NUCLEOTIDE KEYWDS 2 EXCISION REPAIR, HYDROLASE-DNA BINDING PROTEIN COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR A.M.DEACONESCU,N.GRIGORIEFF REVDAT 2 13-SEP-23 4DFC 1 SEQADV REVDAT 1 02-MAY-12 4DFC 0 JRNL AUTH A.M.DEACONESCU,A.SEVOSTYANOVA,I.ARTSIMOVITCH,N.GRIGORIEFF JRNL TITL NUCLEOTIDE EXCISION REPAIR (NER) MACHINERY RECRUITMENT BY JRNL TITL 2 THE TRANSCRIPTION-REPAIR COUPLING FACTOR INVOLVES UNMASKING JRNL TITL 3 OF A CONSERVED INTRAMOLECULAR INTERFACE. JRNL REF PROC.NATL.ACAD.SCI.USA V. 109 3353 2012 JRNL REFN ISSN 0027-8424 JRNL PMID 22331906 JRNL DOI 10.1073/PNAS.1115105109 REMARK 2 REMARK 2 RESOLUTION. 2.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.7.1_743) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.98 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 3 NUMBER OF REFLECTIONS : 24708 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.240 REMARK 3 R VALUE (WORKING SET) : 0.238 REMARK 3 FREE R VALUE : 0.282 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.020 REMARK 3 FREE R VALUE TEST SET COUNT : 1240 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 29.9830 - 5.8182 0.99 2825 149 0.2273 0.2506 REMARK 3 2 5.8182 - 4.6235 1.00 2664 142 0.2051 0.2455 REMARK 3 3 4.6235 - 4.0407 1.00 2632 138 0.1845 0.2204 REMARK 3 4 4.0407 - 3.6719 0.99 2595 137 0.2430 0.2903 REMARK 3 5 3.6719 - 3.4092 0.99 2567 134 0.2780 0.3602 REMARK 3 6 3.4092 - 3.2084 1.00 2583 137 0.2753 0.3182 REMARK 3 7 3.2084 - 3.0479 0.99 2554 136 0.2880 0.3969 REMARK 3 8 3.0479 - 2.9153 0.99 2547 134 0.3350 0.4081 REMARK 3 9 2.9153 - 2.8030 0.97 2501 133 0.4122 0.4919 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.20 REMARK 3 SHRINKAGE RADIUS : 0.95 REMARK 3 K_SOL : 0.29 REMARK 3 B_SOL : 49.02 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.920 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 33.950 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 6.03610 REMARK 3 B22 (A**2) : 6.03610 REMARK 3 B33 (A**2) : -13.04780 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 3183 REMARK 3 ANGLE : 1.340 4296 REMARK 3 CHIRALITY : 0.090 498 REMARK 3 PLANARITY : 0.006 567 REMARK 3 DIHEDRAL : 18.191 1198 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A REMARK 3 ORIGIN FOR THE GROUP (A): 55.2918 -52.1002 21.4952 REMARK 3 T TENSOR REMARK 3 T11: 0.7665 T22: 0.8238 REMARK 3 T33: 0.4278 T12: -0.0503 REMARK 3 T13: -0.0273 T23: 0.0720 REMARK 3 L TENSOR REMARK 3 L11: 5.1741 L22: 5.6416 REMARK 3 L33: 4.9264 L12: -1.6326 REMARK 3 L13: -0.4315 L23: 2.8322 REMARK 3 S TENSOR REMARK 3 S11: 0.0170 S12: -0.8530 S13: -0.5845 REMARK 3 S21: 0.3322 S22: 0.0067 S23: 0.4015 REMARK 3 S31: 0.0240 S32: -0.0185 S33: 0.0216 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN B REMARK 3 ORIGIN FOR THE GROUP (A): 46.3219 -32.6852 18.5174 REMARK 3 T TENSOR REMARK 3 T11: 0.4324 T22: 0.9195 REMARK 3 T33: 0.3319 T12: 0.0352 REMARK 3 T13: 0.0742 T23: -0.1646 REMARK 3 L TENSOR REMARK 3 L11: 1.9913 L22: 4.0522 REMARK 3 L33: 5.4446 L12: 0.4720 REMARK 3 L13: 0.8309 L23: -0.3213 REMARK 3 S TENSOR REMARK 3 S11: 0.2111 S12: -0.3840 S13: 0.3883 REMARK 3 S21: 0.5330 S22: -0.3653 S23: 0.3399 REMARK 3 S31: -0.1310 S32: -1.3266 S33: 0.0893 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN C REMARK 3 ORIGIN FOR THE GROUP (A): 93.9996 -30.2233 13.5778 REMARK 3 T TENSOR REMARK 3 T11: 0.6925 T22: 1.3606 REMARK 3 T33: 0.6211 T12: -0.2398 REMARK 3 T13: -0.1473 T23: -0.0904 REMARK 3 L TENSOR REMARK 3 L11: 8.0777 L22: 6.8804 REMARK 3 L33: 4.2004 L12: -0.2448 REMARK 3 L13: 1.8983 L23: 0.6637 REMARK 3 S TENSOR REMARK 3 S11: -0.2051 S12: 0.6137 S13: 0.3817 REMARK 3 S21: 0.5241 S22: 0.6733 S23: -0.9017 REMARK 3 S31: -0.3789 S32: 2.2157 S33: -0.4357 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN D REMARK 3 ORIGIN FOR THE GROUP (A): 73.8704 -36.2895 14.6188 REMARK 3 T TENSOR REMARK 3 T11: 0.4467 T22: 0.6174 REMARK 3 T33: 0.2563 T12: 0.0250 REMARK 3 T13: -0.0917 T23: -0.0716 REMARK 3 L TENSOR REMARK 3 L11: 3.7447 L22: 5.0812 REMARK 3 L33: 7.1027 L12: -1.8442 REMARK 3 L13: -2.1298 L23: -1.7308 REMARK 3 S TENSOR REMARK 3 S11: 0.1474 S12: -0.0267 S13: 0.1559 REMARK 3 S21: -0.0702 S22: 0.0317 S23: -0.0397 REMARK 3 S31: -0.2862 S32: -0.1651 S33: -0.1821 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4DFC COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 27-JAN-12. REMARK 100 THE DEPOSITION ID IS D_1000070258. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 25-NOV-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 8.2.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL, SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 24835 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.800 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.07500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.85 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 3FPN REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 69.26 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.89 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 10% PEG3350, 4% TACSIMATE PH 4.8 , REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 62 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z REMARK 290 5555 Y,-X+Y,Z+2/3 REMARK 290 6555 X-Y,X,Z+1/3 REMARK 290 7555 Y,X,-Z+2/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+1/3 REMARK 290 10555 -Y,-X,-Z+2/3 REMARK 290 11555 -X+Y,Y,-Z REMARK 290 12555 X,X-Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 156.22267 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 78.11133 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 156.22267 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 78.11133 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 156.22267 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 78.11133 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 156.22267 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 78.11133 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 121 REMARK 465 PRO A 122 REMARK 465 HIS A 123 REMARK 465 MET A 124 REMARK 465 ALA A 125 REMARK 465 SER A 126 REMARK 465 ALA A 127 REMARK 465 LEU A 128 REMARK 465 GLY B 125 REMARK 465 PRO B 126 REMARK 465 HIS B 127 REMARK 465 ASP B 211 REMARK 465 ASP B 212 REMARK 465 GLY C 121 REMARK 465 PRO C 122 REMARK 465 HIS C 123 REMARK 465 MET C 124 REMARK 465 ALA C 125 REMARK 465 SER C 126 REMARK 465 ALA C 127 REMARK 465 LEU C 128 REMARK 465 ALA C 208 REMARK 465 ILE C 209 REMARK 465 ASN C 210 REMARK 465 LEU C 211 REMARK 465 LEU C 212 REMARK 465 PRO C 213 REMARK 465 GLY D 125 REMARK 465 PRO D 126 REMARK 465 ASP D 212 REMARK 465 LEU D 213 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 131 CG CD CE NZ REMARK 470 GLU A 177 CG CD OE1 OE2 REMARK 470 MET B 128 CG SD CE REMARK 470 LYS B 208 CE NZ REMARK 470 ARG B 210 NE CZ NH1 NH2 REMARK 470 LYS B 241 CG CD CE NZ REMARK 470 VAL C 129 CG1 CG2 REMARK 470 LYS C 131 CG CD CE NZ REMARK 470 GLN C 134 CG CD OE1 NE2 REMARK 470 ARG C 151 CG CD NE CZ NH1 NH2 REMARK 470 GLU C 177 CG CD OE1 OE2 REMARK 470 LEU C 178 CD1 CD2 REMARK 470 GLU C 188 CG CD OE1 OE2 REMARK 470 GLU C 204 CG CD OE1 OE2 REMARK 470 VAL C 206 CG1 CG2 REMARK 470 GLU C 207 CG CD OE1 OE2 REMARK 470 LYS D 164 CG CD CE NZ REMARK 470 LYS D 191 CG CD CE NZ REMARK 470 ARG D 210 NE CZ NH1 NH2 REMARK 470 ARG D 216 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE2 GLU B 193 NZ LYS B 196 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 136 168.41 178.23 REMARK 500 ASP A 186 -119.63 50.19 REMARK 500 ALA B 129 63.27 62.22 REMARK 500 LEU B 140 -17.28 75.20 REMARK 500 ILE B 154 -61.41 -105.57 REMARK 500 VAL B 209 77.07 65.96 REMARK 500 THR B 214 -135.45 62.47 REMARK 500 GLN B 215 -101.40 49.79 REMARK 500 ARG C 138 -111.77 53.16 REMARK 500 MET C 157 -58.14 -127.59 REMARK 500 ASP C 187 -2.14 86.76 REMARK 500 ASP C 190 -70.96 -99.51 REMARK 500 GLN C 200 -2.88 75.02 REMARK 500 LEU C 203 -77.79 -122.69 REMARK 500 GLU C 204 -78.15 -124.14 REMARK 500 GLU C 205 173.32 173.60 REMARK 500 MET D 128 74.32 58.45 REMARK 500 LEU D 140 -17.76 80.25 REMARK 500 ASP D 188 69.57 -119.31 REMARK 500 REMARK 500 REMARK: NULL DBREF 4DFC A 127 213 UNP P30958 MFD_ECOLI 127 213 DBREF 4DFC B 131 250 UNP P0A698 UVRA_ECOLI 131 250 DBREF 4DFC C 127 213 UNP P30958 MFD_ECOLI 127 213 DBREF 4DFC D 131 250 UNP P0A698 UVRA_ECOLI 131 250 SEQADV 4DFC GLY A 121 UNP P30958 EXPRESSION TAG SEQADV 4DFC PRO A 122 UNP P30958 EXPRESSION TAG SEQADV 4DFC HIS A 123 UNP P30958 EXPRESSION TAG SEQADV 4DFC MET A 124 UNP P30958 EXPRESSION TAG SEQADV 4DFC ALA A 125 UNP P30958 EXPRESSION TAG SEQADV 4DFC SER A 126 UNP P30958 EXPRESSION TAG SEQADV 4DFC GLY B 125 UNP P0A698 EXPRESSION TAG SEQADV 4DFC PRO B 126 UNP P0A698 EXPRESSION TAG SEQADV 4DFC HIS B 127 UNP P0A698 EXPRESSION TAG SEQADV 4DFC MET B 128 UNP P0A698 EXPRESSION TAG SEQADV 4DFC ALA B 129 UNP P0A698 EXPRESSION TAG SEQADV 4DFC SER B 130 UNP P0A698 EXPRESSION TAG SEQADV 4DFC GLY C 121 UNP P30958 EXPRESSION TAG SEQADV 4DFC PRO C 122 UNP P30958 EXPRESSION TAG SEQADV 4DFC HIS C 123 UNP P30958 EXPRESSION TAG SEQADV 4DFC MET C 124 UNP P30958 EXPRESSION TAG SEQADV 4DFC ALA C 125 UNP P30958 EXPRESSION TAG SEQADV 4DFC SER C 126 UNP P30958 EXPRESSION TAG SEQADV 4DFC GLY D 125 UNP P0A698 EXPRESSION TAG SEQADV 4DFC PRO D 126 UNP P0A698 EXPRESSION TAG SEQADV 4DFC HIS D 127 UNP P0A698 EXPRESSION TAG SEQADV 4DFC MET D 128 UNP P0A698 EXPRESSION TAG SEQADV 4DFC ALA D 129 UNP P0A698 EXPRESSION TAG SEQADV 4DFC SER D 130 UNP P0A698 EXPRESSION TAG SEQRES 1 A 93 GLY PRO HIS MET ALA SER ALA LEU VAL MET LYS LYS GLY SEQRES 2 A 93 GLN ARG LEU SER ARG ASP ALA LEU ARG THR GLN LEU ASP SEQRES 3 A 93 SER ALA GLY TYR ARG HIS VAL ASP GLN VAL MET GLU HIS SEQRES 4 A 93 GLY GLU TYR ALA THR ARG GLY ALA LEU LEU ASP LEU PHE SEQRES 5 A 93 PRO MET GLY SER GLU LEU PRO TYR ARG LEU ASP PHE PHE SEQRES 6 A 93 ASP ASP GLU ILE ASP SER LEU ARG VAL PHE ASP VAL ASP SEQRES 7 A 93 SER GLN ARG THR LEU GLU GLU VAL GLU ALA ILE ASN LEU SEQRES 8 A 93 LEU PRO SEQRES 1 B 126 GLY PRO HIS MET ALA SER THR VAL SER GLN MET VAL ASP SEQRES 2 B 126 ASN VAL LEU SER GLN PRO GLU GLY LYS ARG LEU MET LEU SEQRES 3 B 126 LEU ALA PRO ILE ILE LYS GLU ARG LYS GLY GLU HIS THR SEQRES 4 B 126 LYS THR LEU GLU ASN LEU ALA SER GLN GLY TYR ILE ARG SEQRES 5 B 126 ALA ARG ILE ASP GLY GLU VAL CYS ASP LEU SER ASP PRO SEQRES 6 B 126 PRO LYS LEU GLU LEU GLN LYS LYS HIS THR ILE GLU VAL SEQRES 7 B 126 VAL VAL ASP ARG PHE LYS VAL ARG ASP ASP LEU THR GLN SEQRES 8 B 126 ARG LEU ALA GLU SER PHE GLU THR ALA LEU GLU LEU SER SEQRES 9 B 126 GLY GLY THR ALA VAL VAL ALA ASP MET ASP ASP PRO LYS SEQRES 10 B 126 ALA GLU GLU LEU LEU PHE SER ALA ASN SEQRES 1 C 93 GLY PRO HIS MET ALA SER ALA LEU VAL MET LYS LYS GLY SEQRES 2 C 93 GLN ARG LEU SER ARG ASP ALA LEU ARG THR GLN LEU ASP SEQRES 3 C 93 SER ALA GLY TYR ARG HIS VAL ASP GLN VAL MET GLU HIS SEQRES 4 C 93 GLY GLU TYR ALA THR ARG GLY ALA LEU LEU ASP LEU PHE SEQRES 5 C 93 PRO MET GLY SER GLU LEU PRO TYR ARG LEU ASP PHE PHE SEQRES 6 C 93 ASP ASP GLU ILE ASP SER LEU ARG VAL PHE ASP VAL ASP SEQRES 7 C 93 SER GLN ARG THR LEU GLU GLU VAL GLU ALA ILE ASN LEU SEQRES 8 C 93 LEU PRO SEQRES 1 D 126 GLY PRO HIS MET ALA SER THR VAL SER GLN MET VAL ASP SEQRES 2 D 126 ASN VAL LEU SER GLN PRO GLU GLY LYS ARG LEU MET LEU SEQRES 3 D 126 LEU ALA PRO ILE ILE LYS GLU ARG LYS GLY GLU HIS THR SEQRES 4 D 126 LYS THR LEU GLU ASN LEU ALA SER GLN GLY TYR ILE ARG SEQRES 5 D 126 ALA ARG ILE ASP GLY GLU VAL CYS ASP LEU SER ASP PRO SEQRES 6 D 126 PRO LYS LEU GLU LEU GLN LYS LYS HIS THR ILE GLU VAL SEQRES 7 D 126 VAL VAL ASP ARG PHE LYS VAL ARG ASP ASP LEU THR GLN SEQRES 8 D 126 ARG LEU ALA GLU SER PHE GLU THR ALA LEU GLU LEU SER SEQRES 9 D 126 GLY GLY THR ALA VAL VAL ALA ASP MET ASP ASP PRO LYS SEQRES 10 D 126 ALA GLU GLU LEU LEU PHE SER ALA ASN HELIX 1 1 SER A 137 ALA A 148 1 12 HELIX 2 2 THR B 131 VAL B 139 1 9 HELIX 3 3 HIS B 162 GLY B 173 1 12 HELIX 4 4 GLN B 215 SER B 228 1 14 HELIX 5 5 ARG C 138 ALA C 148 1 11 HELIX 6 6 THR D 131 VAL D 139 1 9 HELIX 7 7 HIS D 162 GLN D 172 1 11 HELIX 8 8 GLN D 215 GLY D 229 1 15 SHEET 1 A 2 MET A 130 LYS A 131 0 SHEET 2 A 2 ALA A 208 ILE A 209 -1 O ILE A 209 N MET A 130 SHEET 1 B 6 ARG A 151 HIS A 152 0 SHEET 2 B 6 GLU A 161 ARG A 165 1 O TYR A 162 N ARG A 151 SHEET 3 B 6 LEU A 168 PHE A 172 -1 O LEU A 168 N ARG A 165 SHEET 4 B 6 TYR A 180 PHE A 185 -1 O TYR A 180 N LEU A 171 SHEET 5 B 6 GLU A 188 PHE A 195 -1 O ASP A 190 N ASP A 183 SHEET 6 B 6 THR A 202 VAL A 206 -1 O LEU A 203 N VAL A 194 SHEET 1 C 6 GLU B 182 ASP B 185 0 SHEET 2 C 6 ARG B 176 ILE B 179 -1 N ALA B 177 O CYS B 184 SHEET 3 C 6 LYS B 197 PHE B 207 -1 O GLU B 201 N ARG B 178 SHEET 4 C 6 LEU B 148 LYS B 159 -1 N ILE B 154 O ILE B 200 SHEET 5 C 6 THR B 231 ASP B 236 -1 O VAL B 233 N LEU B 151 SHEET 6 C 6 LEU B 245 SER B 248 -1 O PHE B 247 N ALA B 232 SHEET 1 D 5 ARG C 151 HIS C 152 0 SHEET 2 D 5 GLU C 161 ARG C 165 1 O TYR C 162 N ARG C 151 SHEET 3 D 5 LEU C 168 LEU C 171 -1 O LEU C 168 N ARG C 165 SHEET 4 D 5 TYR C 180 PHE C 185 -1 O LEU C 182 N LEU C 169 SHEET 5 D 5 GLU C 188 VAL C 194 -1 O ASP C 190 N ASP C 183 SHEET 1 E 6 GLU D 182 ASP D 185 0 SHEET 2 E 6 ARG D 176 ILE D 179 -1 N ALA D 177 O CYS D 184 SHEET 3 E 6 LYS D 197 LYS D 208 -1 O GLU D 201 N ARG D 178 SHEET 4 E 6 ARG D 147 LYS D 159 -1 N ARG D 158 O HIS D 198 SHEET 5 E 6 THR D 231 ASP D 236 -1 O VAL D 233 N LEU D 151 SHEET 6 E 6 LEU D 245 SER D 248 -1 O LEU D 245 N VAL D 234 CRYST1 119.168 119.168 234.334 90.00 90.00 120.00 P 62 2 2 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008392 0.004845 0.000000 0.00000 SCALE2 0.000000 0.009690 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004267 0.00000