HEADER TRANSFERASE/TRANSFERASE INHIBITOR 24-JAN-12 4DFN TITLE CRYSTAL STRUCTURE OF SPLEEN TYROSINE KINASE COMPLEXED WITH AN TITLE 2 ADAMANTYLPYRAZINE INHIBITOR COMPND MOL_ID: 1; COMPND 2 MOLECULE: TYROSINE-PROTEIN KINASE SYK; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: SPLEEN TYROSINE KINASE; COMPND 5 EC: 2.7.10.2; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: SYK; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS PROTEIN KINASE, TRANSFERASE-TRANSFERASE INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR M.LOPEZ,V.SEGARRA,B.VIDAL,C.WENZKOWSKI,A.JESTEL,S.KRAPP,M.BLAESSE, AUTHOR 2 S.NAGEL,P.SCHREINER REVDAT 4 28-FEB-24 4DFN 1 REMARK SEQADV REVDAT 3 11-APR-18 4DFN 1 SOURCE REMARK REVDAT 2 04-APR-18 4DFN 1 REMARK REVDAT 1 25-APR-12 4DFN 0 JRNL AUTH P.FORNS,C.ESTEVE,L.TABOADA,J.A.ALONSO,A.ORELLANA, JRNL AUTH 2 M.MALDONADO,C.CARRENO,I.RAMIS,M.LOPEZ,M.MIRALPEIX,B.VIDAL JRNL TITL PYRAZINE-BASED SYK KINASE INHIBITORS. JRNL REF BIOORG.MED.CHEM.LETT. V. 22 2784 2012 JRNL REFN ISSN 0960-894X JRNL PMID 22425453 JRNL DOI 10.1016/J.BMCL.2012.02.087 REMARK 2 REMARK 2 RESOLUTION. 2.48 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0088 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.48 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 62.06 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 11532 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.222 REMARK 3 R VALUE (WORKING SET) : 0.217 REMARK 3 FREE R VALUE : 0.273 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 8.800 REMARK 3 FREE R VALUE TEST SET COUNT : 1018 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.48 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.55 REMARK 3 REFLECTION IN BIN (WORKING SET) : 740 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 95.38 REMARK 3 BIN R VALUE (WORKING SET) : 0.2840 REMARK 3 BIN FREE R VALUE SET COUNT : 65 REMARK 3 BIN FREE R VALUE : 0.3760 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2190 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 33 REMARK 3 SOLVENT ATOMS : 22 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 73.52 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.58000 REMARK 3 B22 (A**2) : -2.91000 REMARK 3 B33 (A**2) : 2.32000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.684 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.325 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.230 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 21.562 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.933 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.889 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2288 ; 0.006 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 1579 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3091 ; 0.862 ; 1.978 REMARK 3 BOND ANGLES OTHERS (DEGREES): 3843 ; 0.744 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 269 ; 5.020 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 106 ;34.322 ;24.245 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 416 ;12.723 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 12 ;15.642 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 323 ; 0.054 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2499 ; 0.003 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 468 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1341 ; 1.134 ; 2.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 547 ; 0.244 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2152 ; 2.051 ; 3.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 947 ; 3.062 ; 4.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 939 ; 4.529 ; 6.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 363 A 450 REMARK 3 ORIGIN FOR THE GROUP (A): 11.5516 -2.4366 10.2999 REMARK 3 T TENSOR REMARK 3 T11: 0.3280 T22: 0.3040 REMARK 3 T33: 0.2185 T12: 0.0149 REMARK 3 T13: 0.1486 T23: 0.0067 REMARK 3 L TENSOR REMARK 3 L11: 3.3434 L22: 10.0069 REMARK 3 L33: 5.3642 L12: -0.0634 REMARK 3 L13: -1.6375 L23: 3.2098 REMARK 3 S TENSOR REMARK 3 S11: -0.2857 S12: 0.5165 S13: 0.0222 REMARK 3 S21: -1.3327 S22: -0.0468 S23: -0.4180 REMARK 3 S31: 0.0220 S32: 0.0118 S33: 0.3325 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 451 A 636 REMARK 3 ORIGIN FOR THE GROUP (A): 0.5402 16.1634 23.8650 REMARK 3 T TENSOR REMARK 3 T11: 0.0701 T22: 0.0967 REMARK 3 T33: 0.0325 T12: -0.0077 REMARK 3 T13: 0.0388 T23: -0.0189 REMARK 3 L TENSOR REMARK 3 L11: 4.5874 L22: 6.1882 REMARK 3 L33: 2.2641 L12: -0.8670 REMARK 3 L13: -0.6499 L23: -0.8606 REMARK 3 S TENSOR REMARK 3 S11: 0.0515 S12: -0.1102 S13: 0.2163 REMARK 3 S21: 0.2681 S22: 0.0623 S23: 0.0372 REMARK 3 S31: -0.0911 S32: -0.0153 S33: -0.1138 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS; U VALUES: RESIDUAL ONLY REMARK 4 REMARK 4 4DFN COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 27-JAN-12. REMARK 100 THE DEPOSITION ID IS D_1000070269. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 09-APR-09 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PILATUS 6M REMARK 200 DETECTOR MANUFACTURER : DECTRIS REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 11590 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.480 REMARK 200 RESOLUTION RANGE LOW (A) : 62.060 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 200 DATA REDUNDANCY : 5.600 REMARK 200 R MERGE (I) : 0.06900 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.48 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.64 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.2 REMARK 200 DATA REDUNDANCY IN SHELL : 5.50 REMARK 200 R MERGE FOR SHELL (I) : 0.81900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: OTHER REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NONE REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.28 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.52 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 20.14750 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 45.49800 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 42.42400 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 45.49800 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 20.14750 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 42.42400 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASN A 406 REMARK 465 GLU A 407 REMARK 465 ALA A 408 REMARK 465 ASN A 409 REMARK 465 ASP A 410 REMARK 475 REMARK 475 ZERO OCCUPANCY RESIDUES REMARK 475 THE FOLLOWING RESIDUES WERE MODELED WITH ZERO OCCUPANCY. REMARK 475 THE LOCATION AND PROPERTIES OF THESE RESIDUES MAY NOT REMARK 475 BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 475 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE) REMARK 475 M RES C SSEQI REMARK 475 GLY A 532 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 ARG A 367 CG REMARK 480 LYS A 368 NZ REMARK 480 GLU A 373 CG CD OE1 REMARK 480 LYS A 375 CE NZ REMARK 480 SER A 379 OG REMARK 480 ASN A 381 CG OD1 ND2 REMARK 480 LYS A 387 NZ REMARK 480 MET A 392 CE REMARK 480 LEU A 404 CG CD1 CD2 REMARK 480 LYS A 405 CB CG CD CE NZ REMARK 480 ALA A 412 CB REMARK 480 LEU A 413 CA CB CG CD1 CD2 REMARK 480 LYS A 414 CD CE NZ REMARK 480 ASP A 415 CB OD1 OD2 REMARK 480 GLU A 416 CG REMARK 480 GLN A 425 CD OE1 NE2 REMARK 480 ARG A 434 CG CD NE REMARK 480 ILE A 438 CG1 CG2 CD1 REMARK 480 LYS A 469 CD REMARK 480 GLU A 523 CG CD OE1 OE2 REMARK 480 LYS A 527 CE NZ REMARK 480 GLN A 529 CB CG OE1 NE2 REMARK 480 THR A 530 OG1 CG2 REMARK 480 HIS A 531 CB CG ND1 CD2 CE1 NE2 REMARK 480 LYS A 533 CB CG CD CE NZ REMARK 480 LYS A 548 CE NZ REMARK 480 GLN A 570 CB CG CD OE1 NE2 REMARK 480 LYS A 571 CG CD CE NZ REMARK 480 LYS A 577 CG CD CE NZ REMARK 480 LEU A 624 CD1 CD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 394 -56.18 -127.02 REMARK 500 ALA A 441 -138.15 -125.51 REMARK 500 ASP A 494 33.67 -151.03 REMARK 500 ASP A 512 83.88 61.62 REMARK 500 TRP A 609 35.42 -93.52 REMARK 500 ASN A 635 -15.69 88.77 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 0K1 A 701 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4DFL RELATED DB: PDB DBREF 4DFN A 363 635 UNP P43405 KSYK_HUMAN 363 635 SEQADV 4DFN GLU A 636 UNP P43405 EXPRESSION TAG SEQRES 1 A 274 VAL TYR LEU ASP ARG LYS LEU LEU THR LEU GLU ASP LYS SEQRES 2 A 274 GLU LEU GLY SER GLY ASN PHE GLY THR VAL LYS LYS GLY SEQRES 3 A 274 TYR TYR GLN MET LYS LYS VAL VAL LYS THR VAL ALA VAL SEQRES 4 A 274 LYS ILE LEU LYS ASN GLU ALA ASN ASP PRO ALA LEU LYS SEQRES 5 A 274 ASP GLU LEU LEU ALA GLU ALA ASN VAL MET GLN GLN LEU SEQRES 6 A 274 ASP ASN PRO TYR ILE VAL ARG MET ILE GLY ILE CYS GLU SEQRES 7 A 274 ALA GLU SER TRP MET LEU VAL MET GLU MET ALA GLU LEU SEQRES 8 A 274 GLY PRO LEU ASN LYS TYR LEU GLN GLN ASN ARG HIS VAL SEQRES 9 A 274 LYS ASP LYS ASN ILE ILE GLU LEU VAL HIS GLN VAL SER SEQRES 10 A 274 MET GLY MET LYS TYR LEU GLU GLU SER ASN PHE VAL HIS SEQRES 11 A 274 ARG ASP LEU ALA ALA ARG ASN VAL LEU LEU VAL THR GLN SEQRES 12 A 274 HIS TYR ALA LYS ILE SER ASP PHE GLY LEU SER LYS ALA SEQRES 13 A 274 LEU ARG ALA ASP GLU ASN TYR TYR LYS ALA GLN THR HIS SEQRES 14 A 274 GLY LYS TRP PRO VAL LYS TRP TYR ALA PRO GLU CYS ILE SEQRES 15 A 274 ASN TYR TYR LYS PHE SER SER LYS SER ASP VAL TRP SER SEQRES 16 A 274 PHE GLY VAL LEU MET TRP GLU ALA PHE SER TYR GLY GLN SEQRES 17 A 274 LYS PRO TYR ARG GLY MET LYS GLY SER GLU VAL THR ALA SEQRES 18 A 274 MET LEU GLU LYS GLY GLU ARG MET GLY CYS PRO ALA GLY SEQRES 19 A 274 CYS PRO ARG GLU MET TYR ASP LEU MET ASN LEU CYS TRP SEQRES 20 A 274 THR TYR ASP VAL GLU ASN ARG PRO GLY PHE ALA ALA VAL SEQRES 21 A 274 GLU LEU ARG LEU ARG ASN TYR TYR TYR ASP VAL VAL ASN SEQRES 22 A 274 GLU HET 0K1 A 701 33 HETNAM 0K1 3-AMINO-6-[3-(1-METHYL-1H-PYRAZOL-4-YL)PHENYL]-N-[(1R, HETNAM 2 0K1 2R,3S,5S,7S)-5-HYDROXYADAMANTAN-2-YL]PYRAZINE-2- HETNAM 3 0K1 CARBOXAMIDE FORMUL 2 0K1 C25 H28 N6 O2 FORMUL 3 HOH *22(H2 O) HELIX 1 1 ASP A 366 LYS A 368 5 3 HELIX 2 2 ALA A 412 LEU A 427 1 16 HELIX 3 3 LEU A 456 ASN A 463 1 8 HELIX 4 4 LYS A 467 SER A 488 1 22 HELIX 5 5 ALA A 496 ARG A 498 5 3 HELIX 6 6 PRO A 535 TYR A 539 5 5 HELIX 7 7 ALA A 540 TYR A 546 1 7 HELIX 8 8 SER A 550 SER A 567 1 18 HELIX 9 9 LYS A 577 LYS A 587 1 11 HELIX 10 10 PRO A 598 TRP A 609 1 12 HELIX 11 11 GLY A 618 VAL A 634 1 17 SHEET 1 A 5 LEU A 370 SER A 379 0 SHEET 2 A 5 GLY A 383 GLN A 391 -1 O TYR A 389 N THR A 371 SHEET 3 A 5 VAL A 396 LEU A 404 -1 O VAL A 399 N GLY A 388 SHEET 4 A 5 TRP A 444 GLU A 449 -1 O LEU A 446 N LYS A 402 SHEET 5 A 5 MET A 435 GLU A 440 -1 N GLY A 437 O VAL A 447 SHEET 1 B 3 GLY A 454 PRO A 455 0 SHEET 2 B 3 VAL A 500 THR A 504 -1 O LEU A 502 N GLY A 454 SHEET 3 B 3 TYR A 507 ILE A 510 -1 O LYS A 509 N LEU A 501 SHEET 1 C 2 PHE A 490 VAL A 491 0 SHEET 2 C 2 LYS A 517 ALA A 518 -1 O LYS A 517 N VAL A 491 SHEET 1 D 2 TYR A 526 LYS A 527 0 SHEET 2 D 2 LYS A 548 PHE A 549 -1 O PHE A 549 N TYR A 526 SITE 1 AC1 11 VAL A 385 ALA A 400 MET A 448 GLU A 449 SITE 2 AC1 11 MET A 450 ALA A 451 LYS A 458 LEU A 501 SITE 3 AC1 11 SER A 511 ASP A 512 HOH A 817 CRYST1 40.295 84.848 90.996 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.024817 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011786 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010989 0.00000