HEADER CELL ADHESION/PROTEIN BINDING 27-JAN-12 4DH2 TITLE CRYSTAL STRUCTURE OF COH-OLPC(CTHE_0452)-DOC435(CTHE_0435) COMPLEX: A TITLE 2 NOVEL TYPE I COHESIN-DOCKERIN COMPLEX FROM CLOSTRIDIUM THERMOCELLUM TITLE 3 ATTC 27405 COMPND MOL_ID: 1; COMPND 2 MOLECULE: CELLULOSOME ANCHORING PROTEIN COHESIN REGION; COMPND 3 CHAIN: A, C; COMPND 4 FRAGMENT: UNP RESIDUES 99-257; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: DOCKERIN TYPE 1; COMPND 8 CHAIN: B, D; COMPND 9 FRAGMENT: UNP RESIDUES 32-112; COMPND 10 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CLOSTRIDIUM THERMOCELLUM; SOURCE 3 ORGANISM_TAXID: 203119; SOURCE 4 STRAIN: ATCC 27405; SOURCE 5 GENE: CTHE_0452; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: TUNER CELLS; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET21A; SOURCE 11 MOL_ID: 2; SOURCE 12 ORGANISM_SCIENTIFIC: CLOSTRIDIUM THERMOCELLUM; SOURCE 13 ORGANISM_TAXID: 203119; SOURCE 14 STRAIN: ATCC 27405; SOURCE 15 GENE: CTHE_0435; SOURCE 16 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 17 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 18 EXPRESSION_SYSTEM_STRAIN: TUNER CELLS; SOURCE 19 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 20 EXPRESSION_SYSTEM_PLASMID: PET21A KEYWDS CELLULOSOME, COHESIN, DOCKERIN, TYPE I COHESIN-DOCKERIN, PROTEIN- KEYWDS 2 PROTEIN INTERACTION, CELL ADHESION, CELL ADHESION-PROTEIN BINDING KEYWDS 3 COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR V.D.ALVES,A.L.CARVALHO,S.H.NAJMUDIN,J.BRAS,J.A.M.PRATES, AUTHOR 2 C.M.G.A.FONTES REVDAT 3 13-SEP-23 4DH2 1 REMARK SEQADV LINK REVDAT 2 30-JAN-13 4DH2 1 JRNL REVDAT 1 28-NOV-12 4DH2 0 JRNL AUTH J.L.BRAS,V.D.ALVES,A.L.CARVALHO,S.NAJMUDIN,J.A.PRATES, JRNL AUTH 2 L.M.FERREIRA,D.N.BOLAM,M.J.ROMAO,H.J.GILBERT,C.M.FONTES JRNL TITL NOVEL CLOSTRIDIUM THERMOCELLUM TYPE I COHESIN-DOCKERIN JRNL TITL 2 COMPLEXES REVEAL A SINGLE BINDING MODE. JRNL REF J.BIOL.CHEM. V. 287 44394 2012 JRNL REFN ISSN 0021-9258 JRNL PMID 23118225 JRNL DOI 10.1074/JBC.M112.407700 REMARK 2 REMARK 2 RESOLUTION. 1.75 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.7.2_865 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.75 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 39.30 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 65956 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.183 REMARK 3 R VALUE (WORKING SET) : 0.181 REMARK 3 FREE R VALUE : 0.215 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.070 REMARK 3 FREE R VALUE TEST SET COUNT : 3344 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 39.3101 - 5.0302 0.99 2821 113 0.2100 0.2253 REMARK 3 2 5.0302 - 3.9938 1.00 2685 145 0.1315 0.1541 REMARK 3 3 3.9938 - 3.4893 1.00 2642 147 0.1568 0.1941 REMARK 3 4 3.4893 - 3.1705 1.00 2648 147 0.1844 0.1976 REMARK 3 5 3.1705 - 2.9433 1.00 2635 139 0.1963 0.2076 REMARK 3 6 2.9433 - 2.7698 1.00 2593 161 0.1924 0.2454 REMARK 3 7 2.7698 - 2.6311 1.00 2607 148 0.1798 0.2294 REMARK 3 8 2.6311 - 2.5166 1.00 2612 125 0.1691 0.1998 REMARK 3 9 2.5166 - 2.4198 1.00 2627 139 0.1736 0.2206 REMARK 3 10 2.4198 - 2.3363 1.00 2582 130 0.1820 0.2536 REMARK 3 11 2.3363 - 2.2632 1.00 2606 139 0.1636 0.2420 REMARK 3 12 2.2632 - 2.1985 1.00 2609 126 0.1690 0.2097 REMARK 3 13 2.1985 - 2.1407 1.00 2594 134 0.1665 0.2208 REMARK 3 14 2.1407 - 2.0884 1.00 2605 146 0.1664 0.1980 REMARK 3 15 2.0884 - 2.0410 1.00 2575 135 0.1702 0.2357 REMARK 3 16 2.0410 - 1.9975 1.00 2605 132 0.1814 0.2234 REMARK 3 17 1.9975 - 1.9576 1.00 2575 137 0.1840 0.1947 REMARK 3 18 1.9576 - 1.9206 1.00 2558 156 0.2058 0.2355 REMARK 3 19 1.9206 - 1.8863 1.00 2578 141 0.2237 0.2856 REMARK 3 20 1.8863 - 1.8544 1.00 2582 139 0.2383 0.2853 REMARK 3 21 1.8544 - 1.8244 1.00 2565 146 0.2477 0.2906 REMARK 3 22 1.8244 - 1.7964 1.00 2605 143 0.2565 0.2861 REMARK 3 23 1.7964 - 1.7700 1.00 2533 151 0.2708 0.2842 REMARK 3 24 1.7700 - 1.7450 1.00 2570 125 0.2924 0.3194 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.20 REMARK 3 SHRINKAGE RADIUS : 0.98 REMARK 3 K_SOL : 0.38 REMARK 3 B_SOL : 51.56 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.470 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 21.950 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 35.30 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.56040 REMARK 3 B22 (A**2) : 1.56040 REMARK 3 B33 (A**2) : -3.12070 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.014 3854 REMARK 3 ANGLE : 1.296 5281 REMARK 3 CHIRALITY : 0.083 575 REMARK 3 PLANARITY : 0.006 656 REMARK 3 DIHEDRAL : 12.617 1409 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): 24.4374 9.5578 -9.7545 REMARK 3 T TENSOR REMARK 3 T11: 0.1059 T22: 0.1919 REMARK 3 T33: 0.1677 T12: -0.0510 REMARK 3 T13: -0.0139 T23: -0.0282 REMARK 3 L TENSOR REMARK 3 L11: 0.0167 L22: 0.2502 REMARK 3 L33: 0.5892 L12: -0.0464 REMARK 3 L13: 0.0078 L23: 0.0437 REMARK 3 S TENSOR REMARK 3 S11: 0.0037 S12: 0.0219 S13: 0.0441 REMARK 3 S21: 0.0119 S22: 0.0252 S23: -0.0649 REMARK 3 S31: -0.0385 S32: 0.0890 S33: 0.0229 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4DH2 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 30-JAN-12. REMARK 100 THE DEPOSITION ID IS D_1000070319. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 24-NOV-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.933 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA 3.2.25 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 66027 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.745 REMARK 200 RESOLUTION RANGE LOW (A) : 78.600 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 14.90 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.09000 REMARK 200 FOR THE DATA SET : 18.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.74 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.84 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.6 REMARK 200 DATA REDUNDANCY IN SHELL : 8.80 REMARK 200 R MERGE FOR SHELL (I) : 0.88700 REMARK 200 R SYM FOR SHELL (I) : 0.88700 REMARK 200 FOR SHELL : 2.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: DM 6.0, BALBES REMARK 200 STARTING MODEL: PDB ENTRY 2CCL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 56.27 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.81 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2 M AMMONIUM SULFATE, PH 4.6, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 90.04667 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 45.02333 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 45.02333 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 90.04667 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2350 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 11750 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -69.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2240 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 11330 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -58.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 SER A 3 REMARK 465 VAL A 4 REMARK 465 VAL A 5 REMARK 465 ALA A 6 REMARK 465 HIS A 165 REMARK 465 HIS A 166 REMARK 465 HIS A 167 REMARK 465 HIS A 168 REMARK 465 HIS A 169 REMARK 465 HIS A 170 REMARK 465 MET B 1 REMARK 465 TRP B 2 REMARK 465 ASN B 3 REMARK 465 LYS B 4 REMARK 465 ASN B 77 REMARK 465 SER B 78 REMARK 465 ALA B 79 REMARK 465 PRO B 80 REMARK 465 THR B 81 REMARK 465 PHE B 82 REMARK 465 MET C 1 REMARK 465 ALA C 2 REMARK 465 SER C 3 REMARK 465 VAL C 4 REMARK 465 VAL C 5 REMARK 465 ALA C 6 REMARK 465 ILE C 7 REMARK 465 GLU C 164 REMARK 465 HIS C 165 REMARK 465 HIS C 166 REMARK 465 HIS C 167 REMARK 465 HIS C 168 REMARK 465 HIS C 169 REMARK 465 HIS C 170 REMARK 465 MET D 1 REMARK 465 TRP D 2 REMARK 465 ASN D 3 REMARK 465 LYS D 4 REMARK 465 SER D 75 REMARK 465 TYR D 76 REMARK 465 ASN D 77 REMARK 465 SER D 78 REMARK 465 ALA D 79 REMARK 465 PRO D 80 REMARK 465 THR D 81 REMARK 465 PHE D 82 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HH22 ARG D 62 O HOH D 256 1.57 REMARK 500 O4 SO4 A 201 O HOH A 455 1.99 REMARK 500 OH TYR A 80 O HOH A 392 2.06 REMARK 500 O HOH A 395 O HOH A 401 2.13 REMARK 500 O HOH D 229 O HOH D 256 2.14 REMARK 500 OH TYR C 80 O HOH C 415 2.17 REMARK 500 NH2 ARG D 62 O HOH D 256 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 73 64.74 22.22 REMARK 500 ASP A 95 90.68 -67.68 REMARK 500 ASN B 53 -163.77 -162.69 REMARK 500 ASP C 73 60.28 26.24 REMARK 500 ASP D 39 69.97 67.76 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 101 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 9 OD1 REMARK 620 2 ASN B 11 OD1 80.8 REMARK 620 3 ASP B 13 OD1 84.0 81.4 REMARK 620 4 VAL B 15 O 84.8 158.0 80.6 REMARK 620 5 ASP B 20 OD2 123.3 121.3 144.9 80.5 REMARK 620 6 ASP B 20 OD1 89.1 77.9 159.0 118.6 53.4 REMARK 620 7 HOH B 201 O 158.1 82.8 79.2 106.1 77.9 101.5 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 102 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 45 OD1 REMARK 620 2 ASN B 47 OD1 78.6 REMARK 620 3 ASP B 49 OD1 77.9 80.5 REMARK 620 4 VAL B 51 O 82.8 157.9 84.0 REMARK 620 5 ASP B 56 OD1 93.0 79.4 159.2 113.7 REMARK 620 6 ASP B 56 OD2 124.9 123.0 147.9 77.8 51.6 REMARK 620 7 HOH B 202 O 155.7 91.9 78.5 100.3 107.4 79.0 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA D 101 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP D 9 OD1 REMARK 620 2 ASN D 11 OD1 74.0 REMARK 620 3 ASP D 13 OD1 83.6 80.9 REMARK 620 4 VAL D 15 O 84.9 154.6 82.8 REMARK 620 5 ASP D 20 OD2 124.0 124.1 145.2 79.5 REMARK 620 6 ASP D 20 OD1 85.9 80.3 160.4 112.7 53.3 REMARK 620 7 HOH D 201 O 156.4 86.4 80.3 110.0 77.9 104.0 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA D 102 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP D 45 OD1 REMARK 620 2 ASN D 47 OD1 79.9 REMARK 620 3 ASP D 49 OD1 79.0 80.5 REMARK 620 4 VAL D 51 O 83.2 159.2 84.4 REMARK 620 5 ASP D 56 OD1 90.2 78.0 157.3 114.4 REMARK 620 6 ASP D 56 OD2 127.0 120.3 147.0 79.8 54.0 REMARK 620 7 HOH D 202 O 154.8 93.0 76.0 97.1 112.2 77.5 REMARK 620 N 1 2 3 4 5 6 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA B 101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA B 102 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 103 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 104 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 C 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 C 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 C 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 C 204 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA D 101 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA D 102 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3UL4 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF COH-OLPA(CTHE_3080)-DOC918(CTHE_0918) COMPLEX: REMARK 900 A NOVEL TYPE I COHESIN-DOCKERIN COMPLEX FROM CLOSTRIDIUM REMARK 900 THERMOCELLUM ATTC 27405 DBREF 4DH2 A 4 162 UNP A3DCL1 A3DCL1_CLOTH 99 257 DBREF 4DH2 B 2 82 UNP A3DCJ4 A3DCJ4_CLOTH 32 112 DBREF 4DH2 C 4 162 UNP A3DCL1 A3DCL1_CLOTH 99 257 DBREF 4DH2 D 2 82 UNP A3DCJ4 A3DCJ4_CLOTH 32 112 SEQADV 4DH2 MET A 1 UNP A3DCL1 INITIATING METHIONINE SEQADV 4DH2 ALA A 2 UNP A3DCL1 EXPRESSION TAG SEQADV 4DH2 SER A 3 UNP A3DCL1 EXPRESSION TAG SEQADV 4DH2 LEU A 163 UNP A3DCL1 EXPRESSION TAG SEQADV 4DH2 GLU A 164 UNP A3DCL1 EXPRESSION TAG SEQADV 4DH2 HIS A 165 UNP A3DCL1 EXPRESSION TAG SEQADV 4DH2 HIS A 166 UNP A3DCL1 EXPRESSION TAG SEQADV 4DH2 HIS A 167 UNP A3DCL1 EXPRESSION TAG SEQADV 4DH2 HIS A 168 UNP A3DCL1 EXPRESSION TAG SEQADV 4DH2 HIS A 169 UNP A3DCL1 EXPRESSION TAG SEQADV 4DH2 HIS A 170 UNP A3DCL1 EXPRESSION TAG SEQADV 4DH2 MET B 1 UNP A3DCJ4 INITIATING METHIONINE SEQADV 4DH2 MET C 1 UNP A3DCL1 INITIATING METHIONINE SEQADV 4DH2 ALA C 2 UNP A3DCL1 EXPRESSION TAG SEQADV 4DH2 SER C 3 UNP A3DCL1 EXPRESSION TAG SEQADV 4DH2 LEU C 163 UNP A3DCL1 EXPRESSION TAG SEQADV 4DH2 GLU C 164 UNP A3DCL1 EXPRESSION TAG SEQADV 4DH2 HIS C 165 UNP A3DCL1 EXPRESSION TAG SEQADV 4DH2 HIS C 166 UNP A3DCL1 EXPRESSION TAG SEQADV 4DH2 HIS C 167 UNP A3DCL1 EXPRESSION TAG SEQADV 4DH2 HIS C 168 UNP A3DCL1 EXPRESSION TAG SEQADV 4DH2 HIS C 169 UNP A3DCL1 EXPRESSION TAG SEQADV 4DH2 HIS C 170 UNP A3DCL1 EXPRESSION TAG SEQADV 4DH2 MET D 1 UNP A3DCJ4 INITIATING METHIONINE SEQRES 1 A 170 MET ALA SER VAL VAL ALA ILE HIS GLU ALA GLU THR ALA SEQRES 2 A 170 ASP TYR ILE LEU ASP VAL LEU VAL GLU GLY VAL LYS ALA SEQRES 3 A 170 LYS ALA GLY ASP THR VAL GLU ILE PRO LEU LYS PHE GLU SEQRES 4 A 170 ASN VAL PRO SER HIS GLY ILE GLN SER PHE ASN LEU SER SEQRES 5 A 170 LEU TYR TYR ASP SER LYS ALA ILE GLU VAL LEU LYS VAL SEQRES 6 A 170 GLU PRO GLY SER ILE ILE THR ASP PRO ALA ASN ASN PHE SEQRES 7 A 170 ASP TYR ASN ILE VAL TYR LYS ASP SER GLU ILE VAL PHE SEQRES 8 A 170 LEU PHE ASP ASP ASP LYS GLN LYS GLY GLU GLY LEU ILE SEQRES 9 A 170 LYS THR ASP GLY VAL PHE ALA LYS LEU THR VAL ARG ILE SEQRES 10 A 170 LYS PRO ASP ILE PHE LYS ASP SER GLY SER THR LYS LYS SEQRES 11 A 170 TYR SER LEU ILE THR PHE GLY GLU SER ASN PHE CYS ASP SEQRES 12 A 170 PHE ASP LEU LYS PRO ILE LEU ALA VAL LEU LYS GLU GLY SEQRES 13 A 170 LYS VAL GLU ILE GLU LYS LEU GLU HIS HIS HIS HIS HIS SEQRES 14 A 170 HIS SEQRES 1 B 82 MET TRP ASN LYS ALA VAL ILE GLY ASP VAL ASN ALA ASP SEQRES 2 B 82 GLY VAL VAL ASN ILE SER ASP TYR VAL LEU MET LYS ARG SEQRES 3 B 82 TYR ILE LEU ARG ILE ILE ALA ASP PHE PRO ALA ASP ASP SEQRES 4 B 82 ASP MET TRP VAL GLY ASP VAL ASN GLY ASP ASN VAL ILE SEQRES 5 B 82 ASN ASP ILE ASP CYS ASN TYR LEU LYS ARG TYR LEU LEU SEQRES 6 B 82 HIS MET ILE ARG GLU PHE PRO LYS ASN SER TYR ASN SER SEQRES 7 B 82 ALA PRO THR PHE SEQRES 1 C 170 MET ALA SER VAL VAL ALA ILE HIS GLU ALA GLU THR ALA SEQRES 2 C 170 ASP TYR ILE LEU ASP VAL LEU VAL GLU GLY VAL LYS ALA SEQRES 3 C 170 LYS ALA GLY ASP THR VAL GLU ILE PRO LEU LYS PHE GLU SEQRES 4 C 170 ASN VAL PRO SER HIS GLY ILE GLN SER PHE ASN LEU SER SEQRES 5 C 170 LEU TYR TYR ASP SER LYS ALA ILE GLU VAL LEU LYS VAL SEQRES 6 C 170 GLU PRO GLY SER ILE ILE THR ASP PRO ALA ASN ASN PHE SEQRES 7 C 170 ASP TYR ASN ILE VAL TYR LYS ASP SER GLU ILE VAL PHE SEQRES 8 C 170 LEU PHE ASP ASP ASP LYS GLN LYS GLY GLU GLY LEU ILE SEQRES 9 C 170 LYS THR ASP GLY VAL PHE ALA LYS LEU THR VAL ARG ILE SEQRES 10 C 170 LYS PRO ASP ILE PHE LYS ASP SER GLY SER THR LYS LYS SEQRES 11 C 170 TYR SER LEU ILE THR PHE GLY GLU SER ASN PHE CYS ASP SEQRES 12 C 170 PHE ASP LEU LYS PRO ILE LEU ALA VAL LEU LYS GLU GLY SEQRES 13 C 170 LYS VAL GLU ILE GLU LYS LEU GLU HIS HIS HIS HIS HIS SEQRES 14 C 170 HIS SEQRES 1 D 82 MET TRP ASN LYS ALA VAL ILE GLY ASP VAL ASN ALA ASP SEQRES 2 D 82 GLY VAL VAL ASN ILE SER ASP TYR VAL LEU MET LYS ARG SEQRES 3 D 82 TYR ILE LEU ARG ILE ILE ALA ASP PHE PRO ALA ASP ASP SEQRES 4 D 82 ASP MET TRP VAL GLY ASP VAL ASN GLY ASP ASN VAL ILE SEQRES 5 D 82 ASN ASP ILE ASP CYS ASN TYR LEU LYS ARG TYR LEU LEU SEQRES 6 D 82 HIS MET ILE ARG GLU PHE PRO LYS ASN SER TYR ASN SER SEQRES 7 D 82 ALA PRO THR PHE HET SO4 A 201 5 HET SO4 A 202 5 HET SO4 A 203 5 HET CA B 101 1 HET CA B 102 1 HET SO4 B 103 5 HET SO4 B 104 5 HET SO4 C 201 5 HET SO4 C 202 5 HET SO4 C 203 5 HET SO4 C 204 5 HET CA D 101 1 HET CA D 102 1 HETNAM SO4 SULFATE ION HETNAM CA CALCIUM ION FORMUL 5 SO4 9(O4 S 2-) FORMUL 8 CA 4(CA 2+) FORMUL 18 HOH *461(H2 O) HELIX 1 1 ASP A 73 ASN A 77 1 5 HELIX 2 2 TYR A 84 ASP A 86 5 3 HELIX 3 3 ASN B 17 LEU B 29 1 13 HELIX 4 4 ASP B 39 ASP B 45 1 7 HELIX 5 5 ASN B 53 LEU B 65 1 13 HELIX 6 6 ASP C 73 ASN C 77 1 5 HELIX 7 7 TYR C 84 ASP C 86 5 3 HELIX 8 8 ASN D 17 LEU D 29 1 13 HELIX 9 9 ASP D 39 ASP D 45 1 7 HELIX 10 10 ASN D 53 LEU D 65 1 13 SHEET 1 A 7 THR A 12 ALA A 13 0 SHEET 2 A 7 LYS C 129 CYS C 142 -1 O TYR C 131 N ALA A 13 SHEET 3 A 7 PRO C 148 LYS C 154 -1 O ILE C 149 N PHE C 141 SHEET 4 A 7 TYR C 15 VAL C 21 1 N LEU C 17 O VAL C 152 SHEET 5 A 7 THR C 31 GLU C 39 -1 O GLU C 39 N ASP C 18 SHEET 6 A 7 GLY C 108 ILE C 117 -1 O ALA C 111 N LEU C 36 SHEET 7 A 7 ILE C 60 PRO C 67 -1 N LEU C 63 O THR C 114 SHEET 1 B 6 VAL C 24 LYS C 27 0 SHEET 2 B 6 GLY C 156 GLU C 161 1 O GLU C 159 N VAL C 24 SHEET 3 B 6 LYS C 129 CYS C 142 -1 N LYS C 130 O ILE C 160 SHEET 4 B 6 SER C 48 TYR C 54 -1 N ASN C 50 O ASN C 140 SHEET 5 B 6 GLU C 88 ASP C 94 -1 O ILE C 89 N LEU C 53 SHEET 6 B 6 PHE C 78 VAL C 83 -1 N ASN C 81 O VAL C 90 SHEET 1 C 5 ILE A 60 PRO A 67 0 SHEET 2 C 5 GLY A 108 ILE A 117 -1 O THR A 114 N LEU A 63 SHEET 3 C 5 THR A 31 GLU A 39 -1 N ILE A 34 O LEU A 113 SHEET 4 C 5 TYR A 15 VAL A 21 -1 N ASP A 18 O GLU A 39 SHEET 5 C 5 ILE A 149 LYS A 154 1 O VAL A 152 N LEU A 17 SHEET 1 D 6 VAL A 24 LYS A 27 0 SHEET 2 D 6 GLY A 156 GLU A 161 1 O GLU A 159 N ALA A 26 SHEET 3 D 6 LYS A 129 CYS A 142 -1 N LYS A 130 O ILE A 160 SHEET 4 D 6 SER A 48 TYR A 54 -1 N ASN A 50 O ASN A 140 SHEET 5 D 6 GLU A 88 ASP A 94 -1 O PHE A 91 N LEU A 51 SHEET 6 D 6 PHE A 78 VAL A 83 -1 N ASN A 81 O VAL A 90 SHEET 1 E 4 VAL A 24 LYS A 27 0 SHEET 2 E 4 GLY A 156 GLU A 161 1 O GLU A 159 N ALA A 26 SHEET 3 E 4 LYS A 129 CYS A 142 -1 N LYS A 130 O ILE A 160 SHEET 4 E 4 THR C 12 ALA C 13 -1 O ALA C 13 N TYR A 131 LINK OD1 ASP B 9 CA CA B 101 1555 1555 2.39 LINK OD1 ASN B 11 CA CA B 101 1555 1555 2.29 LINK OD1 ASP B 13 CA CA B 101 1555 1555 2.44 LINK O VAL B 15 CA CA B 101 1555 1555 2.28 LINK OD2 ASP B 20 CA CA B 101 1555 1555 2.41 LINK OD1 ASP B 20 CA CA B 101 1555 1555 2.46 LINK OD1 ASP B 45 CA CA B 102 1555 1555 2.37 LINK OD1 ASN B 47 CA CA B 102 1555 1555 2.34 LINK OD1 ASP B 49 CA CA B 102 1555 1555 2.40 LINK O VAL B 51 CA CA B 102 1555 1555 2.30 LINK OD1 ASP B 56 CA CA B 102 1555 1555 2.50 LINK OD2 ASP B 56 CA CA B 102 1555 1555 2.52 LINK CA CA B 101 O HOH B 201 1555 1555 2.42 LINK CA CA B 102 O HOH B 202 1555 1555 2.30 LINK OD1 ASP D 9 CA CA D 101 1555 1555 2.39 LINK OD1 ASN D 11 CA CA D 101 1555 1555 2.36 LINK OD1 ASP D 13 CA CA D 101 1555 1555 2.52 LINK O VAL D 15 CA CA D 101 1555 1555 2.17 LINK OD2 ASP D 20 CA CA D 101 1555 1555 2.39 LINK OD1 ASP D 20 CA CA D 101 1555 1555 2.45 LINK OD1 ASP D 45 CA CA D 102 1555 1555 2.32 LINK OD1 ASN D 47 CA CA D 102 1555 1555 2.24 LINK OD1 ASP D 49 CA CA D 102 1555 1555 2.41 LINK O VAL D 51 CA CA D 102 1555 1555 2.34 LINK OD1 ASP D 56 CA CA D 102 1555 1555 2.44 LINK OD2 ASP D 56 CA CA D 102 1555 1555 2.45 LINK CA CA D 101 O HOH D 201 1555 1555 2.48 LINK CA CA D 102 O HOH D 202 1555 1555 2.36 SITE 1 AC1 10 ASP A 14 LYS A 147 HOH A 362 HOH A 443 SITE 2 AC1 10 HOH A 455 SER C 125 SER C 127 LYS C 130 SITE 3 AC1 10 HOH C 310 HOH C 450 SITE 1 AC2 6 ILE A 82 VAL A 83 TYR A 84 LYS A 85 SITE 2 AC2 6 HOH A 360 HOH A 409 SITE 1 AC3 3 ASP A 73 HOH A 385 HOH A 413 SITE 1 AC4 6 ASP B 9 ASN B 11 ASP B 13 VAL B 15 SITE 2 AC4 6 ASP B 20 HOH B 201 SITE 1 AC5 6 ASP B 45 ASN B 47 ASP B 49 VAL B 51 SITE 2 AC5 6 ASP B 56 HOH B 202 SITE 1 AC6 3 ASN B 47 TYR B 59 HOH B 263 SITE 1 AC7 4 ASN B 58 ARG B 62 MET B 67 HOH B 248 SITE 1 AC8 6 ILE C 82 VAL C 83 TYR C 84 LYS C 85 SITE 2 AC8 6 HOH C 372 HOH C 444 SITE 1 AC9 2 THR C 72 ASP C 73 SITE 1 BC1 4 LYS C 105 HOH C 334 HOH C 400 HOH C 419 SITE 1 BC2 8 SER A 125 SER A 127 LYS A 130 ASP C 14 SITE 2 BC2 8 LYS C 147 HOH C 403 HOH C 424 HOH C 458 SITE 1 BC3 6 ASP D 9 ASN D 11 ASP D 13 VAL D 15 SITE 2 BC3 6 ASP D 20 HOH D 201 SITE 1 BC4 6 ASP D 45 ASN D 47 ASP D 49 VAL D 51 SITE 2 BC4 6 ASP D 56 HOH D 202 CRYST1 90.760 90.760 135.070 90.00 90.00 120.00 P 32 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011018 0.006361 0.000000 0.00000 SCALE2 0.000000 0.012723 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007404 0.00000