HEADER TRANSFERASE 30-JAN-12 4DIE TITLE CRYSTAL STRUCTURE OF A CYTIDYLATE KINASE CMK FROM MYCOBACTERIUM TITLE 2 ABSCESSUS BOUND TO CYTIDINE-5'-MONOPHOSPHATE COMPND MOL_ID: 1; COMPND 2 MOLECULE: CYTIDYLATE KINASE; COMPND 3 CHAIN: A, B, C, D; COMPND 4 SYNONYM: CK, CYTIDINE MONOPHOSPHATE KINASE; COMPND 5 EC: 2.7.4.25; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM ABSCESSUS; SOURCE 3 ORGANISM_TAXID: 561007; SOURCE 4 STRAIN: ATCC 19977; SOURCE 5 GENE: CMK, MAB_2371; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PAVA0421 KEYWDS STRUCTURAL GENOMICS, SEATTLE STRUCTURAL GENOMICS CENTER FOR KEYWDS 2 INFECTIOUS DISEASE, SSGCID, KINASE, MYCOBACTERIUM, CYTIDINE KEYWDS 3 MONOPHOSPHATE KINASE, CK, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR SEATTLE STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE (SSGCID) REVDAT 4 13-SEP-23 4DIE 1 REMARK SEQADV REVDAT 3 15-APR-15 4DIE 1 JRNL REVDAT 2 11-MAR-15 4DIE 1 JRNL REVDAT 1 08-FEB-12 4DIE 0 JRNL AUTH L.BAUGH,I.PHAN,D.W.BEGLEY,M.C.CLIFTON,B.ARMOUR,D.M.DRANOW, JRNL AUTH 2 B.M.TAYLOR,M.M.MURUTHI,J.ABENDROTH,J.W.FAIRMAN,D.FOX, JRNL AUTH 3 S.H.DIETERICH,B.L.STAKER,A.S.GARDBERG,R.CHOI,S.N.HEWITT, JRNL AUTH 4 A.J.NAPULI,J.MYERS,L.K.BARRETT,Y.ZHANG,M.FERRELL,E.MUNDT, JRNL AUTH 5 K.THOMPKINS,N.TRAN,S.LYONS-ABBOTT,A.ABRAMOV,A.SEKAR, JRNL AUTH 6 D.SERBZHINSKIY,D.LORIMER,G.W.BUCHKO,R.STACY,L.J.STEWART, JRNL AUTH 7 T.E.EDWARDS,W.C.VAN VOORHIS,P.J.MYLER JRNL TITL INCREASING THE STRUCTURAL COVERAGE OF TUBERCULOSIS DRUG JRNL TITL 2 TARGETS. JRNL REF TUBERCULOSIS (EDINB) V. 95 142 2015 JRNL REFN ISSN 1472-9792 JRNL PMID 25613812 JRNL DOI 10.1016/J.TUBE.2014.12.003 REMARK 2 REMARK 2 RESOLUTION. 2.65 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.65 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.6 REMARK 3 NUMBER OF REFLECTIONS : 30247 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.233 REMARK 3 R VALUE (WORKING SET) : 0.231 REMARK 3 FREE R VALUE : 0.270 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1520 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.65 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.72 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2052 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.10 REMARK 3 BIN R VALUE (WORKING SET) : 0.3740 REMARK 3 BIN FREE R VALUE SET COUNT : 120 REMARK 3 BIN FREE R VALUE : 0.4260 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5758 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 104 REMARK 3 SOLVENT ATOMS : 144 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 42.89 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 39.02 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -3.02000 REMARK 3 B22 (A**2) : -0.66000 REMARK 3 B33 (A**2) : 3.67000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.08000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.715 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.335 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.249 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 23.447 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.930 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.899 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 5931 ; 0.010 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 3659 ; 0.005 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 8132 ; 1.472 ; 1.994 REMARK 3 BOND ANGLES OTHERS (DEGREES): 9013 ; 1.182 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 815 ; 4.997 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 207 ;32.981 ;24.493 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 863 ;13.607 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 46 ;21.774 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1036 ; 0.068 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 6721 ; 0.005 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 1069 ; 0.004 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 16 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A -1 A 103 REMARK 3 ORIGIN FOR THE GROUP (A): -18.0372 33.3539 -0.5169 REMARK 3 T TENSOR REMARK 3 T11: 0.0321 T22: 0.0772 REMARK 3 T33: 0.0342 T12: 0.0024 REMARK 3 T13: -0.0098 T23: 0.0051 REMARK 3 L TENSOR REMARK 3 L11: 2.5498 L22: 1.8161 REMARK 3 L33: 0.3702 L12: 0.2146 REMARK 3 L13: 0.5035 L23: 0.2717 REMARK 3 S TENSOR REMARK 3 S11: 0.0076 S12: -0.1101 S13: 0.1832 REMARK 3 S21: 0.0800 S22: -0.0203 S23: 0.0451 REMARK 3 S31: 0.0829 S32: -0.0738 S33: 0.0127 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 104 A 140 REMARK 3 ORIGIN FOR THE GROUP (A): -19.5045 42.7616 -8.5599 REMARK 3 T TENSOR REMARK 3 T11: 0.0384 T22: 0.1467 REMARK 3 T33: 0.1152 T12: -0.0025 REMARK 3 T13: -0.0483 T23: 0.0680 REMARK 3 L TENSOR REMARK 3 L11: 5.0683 L22: 4.8906 REMARK 3 L33: 1.1117 L12: 4.0248 REMARK 3 L13: 0.5153 L23: 0.7426 REMARK 3 S TENSOR REMARK 3 S11: -0.2463 S12: 0.4637 S13: 0.3614 REMARK 3 S21: -0.2856 S22: 0.1295 S23: 0.1931 REMARK 3 S31: -0.1446 S32: -0.2137 S33: 0.1168 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 141 A 194 REMARK 3 ORIGIN FOR THE GROUP (A): -0.9619 32.3538 -10.2670 REMARK 3 T TENSOR REMARK 3 T11: 0.1516 T22: 0.1689 REMARK 3 T33: 0.1857 T12: -0.0249 REMARK 3 T13: 0.0020 T23: 0.0127 REMARK 3 L TENSOR REMARK 3 L11: 3.5783 L22: 7.5762 REMARK 3 L33: 5.5374 L12: -2.5778 REMARK 3 L13: 4.4250 L23: -2.7765 REMARK 3 S TENSOR REMARK 3 S11: 0.6146 S12: 0.1698 S13: -0.1480 REMARK 3 S21: -0.3274 S22: -0.3510 S23: -0.7073 REMARK 3 S31: 0.7796 S32: 0.1295 S33: -0.2636 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 195 A 218 REMARK 3 ORIGIN FOR THE GROUP (A): 0.4763 48.2475 -3.6988 REMARK 3 T TENSOR REMARK 3 T11: 0.1249 T22: 0.1342 REMARK 3 T33: 0.2791 T12: -0.0486 REMARK 3 T13: -0.0473 T23: 0.0459 REMARK 3 L TENSOR REMARK 3 L11: 2.0824 L22: 2.8356 REMARK 3 L33: 4.2588 L12: 0.4766 REMARK 3 L13: 2.5619 L23: 2.1005 REMARK 3 S TENSOR REMARK 3 S11: -0.2077 S12: -0.0094 S13: 0.4518 REMARK 3 S21: -0.1820 S22: 0.0834 S23: -0.5201 REMARK 3 S31: -0.1626 S32: -0.0716 S33: 0.1243 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B -1 B 146 REMARK 3 ORIGIN FOR THE GROUP (A): -17.7314 -0.0678 -4.0371 REMARK 3 T TENSOR REMARK 3 T11: 0.0204 T22: 0.0492 REMARK 3 T33: 0.0731 T12: 0.0077 REMARK 3 T13: 0.0184 T23: 0.0054 REMARK 3 L TENSOR REMARK 3 L11: 1.5519 L22: 2.1397 REMARK 3 L33: 0.4277 L12: 0.8351 REMARK 3 L13: 0.0719 L23: -0.2050 REMARK 3 S TENSOR REMARK 3 S11: -0.0210 S12: -0.1284 S13: -0.1103 REMARK 3 S21: -0.0383 S22: -0.0392 S23: -0.1124 REMARK 3 S31: -0.0152 S32: 0.0690 S33: 0.0603 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 147 B 173 REMARK 3 ORIGIN FOR THE GROUP (A): -39.9159 5.6075 -4.8993 REMARK 3 T TENSOR REMARK 3 T11: 0.6513 T22: 0.2637 REMARK 3 T33: 0.4981 T12: -0.0885 REMARK 3 T13: 0.2209 T23: -0.0855 REMARK 3 L TENSOR REMARK 3 L11: 42.0227 L22: 20.3168 REMARK 3 L33: 5.0800 L12: -16.1375 REMARK 3 L13: 10.7632 L23: -9.8466 REMARK 3 S TENSOR REMARK 3 S11: 1.5276 S12: -0.2405 S13: 1.9844 REMARK 3 S21: 0.6207 S22: -1.2216 S23: 0.8633 REMARK 3 S31: -0.0310 S32: 0.3934 S33: -0.3059 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 174 B 187 REMARK 3 ORIGIN FOR THE GROUP (A): -27.5801 7.9501 -16.8213 REMARK 3 T TENSOR REMARK 3 T11: 1.6209 T22: 2.2976 REMARK 3 T33: 1.0643 T12: -0.7072 REMARK 3 T13: 0.0170 T23: 0.2192 REMARK 3 L TENSOR REMARK 3 L11: 2.5229 L22: 0.6410 REMARK 3 L33: 8.4128 L12: 0.8980 REMARK 3 L13: 4.3302 L23: 0.9824 REMARK 3 S TENSOR REMARK 3 S11: -0.8339 S12: 1.3161 S13: 0.1791 REMARK 3 S21: -0.5580 S22: 0.8868 S23: 0.1191 REMARK 3 S31: -0.2391 S32: 1.0858 S33: -0.0528 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 188 B 218 REMARK 3 ORIGIN FOR THE GROUP (A): -33.9366 -10.6533 -8.2070 REMARK 3 T TENSOR REMARK 3 T11: 0.0561 T22: 0.1103 REMARK 3 T33: 0.0559 T12: -0.0468 REMARK 3 T13: 0.0015 T23: -0.0165 REMARK 3 L TENSOR REMARK 3 L11: 5.6386 L22: 3.8720 REMARK 3 L33: 8.4105 L12: -0.7982 REMARK 3 L13: -4.5028 L23: -0.8085 REMARK 3 S TENSOR REMARK 3 S11: -0.3091 S12: 0.1499 S13: -0.2456 REMARK 3 S21: -0.0016 S22: 0.1215 S23: 0.1992 REMARK 3 S31: -0.0824 S32: -0.0520 S33: 0.1876 REMARK 3 REMARK 3 TLS GROUP : 9 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C -1 C 28 REMARK 3 ORIGIN FOR THE GROUP (A): -20.7535 34.0867 -39.4630 REMARK 3 T TENSOR REMARK 3 T11: 0.0184 T22: 0.0257 REMARK 3 T33: 0.1641 T12: -0.0133 REMARK 3 T13: -0.0055 T23: -0.0006 REMARK 3 L TENSOR REMARK 3 L11: 4.4287 L22: 3.2097 REMARK 3 L33: 3.0355 L12: 0.1516 REMARK 3 L13: 1.1246 L23: -1.0440 REMARK 3 S TENSOR REMARK 3 S11: -0.1722 S12: 0.3198 S13: 0.2103 REMARK 3 S21: -0.0969 S22: 0.0787 S23: -0.1314 REMARK 3 S31: 0.1346 S32: 0.0743 S33: 0.0935 REMARK 3 REMARK 3 TLS GROUP : 10 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 29 C 103 REMARK 3 ORIGIN FOR THE GROUP (A): -8.7691 17.8096 -39.2020 REMARK 3 T TENSOR REMARK 3 T11: 0.0516 T22: 0.0675 REMARK 3 T33: 0.0705 T12: -0.0143 REMARK 3 T13: 0.0049 T23: 0.0157 REMARK 3 L TENSOR REMARK 3 L11: 1.0935 L22: 2.5793 REMARK 3 L33: 0.4061 L12: -0.4493 REMARK 3 L13: -0.3303 L23: -0.3387 REMARK 3 S TENSOR REMARK 3 S11: -0.0498 S12: 0.2049 S13: 0.0352 REMARK 3 S21: -0.0322 S22: -0.0485 S23: -0.2765 REMARK 3 S31: 0.0380 S32: -0.0510 S33: 0.0983 REMARK 3 REMARK 3 TLS GROUP : 11 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 104 C 139 REMARK 3 ORIGIN FOR THE GROUP (A): -10.1606 32.0766 -31.5182 REMARK 3 T TENSOR REMARK 3 T11: 0.0842 T22: 0.0564 REMARK 3 T33: 0.1648 T12: -0.0213 REMARK 3 T13: -0.0785 T23: -0.0193 REMARK 3 L TENSOR REMARK 3 L11: 4.0853 L22: 4.1915 REMARK 3 L33: 1.5540 L12: -3.2024 REMARK 3 L13: -1.3283 L23: -0.0579 REMARK 3 S TENSOR REMARK 3 S11: -0.2112 S12: -0.2796 S13: 0.3649 REMARK 3 S21: 0.4630 S22: 0.1272 S23: -0.5440 REMARK 3 S31: -0.0466 S32: 0.0691 S33: 0.0841 REMARK 3 REMARK 3 TLS GROUP : 12 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 140 C 218 REMARK 3 ORIGIN FOR THE GROUP (A): -28.9035 28.2145 -32.0459 REMARK 3 T TENSOR REMARK 3 T11: 0.0447 T22: 0.1391 REMARK 3 T33: 0.1802 T12: 0.0643 REMARK 3 T13: 0.0096 T23: -0.0238 REMARK 3 L TENSOR REMARK 3 L11: 3.6403 L22: 2.0659 REMARK 3 L33: 3.0726 L12: 0.2427 REMARK 3 L13: 2.6985 L23: -0.8683 REMARK 3 S TENSOR REMARK 3 S11: 0.1091 S12: 0.0790 S13: -0.0833 REMARK 3 S21: 0.1610 S22: 0.0712 S23: 0.3616 REMARK 3 S31: 0.0920 S32: 0.2562 S33: -0.1803 REMARK 3 REMARK 3 TLS GROUP : 13 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D -1 D 144 REMARK 3 ORIGIN FOR THE GROUP (A): -13.0511 -10.8138 -34.6502 REMARK 3 T TENSOR REMARK 3 T11: 0.0360 T22: 0.0407 REMARK 3 T33: 0.0835 T12: -0.0054 REMARK 3 T13: 0.0213 T23: 0.0047 REMARK 3 L TENSOR REMARK 3 L11: 2.3702 L22: 2.7265 REMARK 3 L33: 0.1337 L12: -1.3323 REMARK 3 L13: -0.0276 L23: 0.4208 REMARK 3 S TENSOR REMARK 3 S11: -0.0365 S12: -0.0042 S13: -0.2356 REMARK 3 S21: 0.0870 S22: 0.0872 S23: 0.0391 REMARK 3 S31: -0.0257 S32: 0.0203 S33: -0.0508 REMARK 3 REMARK 3 TLS GROUP : 14 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 145 D 174 REMARK 3 ORIGIN FOR THE GROUP (A): 9.2133 -5.1263 -30.7575 REMARK 3 T TENSOR REMARK 3 T11: 0.1223 T22: 0.1705 REMARK 3 T33: 0.3903 T12: 0.0651 REMARK 3 T13: 0.0270 T23: 0.0253 REMARK 3 L TENSOR REMARK 3 L11: 18.0147 L22: 20.6338 REMARK 3 L33: 44.5940 L12: -0.3038 REMARK 3 L13: -12.5872 L23: 7.1167 REMARK 3 S TENSOR REMARK 3 S11: 0.8967 S12: 1.3389 S13: -0.2848 REMARK 3 S21: -0.2883 S22: -1.0431 S23: -2.0466 REMARK 3 S31: -0.8353 S32: -1.1761 S33: 0.1464 REMARK 3 REMARK 3 TLS GROUP : 15 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 175 D 183 REMARK 3 ORIGIN FOR THE GROUP (A): -0.5228 -1.6723 -21.2199 REMARK 3 T TENSOR REMARK 3 T11: 0.4903 T22: 0.5350 REMARK 3 T33: 0.4934 T12: -0.0750 REMARK 3 T13: 0.0491 T23: -0.2989 REMARK 3 L TENSOR REMARK 3 L11: 18.1984 L22: 39.2067 REMARK 3 L33: 1.5354 L12: 4.3978 REMARK 3 L13: -1.5158 L23: -7.6962 REMARK 3 S TENSOR REMARK 3 S11: 1.5028 S12: -0.9547 S13: 0.8750 REMARK 3 S21: 1.7934 S22: -1.5648 S23: -0.2610 REMARK 3 S31: -0.3898 S32: 0.3544 S33: 0.0620 REMARK 3 REMARK 3 TLS GROUP : 16 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 184 D 218 REMARK 3 ORIGIN FOR THE GROUP (A): 2.2387 -20.1696 -29.4203 REMARK 3 T TENSOR REMARK 3 T11: 0.1239 T22: 0.0959 REMARK 3 T33: 0.1274 T12: 0.0832 REMARK 3 T13: -0.0582 T23: -0.0102 REMARK 3 L TENSOR REMARK 3 L11: 3.3177 L22: 4.4018 REMARK 3 L33: 0.7917 L12: 0.0869 REMARK 3 L13: -1.5566 L23: 0.4788 REMARK 3 S TENSOR REMARK 3 S11: -0.3872 S12: -0.1913 S13: -0.1622 REMARK 3 S21: 0.5034 S22: 0.3713 S23: -0.5294 REMARK 3 S31: 0.2430 S32: 0.1338 S33: 0.0159 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: U VALUES : WITH TLS ADDED HYDROGENS REMARK 3 HAVE BEEN ADDED IN THE RIDING POSITIONS REMARK 4 REMARK 4 4DIE COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 31-JAN-12. REMARK 100 THE DEPOSITION ID IS D_1000070367. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 26-MAR-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 5.0.3 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.976 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 30247 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.650 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.6 REMARK 200 DATA REDUNDANCY : 4.300 REMARK 200 R MERGE (I) : 0.08600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 16.5600 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.65 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.72 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.2 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.54100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.070 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.1.4 REMARK 200 STARTING MODEL: PDB ENTRY 3R8C REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 56.01 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.80 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: MYABA.00663.A.A1 PW30208 AT 27.9 MG/ML REMARK 280 WITH 4 MM C5P AND 4 MM ADP AGAINST JCSG+ SCREEN CONDITION E1, REMARK 280 0.1 M SODIUM CACODYLATE PH 6.5, 1 M TRISODIUM CITRATE WITH 25% REMARK 280 ETHYLENE GLYCOL AS CRYO-PROTECTANT, CRYSTAL TRACKING ID 220703E1, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 48.26000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4, 5, 6 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 5 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 6 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -4 REMARK 465 PRO A -3 REMARK 465 GLY A -2 REMARK 465 VAL A 158 REMARK 465 SER A 159 REMARK 465 GLY A 160 REMARK 465 GLY A 161 REMARK 465 GLY A 162 REMARK 465 ASP A 163 REMARK 465 ASP A 164 REMARK 465 GLU A 165 REMARK 465 TYR A 166 REMARK 465 GLU A 167 REMARK 465 LYS A 168 REMARK 465 ALA A 184 REMARK 465 VAL A 185 REMARK 465 SER A 186 REMARK 465 PRO A 187 REMARK 465 ARG A 218 REMARK 465 ALA A 219 REMARK 465 GLY A 220 REMARK 465 ALA A 221 REMARK 465 SER A 222 REMARK 465 ARG A 223 REMARK 465 GLY B -4 REMARK 465 PRO B -3 REMARK 465 GLY B -2 REMARK 465 ALA B 155 REMARK 465 GLN B 156 REMARK 465 ASN B 157 REMARK 465 VAL B 158 REMARK 465 SER B 159 REMARK 465 GLY B 160 REMARK 465 GLY B 161 REMARK 465 GLY B 162 REMARK 465 ASP B 163 REMARK 465 ASP B 164 REMARK 465 GLU B 165 REMARK 465 TYR B 166 REMARK 465 GLU B 167 REMARK 465 LYS B 168 REMARK 465 VAL B 169 REMARK 465 LEU B 170 REMARK 465 ALA B 171 REMARK 465 ASP B 172 REMARK 465 VAL B 173 REMARK 465 ALA B 219 REMARK 465 GLY B 220 REMARK 465 ALA B 221 REMARK 465 SER B 222 REMARK 465 ARG B 223 REMARK 465 GLY C -4 REMARK 465 PRO C -3 REMARK 465 GLY C -2 REMARK 465 GLY C 160 REMARK 465 GLY C 161 REMARK 465 GLY C 162 REMARK 465 ASP C 163 REMARK 465 ASP C 164 REMARK 465 GLU C 165 REMARK 465 TYR C 166 REMARK 465 ALA C 219 REMARK 465 GLY C 220 REMARK 465 ALA C 221 REMARK 465 SER C 222 REMARK 465 ARG C 223 REMARK 465 GLY D -4 REMARK 465 PRO D -3 REMARK 465 GLY D -2 REMARK 465 ARG D 153 REMARK 465 ASN D 154 REMARK 465 ALA D 155 REMARK 465 GLN D 156 REMARK 465 ASN D 157 REMARK 465 VAL D 158 REMARK 465 SER D 159 REMARK 465 GLY D 160 REMARK 465 GLY D 161 REMARK 465 GLY D 162 REMARK 465 ASP D 163 REMARK 465 ASP D 164 REMARK 465 GLU D 165 REMARK 465 TYR D 166 REMARK 465 GLU D 167 REMARK 465 LYS D 168 REMARK 465 VAL D 169 REMARK 465 LEU D 170 REMARK 465 ALA D 171 REMARK 465 ASP D 172 REMARK 465 ALA D 219 REMARK 465 GLY D 220 REMARK 465 ALA D 221 REMARK 465 SER D 222 REMARK 465 ARG D 223 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 116 CG CD OE1 OE2 REMARK 470 ARG A 152 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 153 CG CD NE CZ NH1 NH2 REMARK 470 ASN A 154 CG OD1 ND2 REMARK 470 GLN A 156 CG CD OE1 NE2 REMARK 470 ASN A 157 CG OD1 ND2 REMARK 470 VAL A 169 CG1 CG2 REMARK 470 LEU A 170 CG CD1 CD2 REMARK 470 ASP A 172 CG OD1 OD2 REMARK 470 VAL A 173 CG1 CG2 REMARK 470 ARG A 175 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 176 CG CD NE CZ NH1 NH2 REMARK 470 LEU A 179 CG CD1 CD2 REMARK 470 ASP A 180 CG OD1 OD2 REMARK 470 SER A 181 OG REMARK 470 THR A 182 OG1 CG2 REMARK 470 ARG A 183 CG CD NE CZ NH1 NH2 REMARK 470 LEU A 188 CG CD1 CD2 REMARK 470 ARG A 189 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 192 CG CD OE1 OE2 REMARK 470 GLU B 116 CG CD OE1 OE2 REMARK 470 ARG B 152 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 153 CG CD NE CZ NH1 NH2 REMARK 470 ASN B 154 CG OD1 ND2 REMARK 470 GLN B 174 CG CD OE1 NE2 REMARK 470 ARG B 175 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 176 CG CD NE CZ NH1 NH2 REMARK 470 HIS B 178 CG ND1 CD2 CE1 NE2 REMARK 470 LEU B 179 CG CD1 CD2 REMARK 470 THR B 182 OG1 CG2 REMARK 470 ARG B 183 CG CD NE CZ NH1 NH2 REMARK 470 VAL B 185 CG1 CG2 REMARK 470 GLU B 192 CG CD OE1 OE2 REMARK 470 ARG B 218 CG CD NE CZ NH1 NH2 REMARK 470 GLN C 151 CG CD OE1 NE2 REMARK 470 ARG C 152 CG CD NE CZ NH1 NH2 REMARK 470 ARG C 153 CG CD NE CZ NH1 NH2 REMARK 470 ASN C 154 CG OD1 ND2 REMARK 470 GLN C 156 CG CD OE1 NE2 REMARK 470 ASN C 157 CG OD1 ND2 REMARK 470 VAL C 158 CG1 CG2 REMARK 470 SER C 159 OG REMARK 470 GLU C 167 CG CD OE1 OE2 REMARK 470 LYS C 168 CG CD CE NZ REMARK 470 LEU C 170 CG CD1 CD2 REMARK 470 ASP C 172 CG OD1 OD2 REMARK 470 VAL C 173 CG1 CG2 REMARK 470 GLN C 174 CG CD OE1 NE2 REMARK 470 ARG C 175 CG CD NE CZ NH1 NH2 REMARK 470 ARG C 176 CG CD NE CZ NH1 NH2 REMARK 470 HIS C 178 CG ND1 CD2 CE1 NE2 REMARK 470 LEU C 179 CG CD1 CD2 REMARK 470 SER C 181 OG REMARK 470 THR C 182 OG1 CG2 REMARK 470 ARG C 183 CG CD NE CZ NH1 NH2 REMARK 470 SER C 186 OG REMARK 470 ARG C 189 CG CD NE CZ NH1 NH2 REMARK 470 GLU C 192 CG CD OE1 OE2 REMARK 470 ARG C 218 CG CD NE CZ NH1 NH2 REMARK 470 GLU D 116 CG CD OE1 OE2 REMARK 470 ARG D 152 CG CD NE CZ NH1 NH2 REMARK 470 VAL D 173 CG1 CG2 REMARK 470 GLN D 174 CG CD OE1 NE2 REMARK 470 ARG D 175 CG CD NE CZ NH1 NH2 REMARK 470 ARG D 176 CG CD NE CZ NH1 NH2 REMARK 470 LEU D 179 CG CD1 CD2 REMARK 470 ARG D 183 CG CD NE CZ NH1 NH2 REMARK 470 ARG D 189 CG CD NE CZ NH1 NH2 REMARK 470 GLU D 192 CG CD OE1 OE2 REMARK 470 GLN D 204 CG CD OE1 NE2 REMARK 470 ARG D 218 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NH1 ARG D 21 OD1 ASP D 70 2.01 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER D 186 74.65 41.66 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE C5P A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE C5P B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 B 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE C5P C 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 C 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE C5P D 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 D 302 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3R8C RELATED DB: PDB REMARK 900 APO STRUCTURE M. ABSCESSUS REMARK 900 RELATED ID: 3R20 RELATED DB: PDB REMARK 900 INORGANIC PYROPHOSPHATE BOUND M. SMEGMATIS REMARK 900 RELATED ID: MYABA.00663.A RELATED DB: TARGETTRACK DBREF 4DIE A 2 223 UNP B1MB31 B1MB31_MYCA9 2 223 DBREF 4DIE B 2 223 UNP B1MB31 B1MB31_MYCA9 2 223 DBREF 4DIE C 2 223 UNP B1MB31 B1MB31_MYCA9 2 223 DBREF 4DIE D 2 223 UNP B1MB31 B1MB31_MYCA9 2 223 SEQADV 4DIE GLY A -4 UNP B1MB31 EXPRESSION TAG SEQADV 4DIE PRO A -3 UNP B1MB31 EXPRESSION TAG SEQADV 4DIE GLY A -2 UNP B1MB31 EXPRESSION TAG SEQADV 4DIE SER A -1 UNP B1MB31 EXPRESSION TAG SEQADV 4DIE MET A 0 UNP B1MB31 EXPRESSION TAG SEQADV 4DIE VAL A 1 UNP B1MB31 EXPRESSION TAG SEQADV 4DIE GLY B -4 UNP B1MB31 EXPRESSION TAG SEQADV 4DIE PRO B -3 UNP B1MB31 EXPRESSION TAG SEQADV 4DIE GLY B -2 UNP B1MB31 EXPRESSION TAG SEQADV 4DIE SER B -1 UNP B1MB31 EXPRESSION TAG SEQADV 4DIE MET B 0 UNP B1MB31 EXPRESSION TAG SEQADV 4DIE VAL B 1 UNP B1MB31 EXPRESSION TAG SEQADV 4DIE GLY C -4 UNP B1MB31 EXPRESSION TAG SEQADV 4DIE PRO C -3 UNP B1MB31 EXPRESSION TAG SEQADV 4DIE GLY C -2 UNP B1MB31 EXPRESSION TAG SEQADV 4DIE SER C -1 UNP B1MB31 EXPRESSION TAG SEQADV 4DIE MET C 0 UNP B1MB31 EXPRESSION TAG SEQADV 4DIE VAL C 1 UNP B1MB31 EXPRESSION TAG SEQADV 4DIE GLY D -4 UNP B1MB31 EXPRESSION TAG SEQADV 4DIE PRO D -3 UNP B1MB31 EXPRESSION TAG SEQADV 4DIE GLY D -2 UNP B1MB31 EXPRESSION TAG SEQADV 4DIE SER D -1 UNP B1MB31 EXPRESSION TAG SEQADV 4DIE MET D 0 UNP B1MB31 EXPRESSION TAG SEQADV 4DIE VAL D 1 UNP B1MB31 EXPRESSION TAG SEQRES 1 A 228 GLY PRO GLY SER MET VAL VAL ALA VAL ASP GLY PRO SER SEQRES 2 A 228 GLY THR GLY LYS SER SER VAL ALA LYS GLU LEU ALA ARG SEQRES 3 A 228 GLN LEU GLY ALA SER TYR LEU ASP THR GLY ALA MET TYR SEQRES 4 A 228 ARG ILE VAL THR LEU TRP VAL LEU ARG ALA GLY VAL ASP SEQRES 5 A 228 LEU THR ASP PRO ALA ALA ILE ALA ALA ALA THR ASP GLN SEQRES 6 A 228 VAL PRO MET SER VAL SER SER ASP PRO ASP ALA GLN THR SEQRES 7 A 228 ALA LEU LEU ALA GLY GLU ASP VAL SER VAL PRO ILE ARG SEQRES 8 A 228 GLY ASN GLU VAL THR GLY ALA VAL SER ALA VAL SER ALA SEQRES 9 A 228 VAL PRO ALA VAL ARG GLU ARG LEU VAL ARG GLN GLN ARG SEQRES 10 A 228 GLU LEU ALA GLU SER SER GLY ALA VAL VAL VAL GLU GLY SEQRES 11 A 228 ARG ASP ILE GLY THR VAL VAL LEU PRO ASP ALA ASP VAL SEQRES 12 A 228 LYS ILE TYR LEU THR ALA SER ALA GLN ALA ARG ALA GLN SEQRES 13 A 228 ARG ARG ASN ALA GLN ASN VAL SER GLY GLY GLY ASP ASP SEQRES 14 A 228 GLU TYR GLU LYS VAL LEU ALA ASP VAL GLN ARG ARG ASP SEQRES 15 A 228 HIS LEU ASP SER THR ARG ALA VAL SER PRO LEU ARG PRO SEQRES 16 A 228 ALA GLU ASP ALA LEU GLU VAL ASP THR SER ASP MET THR SEQRES 17 A 228 GLN GLU GLN VAL VAL ALA HIS LEU LEU ASP LEU VAL ARG SEQRES 18 A 228 THR ARG ALA GLY ALA SER ARG SEQRES 1 B 228 GLY PRO GLY SER MET VAL VAL ALA VAL ASP GLY PRO SER SEQRES 2 B 228 GLY THR GLY LYS SER SER VAL ALA LYS GLU LEU ALA ARG SEQRES 3 B 228 GLN LEU GLY ALA SER TYR LEU ASP THR GLY ALA MET TYR SEQRES 4 B 228 ARG ILE VAL THR LEU TRP VAL LEU ARG ALA GLY VAL ASP SEQRES 5 B 228 LEU THR ASP PRO ALA ALA ILE ALA ALA ALA THR ASP GLN SEQRES 6 B 228 VAL PRO MET SER VAL SER SER ASP PRO ASP ALA GLN THR SEQRES 7 B 228 ALA LEU LEU ALA GLY GLU ASP VAL SER VAL PRO ILE ARG SEQRES 8 B 228 GLY ASN GLU VAL THR GLY ALA VAL SER ALA VAL SER ALA SEQRES 9 B 228 VAL PRO ALA VAL ARG GLU ARG LEU VAL ARG GLN GLN ARG SEQRES 10 B 228 GLU LEU ALA GLU SER SER GLY ALA VAL VAL VAL GLU GLY SEQRES 11 B 228 ARG ASP ILE GLY THR VAL VAL LEU PRO ASP ALA ASP VAL SEQRES 12 B 228 LYS ILE TYR LEU THR ALA SER ALA GLN ALA ARG ALA GLN SEQRES 13 B 228 ARG ARG ASN ALA GLN ASN VAL SER GLY GLY GLY ASP ASP SEQRES 14 B 228 GLU TYR GLU LYS VAL LEU ALA ASP VAL GLN ARG ARG ASP SEQRES 15 B 228 HIS LEU ASP SER THR ARG ALA VAL SER PRO LEU ARG PRO SEQRES 16 B 228 ALA GLU ASP ALA LEU GLU VAL ASP THR SER ASP MET THR SEQRES 17 B 228 GLN GLU GLN VAL VAL ALA HIS LEU LEU ASP LEU VAL ARG SEQRES 18 B 228 THR ARG ALA GLY ALA SER ARG SEQRES 1 C 228 GLY PRO GLY SER MET VAL VAL ALA VAL ASP GLY PRO SER SEQRES 2 C 228 GLY THR GLY LYS SER SER VAL ALA LYS GLU LEU ALA ARG SEQRES 3 C 228 GLN LEU GLY ALA SER TYR LEU ASP THR GLY ALA MET TYR SEQRES 4 C 228 ARG ILE VAL THR LEU TRP VAL LEU ARG ALA GLY VAL ASP SEQRES 5 C 228 LEU THR ASP PRO ALA ALA ILE ALA ALA ALA THR ASP GLN SEQRES 6 C 228 VAL PRO MET SER VAL SER SER ASP PRO ASP ALA GLN THR SEQRES 7 C 228 ALA LEU LEU ALA GLY GLU ASP VAL SER VAL PRO ILE ARG SEQRES 8 C 228 GLY ASN GLU VAL THR GLY ALA VAL SER ALA VAL SER ALA SEQRES 9 C 228 VAL PRO ALA VAL ARG GLU ARG LEU VAL ARG GLN GLN ARG SEQRES 10 C 228 GLU LEU ALA GLU SER SER GLY ALA VAL VAL VAL GLU GLY SEQRES 11 C 228 ARG ASP ILE GLY THR VAL VAL LEU PRO ASP ALA ASP VAL SEQRES 12 C 228 LYS ILE TYR LEU THR ALA SER ALA GLN ALA ARG ALA GLN SEQRES 13 C 228 ARG ARG ASN ALA GLN ASN VAL SER GLY GLY GLY ASP ASP SEQRES 14 C 228 GLU TYR GLU LYS VAL LEU ALA ASP VAL GLN ARG ARG ASP SEQRES 15 C 228 HIS LEU ASP SER THR ARG ALA VAL SER PRO LEU ARG PRO SEQRES 16 C 228 ALA GLU ASP ALA LEU GLU VAL ASP THR SER ASP MET THR SEQRES 17 C 228 GLN GLU GLN VAL VAL ALA HIS LEU LEU ASP LEU VAL ARG SEQRES 18 C 228 THR ARG ALA GLY ALA SER ARG SEQRES 1 D 228 GLY PRO GLY SER MET VAL VAL ALA VAL ASP GLY PRO SER SEQRES 2 D 228 GLY THR GLY LYS SER SER VAL ALA LYS GLU LEU ALA ARG SEQRES 3 D 228 GLN LEU GLY ALA SER TYR LEU ASP THR GLY ALA MET TYR SEQRES 4 D 228 ARG ILE VAL THR LEU TRP VAL LEU ARG ALA GLY VAL ASP SEQRES 5 D 228 LEU THR ASP PRO ALA ALA ILE ALA ALA ALA THR ASP GLN SEQRES 6 D 228 VAL PRO MET SER VAL SER SER ASP PRO ASP ALA GLN THR SEQRES 7 D 228 ALA LEU LEU ALA GLY GLU ASP VAL SER VAL PRO ILE ARG SEQRES 8 D 228 GLY ASN GLU VAL THR GLY ALA VAL SER ALA VAL SER ALA SEQRES 9 D 228 VAL PRO ALA VAL ARG GLU ARG LEU VAL ARG GLN GLN ARG SEQRES 10 D 228 GLU LEU ALA GLU SER SER GLY ALA VAL VAL VAL GLU GLY SEQRES 11 D 228 ARG ASP ILE GLY THR VAL VAL LEU PRO ASP ALA ASP VAL SEQRES 12 D 228 LYS ILE TYR LEU THR ALA SER ALA GLN ALA ARG ALA GLN SEQRES 13 D 228 ARG ARG ASN ALA GLN ASN VAL SER GLY GLY GLY ASP ASP SEQRES 14 D 228 GLU TYR GLU LYS VAL LEU ALA ASP VAL GLN ARG ARG ASP SEQRES 15 D 228 HIS LEU ASP SER THR ARG ALA VAL SER PRO LEU ARG PRO SEQRES 16 D 228 ALA GLU ASP ALA LEU GLU VAL ASP THR SER ASP MET THR SEQRES 17 D 228 GLN GLU GLN VAL VAL ALA HIS LEU LEU ASP LEU VAL ARG SEQRES 18 D 228 THR ARG ALA GLY ALA SER ARG HET C5P A 301 21 HET PO4 A 302 5 HET C5P B 301 21 HET PO4 B 302 5 HET C5P C 301 21 HET PO4 C 302 5 HET C5P D 301 21 HET PO4 D 302 5 HETNAM C5P CYTIDINE-5'-MONOPHOSPHATE HETNAM PO4 PHOSPHATE ION FORMUL 5 C5P 4(C9 H14 N3 O8 P) FORMUL 6 PO4 4(O4 P 3-) FORMUL 13 HOH *144(H2 O) HELIX 1 1 GLY A 11 LEU A 23 1 13 HELIX 2 2 THR A 30 GLY A 45 1 16 HELIX 3 3 ASP A 50 THR A 58 1 9 HELIX 4 4 VAL A 83 ARG A 86 5 4 HELIX 5 5 GLY A 87 ALA A 99 1 13 HELIX 6 6 VAL A 100 SER A 117 1 18 HELIX 7 7 SER A 145 ASN A 157 1 13 HELIX 8 8 LEU A 170 THR A 182 1 13 HELIX 9 9 THR A 203 ARG A 216 1 14 HELIX 10 10 GLY B 11 LEU B 23 1 13 HELIX 11 11 THR B 30 GLY B 45 1 16 HELIX 12 12 ASP B 50 THR B 58 1 9 HELIX 13 13 VAL B 83 ARG B 86 5 4 HELIX 14 14 GLY B 87 ALA B 99 1 13 HELIX 15 15 VAL B 100 SER B 117 1 18 HELIX 16 16 SER B 145 ASN B 154 1 10 HELIX 17 17 ARG B 175 THR B 182 1 8 HELIX 18 18 THR B 203 ARG B 216 1 14 HELIX 19 19 GLY C 11 LEU C 23 1 13 HELIX 20 20 THR C 30 GLY C 45 1 16 HELIX 21 21 ASP C 50 THR C 58 1 9 HELIX 22 22 VAL C 83 ARG C 86 5 4 HELIX 23 23 GLY C 87 ALA C 99 1 13 HELIX 24 24 VAL C 100 SER C 117 1 18 HELIX 25 25 SER C 145 VAL C 158 1 14 HELIX 26 26 LYS C 168 THR C 182 1 15 HELIX 27 27 THR C 203 ARG C 216 1 14 HELIX 28 28 GLY D 11 LEU D 23 1 13 HELIX 29 29 THR D 30 GLY D 45 1 16 HELIX 30 30 ASP D 50 THR D 58 1 9 HELIX 31 31 VAL D 83 ARG D 86 5 4 HELIX 32 32 GLY D 87 ALA D 99 1 13 HELIX 33 33 VAL D 100 SER D 117 1 18 HELIX 34 34 SER D 145 ARG D 152 1 8 HELIX 35 35 GLN D 174 THR D 182 1 9 HELIX 36 36 THR D 203 ARG D 216 1 14 SHEET 1 A 5 SER A 26 ASP A 29 0 SHEET 2 A 5 VAL A 121 GLY A 125 1 O VAL A 122 N SER A 26 SHEET 3 A 5 VAL A 1 ASP A 5 1 N VAL A 2 O VAL A 123 SHEET 4 A 5 VAL A 138 THR A 143 1 O ILE A 140 N ASP A 5 SHEET 5 A 5 LEU A 195 ASP A 198 1 O LEU A 195 N LYS A 139 SHEET 1 B 3 MET A 63 VAL A 65 0 SHEET 2 B 3 ALA A 74 LEU A 76 -1 O LEU A 75 N SER A 64 SHEET 3 B 3 GLU A 79 ASP A 80 -1 O GLU A 79 N LEU A 76 SHEET 1 C 5 SER B 26 ASP B 29 0 SHEET 2 C 5 VAL B 121 GLY B 125 1 O VAL B 122 N SER B 26 SHEET 3 C 5 VAL B 1 ASP B 5 1 N VAL B 2 O VAL B 123 SHEET 4 C 5 VAL B 138 THR B 143 1 O ILE B 140 N ALA B 3 SHEET 5 C 5 LEU B 195 ASP B 198 1 O VAL B 197 N THR B 143 SHEET 1 D 3 MET B 63 VAL B 65 0 SHEET 2 D 3 ALA B 74 LEU B 76 -1 O LEU B 75 N SER B 64 SHEET 3 D 3 GLU B 79 ASP B 80 -1 O GLU B 79 N LEU B 76 SHEET 1 E 5 SER C 26 ASP C 29 0 SHEET 2 E 5 VAL C 121 GLY C 125 1 O VAL C 122 N SER C 26 SHEET 3 E 5 VAL C 1 ASP C 5 1 N VAL C 2 O VAL C 123 SHEET 4 E 5 VAL C 138 THR C 143 1 O ILE C 140 N ASP C 5 SHEET 5 E 5 LEU C 195 ASP C 198 1 O LEU C 195 N LYS C 139 SHEET 1 F 3 MET C 63 VAL C 65 0 SHEET 2 F 3 ALA C 74 LEU C 76 -1 O LEU C 75 N SER C 64 SHEET 3 F 3 GLU C 79 ASP C 80 -1 O GLU C 79 N LEU C 76 SHEET 1 G 5 SER D 26 ASP D 29 0 SHEET 2 G 5 VAL D 121 GLY D 125 1 O VAL D 122 N SER D 26 SHEET 3 G 5 VAL D 1 ASP D 5 1 N VAL D 2 O VAL D 123 SHEET 4 G 5 VAL D 138 THR D 143 1 O ILE D 140 N ASP D 5 SHEET 5 G 5 LEU D 195 ASP D 198 1 O LEU D 195 N LYS D 139 SHEET 1 H 3 MET D 63 VAL D 65 0 SHEET 2 H 3 ALA D 74 LEU D 76 -1 O LEU D 75 N SER D 64 SHEET 3 H 3 GLU D 79 ASP D 80 -1 O GLU D 79 N LEU D 76 SITE 1 AC1 11 THR A 30 GLY A 31 TYR A 34 ARG A 35 SITE 2 AC1 11 ARG A 86 VAL A 94 SER A 95 SER A 98 SITE 3 AC1 11 ARG A 104 ARG A 126 ASP A 127 SITE 1 AC2 6 GLY A 9 THR A 10 GLY A 11 LYS A 12 SITE 2 AC2 6 SER A 13 HOH A 412 SITE 1 AC3 12 THR B 30 GLY B 31 TYR B 34 ARG B 35 SITE 2 AC3 12 VAL B 94 SER B 95 SER B 98 ARG B 104 SITE 3 AC3 12 GLY B 125 ARG B 126 ASP B 127 HOH B 425 SITE 1 AC4 5 SER B 8 GLY B 9 THR B 10 GLY B 11 SITE 2 AC4 5 LYS B 12 SITE 1 AC5 10 THR C 30 GLY C 31 TYR C 34 ARG C 35 SITE 2 AC5 10 VAL C 94 SER C 95 SER C 98 ARG C 104 SITE 3 AC5 10 ARG C 126 ASP C 127 SITE 1 AC6 4 GLY C 9 GLY C 11 LYS C 12 SER C 13 SITE 1 AC7 12 THR D 30 GLY D 31 TYR D 34 ARG D 35 SITE 2 AC7 12 VAL D 94 SER D 95 SER D 98 ARG D 104 SITE 3 AC7 12 ARG D 126 ASP D 127 HOH D 410 HOH D 435 SITE 1 AC8 7 SER D 8 GLY D 9 THR D 10 GLY D 11 SITE 2 AC8 7 LYS D 12 SER D 13 HOH D 417 CRYST1 70.760 96.520 78.790 90.00 97.22 90.00 P 1 21 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014132 0.000000 0.001789 0.00000 SCALE2 0.000000 0.010361 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012793 0.00000