data_4DIJ # _entry.id 4DIJ # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.389 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4DIJ pdb_00004dij 10.2210/pdb4dij/pdb RCSB RCSB070372 ? ? WWPDB D_1000070372 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2012-05-02 2 'Structure model' 1 1 2012-05-23 3 'Structure model' 1 2 2017-11-15 4 'Structure model' 1 3 2024-02-28 5 'Structure model' 1 4 2024-04-03 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Refinement description' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' 6 5 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' software 2 4 'Structure model' chem_comp_atom 3 4 'Structure model' chem_comp_bond 4 4 'Structure model' database_2 5 4 'Structure model' struct_ref_seq_dif 6 4 'Structure model' struct_site 7 5 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_software.name' 2 4 'Structure model' '_database_2.pdbx_DOI' 3 4 'Structure model' '_database_2.pdbx_database_accession' 4 4 'Structure model' '_struct_ref_seq_dif.details' 5 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 6 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 7 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4DIJ _pdbx_database_status.recvd_initial_deposition_date 2012-01-31 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 1YCR _pdbx_database_related.details 'CRYSTAL STRUCTURE OF HUMAN MDM2 WITH P53' _pdbx_database_related.content_type unspecified # _audit_author.name 'Kallen, J.' _audit_author.pdbx_ordinal 1 # _citation.id primary _citation.title 'The central valine concept provides an entry in a new class of non peptide inhibitors of the p53-MDM2 interaction.' _citation.journal_abbrev Bioorg.Med.Chem.Lett. _citation.journal_volume 22 _citation.page_first 3498 _citation.page_last 3502 _citation.year 2012 _citation.journal_id_ASTM BMCLE8 _citation.country UK _citation.journal_id_ISSN 0960-894X _citation.journal_id_CSD 1127 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 22507962 _citation.pdbx_database_id_DOI 10.1016/j.bmcl.2012.03.083 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Furet, P.' 1 ? primary 'Chene, P.' 2 ? primary 'De Pover, A.' 3 ? primary 'Valat, T.S.' 4 ? primary 'Lisztwan, J.H.' 5 ? primary 'Kallen, J.' 6 ? primary 'Masuya, K.' 7 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'E3 ubiquitin-protein ligase Mdm2' 11172.008 2 6.3.2.- L33E 'N-TERMINAL DOMAIN, P53-BINDING DOMAIN, UNP RESIDUES 17-111' ? 2 non-polymer syn '6-chloro-3-[1-(4-chlorobenzyl)-4-phenyl-1H-imidazol-5-yl]-N-[2-(morpholin-4-yl)ethyl]-1H-indole-2-carboxamide' 574.500 2 ? ? ? ? 3 water nat water 18.015 201 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Double minute 2 protein, Hdm2, Oncoprotein Mdm2, p53-binding protein Mdm2' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSQIPASEQETLVRPKPELLKLLKSVGAQKDTYTMKEVLFYLGQYIMTKRLYDEKQQHIVYCSNDLLGDLFGVPSFSVKE HRKIYTMIYRNLVVVN ; _entity_poly.pdbx_seq_one_letter_code_can ;GSQIPASEQETLVRPKPELLKLLKSVGAQKDTYTMKEVLFYLGQYIMTKRLYDEKQQHIVYCSNDLLGDLFGVPSFSVKE HRKIYTMIYRNLVVVN ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 '6-chloro-3-[1-(4-chlorobenzyl)-4-phenyl-1H-imidazol-5-yl]-N-[2-(morpholin-4-yl)ethyl]-1H-indole-2-carboxamide' BLF 3 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 GLN n 1 4 ILE n 1 5 PRO n 1 6 ALA n 1 7 SER n 1 8 GLU n 1 9 GLN n 1 10 GLU n 1 11 THR n 1 12 LEU n 1 13 VAL n 1 14 ARG n 1 15 PRO n 1 16 LYS n 1 17 PRO n 1 18 GLU n 1 19 LEU n 1 20 LEU n 1 21 LYS n 1 22 LEU n 1 23 LEU n 1 24 LYS n 1 25 SER n 1 26 VAL n 1 27 GLY n 1 28 ALA n 1 29 GLN n 1 30 LYS n 1 31 ASP n 1 32 THR n 1 33 TYR n 1 34 THR n 1 35 MET n 1 36 LYS n 1 37 GLU n 1 38 VAL n 1 39 LEU n 1 40 PHE n 1 41 TYR n 1 42 LEU n 1 43 GLY n 1 44 GLN n 1 45 TYR n 1 46 ILE n 1 47 MET n 1 48 THR n 1 49 LYS n 1 50 ARG n 1 51 LEU n 1 52 TYR n 1 53 ASP n 1 54 GLU n 1 55 LYS n 1 56 GLN n 1 57 GLN n 1 58 HIS n 1 59 ILE n 1 60 VAL n 1 61 TYR n 1 62 CYS n 1 63 SER n 1 64 ASN n 1 65 ASP n 1 66 LEU n 1 67 LEU n 1 68 GLY n 1 69 ASP n 1 70 LEU n 1 71 PHE n 1 72 GLY n 1 73 VAL n 1 74 PRO n 1 75 SER n 1 76 PHE n 1 77 SER n 1 78 VAL n 1 79 LYS n 1 80 GLU n 1 81 HIS n 1 82 ARG n 1 83 LYS n 1 84 ILE n 1 85 TYR n 1 86 THR n 1 87 MET n 1 88 ILE n 1 89 TYR n 1 90 ARG n 1 91 ASN n 1 92 LEU n 1 93 VAL n 1 94 VAL n 1 95 VAL n 1 96 ASN n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene MDM2 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 BLF non-polymer . '6-chloro-3-[1-(4-chlorobenzyl)-4-phenyl-1H-imidazol-5-yl]-N-[2-(morpholin-4-yl)ethyl]-1H-indole-2-carboxamide' ? 'C31 H29 Cl2 N5 O2' 574.500 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 16 ? ? ? A . n A 1 2 SER 2 17 ? ? ? A . n A 1 3 GLN 3 18 18 GLN GLN A . n A 1 4 ILE 4 19 19 ILE ILE A . n A 1 5 PRO 5 20 20 PRO PRO A . n A 1 6 ALA 6 21 21 ALA ALA A . n A 1 7 SER 7 22 22 SER SER A . n A 1 8 GLU 8 23 23 GLU GLU A . n A 1 9 GLN 9 24 24 GLN GLN A . n A 1 10 GLU 10 25 25 GLU GLU A . n A 1 11 THR 11 26 26 THR THR A . n A 1 12 LEU 12 27 27 LEU LEU A . n A 1 13 VAL 13 28 28 VAL VAL A . n A 1 14 ARG 14 29 29 ARG ARG A . n A 1 15 PRO 15 30 30 PRO PRO A . n A 1 16 LYS 16 31 31 LYS LYS A . n A 1 17 PRO 17 32 32 PRO PRO A . n A 1 18 GLU 18 33 33 GLU GLU A . n A 1 19 LEU 19 34 34 LEU LEU A . n A 1 20 LEU 20 35 35 LEU LEU A . n A 1 21 LYS 21 36 36 LYS LYS A . n A 1 22 LEU 22 37 37 LEU LEU A . n A 1 23 LEU 23 38 38 LEU LEU A . n A 1 24 LYS 24 39 39 LYS LYS A . n A 1 25 SER 25 40 40 SER SER A . n A 1 26 VAL 26 41 41 VAL VAL A . n A 1 27 GLY 27 42 42 GLY GLY A . n A 1 28 ALA 28 43 43 ALA ALA A . n A 1 29 GLN 29 44 44 GLN GLN A . n A 1 30 LYS 30 45 45 LYS LYS A . n A 1 31 ASP 31 46 46 ASP ASP A . n A 1 32 THR 32 47 47 THR THR A . n A 1 33 TYR 33 48 48 TYR TYR A . n A 1 34 THR 34 49 49 THR THR A . n A 1 35 MET 35 50 50 MET MET A . n A 1 36 LYS 36 51 51 LYS LYS A . n A 1 37 GLU 37 52 52 GLU GLU A . n A 1 38 VAL 38 53 53 VAL VAL A . n A 1 39 LEU 39 54 54 LEU LEU A . n A 1 40 PHE 40 55 55 PHE PHE A . n A 1 41 TYR 41 56 56 TYR TYR A . n A 1 42 LEU 42 57 57 LEU LEU A . n A 1 43 GLY 43 58 58 GLY GLY A . n A 1 44 GLN 44 59 59 GLN GLN A . n A 1 45 TYR 45 60 60 TYR TYR A . n A 1 46 ILE 46 61 61 ILE ILE A . n A 1 47 MET 47 62 62 MET MET A . n A 1 48 THR 48 63 63 THR THR A . n A 1 49 LYS 49 64 64 LYS LYS A . n A 1 50 ARG 50 65 65 ARG ARG A . n A 1 51 LEU 51 66 66 LEU LEU A . n A 1 52 TYR 52 67 67 TYR TYR A . n A 1 53 ASP 53 68 68 ASP ASP A . n A 1 54 GLU 54 69 69 GLU GLU A . n A 1 55 LYS 55 70 70 LYS LYS A . n A 1 56 GLN 56 71 71 GLN GLN A . n A 1 57 GLN 57 72 72 GLN GLN A . n A 1 58 HIS 58 73 73 HIS HIS A . n A 1 59 ILE 59 74 74 ILE ILE A . n A 1 60 VAL 60 75 75 VAL VAL A . n A 1 61 TYR 61 76 76 TYR TYR A . n A 1 62 CYS 62 77 77 CYS CYS A . n A 1 63 SER 63 78 78 SER SER A . n A 1 64 ASN 64 79 79 ASN ASN A . n A 1 65 ASP 65 80 80 ASP ASP A . n A 1 66 LEU 66 81 81 LEU LEU A . n A 1 67 LEU 67 82 82 LEU LEU A . n A 1 68 GLY 68 83 83 GLY GLY A . n A 1 69 ASP 69 84 84 ASP ASP A . n A 1 70 LEU 70 85 85 LEU LEU A . n A 1 71 PHE 71 86 86 PHE PHE A . n A 1 72 GLY 72 87 87 GLY GLY A . n A 1 73 VAL 73 88 88 VAL VAL A . n A 1 74 PRO 74 89 89 PRO PRO A . n A 1 75 SER 75 90 90 SER SER A . n A 1 76 PHE 76 91 91 PHE PHE A . n A 1 77 SER 77 92 92 SER SER A . n A 1 78 VAL 78 93 93 VAL VAL A . n A 1 79 LYS 79 94 94 LYS LYS A . n A 1 80 GLU 80 95 95 GLU GLU A . n A 1 81 HIS 81 96 96 HIS HIS A . n A 1 82 ARG 82 97 97 ARG ARG A . n A 1 83 LYS 83 98 98 LYS LYS A . n A 1 84 ILE 84 99 99 ILE ILE A . n A 1 85 TYR 85 100 100 TYR TYR A . n A 1 86 THR 86 101 101 THR THR A . n A 1 87 MET 87 102 102 MET MET A . n A 1 88 ILE 88 103 103 ILE ILE A . n A 1 89 TYR 89 104 104 TYR TYR A . n A 1 90 ARG 90 105 105 ARG ARG A . n A 1 91 ASN 91 106 106 ASN ASN A . n A 1 92 LEU 92 107 107 LEU LEU A . n A 1 93 VAL 93 108 108 VAL VAL A . n A 1 94 VAL 94 109 109 VAL VAL A . n A 1 95 VAL 95 110 110 VAL VAL A . n A 1 96 ASN 96 111 ? ? ? A . n B 1 1 GLY 1 16 ? ? ? B . n B 1 2 SER 2 17 ? ? ? B . n B 1 3 GLN 3 18 18 GLN GLN B . n B 1 4 ILE 4 19 19 ILE ILE B . n B 1 5 PRO 5 20 20 PRO PRO B . n B 1 6 ALA 6 21 21 ALA ALA B . n B 1 7 SER 7 22 22 SER SER B . n B 1 8 GLU 8 23 23 GLU GLU B . n B 1 9 GLN 9 24 24 GLN GLN B . n B 1 10 GLU 10 25 25 GLU GLU B . n B 1 11 THR 11 26 26 THR THR B . n B 1 12 LEU 12 27 27 LEU LEU B . n B 1 13 VAL 13 28 28 VAL VAL B . n B 1 14 ARG 14 29 29 ARG ARG B . n B 1 15 PRO 15 30 30 PRO PRO B . n B 1 16 LYS 16 31 31 LYS LYS B . n B 1 17 PRO 17 32 32 PRO PRO B . n B 1 18 GLU 18 33 33 GLU GLU B . n B 1 19 LEU 19 34 34 LEU LEU B . n B 1 20 LEU 20 35 35 LEU LEU B . n B 1 21 LYS 21 36 36 LYS LYS B . n B 1 22 LEU 22 37 37 LEU LEU B . n B 1 23 LEU 23 38 38 LEU LEU B . n B 1 24 LYS 24 39 39 LYS LYS B . n B 1 25 SER 25 40 40 SER SER B . n B 1 26 VAL 26 41 41 VAL VAL B . n B 1 27 GLY 27 42 42 GLY GLY B . n B 1 28 ALA 28 43 43 ALA ALA B . n B 1 29 GLN 29 44 44 GLN GLN B . n B 1 30 LYS 30 45 45 LYS LYS B . n B 1 31 ASP 31 46 46 ASP ASP B . n B 1 32 THR 32 47 47 THR THR B . n B 1 33 TYR 33 48 48 TYR TYR B . n B 1 34 THR 34 49 49 THR THR B . n B 1 35 MET 35 50 50 MET MET B . n B 1 36 LYS 36 51 51 LYS LYS B . n B 1 37 GLU 37 52 52 GLU GLU B . n B 1 38 VAL 38 53 53 VAL VAL B . n B 1 39 LEU 39 54 54 LEU LEU B . n B 1 40 PHE 40 55 55 PHE PHE B . n B 1 41 TYR 41 56 56 TYR TYR B . n B 1 42 LEU 42 57 57 LEU LEU B . n B 1 43 GLY 43 58 58 GLY GLY B . n B 1 44 GLN 44 59 59 GLN GLN B . n B 1 45 TYR 45 60 60 TYR TYR B . n B 1 46 ILE 46 61 61 ILE ILE B . n B 1 47 MET 47 62 62 MET MET B . n B 1 48 THR 48 63 63 THR THR B . n B 1 49 LYS 49 64 64 LYS LYS B . n B 1 50 ARG 50 65 65 ARG ARG B . n B 1 51 LEU 51 66 66 LEU LEU B . n B 1 52 TYR 52 67 67 TYR TYR B . n B 1 53 ASP 53 68 68 ASP ASP B . n B 1 54 GLU 54 69 69 GLU GLU B . n B 1 55 LYS 55 70 70 LYS LYS B . n B 1 56 GLN 56 71 71 GLN GLN B . n B 1 57 GLN 57 72 72 GLN GLN B . n B 1 58 HIS 58 73 73 HIS HIS B . n B 1 59 ILE 59 74 74 ILE ILE B . n B 1 60 VAL 60 75 75 VAL VAL B . n B 1 61 TYR 61 76 76 TYR TYR B . n B 1 62 CYS 62 77 77 CYS CYS B . n B 1 63 SER 63 78 78 SER SER B . n B 1 64 ASN 64 79 79 ASN ASN B . n B 1 65 ASP 65 80 80 ASP ASP B . n B 1 66 LEU 66 81 81 LEU LEU B . n B 1 67 LEU 67 82 82 LEU LEU B . n B 1 68 GLY 68 83 83 GLY GLY B . n B 1 69 ASP 69 84 84 ASP ASP B . n B 1 70 LEU 70 85 85 LEU LEU B . n B 1 71 PHE 71 86 86 PHE PHE B . n B 1 72 GLY 72 87 87 GLY GLY B . n B 1 73 VAL 73 88 88 VAL VAL B . n B 1 74 PRO 74 89 89 PRO PRO B . n B 1 75 SER 75 90 90 SER SER B . n B 1 76 PHE 76 91 91 PHE PHE B . n B 1 77 SER 77 92 92 SER SER B . n B 1 78 VAL 78 93 93 VAL VAL B . n B 1 79 LYS 79 94 94 LYS LYS B . n B 1 80 GLU 80 95 95 GLU GLU B . n B 1 81 HIS 81 96 96 HIS HIS B . n B 1 82 ARG 82 97 97 ARG ARG B . n B 1 83 LYS 83 98 98 LYS LYS B . n B 1 84 ILE 84 99 99 ILE ILE B . n B 1 85 TYR 85 100 100 TYR TYR B . n B 1 86 THR 86 101 101 THR THR B . n B 1 87 MET 87 102 102 MET MET B . n B 1 88 ILE 88 103 103 ILE ILE B . n B 1 89 TYR 89 104 104 TYR TYR B . n B 1 90 ARG 90 105 105 ARG ARG B . n B 1 91 ASN 91 106 106 ASN ASN B . n B 1 92 LEU 92 107 107 LEU LEU B . n B 1 93 VAL 93 108 108 VAL VAL B . n B 1 94 VAL 94 109 109 VAL VAL B . n B 1 95 VAL 95 110 110 VAL VAL B . n B 1 96 ASN 96 111 ? ? ? B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 BLF 1 201 1 BLF BLF A . D 2 BLF 1 201 1 BLF BLF B . E 3 HOH 1 301 4 HOH HOH A . E 3 HOH 2 302 5 HOH HOH A . E 3 HOH 3 303 6 HOH HOH A . E 3 HOH 4 304 7 HOH HOH A . E 3 HOH 5 305 8 HOH HOH A . E 3 HOH 6 306 10 HOH HOH A . E 3 HOH 7 307 15 HOH HOH A . E 3 HOH 8 308 18 HOH HOH A . E 3 HOH 9 309 20 HOH HOH A . E 3 HOH 10 310 22 HOH HOH A . E 3 HOH 11 311 23 HOH HOH A . E 3 HOH 12 312 25 HOH HOH A . E 3 HOH 13 313 30 HOH HOH A . E 3 HOH 14 314 31 HOH HOH A . E 3 HOH 15 315 33 HOH HOH A . E 3 HOH 16 316 34 HOH HOH A . E 3 HOH 17 317 36 HOH HOH A . E 3 HOH 18 318 43 HOH HOH A . E 3 HOH 19 319 45 HOH HOH A . E 3 HOH 20 320 47 HOH HOH A . E 3 HOH 21 321 48 HOH HOH A . E 3 HOH 22 322 49 HOH HOH A . E 3 HOH 23 323 50 HOH HOH A . E 3 HOH 24 324 51 HOH HOH A . E 3 HOH 25 325 53 HOH HOH A . E 3 HOH 26 326 54 HOH HOH A . E 3 HOH 27 327 55 HOH HOH A . E 3 HOH 28 328 56 HOH HOH A . E 3 HOH 29 329 60 HOH HOH A . E 3 HOH 30 330 64 HOH HOH A . E 3 HOH 31 331 65 HOH HOH A . E 3 HOH 32 332 66 HOH HOH A . E 3 HOH 33 333 69 HOH HOH A . E 3 HOH 34 334 70 HOH HOH A . E 3 HOH 35 335 73 HOH HOH A . E 3 HOH 36 336 74 HOH HOH A . E 3 HOH 37 337 75 HOH HOH A . E 3 HOH 38 338 76 HOH HOH A . E 3 HOH 39 339 79 HOH HOH A . E 3 HOH 40 340 81 HOH HOH A . E 3 HOH 41 341 87 HOH HOH A . E 3 HOH 42 342 88 HOH HOH A . E 3 HOH 43 343 89 HOH HOH A . E 3 HOH 44 344 90 HOH HOH A . E 3 HOH 45 345 91 HOH HOH A . E 3 HOH 46 346 95 HOH HOH A . E 3 HOH 47 347 96 HOH HOH A . E 3 HOH 48 348 97 HOH HOH A . E 3 HOH 49 349 98 HOH HOH A . E 3 HOH 50 350 99 HOH HOH A . E 3 HOH 51 351 101 HOH HOH A . E 3 HOH 52 352 105 HOH HOH A . E 3 HOH 53 353 106 HOH HOH A . E 3 HOH 54 354 107 HOH HOH A . E 3 HOH 55 355 109 HOH HOH A . E 3 HOH 56 356 110 HOH HOH A . E 3 HOH 57 357 111 HOH HOH A . E 3 HOH 58 358 113 HOH HOH A . E 3 HOH 59 359 114 HOH HOH A . E 3 HOH 60 360 116 HOH HOH A . E 3 HOH 61 361 117 HOH HOH A . E 3 HOH 62 362 120 HOH HOH A . E 3 HOH 63 363 122 HOH HOH A . E 3 HOH 64 364 123 HOH HOH A . E 3 HOH 65 365 124 HOH HOH A . E 3 HOH 66 366 125 HOH HOH A . E 3 HOH 67 367 127 HOH HOH A . E 3 HOH 68 368 129 HOH HOH A . E 3 HOH 69 369 132 HOH HOH A . E 3 HOH 70 370 133 HOH HOH A . E 3 HOH 71 371 134 HOH HOH A . E 3 HOH 72 372 137 HOH HOH A . E 3 HOH 73 373 139 HOH HOH A . E 3 HOH 74 374 147 HOH HOH A . E 3 HOH 75 375 148 HOH HOH A . E 3 HOH 76 376 151 HOH HOH A . E 3 HOH 77 377 152 HOH HOH A . E 3 HOH 78 378 158 HOH HOH A . E 3 HOH 79 379 167 HOH HOH A . E 3 HOH 80 380 168 HOH HOH A . E 3 HOH 81 381 171 HOH HOH A . E 3 HOH 82 382 172 HOH HOH A . E 3 HOH 83 383 174 HOH HOH A . E 3 HOH 84 384 175 HOH HOH A . E 3 HOH 85 385 177 HOH HOH A . E 3 HOH 86 386 178 HOH HOH A . E 3 HOH 87 387 179 HOH HOH A . E 3 HOH 88 388 180 HOH HOH A . E 3 HOH 89 389 181 HOH HOH A . E 3 HOH 90 390 182 HOH HOH A . E 3 HOH 91 391 185 HOH HOH A . E 3 HOH 92 392 186 HOH HOH A . E 3 HOH 93 393 188 HOH HOH A . E 3 HOH 94 394 189 HOH HOH A . E 3 HOH 95 395 190 HOH HOH A . E 3 HOH 96 396 191 HOH HOH A . E 3 HOH 97 397 192 HOH HOH A . E 3 HOH 98 398 193 HOH HOH A . E 3 HOH 99 399 195 HOH HOH A . E 3 HOH 100 400 196 HOH HOH A . E 3 HOH 101 401 197 HOH HOH A . E 3 HOH 102 402 200 HOH HOH A . F 3 HOH 1 301 1 HOH HOH B . F 3 HOH 2 302 2 HOH HOH B . F 3 HOH 3 303 3 HOH HOH B . F 3 HOH 4 304 9 HOH HOH B . F 3 HOH 5 305 11 HOH HOH B . F 3 HOH 6 306 12 HOH HOH B . F 3 HOH 7 307 13 HOH HOH B . F 3 HOH 8 308 14 HOH HOH B . F 3 HOH 9 309 16 HOH HOH B . F 3 HOH 10 310 17 HOH HOH B . F 3 HOH 11 311 19 HOH HOH B . F 3 HOH 12 312 21 HOH HOH B . F 3 HOH 13 313 24 HOH HOH B . F 3 HOH 14 314 26 HOH HOH B . F 3 HOH 15 315 27 HOH HOH B . F 3 HOH 16 316 28 HOH HOH B . F 3 HOH 17 317 29 HOH HOH B . F 3 HOH 18 318 32 HOH HOH B . F 3 HOH 19 319 35 HOH HOH B . F 3 HOH 20 320 37 HOH HOH B . F 3 HOH 21 321 38 HOH HOH B . F 3 HOH 22 322 39 HOH HOH B . F 3 HOH 23 323 40 HOH HOH B . F 3 HOH 24 324 41 HOH HOH B . F 3 HOH 25 325 42 HOH HOH B . F 3 HOH 26 326 44 HOH HOH B . F 3 HOH 27 327 46 HOH HOH B . F 3 HOH 28 328 52 HOH HOH B . F 3 HOH 29 329 57 HOH HOH B . F 3 HOH 30 330 58 HOH HOH B . F 3 HOH 31 331 59 HOH HOH B . F 3 HOH 32 332 61 HOH HOH B . F 3 HOH 33 333 62 HOH HOH B . F 3 HOH 34 334 63 HOH HOH B . F 3 HOH 35 335 67 HOH HOH B . F 3 HOH 36 336 68 HOH HOH B . F 3 HOH 37 337 71 HOH HOH B . F 3 HOH 38 338 72 HOH HOH B . F 3 HOH 39 339 77 HOH HOH B . F 3 HOH 40 340 78 HOH HOH B . F 3 HOH 41 341 80 HOH HOH B . F 3 HOH 42 342 82 HOH HOH B . F 3 HOH 43 343 83 HOH HOH B . F 3 HOH 44 344 84 HOH HOH B . F 3 HOH 45 345 85 HOH HOH B . F 3 HOH 46 346 86 HOH HOH B . F 3 HOH 47 347 92 HOH HOH B . F 3 HOH 48 348 93 HOH HOH B . F 3 HOH 49 349 94 HOH HOH B . F 3 HOH 50 350 100 HOH HOH B . F 3 HOH 51 351 102 HOH HOH B . F 3 HOH 52 352 103 HOH HOH B . F 3 HOH 53 353 104 HOH HOH B . F 3 HOH 54 354 108 HOH HOH B . F 3 HOH 55 355 112 HOH HOH B . F 3 HOH 56 356 115 HOH HOH B . F 3 HOH 57 357 118 HOH HOH B . F 3 HOH 58 358 119 HOH HOH B . F 3 HOH 59 359 121 HOH HOH B . F 3 HOH 60 360 126 HOH HOH B . F 3 HOH 61 361 128 HOH HOH B . F 3 HOH 62 362 130 HOH HOH B . F 3 HOH 63 363 131 HOH HOH B . F 3 HOH 64 364 135 HOH HOH B . F 3 HOH 65 365 136 HOH HOH B . F 3 HOH 66 366 138 HOH HOH B . F 3 HOH 67 367 140 HOH HOH B . F 3 HOH 68 368 141 HOH HOH B . F 3 HOH 69 369 142 HOH HOH B . F 3 HOH 70 370 143 HOH HOH B . F 3 HOH 71 371 144 HOH HOH B . F 3 HOH 72 372 145 HOH HOH B . F 3 HOH 73 373 146 HOH HOH B . F 3 HOH 74 374 149 HOH HOH B . F 3 HOH 75 375 150 HOH HOH B . F 3 HOH 76 376 153 HOH HOH B . F 3 HOH 77 377 154 HOH HOH B . F 3 HOH 78 378 155 HOH HOH B . F 3 HOH 79 379 156 HOH HOH B . F 3 HOH 80 380 157 HOH HOH B . F 3 HOH 81 381 159 HOH HOH B . F 3 HOH 82 382 160 HOH HOH B . F 3 HOH 83 383 161 HOH HOH B . F 3 HOH 84 384 162 HOH HOH B . F 3 HOH 85 385 163 HOH HOH B . F 3 HOH 86 386 164 HOH HOH B . F 3 HOH 87 387 165 HOH HOH B . F 3 HOH 88 388 166 HOH HOH B . F 3 HOH 89 389 169 HOH HOH B . F 3 HOH 90 390 170 HOH HOH B . F 3 HOH 91 391 173 HOH HOH B . F 3 HOH 92 392 176 HOH HOH B . F 3 HOH 93 393 183 HOH HOH B . F 3 HOH 94 394 184 HOH HOH B . F 3 HOH 95 395 187 HOH HOH B . F 3 HOH 96 396 194 HOH HOH B . F 3 HOH 97 397 198 HOH HOH B . F 3 HOH 98 398 199 HOH HOH B . F 3 HOH 99 399 201 HOH HOH B . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal RemDAq 'data collection' . ? 1 MOLREP phasing . ? 2 REFMAC refinement 5.5.0063 ? 3 HKL-2000 'data reduction' . ? 4 SCALEPACK 'data scaling' . ? 5 # _cell.entry_id 4DIJ _cell.length_a 38.234 _cell.length_b 38.234 _cell.length_c 175.151 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4DIJ _symmetry.space_group_name_H-M 'P 43' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 78 _symmetry.space_group_name_Hall ? # _exptl.entry_id 4DIJ _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.86 _exptl_crystal.density_percent_sol 57.06 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 8.5 _exptl_crystal_grow.pdbx_details '0.1M Tris, 0.2M LiSO4, 22% PEG3350, pH 8.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 225 mm CCD' _diffrn_detector.pdbx_collection_date 2006-11-27 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Si 111 CHANNEL' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.8000 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SLS BEAMLINE X10SA' _diffrn_source.pdbx_synchrotron_site SLS _diffrn_source.pdbx_synchrotron_beamline X10SA _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.8000 # _reflns.entry_id 4DIJ _reflns.observed_criterion_sigma_I 0.0 _reflns.observed_criterion_sigma_F 0.0 _reflns.d_resolution_low 20.0 _reflns.d_resolution_high 1.90 _reflns.number_obs 18006 _reflns.number_all 18006 _reflns.percent_possible_obs 91.3 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.053 _reflns.pdbx_netI_over_sigmaI 27.5 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 5.5 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.90 _reflns_shell.d_res_low 1.97 _reflns_shell.percent_possible_all 53.1 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value 0.157 _reflns_shell.meanI_over_sigI_obs 4.8 _reflns_shell.pdbx_redundancy 3.0 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 1032 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 4DIJ _refine.ls_number_reflns_obs 17072 _refine.ls_number_reflns_all 17072 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 20.00 _refine.ls_d_res_high 1.90 _refine.ls_percent_reflns_obs 91.57 _refine.ls_R_factor_obs 0.19536 _refine.ls_R_factor_all 0.19536 _refine.ls_R_factor_R_work 0.19391 _refine.ls_R_factor_R_free 0.22365 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.1 _refine.ls_number_reflns_R_free 918 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.939 _refine.correlation_coeff_Fo_to_Fc_free 0.928 _refine.B_iso_mean 20.438 _refine.aniso_B[1][1] 0.63 _refine.aniso_B[2][2] 0.63 _refine.aniso_B[3][3] -1.27 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model 'IN HOUSE DETERMINED X-RAY STRUCTURE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.166 _refine.pdbx_overall_ESU_R_Free 0.145 _refine.overall_SU_ML 0.079 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 2.594 _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1532 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 80 _refine_hist.number_atoms_solvent 201 _refine_hist.number_atoms_total 1813 _refine_hist.d_res_high 1.90 _refine_hist.d_res_low 20.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id r_bond_refined_d 0.008 0.022 ? 1652 ? 'X-RAY DIFFRACTION' r_angle_refined_deg 1.058 2.049 ? 2232 ? 'X-RAY DIFFRACTION' r_dihedral_angle_1_deg 5.356 5.000 ? 184 ? 'X-RAY DIFFRACTION' r_dihedral_angle_2_deg 43.344 24.118 ? 68 ? 'X-RAY DIFFRACTION' r_dihedral_angle_3_deg 12.628 15.000 ? 306 ? 'X-RAY DIFFRACTION' r_dihedral_angle_4_deg 18.304 15.000 ? 8 ? 'X-RAY DIFFRACTION' r_chiral_restr 0.067 0.200 ? 240 ? 'X-RAY DIFFRACTION' r_gen_planes_refined 0.005 0.021 ? 1210 ? 'X-RAY DIFFRACTION' r_mcbond_it 0.510 1.500 ? 928 ? 'X-RAY DIFFRACTION' r_mcangle_it 1.035 2.000 ? 1516 ? 'X-RAY DIFFRACTION' r_scbond_it 1.648 3.000 ? 724 ? 'X-RAY DIFFRACTION' r_scangle_it 2.871 4.500 ? 716 ? 'X-RAY DIFFRACTION' # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.90 _refine_ls_shell.d_res_low 1.950 _refine_ls_shell.number_reflns_R_work 679 _refine_ls_shell.R_factor_R_work 0.193 _refine_ls_shell.percent_reflns_obs 50.49 _refine_ls_shell.R_factor_R_free 0.250 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 38 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _database_PDB_matrix.entry_id 4DIJ _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 4DIJ _struct.title 'The Central Valine Concept Provides an Entry in a New Class of Non Peptide Inhibitors of the P53-MDM2 Interaction' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4DIJ _struct_keywords.pdbx_keywords 'LIGASE/LIGASE INHIBITOR' _struct_keywords.text 'PPI with p53, PPI inhibitor, LIGASE-LIGASE INHIBITOR complex' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? E N N 3 ? F N N 3 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code MDM2_HUMAN _struct_ref.pdbx_db_accession Q00987 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;SQIPASEQETLVRPKPLLLKLLKSVGAQKDTYTMKEVLFYLGQYIMTKRLYDEKQQHIVYCSNDLLGDLFGVPSFSVKEH RKIYTMIYRNLVVVN ; _struct_ref.pdbx_align_begin 17 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4DIJ A 2 ? 96 ? Q00987 17 ? 111 ? 17 111 2 1 4DIJ B 2 ? 96 ? Q00987 17 ? 111 ? 17 111 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4DIJ GLY A 1 ? UNP Q00987 ? ? 'expression tag' 16 1 1 4DIJ GLU A 18 ? UNP Q00987 LEU 33 'engineered mutation' 33 2 2 4DIJ GLY B 1 ? UNP Q00987 ? ? 'expression tag' 16 3 2 4DIJ GLU B 18 ? UNP Q00987 LEU 33 'engineered mutation' 33 4 # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_defined_assembly ? monomeric 1 2 author_defined_assembly ? monomeric 1 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,C,E 2 1 B,D,F # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 PRO A 5 ? GLU A 10 ? PRO A 20 GLU A 25 1 ? 6 HELX_P HELX_P2 2 LYS A 16 ? VAL A 26 ? LYS A 31 VAL A 41 1 ? 11 HELX_P HELX_P3 3 MET A 35 ? LYS A 49 ? MET A 50 LYS A 64 1 ? 15 HELX_P HELX_P4 4 ASP A 65 ? GLY A 72 ? ASP A 80 GLY A 87 1 ? 8 HELX_P HELX_P5 5 GLU A 80 ? ARG A 90 ? GLU A 95 ARG A 105 1 ? 11 HELX_P HELX_P6 6 SER B 7 ? GLU B 10 ? SER B 22 GLU B 25 5 ? 4 HELX_P HELX_P7 7 LYS B 16 ? VAL B 26 ? LYS B 31 VAL B 41 1 ? 11 HELX_P HELX_P8 8 MET B 35 ? LYS B 49 ? MET B 50 LYS B 64 1 ? 15 HELX_P HELX_P9 9 ASP B 65 ? GLY B 72 ? ASP B 80 GLY B 87 1 ? 8 HELX_P HELX_P10 10 GLU B 80 ? ARG B 90 ? GLU B 95 ARG B 105 1 ? 11 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 3 ? B ? 2 ? C ? 3 ? D ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel B 1 2 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel D 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 TYR A 33 ? THR A 34 ? TYR A 48 THR A 49 A 2 LEU A 12 ? PRO A 15 ? LEU A 27 PRO A 30 A 3 LEU A 92 ? VAL A 94 ? LEU A 107 VAL A 109 B 1 ILE A 59 ? TYR A 61 ? ILE A 74 TYR A 76 B 2 SER A 75 ? SER A 77 ? SER A 90 SER A 92 C 1 TYR B 33 ? THR B 34 ? TYR B 48 THR B 49 C 2 LEU B 12 ? PRO B 15 ? LEU B 27 PRO B 30 C 3 LEU B 92 ? VAL B 93 ? LEU B 107 VAL B 108 D 1 ILE B 59 ? TYR B 61 ? ILE B 74 TYR B 76 D 2 SER B 75 ? SER B 77 ? SER B 90 SER B 92 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O TYR A 33 ? O TYR A 48 N VAL A 13 ? N VAL A 28 A 2 3 N ARG A 14 ? N ARG A 29 O VAL A 93 ? O VAL A 108 B 1 2 N VAL A 60 ? N VAL A 75 O PHE A 76 ? O PHE A 91 C 1 2 O TYR B 33 ? O TYR B 48 N VAL B 13 ? N VAL B 28 C 2 3 N ARG B 14 ? N ARG B 29 O VAL B 93 ? O VAL B 108 D 1 2 N VAL B 60 ? N VAL B 75 O PHE B 76 ? O PHE B 91 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A BLF 201 ? 14 'BINDING SITE FOR RESIDUE BLF A 201' AC2 Software B BLF 201 ? 11 'BINDING SITE FOR RESIDUE BLF B 201' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 14 LEU A 39 ? LEU A 54 . ? 1_555 ? 2 AC1 14 PHE A 40 ? PHE A 55 . ? 1_555 ? 3 AC1 14 GLY A 43 ? GLY A 58 . ? 1_555 ? 4 AC1 14 ILE A 46 ? ILE A 61 . ? 1_555 ? 5 AC1 14 VAL A 78 ? VAL A 93 . ? 1_555 ? 6 AC1 14 HIS A 81 ? HIS A 96 . ? 1_555 ? 7 AC1 14 ILE A 84 ? ILE A 99 . ? 1_555 ? 8 AC1 14 HOH E . ? HOH A 304 . ? 1_555 ? 9 AC1 14 HOH E . ? HOH A 326 . ? 1_555 ? 10 AC1 14 MET B 47 ? MET B 62 . ? 1_555 ? 11 AC1 14 TYR B 52 ? TYR B 67 . ? 1_555 ? 12 AC1 14 GLN B 57 ? GLN B 72 . ? 1_555 ? 13 AC1 14 BLF D . ? BLF B 201 . ? 1_555 ? 14 AC1 14 HOH F . ? HOH B 319 . ? 1_555 ? 15 AC2 11 MET A 47 ? MET A 62 . ? 1_555 ? 16 AC2 11 TYR A 52 ? TYR A 67 . ? 1_555 ? 17 AC2 11 GLN A 57 ? GLN A 72 . ? 1_555 ? 18 AC2 11 BLF C . ? BLF A 201 . ? 1_555 ? 19 AC2 11 HOH E . ? HOH A 314 . ? 1_555 ? 20 AC2 11 LEU B 39 ? LEU B 54 . ? 1_555 ? 21 AC2 11 GLY B 43 ? GLY B 58 . ? 1_555 ? 22 AC2 11 ILE B 46 ? ILE B 61 . ? 1_555 ? 23 AC2 11 VAL B 78 ? VAL B 93 . ? 1_555 ? 24 AC2 11 HIS B 81 ? HIS B 96 . ? 1_555 ? 25 AC2 11 HOH F . ? HOH B 310 . ? 1_555 ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLU A 95 ? ? -103.32 78.27 2 1 GLU B 95 ? ? -100.91 77.49 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 16 ? A GLY 1 2 1 Y 1 A SER 17 ? A SER 2 3 1 Y 1 A ASN 111 ? A ASN 96 4 1 Y 1 B GLY 16 ? B GLY 1 5 1 Y 1 B SER 17 ? B SER 2 6 1 Y 1 B ASN 111 ? B ASN 96 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 BLF CL1 CL N N 74 BLF C2 C Y N 75 BLF CL2 CL N N 76 BLF C3 C Y N 77 BLF C5 C Y N 78 BLF N6 N Y N 79 BLF C8 C Y N 80 BLF C9 C Y N 81 BLF C10 C Y N 82 BLF C11 C Y N 83 BLF C13 C Y N 84 BLF C15 C Y N 85 BLF N16 N Y N 86 BLF C17 C Y N 87 BLF N19 N Y N 88 BLF C20 C Y N 89 BLF C21 C Y N 90 BLF C22 C Y N 91 BLF C24 C Y N 92 BLF C26 C Y N 93 BLF C28 C Y N 94 BLF C30 C Y N 95 BLF C32 C N N 96 BLF C35 C Y N 97 BLF C36 C Y N 98 BLF C38 C Y N 99 BLF C40 C Y N 100 BLF C41 C Y N 101 BLF C43 C Y N 102 BLF C46 C N N 103 BLF O47 O N N 104 BLF N48 N N N 105 BLF C50 C N N 106 BLF C53 C N N 107 BLF N56 N N N 108 BLF C57 C N N 109 BLF C60 C N N 110 BLF O63 O N N 111 BLF C64 C N N 112 BLF C67 C N N 113 BLF H3 H N N 114 BLF H11 H N N 115 BLF H13 H N N 116 BLF H17 H N N 117 BLF H22 H N N 118 BLF H24 H N N 119 BLF H26 H N N 120 BLF H28 H N N 121 BLF H30 H N N 122 BLF H32 H N N 123 BLF H32A H N N 124 BLF H36 H N N 125 BLF H38 H N N 126 BLF H41 H N N 127 BLF H43 H N N 128 BLF HN48 H N N 129 BLF H50 H N N 130 BLF H50A H N N 131 BLF H53 H N N 132 BLF H53A H N N 133 BLF H57 H N N 134 BLF H57A H N N 135 BLF H60 H N N 136 BLF H60A H N N 137 BLF H64 H N N 138 BLF H64A H N N 139 BLF H67 H N N 140 BLF H67A H N N 141 BLF HN6 H N N 142 CYS N N N N 143 CYS CA C N R 144 CYS C C N N 145 CYS O O N N 146 CYS CB C N N 147 CYS SG S N N 148 CYS OXT O N N 149 CYS H H N N 150 CYS H2 H N N 151 CYS HA H N N 152 CYS HB2 H N N 153 CYS HB3 H N N 154 CYS HG H N N 155 CYS HXT H N N 156 GLN N N N N 157 GLN CA C N S 158 GLN C C N N 159 GLN O O N N 160 GLN CB C N N 161 GLN CG C N N 162 GLN CD C N N 163 GLN OE1 O N N 164 GLN NE2 N N N 165 GLN OXT O N N 166 GLN H H N N 167 GLN H2 H N N 168 GLN HA H N N 169 GLN HB2 H N N 170 GLN HB3 H N N 171 GLN HG2 H N N 172 GLN HG3 H N N 173 GLN HE21 H N N 174 GLN HE22 H N N 175 GLN HXT H N N 176 GLU N N N N 177 GLU CA C N S 178 GLU C C N N 179 GLU O O N N 180 GLU CB C N N 181 GLU CG C N N 182 GLU CD C N N 183 GLU OE1 O N N 184 GLU OE2 O N N 185 GLU OXT O N N 186 GLU H H N N 187 GLU H2 H N N 188 GLU HA H N N 189 GLU HB2 H N N 190 GLU HB3 H N N 191 GLU HG2 H N N 192 GLU HG3 H N N 193 GLU HE2 H N N 194 GLU HXT H N N 195 GLY N N N N 196 GLY CA C N N 197 GLY C C N N 198 GLY O O N N 199 GLY OXT O N N 200 GLY H H N N 201 GLY H2 H N N 202 GLY HA2 H N N 203 GLY HA3 H N N 204 GLY HXT H N N 205 HIS N N N N 206 HIS CA C N S 207 HIS C C N N 208 HIS O O N N 209 HIS CB C N N 210 HIS CG C Y N 211 HIS ND1 N Y N 212 HIS CD2 C Y N 213 HIS CE1 C Y N 214 HIS NE2 N Y N 215 HIS OXT O N N 216 HIS H H N N 217 HIS H2 H N N 218 HIS HA H N N 219 HIS HB2 H N N 220 HIS HB3 H N N 221 HIS HD1 H N N 222 HIS HD2 H N N 223 HIS HE1 H N N 224 HIS HE2 H N N 225 HIS HXT H N N 226 HOH O O N N 227 HOH H1 H N N 228 HOH H2 H N N 229 ILE N N N N 230 ILE CA C N S 231 ILE C C N N 232 ILE O O N N 233 ILE CB C N S 234 ILE CG1 C N N 235 ILE CG2 C N N 236 ILE CD1 C N N 237 ILE OXT O N N 238 ILE H H N N 239 ILE H2 H N N 240 ILE HA H N N 241 ILE HB H N N 242 ILE HG12 H N N 243 ILE HG13 H N N 244 ILE HG21 H N N 245 ILE HG22 H N N 246 ILE HG23 H N N 247 ILE HD11 H N N 248 ILE HD12 H N N 249 ILE HD13 H N N 250 ILE HXT H N N 251 LEU N N N N 252 LEU CA C N S 253 LEU C C N N 254 LEU O O N N 255 LEU CB C N N 256 LEU CG C N N 257 LEU CD1 C N N 258 LEU CD2 C N N 259 LEU OXT O N N 260 LEU H H N N 261 LEU H2 H N N 262 LEU HA H N N 263 LEU HB2 H N N 264 LEU HB3 H N N 265 LEU HG H N N 266 LEU HD11 H N N 267 LEU HD12 H N N 268 LEU HD13 H N N 269 LEU HD21 H N N 270 LEU HD22 H N N 271 LEU HD23 H N N 272 LEU HXT H N N 273 LYS N N N N 274 LYS CA C N S 275 LYS C C N N 276 LYS O O N N 277 LYS CB C N N 278 LYS CG C N N 279 LYS CD C N N 280 LYS CE C N N 281 LYS NZ N N N 282 LYS OXT O N N 283 LYS H H N N 284 LYS H2 H N N 285 LYS HA H N N 286 LYS HB2 H N N 287 LYS HB3 H N N 288 LYS HG2 H N N 289 LYS HG3 H N N 290 LYS HD2 H N N 291 LYS HD3 H N N 292 LYS HE2 H N N 293 LYS HE3 H N N 294 LYS HZ1 H N N 295 LYS HZ2 H N N 296 LYS HZ3 H N N 297 LYS HXT H N N 298 MET N N N N 299 MET CA C N S 300 MET C C N N 301 MET O O N N 302 MET CB C N N 303 MET CG C N N 304 MET SD S N N 305 MET CE C N N 306 MET OXT O N N 307 MET H H N N 308 MET H2 H N N 309 MET HA H N N 310 MET HB2 H N N 311 MET HB3 H N N 312 MET HG2 H N N 313 MET HG3 H N N 314 MET HE1 H N N 315 MET HE2 H N N 316 MET HE3 H N N 317 MET HXT H N N 318 PHE N N N N 319 PHE CA C N S 320 PHE C C N N 321 PHE O O N N 322 PHE CB C N N 323 PHE CG C Y N 324 PHE CD1 C Y N 325 PHE CD2 C Y N 326 PHE CE1 C Y N 327 PHE CE2 C Y N 328 PHE CZ C Y N 329 PHE OXT O N N 330 PHE H H N N 331 PHE H2 H N N 332 PHE HA H N N 333 PHE HB2 H N N 334 PHE HB3 H N N 335 PHE HD1 H N N 336 PHE HD2 H N N 337 PHE HE1 H N N 338 PHE HE2 H N N 339 PHE HZ H N N 340 PHE HXT H N N 341 PRO N N N N 342 PRO CA C N S 343 PRO C C N N 344 PRO O O N N 345 PRO CB C N N 346 PRO CG C N N 347 PRO CD C N N 348 PRO OXT O N N 349 PRO H H N N 350 PRO HA H N N 351 PRO HB2 H N N 352 PRO HB3 H N N 353 PRO HG2 H N N 354 PRO HG3 H N N 355 PRO HD2 H N N 356 PRO HD3 H N N 357 PRO HXT H N N 358 SER N N N N 359 SER CA C N S 360 SER C C N N 361 SER O O N N 362 SER CB C N N 363 SER OG O N N 364 SER OXT O N N 365 SER H H N N 366 SER H2 H N N 367 SER HA H N N 368 SER HB2 H N N 369 SER HB3 H N N 370 SER HG H N N 371 SER HXT H N N 372 THR N N N N 373 THR CA C N S 374 THR C C N N 375 THR O O N N 376 THR CB C N R 377 THR OG1 O N N 378 THR CG2 C N N 379 THR OXT O N N 380 THR H H N N 381 THR H2 H N N 382 THR HA H N N 383 THR HB H N N 384 THR HG1 H N N 385 THR HG21 H N N 386 THR HG22 H N N 387 THR HG23 H N N 388 THR HXT H N N 389 TYR N N N N 390 TYR CA C N S 391 TYR C C N N 392 TYR O O N N 393 TYR CB C N N 394 TYR CG C Y N 395 TYR CD1 C Y N 396 TYR CD2 C Y N 397 TYR CE1 C Y N 398 TYR CE2 C Y N 399 TYR CZ C Y N 400 TYR OH O N N 401 TYR OXT O N N 402 TYR H H N N 403 TYR H2 H N N 404 TYR HA H N N 405 TYR HB2 H N N 406 TYR HB3 H N N 407 TYR HD1 H N N 408 TYR HD2 H N N 409 TYR HE1 H N N 410 TYR HE2 H N N 411 TYR HH H N N 412 TYR HXT H N N 413 VAL N N N N 414 VAL CA C N S 415 VAL C C N N 416 VAL O O N N 417 VAL CB C N N 418 VAL CG1 C N N 419 VAL CG2 C N N 420 VAL OXT O N N 421 VAL H H N N 422 VAL H2 H N N 423 VAL HA H N N 424 VAL HB H N N 425 VAL HG11 H N N 426 VAL HG12 H N N 427 VAL HG13 H N N 428 VAL HG21 H N N 429 VAL HG22 H N N 430 VAL HG23 H N N 431 VAL HXT H N N 432 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 BLF C2 CL1 sing N N 70 BLF C13 C2 doub Y N 71 BLF C2 C3 sing Y N 72 BLF C40 CL2 sing N N 73 BLF C5 C3 doub Y N 74 BLF C3 H3 sing N N 75 BLF C10 C5 sing Y N 76 BLF C5 N6 sing Y N 77 BLF C8 N6 sing Y N 78 BLF C9 C8 doub Y N 79 BLF C46 C8 sing N N 80 BLF C15 C9 sing N N 81 BLF C9 C10 sing Y N 82 BLF C11 C10 doub Y N 83 BLF C11 C13 sing Y N 84 BLF C11 H11 sing N N 85 BLF C13 H13 sing N N 86 BLF C20 C15 doub Y N 87 BLF C15 N16 sing Y N 88 BLF C17 N16 sing Y N 89 BLF N16 C32 sing N N 90 BLF N19 C17 doub Y N 91 BLF C17 H17 sing N N 92 BLF N19 C20 sing Y N 93 BLF C21 C20 sing N N 94 BLF C30 C21 doub Y N 95 BLF C22 C21 sing Y N 96 BLF C24 C22 doub Y N 97 BLF C22 H22 sing N N 98 BLF C26 C24 sing Y N 99 BLF C24 H24 sing N N 100 BLF C26 C28 doub Y N 101 BLF C26 H26 sing N N 102 BLF C28 C30 sing Y N 103 BLF C28 H28 sing N N 104 BLF C30 H30 sing N N 105 BLF C32 C35 sing N N 106 BLF C32 H32 sing N N 107 BLF C32 H32A sing N N 108 BLF C36 C35 doub Y N 109 BLF C35 C43 sing Y N 110 BLF C36 C38 sing Y N 111 BLF C36 H36 sing N N 112 BLF C38 C40 doub Y N 113 BLF C38 H38 sing N N 114 BLF C40 C41 sing Y N 115 BLF C43 C41 doub Y N 116 BLF C41 H41 sing N N 117 BLF C43 H43 sing N N 118 BLF N48 C46 sing N N 119 BLF C46 O47 doub N N 120 BLF C50 N48 sing N N 121 BLF N48 HN48 sing N N 122 BLF C53 C50 sing N N 123 BLF C50 H50 sing N N 124 BLF C50 H50A sing N N 125 BLF N56 C53 sing N N 126 BLF C53 H53 sing N N 127 BLF C53 H53A sing N N 128 BLF C57 N56 sing N N 129 BLF N56 C67 sing N N 130 BLF C60 C57 sing N N 131 BLF C57 H57 sing N N 132 BLF C57 H57A sing N N 133 BLF C60 O63 sing N N 134 BLF C60 H60 sing N N 135 BLF C60 H60A sing N N 136 BLF O63 C64 sing N N 137 BLF C64 C67 sing N N 138 BLF C64 H64 sing N N 139 BLF C64 H64A sing N N 140 BLF C67 H67 sing N N 141 BLF C67 H67A sing N N 142 BLF N6 HN6 sing N N 143 CYS N CA sing N N 144 CYS N H sing N N 145 CYS N H2 sing N N 146 CYS CA C sing N N 147 CYS CA CB sing N N 148 CYS CA HA sing N N 149 CYS C O doub N N 150 CYS C OXT sing N N 151 CYS CB SG sing N N 152 CYS CB HB2 sing N N 153 CYS CB HB3 sing N N 154 CYS SG HG sing N N 155 CYS OXT HXT sing N N 156 GLN N CA sing N N 157 GLN N H sing N N 158 GLN N H2 sing N N 159 GLN CA C sing N N 160 GLN CA CB sing N N 161 GLN CA HA sing N N 162 GLN C O doub N N 163 GLN C OXT sing N N 164 GLN CB CG sing N N 165 GLN CB HB2 sing N N 166 GLN CB HB3 sing N N 167 GLN CG CD sing N N 168 GLN CG HG2 sing N N 169 GLN CG HG3 sing N N 170 GLN CD OE1 doub N N 171 GLN CD NE2 sing N N 172 GLN NE2 HE21 sing N N 173 GLN NE2 HE22 sing N N 174 GLN OXT HXT sing N N 175 GLU N CA sing N N 176 GLU N H sing N N 177 GLU N H2 sing N N 178 GLU CA C sing N N 179 GLU CA CB sing N N 180 GLU CA HA sing N N 181 GLU C O doub N N 182 GLU C OXT sing N N 183 GLU CB CG sing N N 184 GLU CB HB2 sing N N 185 GLU CB HB3 sing N N 186 GLU CG CD sing N N 187 GLU CG HG2 sing N N 188 GLU CG HG3 sing N N 189 GLU CD OE1 doub N N 190 GLU CD OE2 sing N N 191 GLU OE2 HE2 sing N N 192 GLU OXT HXT sing N N 193 GLY N CA sing N N 194 GLY N H sing N N 195 GLY N H2 sing N N 196 GLY CA C sing N N 197 GLY CA HA2 sing N N 198 GLY CA HA3 sing N N 199 GLY C O doub N N 200 GLY C OXT sing N N 201 GLY OXT HXT sing N N 202 HIS N CA sing N N 203 HIS N H sing N N 204 HIS N H2 sing N N 205 HIS CA C sing N N 206 HIS CA CB sing N N 207 HIS CA HA sing N N 208 HIS C O doub N N 209 HIS C OXT sing N N 210 HIS CB CG sing N N 211 HIS CB HB2 sing N N 212 HIS CB HB3 sing N N 213 HIS CG ND1 sing Y N 214 HIS CG CD2 doub Y N 215 HIS ND1 CE1 doub Y N 216 HIS ND1 HD1 sing N N 217 HIS CD2 NE2 sing Y N 218 HIS CD2 HD2 sing N N 219 HIS CE1 NE2 sing Y N 220 HIS CE1 HE1 sing N N 221 HIS NE2 HE2 sing N N 222 HIS OXT HXT sing N N 223 HOH O H1 sing N N 224 HOH O H2 sing N N 225 ILE N CA sing N N 226 ILE N H sing N N 227 ILE N H2 sing N N 228 ILE CA C sing N N 229 ILE CA CB sing N N 230 ILE CA HA sing N N 231 ILE C O doub N N 232 ILE C OXT sing N N 233 ILE CB CG1 sing N N 234 ILE CB CG2 sing N N 235 ILE CB HB sing N N 236 ILE CG1 CD1 sing N N 237 ILE CG1 HG12 sing N N 238 ILE CG1 HG13 sing N N 239 ILE CG2 HG21 sing N N 240 ILE CG2 HG22 sing N N 241 ILE CG2 HG23 sing N N 242 ILE CD1 HD11 sing N N 243 ILE CD1 HD12 sing N N 244 ILE CD1 HD13 sing N N 245 ILE OXT HXT sing N N 246 LEU N CA sing N N 247 LEU N H sing N N 248 LEU N H2 sing N N 249 LEU CA C sing N N 250 LEU CA CB sing N N 251 LEU CA HA sing N N 252 LEU C O doub N N 253 LEU C OXT sing N N 254 LEU CB CG sing N N 255 LEU CB HB2 sing N N 256 LEU CB HB3 sing N N 257 LEU CG CD1 sing N N 258 LEU CG CD2 sing N N 259 LEU CG HG sing N N 260 LEU CD1 HD11 sing N N 261 LEU CD1 HD12 sing N N 262 LEU CD1 HD13 sing N N 263 LEU CD2 HD21 sing N N 264 LEU CD2 HD22 sing N N 265 LEU CD2 HD23 sing N N 266 LEU OXT HXT sing N N 267 LYS N CA sing N N 268 LYS N H sing N N 269 LYS N H2 sing N N 270 LYS CA C sing N N 271 LYS CA CB sing N N 272 LYS CA HA sing N N 273 LYS C O doub N N 274 LYS C OXT sing N N 275 LYS CB CG sing N N 276 LYS CB HB2 sing N N 277 LYS CB HB3 sing N N 278 LYS CG CD sing N N 279 LYS CG HG2 sing N N 280 LYS CG HG3 sing N N 281 LYS CD CE sing N N 282 LYS CD HD2 sing N N 283 LYS CD HD3 sing N N 284 LYS CE NZ sing N N 285 LYS CE HE2 sing N N 286 LYS CE HE3 sing N N 287 LYS NZ HZ1 sing N N 288 LYS NZ HZ2 sing N N 289 LYS NZ HZ3 sing N N 290 LYS OXT HXT sing N N 291 MET N CA sing N N 292 MET N H sing N N 293 MET N H2 sing N N 294 MET CA C sing N N 295 MET CA CB sing N N 296 MET CA HA sing N N 297 MET C O doub N N 298 MET C OXT sing N N 299 MET CB CG sing N N 300 MET CB HB2 sing N N 301 MET CB HB3 sing N N 302 MET CG SD sing N N 303 MET CG HG2 sing N N 304 MET CG HG3 sing N N 305 MET SD CE sing N N 306 MET CE HE1 sing N N 307 MET CE HE2 sing N N 308 MET CE HE3 sing N N 309 MET OXT HXT sing N N 310 PHE N CA sing N N 311 PHE N H sing N N 312 PHE N H2 sing N N 313 PHE CA C sing N N 314 PHE CA CB sing N N 315 PHE CA HA sing N N 316 PHE C O doub N N 317 PHE C OXT sing N N 318 PHE CB CG sing N N 319 PHE CB HB2 sing N N 320 PHE CB HB3 sing N N 321 PHE CG CD1 doub Y N 322 PHE CG CD2 sing Y N 323 PHE CD1 CE1 sing Y N 324 PHE CD1 HD1 sing N N 325 PHE CD2 CE2 doub Y N 326 PHE CD2 HD2 sing N N 327 PHE CE1 CZ doub Y N 328 PHE CE1 HE1 sing N N 329 PHE CE2 CZ sing Y N 330 PHE CE2 HE2 sing N N 331 PHE CZ HZ sing N N 332 PHE OXT HXT sing N N 333 PRO N CA sing N N 334 PRO N CD sing N N 335 PRO N H sing N N 336 PRO CA C sing N N 337 PRO CA CB sing N N 338 PRO CA HA sing N N 339 PRO C O doub N N 340 PRO C OXT sing N N 341 PRO CB CG sing N N 342 PRO CB HB2 sing N N 343 PRO CB HB3 sing N N 344 PRO CG CD sing N N 345 PRO CG HG2 sing N N 346 PRO CG HG3 sing N N 347 PRO CD HD2 sing N N 348 PRO CD HD3 sing N N 349 PRO OXT HXT sing N N 350 SER N CA sing N N 351 SER N H sing N N 352 SER N H2 sing N N 353 SER CA C sing N N 354 SER CA CB sing N N 355 SER CA HA sing N N 356 SER C O doub N N 357 SER C OXT sing N N 358 SER CB OG sing N N 359 SER CB HB2 sing N N 360 SER CB HB3 sing N N 361 SER OG HG sing N N 362 SER OXT HXT sing N N 363 THR N CA sing N N 364 THR N H sing N N 365 THR N H2 sing N N 366 THR CA C sing N N 367 THR CA CB sing N N 368 THR CA HA sing N N 369 THR C O doub N N 370 THR C OXT sing N N 371 THR CB OG1 sing N N 372 THR CB CG2 sing N N 373 THR CB HB sing N N 374 THR OG1 HG1 sing N N 375 THR CG2 HG21 sing N N 376 THR CG2 HG22 sing N N 377 THR CG2 HG23 sing N N 378 THR OXT HXT sing N N 379 TYR N CA sing N N 380 TYR N H sing N N 381 TYR N H2 sing N N 382 TYR CA C sing N N 383 TYR CA CB sing N N 384 TYR CA HA sing N N 385 TYR C O doub N N 386 TYR C OXT sing N N 387 TYR CB CG sing N N 388 TYR CB HB2 sing N N 389 TYR CB HB3 sing N N 390 TYR CG CD1 doub Y N 391 TYR CG CD2 sing Y N 392 TYR CD1 CE1 sing Y N 393 TYR CD1 HD1 sing N N 394 TYR CD2 CE2 doub Y N 395 TYR CD2 HD2 sing N N 396 TYR CE1 CZ doub Y N 397 TYR CE1 HE1 sing N N 398 TYR CE2 CZ sing Y N 399 TYR CE2 HE2 sing N N 400 TYR CZ OH sing N N 401 TYR OH HH sing N N 402 TYR OXT HXT sing N N 403 VAL N CA sing N N 404 VAL N H sing N N 405 VAL N H2 sing N N 406 VAL CA C sing N N 407 VAL CA CB sing N N 408 VAL CA HA sing N N 409 VAL C O doub N N 410 VAL C OXT sing N N 411 VAL CB CG1 sing N N 412 VAL CB CG2 sing N N 413 VAL CB HB sing N N 414 VAL CG1 HG11 sing N N 415 VAL CG1 HG12 sing N N 416 VAL CG1 HG13 sing N N 417 VAL CG2 HG21 sing N N 418 VAL CG2 HG22 sing N N 419 VAL CG2 HG23 sing N N 420 VAL OXT HXT sing N N 421 # _pdbx_initial_refinement_model.accession_code ? _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type other _pdbx_initial_refinement_model.source_name ? _pdbx_initial_refinement_model.details 'IN HOUSE DETERMINED X-RAY STRUCTURE' # _atom_sites.entry_id 4DIJ _atom_sites.fract_transf_matrix[1][1] 0.026155 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.026155 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.005709 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CL N O S # loop_