data_4DMX
#
_entry.id 4DMX
#
_audit_conform.dict_name mmcif_pdbx.dic
_audit_conform.dict_version 5.397
_audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
#
loop_
_database_2.database_id
_database_2.database_code
_database_2.pdbx_database_accession
_database_2.pdbx_DOI
PDB 4DMX pdb_00004dmx 10.2210/pdb4dmx/pdb
RCSB RCSB070529 ? ?
WWPDB D_1000070529 ? ?
#
loop_
_pdbx_audit_revision_history.ordinal
_pdbx_audit_revision_history.data_content_type
_pdbx_audit_revision_history.major_revision
_pdbx_audit_revision_history.minor_revision
_pdbx_audit_revision_history.revision_date
1 'Structure model' 1 0 2012-07-11
2 'Structure model' 1 1 2013-01-02
3 'Structure model' 1 2 2014-11-26
4 'Structure model' 1 3 2018-01-24
5 'Structure model' 1 4 2024-10-30
#
_pdbx_audit_revision_details.ordinal 1
_pdbx_audit_revision_details.revision_ordinal 1
_pdbx_audit_revision_details.data_content_type 'Structure model'
_pdbx_audit_revision_details.provider repository
_pdbx_audit_revision_details.type 'Initial release'
_pdbx_audit_revision_details.description ?
_pdbx_audit_revision_details.details ?
#
loop_
_pdbx_audit_revision_group.ordinal
_pdbx_audit_revision_group.revision_ordinal
_pdbx_audit_revision_group.data_content_type
_pdbx_audit_revision_group.group
1 2 'Structure model' 'Database references'
2 3 'Structure model' 'Structure summary'
3 4 'Structure model' Advisory
4 4 'Structure model' 'Structure summary'
5 5 'Structure model' Advisory
6 5 'Structure model' 'Data collection'
7 5 'Structure model' 'Database references'
8 5 'Structure model' 'Derived calculations'
9 5 'Structure model' 'Structure summary'
#
loop_
_pdbx_audit_revision_category.ordinal
_pdbx_audit_revision_category.revision_ordinal
_pdbx_audit_revision_category.data_content_type
_pdbx_audit_revision_category.category
1 4 'Structure model' audit_author
2 4 'Structure model' pdbx_unobs_or_zero_occ_atoms
3 5 'Structure model' chem_comp_atom
4 5 'Structure model' chem_comp_bond
5 5 'Structure model' database_2
6 5 'Structure model' pdbx_entry_details
7 5 'Structure model' pdbx_modification_feature
8 5 'Structure model' pdbx_unobs_or_zero_occ_atoms
9 5 'Structure model' struct_conn
10 5 'Structure model' struct_site
#
loop_
_pdbx_audit_revision_item.ordinal
_pdbx_audit_revision_item.revision_ordinal
_pdbx_audit_revision_item.data_content_type
_pdbx_audit_revision_item.item
1 4 'Structure model' '_audit_author.name'
2 5 'Structure model' '_database_2.pdbx_DOI'
3 5 'Structure model' '_database_2.pdbx_database_accession'
4 5 'Structure model' '_pdbx_entry_details.has_protein_modification'
5 5 'Structure model' '_struct_conn.pdbx_leaving_atom_flag'
6 5 'Structure model' '_struct_site.pdbx_auth_asym_id'
7 5 'Structure model' '_struct_site.pdbx_auth_comp_id'
8 5 'Structure model' '_struct_site.pdbx_auth_seq_id'
#
_pdbx_database_status.status_code REL
_pdbx_database_status.entry_id 4DMX
_pdbx_database_status.recvd_initial_deposition_date 2012-02-08
_pdbx_database_status.deposit_site RCSB
_pdbx_database_status.process_site RCSB
_pdbx_database_status.status_code_sf REL
_pdbx_database_status.status_code_mr ?
_pdbx_database_status.SG_entry ?
_pdbx_database_status.status_code_cs ?
_pdbx_database_status.methods_development_category ?
_pdbx_database_status.pdb_format_compatible Y
_pdbx_database_status.status_code_nmr_data ?
#
_pdbx_database_related.db_name PDB
_pdbx_database_related.db_id 4DMY
_pdbx_database_related.details .
_pdbx_database_related.content_type unspecified
#
loop_
_audit_author.name
_audit_author.pdbx_ordinal
'Dossetter, A.G.' 1
'Beeley, H.' 2
'Bowyer, J.' 3
'Cook, C.R.' 4
'Crawford, J.J.' 5
'Finlayson, J.E.' 6
'Heron, N.M.' 7
'Heyes, C.' 8
'Highton, A.J.' 9
'Hudson, J.A.' 10
'Kenny, P.W.' 11
'Martin, S.' 12
'MacFaul, P.A.' 13
'McGuire, T.M.' 14
'Gutierrez, P.M.' 15
'Morley, A.D.' 16
'Morris, J.J.' 17
'Page, K.M.' 18
'Rosenbrier Ribeiro, L.' 19
'Sawney, H.' 20
'Steinbacher, S.' 21
'Krapp, S.' 22
'Jestel, A.' 23
'Smith, C.' 24
'Vickers, M.' 25
#
_citation.id primary
_citation.title
;(1R,2R)-N-(1-cyanocyclopropyl)-2-(6-methoxy-1,3,4,5-tetrahydropyrido[4,3-b]indole-2-carbonyl)cyclohexanecarboxamide (AZD4996): a potent and highly selective cathepsin K inhibitor for the treatment of osteoarthritis.
;
_citation.journal_abbrev J.Med.Chem.
_citation.journal_volume 55
_citation.page_first 6363
_citation.page_last 6374
_citation.year 2012
_citation.journal_id_ASTM JMCMAR
_citation.country US
_citation.journal_id_ISSN 0022-2623
_citation.journal_id_CSD 0151
_citation.book_publisher ?
_citation.pdbx_database_id_PubMed 22742641
_citation.pdbx_database_id_DOI 10.1021/jm3007257
#
loop_
_citation_author.citation_id
_citation_author.name
_citation_author.ordinal
_citation_author.identifier_ORCID
primary 'Dossetter, A.G.' 1 ?
primary 'Beeley, H.' 2 ?
primary 'Bowyer, J.' 3 ?
primary 'Cook, C.R.' 4 ?
primary 'Crawford, J.J.' 5 ?
primary 'Finlayson, J.E.' 6 ?
primary 'Heron, N.M.' 7 ?
primary 'Heyes, C.' 8 ?
primary 'Highton, A.J.' 9 ?
primary 'Hudson, J.A.' 10 ?
primary 'Jestel, A.' 11 ?
primary 'Kenny, P.W.' 12 ?
primary 'Krapp, S.' 13 ?
primary 'Martin, S.' 14 ?
primary 'MacFaul, P.A.' 15 ?
primary 'McGuire, T.M.' 16 ?
primary 'Gutierrez, P.M.' 17 ?
primary 'Morley, A.D.' 18 ?
primary 'Morris, J.J.' 19 ?
primary 'Page, K.M.' 20 ?
primary 'Ribeiro, L.R.' 21 ?
primary 'Sawney, H.' 22 ?
primary 'Steinbacher, S.' 23 ?
primary 'Smith, C.' 24 ?
primary 'Vickers, M.' 25 ?
#
loop_
_entity.id
_entity.type
_entity.src_method
_entity.pdbx_description
_entity.formula_weight
_entity.pdbx_number_of_molecules
_entity.pdbx_ec
_entity.pdbx_mutation
_entity.pdbx_fragment
_entity.details
1 polymer man 'Cathepsin K' 23523.480
1 3.4.22.38 ? 'unp residues 115-329' ?
2 non-polymer syn '(1R,2R)-N-(1-cyanocyclopropyl)-2-{[4-(4-fluorophenyl)piperazin-1-yl]carbonyl}cyclohexanecarboxamide' 398.474
1 ? ? ? ?
3 non-polymer syn GLYCEROL 92.094
1 ? ? ? ?
4 water nat water 18.015
139 ? ? ? ?
#
_entity_name_com.entity_id 1
_entity_name_com.name 'Cathepsin O, Cathepsin O2, Cathepsin X'
#
_entity_poly.entity_id 1
_entity_poly.type 'polypeptide(L)'
_entity_poly.nstd_linkage no
_entity_poly.nstd_monomer no
_entity_poly.pdbx_seq_one_letter_code
;APDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSENDGCGGGYMTNAFQYVQKNRG
IDSEDAYPYVGQEESCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSDNL
NHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYILMARNKNNACGIANLASFPKM
;
_entity_poly.pdbx_seq_one_letter_code_can
;APDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSENDGCGGGYMTNAFQYVQKNRG
IDSEDAYPYVGQEESCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSDNL
NHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYILMARNKNNACGIANLASFPKM
;
_entity_poly.pdbx_strand_id A
_entity_poly.pdbx_target_identifier ?
#
loop_
_pdbx_entity_nonpoly.entity_id
_pdbx_entity_nonpoly.name
_pdbx_entity_nonpoly.comp_id
2 '(1R,2R)-N-(1-cyanocyclopropyl)-2-{[4-(4-fluorophenyl)piperazin-1-yl]carbonyl}cyclohexanecarboxamide' 0LB
3 GLYCEROL GOL
4 water HOH
#
loop_
_entity_poly_seq.entity_id
_entity_poly_seq.num
_entity_poly_seq.mon_id
_entity_poly_seq.hetero
1 1 ALA n
1 2 PRO n
1 3 ASP n
1 4 SER n
1 5 VAL n
1 6 ASP n
1 7 TYR n
1 8 ARG n
1 9 LYS n
1 10 LYS n
1 11 GLY n
1 12 TYR n
1 13 VAL n
1 14 THR n
1 15 PRO n
1 16 VAL n
1 17 LYS n
1 18 ASN n
1 19 GLN n
1 20 GLY n
1 21 GLN n
1 22 CYS n
1 23 GLY n
1 24 SER n
1 25 CYS n
1 26 TRP n
1 27 ALA n
1 28 PHE n
1 29 SER n
1 30 SER n
1 31 VAL n
1 32 GLY n
1 33 ALA n
1 34 LEU n
1 35 GLU n
1 36 GLY n
1 37 GLN n
1 38 LEU n
1 39 LYS n
1 40 LYS n
1 41 LYS n
1 42 THR n
1 43 GLY n
1 44 LYS n
1 45 LEU n
1 46 LEU n
1 47 ASN n
1 48 LEU n
1 49 SER n
1 50 PRO n
1 51 GLN n
1 52 ASN n
1 53 LEU n
1 54 VAL n
1 55 ASP n
1 56 CYS n
1 57 VAL n
1 58 SER n
1 59 GLU n
1 60 ASN n
1 61 ASP n
1 62 GLY n
1 63 CYS n
1 64 GLY n
1 65 GLY n
1 66 GLY n
1 67 TYR n
1 68 MET n
1 69 THR n
1 70 ASN n
1 71 ALA n
1 72 PHE n
1 73 GLN n
1 74 TYR n
1 75 VAL n
1 76 GLN n
1 77 LYS n
1 78 ASN n
1 79 ARG n
1 80 GLY n
1 81 ILE n
1 82 ASP n
1 83 SER n
1 84 GLU n
1 85 ASP n
1 86 ALA n
1 87 TYR n
1 88 PRO n
1 89 TYR n
1 90 VAL n
1 91 GLY n
1 92 GLN n
1 93 GLU n
1 94 GLU n
1 95 SER n
1 96 CYS n
1 97 MET n
1 98 TYR n
1 99 ASN n
1 100 PRO n
1 101 THR n
1 102 GLY n
1 103 LYS n
1 104 ALA n
1 105 ALA n
1 106 LYS n
1 107 CYS n
1 108 ARG n
1 109 GLY n
1 110 TYR n
1 111 ARG n
1 112 GLU n
1 113 ILE n
1 114 PRO n
1 115 GLU n
1 116 GLY n
1 117 ASN n
1 118 GLU n
1 119 LYS n
1 120 ALA n
1 121 LEU n
1 122 LYS n
1 123 ARG n
1 124 ALA n
1 125 VAL n
1 126 ALA n
1 127 ARG n
1 128 VAL n
1 129 GLY n
1 130 PRO n
1 131 VAL n
1 132 SER n
1 133 VAL n
1 134 ALA n
1 135 ILE n
1 136 ASP n
1 137 ALA n
1 138 SER n
1 139 LEU n
1 140 THR n
1 141 SER n
1 142 PHE n
1 143 GLN n
1 144 PHE n
1 145 TYR n
1 146 SER n
1 147 LYS n
1 148 GLY n
1 149 VAL n
1 150 TYR n
1 151 TYR n
1 152 ASP n
1 153 GLU n
1 154 SER n
1 155 CYS n
1 156 ASN n
1 157 SER n
1 158 ASP n
1 159 ASN n
1 160 LEU n
1 161 ASN n
1 162 HIS n
1 163 ALA n
1 164 VAL n
1 165 LEU n
1 166 ALA n
1 167 VAL n
1 168 GLY n
1 169 TYR n
1 170 GLY n
1 171 ILE n
1 172 GLN n
1 173 LYS n
1 174 GLY n
1 175 ASN n
1 176 LYS n
1 177 HIS n
1 178 TRP n
1 179 ILE n
1 180 ILE n
1 181 LYS n
1 182 ASN n
1 183 SER n
1 184 TRP n
1 185 GLY n
1 186 GLU n
1 187 ASN n
1 188 TRP n
1 189 GLY n
1 190 ASN n
1 191 LYS n
1 192 GLY n
1 193 TYR n
1 194 ILE n
1 195 LEU n
1 196 MET n
1 197 ALA n
1 198 ARG n
1 199 ASN n
1 200 LYS n
1 201 ASN n
1 202 ASN n
1 203 ALA n
1 204 CYS n
1 205 GLY n
1 206 ILE n
1 207 ALA n
1 208 ASN n
1 209 LEU n
1 210 ALA n
1 211 SER n
1 212 PHE n
1 213 PRO n
1 214 LYS n
1 215 MET n
#
_entity_src_gen.entity_id 1
_entity_src_gen.pdbx_src_id 1
_entity_src_gen.pdbx_alt_source_flag sample
_entity_src_gen.pdbx_seq_type ?
_entity_src_gen.pdbx_beg_seq_num ?
_entity_src_gen.pdbx_end_seq_num ?
_entity_src_gen.gene_src_common_name human
_entity_src_gen.gene_src_genus ?
_entity_src_gen.pdbx_gene_src_gene 'CTSK, CTSO, CTSO2'
_entity_src_gen.gene_src_species ?
_entity_src_gen.gene_src_strain ?
_entity_src_gen.gene_src_tissue ?
_entity_src_gen.gene_src_tissue_fraction ?
_entity_src_gen.gene_src_details 'refolding from inclusion bodies'
_entity_src_gen.pdbx_gene_src_fragment ?
_entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens'
_entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606
_entity_src_gen.pdbx_gene_src_variant ?
_entity_src_gen.pdbx_gene_src_cell_line ?
_entity_src_gen.pdbx_gene_src_atcc ?
_entity_src_gen.pdbx_gene_src_organ ?
_entity_src_gen.pdbx_gene_src_organelle ?
_entity_src_gen.pdbx_gene_src_cell ?
_entity_src_gen.pdbx_gene_src_cellular_location ?
_entity_src_gen.host_org_common_name ?
_entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli'
_entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562
_entity_src_gen.host_org_genus ?
_entity_src_gen.pdbx_host_org_gene ?
_entity_src_gen.pdbx_host_org_organ ?
_entity_src_gen.host_org_species ?
_entity_src_gen.pdbx_host_org_tissue ?
_entity_src_gen.pdbx_host_org_tissue_fraction ?
_entity_src_gen.pdbx_host_org_strain ?
_entity_src_gen.pdbx_host_org_variant ?
_entity_src_gen.pdbx_host_org_cell_line ?
_entity_src_gen.pdbx_host_org_atcc ?
_entity_src_gen.pdbx_host_org_culture_collection ?
_entity_src_gen.pdbx_host_org_cell ?
_entity_src_gen.pdbx_host_org_organelle ?
_entity_src_gen.pdbx_host_org_cellular_location ?
_entity_src_gen.pdbx_host_org_vector_type ?
_entity_src_gen.pdbx_host_org_vector ?
_entity_src_gen.host_org_details ?
_entity_src_gen.expression_system_id ?
_entity_src_gen.plasmid_name ?
_entity_src_gen.plasmid_details ?
_entity_src_gen.pdbx_description ?
#
loop_
_chem_comp.id
_chem_comp.type
_chem_comp.mon_nstd_flag
_chem_comp.name
_chem_comp.pdbx_synonyms
_chem_comp.formula
_chem_comp.formula_weight
0LB non-polymer . '(1R,2R)-N-(1-cyanocyclopropyl)-2-{[4-(4-fluorophenyl)piperazin-1-yl]carbonyl}cyclohexanecarboxamide' ?
'C22 H27 F N4 O2' 398.474
ALA 'L-peptide linking' y ALANINE ?
'C3 H7 N O2' 89.093
ARG 'L-peptide linking' y ARGININE ?
'C6 H15 N4 O2 1' 175.209
ASN 'L-peptide linking' y ASPARAGINE ?
'C4 H8 N2 O3' 132.118
ASP 'L-peptide linking' y 'ASPARTIC ACID' ?
'C4 H7 N O4' 133.103
CYS 'L-peptide linking' y CYSTEINE ?
'C3 H7 N O2 S' 121.158
GLN 'L-peptide linking' y GLUTAMINE ?
'C5 H10 N2 O3' 146.144
GLU 'L-peptide linking' y 'GLUTAMIC ACID' ?
'C5 H9 N O4' 147.129
GLY 'peptide linking' y GLYCINE ?
'C2 H5 N O2' 75.067
GOL non-polymer . GLYCEROL
'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094
HIS 'L-peptide linking' y HISTIDINE ?
'C6 H10 N3 O2 1' 156.162
HOH non-polymer . WATER ?
'H2 O' 18.015
ILE 'L-peptide linking' y ISOLEUCINE ?
'C6 H13 N O2' 131.173
LEU 'L-peptide linking' y LEUCINE ?
'C6 H13 N O2' 131.173
LYS 'L-peptide linking' y LYSINE ?
'C6 H15 N2 O2 1' 147.195
MET 'L-peptide linking' y METHIONINE ?
'C5 H11 N O2 S' 149.211
PHE 'L-peptide linking' y PHENYLALANINE ?
'C9 H11 N O2' 165.189
PRO 'L-peptide linking' y PROLINE ?
'C5 H9 N O2' 115.130
SER 'L-peptide linking' y SERINE ?
'C3 H7 N O3' 105.093
THR 'L-peptide linking' y THREONINE ?
'C4 H9 N O3' 119.119
TRP 'L-peptide linking' y TRYPTOPHAN ?
'C11 H12 N2 O2' 204.225
TYR 'L-peptide linking' y TYROSINE ?
'C9 H11 N O3' 181.189
VAL 'L-peptide linking' y VALINE ?
'C5 H11 N O2' 117.146
#
loop_
_pdbx_poly_seq_scheme.asym_id
_pdbx_poly_seq_scheme.entity_id
_pdbx_poly_seq_scheme.seq_id
_pdbx_poly_seq_scheme.mon_id
_pdbx_poly_seq_scheme.ndb_seq_num
_pdbx_poly_seq_scheme.pdb_seq_num
_pdbx_poly_seq_scheme.auth_seq_num
_pdbx_poly_seq_scheme.pdb_mon_id
_pdbx_poly_seq_scheme.auth_mon_id
_pdbx_poly_seq_scheme.pdb_strand_id
_pdbx_poly_seq_scheme.pdb_ins_code
_pdbx_poly_seq_scheme.hetero
A 1 1 ALA 1 1 1 ALA ALA A . n
A 1 2 PRO 2 2 2 PRO PRO A . n
A 1 3 ASP 3 3 3 ASP ASP A . n
A 1 4 SER 4 4 4 SER SER A . n
A 1 5 VAL 5 5 5 VAL VAL A . n
A 1 6 ASP 6 6 6 ASP ASP A . n
A 1 7 TYR 7 7 7 TYR TYR A . n
A 1 8 ARG 8 8 8 ARG ARG A . n
A 1 9 LYS 9 9 9 LYS LYS A . n
A 1 10 LYS 10 10 10 LYS LYS A . n
A 1 11 GLY 11 11 11 GLY GLY A . n
A 1 12 TYR 12 12 12 TYR TYR A . n
A 1 13 VAL 13 13 13 VAL VAL A . n
A 1 14 THR 14 14 14 THR THR A . n
A 1 15 PRO 15 15 15 PRO PRO A . n
A 1 16 VAL 16 16 16 VAL VAL A . n
A 1 17 LYS 17 17 17 LYS LYS A . n
A 1 18 ASN 18 18 18 ASN ASN A . n
A 1 19 GLN 19 19 19 GLN GLN A . n
A 1 20 GLY 20 20 20 GLY GLY A . n
A 1 21 GLN 21 21 21 GLN GLN A . n
A 1 22 CYS 22 22 22 CYS CYS A . n
A 1 23 GLY 23 23 23 GLY GLY A . n
A 1 24 SER 24 24 24 SER SER A . n
A 1 25 CYS 25 25 25 CYS CYS A . n
A 1 26 TRP 26 26 26 TRP TRP A . n
A 1 27 ALA 27 27 27 ALA ALA A . n
A 1 28 PHE 28 28 28 PHE PHE A . n
A 1 29 SER 29 29 29 SER SER A . n
A 1 30 SER 30 30 30 SER SER A . n
A 1 31 VAL 31 31 31 VAL VAL A . n
A 1 32 GLY 32 32 32 GLY GLY A . n
A 1 33 ALA 33 33 33 ALA ALA A . n
A 1 34 LEU 34 34 34 LEU LEU A . n
A 1 35 GLU 35 35 35 GLU GLU A . n
A 1 36 GLY 36 36 36 GLY GLY A . n
A 1 37 GLN 37 37 37 GLN GLN A . n
A 1 38 LEU 38 38 38 LEU LEU A . n
A 1 39 LYS 39 39 39 LYS LYS A . n
A 1 40 LYS 40 40 40 LYS LYS A . n
A 1 41 LYS 41 41 41 LYS LYS A . n
A 1 42 THR 42 42 42 THR THR A . n
A 1 43 GLY 43 43 43 GLY GLY A . n
A 1 44 LYS 44 44 44 LYS LYS A . n
A 1 45 LEU 45 45 45 LEU LEU A . n
A 1 46 LEU 46 46 46 LEU LEU A . n
A 1 47 ASN 47 47 47 ASN ASN A . n
A 1 48 LEU 48 48 48 LEU LEU A . n
A 1 49 SER 49 49 49 SER SER A . n
A 1 50 PRO 50 50 50 PRO PRO A . n
A 1 51 GLN 51 51 51 GLN GLN A . n
A 1 52 ASN 52 52 52 ASN ASN A . n
A 1 53 LEU 53 53 53 LEU LEU A . n
A 1 54 VAL 54 54 54 VAL VAL A . n
A 1 55 ASP 55 55 55 ASP ASP A . n
A 1 56 CYS 56 56 56 CYS CYS A . n
A 1 57 VAL 57 57 57 VAL VAL A . n
A 1 58 SER 58 58 58 SER SER A . n
A 1 59 GLU 59 59 59 GLU GLU A . n
A 1 60 ASN 60 60 60 ASN ASN A . n
A 1 61 ASP 61 61 61 ASP ASP A . n
A 1 62 GLY 62 62 62 GLY GLY A . n
A 1 63 CYS 63 63 63 CYS CYS A . n
A 1 64 GLY 64 64 64 GLY GLY A . n
A 1 65 GLY 65 65 65 GLY GLY A . n
A 1 66 GLY 66 66 66 GLY GLY A . n
A 1 67 TYR 67 67 67 TYR TYR A . n
A 1 68 MET 68 68 68 MET MET A . n
A 1 69 THR 69 69 69 THR THR A . n
A 1 70 ASN 70 70 70 ASN ASN A . n
A 1 71 ALA 71 71 71 ALA ALA A . n
A 1 72 PHE 72 72 72 PHE PHE A . n
A 1 73 GLN 73 73 73 GLN GLN A . n
A 1 74 TYR 74 74 74 TYR TYR A . n
A 1 75 VAL 75 75 75 VAL VAL A . n
A 1 76 GLN 76 76 76 GLN GLN A . n
A 1 77 LYS 77 77 77 LYS LYS A . n
A 1 78 ASN 78 78 78 ASN ASN A . n
A 1 79 ARG 79 79 79 ARG ARG A . n
A 1 80 GLY 80 80 80 GLY GLY A . n
A 1 81 ILE 81 81 81 ILE ILE A . n
A 1 82 ASP 82 82 82 ASP ASP A . n
A 1 83 SER 83 83 83 SER SER A . n
A 1 84 GLU 84 84 84 GLU GLU A . n
A 1 85 ASP 85 85 85 ASP ASP A . n
A 1 86 ALA 86 86 86 ALA ALA A . n
A 1 87 TYR 87 87 87 TYR TYR A . n
A 1 88 PRO 88 88 88 PRO PRO A . n
A 1 89 TYR 89 89 89 TYR TYR A . n
A 1 90 VAL 90 90 90 VAL VAL A . n
A 1 91 GLY 91 91 91 GLY GLY A . n
A 1 92 GLN 92 92 92 GLN GLN A . n
A 1 93 GLU 93 93 93 GLU GLU A . n
A 1 94 GLU 94 94 94 GLU GLU A . n
A 1 95 SER 95 95 95 SER SER A . n
A 1 96 CYS 96 96 96 CYS CYS A . n
A 1 97 MET 97 97 97 MET MET A . n
A 1 98 TYR 98 98 98 TYR TYR A . n
A 1 99 ASN 99 99 99 ASN ASN A . n
A 1 100 PRO 100 100 100 PRO PRO A . n
A 1 101 THR 101 101 101 THR THR A . n
A 1 102 GLY 102 102 102 GLY GLY A . n
A 1 103 LYS 103 103 103 LYS LYS A . n
A 1 104 ALA 104 104 104 ALA ALA A . n
A 1 105 ALA 105 105 105 ALA ALA A . n
A 1 106 LYS 106 106 106 LYS LYS A . n
A 1 107 CYS 107 107 107 CYS CYS A . n
A 1 108 ARG 108 108 108 ARG ARG A . n
A 1 109 GLY 109 109 109 GLY GLY A . n
A 1 110 TYR 110 110 110 TYR TYR A . n
A 1 111 ARG 111 111 111 ARG ARG A . n
A 1 112 GLU 112 112 112 GLU GLU A . n
A 1 113 ILE 113 113 113 ILE ILE A . n
A 1 114 PRO 114 114 114 PRO PRO A . n
A 1 115 GLU 115 115 115 GLU GLU A . n
A 1 116 GLY 116 116 116 GLY GLY A . n
A 1 117 ASN 117 117 117 ASN ASN A . n
A 1 118 GLU 118 118 118 GLU GLU A . n
A 1 119 LYS 119 119 119 LYS LYS A . n
A 1 120 ALA 120 120 120 ALA ALA A . n
A 1 121 LEU 121 121 121 LEU LEU A . n
A 1 122 LYS 122 122 122 LYS LYS A . n
A 1 123 ARG 123 123 123 ARG ARG A . n
A 1 124 ALA 124 124 124 ALA ALA A . n
A 1 125 VAL 125 125 125 VAL VAL A . n
A 1 126 ALA 126 126 126 ALA ALA A . n
A 1 127 ARG 127 127 127 ARG ARG A . n
A 1 128 VAL 128 128 128 VAL VAL A . n
A 1 129 GLY 129 129 129 GLY GLY A . n
A 1 130 PRO 130 130 130 PRO PRO A . n
A 1 131 VAL 131 131 131 VAL VAL A . n
A 1 132 SER 132 132 132 SER SER A . n
A 1 133 VAL 133 133 133 VAL VAL A . n
A 1 134 ALA 134 134 134 ALA ALA A . n
A 1 135 ILE 135 135 135 ILE ILE A . n
A 1 136 ASP 136 136 136 ASP ASP A . n
A 1 137 ALA 137 137 137 ALA ALA A . n
A 1 138 SER 138 138 138 SER SER A . n
A 1 139 LEU 139 139 139 LEU LEU A . n
A 1 140 THR 140 140 140 THR THR A . n
A 1 141 SER 141 141 141 SER SER A . n
A 1 142 PHE 142 142 142 PHE PHE A . n
A 1 143 GLN 143 143 143 GLN GLN A . n
A 1 144 PHE 144 144 144 PHE PHE A . n
A 1 145 TYR 145 145 145 TYR TYR A . n
A 1 146 SER 146 146 146 SER SER A . n
A 1 147 LYS 147 147 147 LYS LYS A . n
A 1 148 GLY 148 148 148 GLY GLY A . n
A 1 149 VAL 149 149 149 VAL VAL A . n
A 1 150 TYR 150 150 150 TYR TYR A . n
A 1 151 TYR 151 151 151 TYR TYR A . n
A 1 152 ASP 152 152 152 ASP ASP A . n
A 1 153 GLU 153 153 153 GLU GLU A . n
A 1 154 SER 154 154 154 SER SER A . n
A 1 155 CYS 155 155 155 CYS CYS A . n
A 1 156 ASN 156 156 156 ASN ASN A . n
A 1 157 SER 157 157 157 SER SER A . n
A 1 158 ASP 158 158 158 ASP ASP A . n
A 1 159 ASN 159 159 159 ASN ASN A . n
A 1 160 LEU 160 160 160 LEU LEU A . n
A 1 161 ASN 161 161 161 ASN ASN A . n
A 1 162 HIS 162 162 162 HIS HIS A . n
A 1 163 ALA 163 163 163 ALA ALA A . n
A 1 164 VAL 164 164 164 VAL VAL A . n
A 1 165 LEU 165 165 165 LEU LEU A . n
A 1 166 ALA 166 166 166 ALA ALA A . n
A 1 167 VAL 167 167 167 VAL VAL A . n
A 1 168 GLY 168 168 168 GLY GLY A . n
A 1 169 TYR 169 169 169 TYR TYR A . n
A 1 170 GLY 170 170 170 GLY GLY A . n
A 1 171 ILE 171 171 171 ILE ILE A . n
A 1 172 GLN 172 172 172 GLN GLN A . n
A 1 173 LYS 173 173 173 LYS LYS A . n
A 1 174 GLY 174 174 174 GLY GLY A . n
A 1 175 ASN 175 175 175 ASN ASN A . n
A 1 176 LYS 176 176 176 LYS LYS A . n
A 1 177 HIS 177 177 177 HIS HIS A . n
A 1 178 TRP 178 178 178 TRP TRP A . n
A 1 179 ILE 179 179 179 ILE ILE A . n
A 1 180 ILE 180 180 180 ILE ILE A . n
A 1 181 LYS 181 181 181 LYS LYS A . n
A 1 182 ASN 182 182 182 ASN ASN A . n
A 1 183 SER 183 183 183 SER SER A . n
A 1 184 TRP 184 184 184 TRP TRP A . n
A 1 185 GLY 185 185 185 GLY GLY A . n
A 1 186 GLU 186 186 186 GLU GLU A . n
A 1 187 ASN 187 187 187 ASN ASN A . n
A 1 188 TRP 188 188 188 TRP TRP A . n
A 1 189 GLY 189 189 189 GLY GLY A . n
A 1 190 ASN 190 190 190 ASN ASN A . n
A 1 191 LYS 191 191 191 LYS LYS A . n
A 1 192 GLY 192 192 192 GLY GLY A . n
A 1 193 TYR 193 193 193 TYR TYR A . n
A 1 194 ILE 194 194 194 ILE ILE A . n
A 1 195 LEU 195 195 195 LEU LEU A . n
A 1 196 MET 196 196 196 MET MET A . n
A 1 197 ALA 197 197 197 ALA ALA A . n
A 1 198 ARG 198 198 198 ARG ARG A . n
A 1 199 ASN 199 199 199 ASN ASN A . n
A 1 200 LYS 200 200 200 LYS LYS A . n
A 1 201 ASN 201 201 201 ASN ASN A . n
A 1 202 ASN 202 202 202 ASN ASN A . n
A 1 203 ALA 203 203 203 ALA ALA A . n
A 1 204 CYS 204 204 204 CYS CYS A . n
A 1 205 GLY 205 205 205 GLY GLY A . n
A 1 206 ILE 206 206 206 ILE ILE A . n
A 1 207 ALA 207 207 207 ALA ALA A . n
A 1 208 ASN 208 208 208 ASN ASN A . n
A 1 209 LEU 209 209 209 LEU LEU A . n
A 1 210 ALA 210 210 210 ALA ALA A . n
A 1 211 SER 211 211 211 SER SER A . n
A 1 212 PHE 212 212 212 PHE PHE A . n
A 1 213 PRO 213 213 213 PRO PRO A . n
A 1 214 LYS 214 214 214 LYS LYS A . n
A 1 215 MET 215 215 215 MET MET A . n
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 0LB 1 301 1 0LB INX A .
C 3 GOL 1 302 1 GOL GOL A .
D 4 HOH 1 401 1 HOH HOH A .
D 4 HOH 2 402 2 HOH HOH A .
D 4 HOH 3 403 3 HOH HOH A .
D 4 HOH 4 404 4 HOH HOH A .
D 4 HOH 5 405 5 HOH HOH A .
D 4 HOH 6 406 6 HOH HOH A .
D 4 HOH 7 407 7 HOH HOH A .
D 4 HOH 8 408 8 HOH HOH A .
D 4 HOH 9 409 9 HOH HOH A .
D 4 HOH 10 410 10 HOH HOH A .
D 4 HOH 11 411 11 HOH HOH A .
D 4 HOH 12 412 12 HOH HOH A .
D 4 HOH 13 413 13 HOH HOH A .
D 4 HOH 14 414 14 HOH HOH A .
D 4 HOH 15 415 15 HOH HOH A .
D 4 HOH 16 416 16 HOH HOH A .
D 4 HOH 17 417 17 HOH HOH A .
D 4 HOH 18 418 18 HOH HOH A .
D 4 HOH 19 419 19 HOH HOH A .
D 4 HOH 20 420 20 HOH HOH A .
D 4 HOH 21 421 21 HOH HOH A .
D 4 HOH 22 422 22 HOH HOH A .
D 4 HOH 23 423 23 HOH HOH A .
D 4 HOH 24 424 24 HOH HOH A .
D 4 HOH 25 425 25 HOH HOH A .
D 4 HOH 26 426 26 HOH HOH A .
D 4 HOH 27 427 27 HOH HOH A .
D 4 HOH 28 428 28 HOH HOH A .
D 4 HOH 29 429 29 HOH HOH A .
D 4 HOH 30 430 30 HOH HOH A .
D 4 HOH 31 431 31 HOH HOH A .
D 4 HOH 32 432 32 HOH HOH A .
D 4 HOH 33 433 33 HOH HOH A .
D 4 HOH 34 434 34 HOH HOH A .
D 4 HOH 35 435 35 HOH HOH A .
D 4 HOH 36 436 36 HOH HOH A .
D 4 HOH 37 437 37 HOH HOH A .
D 4 HOH 38 438 38 HOH HOH A .
D 4 HOH 39 439 39 HOH HOH A .
D 4 HOH 40 440 40 HOH HOH A .
D 4 HOH 41 441 41 HOH HOH A .
D 4 HOH 42 442 42 HOH HOH A .
D 4 HOH 43 443 43 HOH HOH A .
D 4 HOH 44 444 44 HOH HOH A .
D 4 HOH 45 445 45 HOH HOH A .
D 4 HOH 46 446 46 HOH HOH A .
D 4 HOH 47 447 47 HOH HOH A .
D 4 HOH 48 448 48 HOH HOH A .
D 4 HOH 49 449 49 HOH HOH A .
D 4 HOH 50 450 50 HOH HOH A .
D 4 HOH 51 451 51 HOH HOH A .
D 4 HOH 52 452 52 HOH HOH A .
D 4 HOH 53 453 53 HOH HOH A .
D 4 HOH 54 454 54 HOH HOH A .
D 4 HOH 55 455 55 HOH HOH A .
D 4 HOH 56 456 56 HOH HOH A .
D 4 HOH 57 457 57 HOH HOH A .
D 4 HOH 58 458 58 HOH HOH A .
D 4 HOH 59 459 59 HOH HOH A .
D 4 HOH 60 460 60 HOH HOH A .
D 4 HOH 61 461 61 HOH HOH A .
D 4 HOH 62 462 62 HOH HOH A .
D 4 HOH 63 463 63 HOH HOH A .
D 4 HOH 64 464 64 HOH HOH A .
D 4 HOH 65 465 65 HOH HOH A .
D 4 HOH 66 466 66 HOH HOH A .
D 4 HOH 67 467 67 HOH HOH A .
D 4 HOH 68 468 68 HOH HOH A .
D 4 HOH 69 469 69 HOH HOH A .
D 4 HOH 70 470 70 HOH HOH A .
D 4 HOH 71 471 71 HOH HOH A .
D 4 HOH 72 472 72 HOH HOH A .
D 4 HOH 73 473 73 HOH HOH A .
D 4 HOH 74 474 74 HOH HOH A .
D 4 HOH 75 475 75 HOH HOH A .
D 4 HOH 76 476 76 HOH HOH A .
D 4 HOH 77 477 77 HOH HOH A .
D 4 HOH 78 478 78 HOH HOH A .
D 4 HOH 79 479 79 HOH HOH A .
D 4 HOH 80 480 80 HOH HOH A .
D 4 HOH 81 481 81 HOH HOH A .
D 4 HOH 82 482 82 HOH HOH A .
D 4 HOH 83 483 83 HOH HOH A .
D 4 HOH 84 484 84 HOH HOH A .
D 4 HOH 85 485 85 HOH HOH A .
D 4 HOH 86 486 86 HOH HOH A .
D 4 HOH 87 487 87 HOH HOH A .
D 4 HOH 88 488 88 HOH HOH A .
D 4 HOH 89 489 89 HOH HOH A .
D 4 HOH 90 490 90 HOH HOH A .
D 4 HOH 91 491 91 HOH HOH A .
D 4 HOH 92 492 92 HOH HOH A .
D 4 HOH 93 493 93 HOH HOH A .
D 4 HOH 94 494 94 HOH HOH A .
D 4 HOH 95 495 95 HOH HOH A .
D 4 HOH 96 496 96 HOH HOH A .
D 4 HOH 97 497 97 HOH HOH A .
D 4 HOH 98 498 98 HOH HOH A .
D 4 HOH 99 499 99 HOH HOH A .
D 4 HOH 100 500 100 HOH HOH A .
D 4 HOH 101 501 101 HOH HOH A .
D 4 HOH 102 502 102 HOH HOH A .
D 4 HOH 103 503 103 HOH HOH A .
D 4 HOH 104 504 104 HOH HOH A .
D 4 HOH 105 505 105 HOH HOH A .
D 4 HOH 106 506 106 HOH HOH A .
D 4 HOH 107 507 107 HOH HOH A .
D 4 HOH 108 508 108 HOH HOH A .
D 4 HOH 109 509 109 HOH HOH A .
D 4 HOH 110 510 110 HOH HOH A .
D 4 HOH 111 511 111 HOH HOH A .
D 4 HOH 112 512 112 HOH HOH A .
D 4 HOH 113 513 113 HOH HOH A .
D 4 HOH 114 514 114 HOH HOH A .
D 4 HOH 115 515 115 HOH HOH A .
D 4 HOH 116 516 116 HOH HOH A .
D 4 HOH 117 517 117 HOH HOH A .
D 4 HOH 118 518 118 HOH HOH A .
D 4 HOH 119 519 119 HOH HOH A .
D 4 HOH 120 520 120 HOH HOH A .
D 4 HOH 121 521 121 HOH HOH A .
D 4 HOH 122 522 123 HOH HOH A .
D 4 HOH 123 523 124 HOH HOH A .
D 4 HOH 124 524 125 HOH HOH A .
D 4 HOH 125 525 126 HOH HOH A .
D 4 HOH 126 526 127 HOH HOH A .
D 4 HOH 127 527 128 HOH HOH A .
D 4 HOH 128 528 129 HOH HOH A .
D 4 HOH 129 529 130 HOH HOH A .
D 4 HOH 130 530 131 HOH HOH A .
D 4 HOH 131 531 132 HOH HOH A .
D 4 HOH 132 532 133 HOH HOH A .
D 4 HOH 133 533 134 HOH HOH A .
D 4 HOH 134 534 135 HOH HOH A .
D 4 HOH 135 535 136 HOH HOH A .
D 4 HOH 136 536 137 HOH HOH A .
D 4 HOH 137 537 138 HOH HOH A .
D 4 HOH 138 538 139 HOH HOH A .
D 4 HOH 139 539 140 HOH HOH A .
#
loop_
_pdbx_unobs_or_zero_occ_atoms.id
_pdbx_unobs_or_zero_occ_atoms.PDB_model_num
_pdbx_unobs_or_zero_occ_atoms.polymer_flag
_pdbx_unobs_or_zero_occ_atoms.occupancy_flag
_pdbx_unobs_or_zero_occ_atoms.auth_asym_id
_pdbx_unobs_or_zero_occ_atoms.auth_comp_id
_pdbx_unobs_or_zero_occ_atoms.auth_seq_id
_pdbx_unobs_or_zero_occ_atoms.PDB_ins_code
_pdbx_unobs_or_zero_occ_atoms.auth_atom_id
_pdbx_unobs_or_zero_occ_atoms.label_alt_id
_pdbx_unobs_or_zero_occ_atoms.label_asym_id
_pdbx_unobs_or_zero_occ_atoms.label_comp_id
_pdbx_unobs_or_zero_occ_atoms.label_seq_id
_pdbx_unobs_or_zero_occ_atoms.label_atom_id
1 1 Y 0 A LYS 147 ? CE ? A LYS 147 CE
2 1 Y 0 A LYS 147 ? NZ ? A LYS 147 NZ
3 1 Y 0 A GLU 186 ? CD ? A GLU 186 CD
4 1 Y 0 A GLU 186 ? OE1 ? A GLU 186 OE1
5 1 Y 0 A GLU 186 ? OE2 ? A GLU 186 OE2
6 1 Y 0 A LYS 214 ? CD ? A LYS 214 CD
7 1 Y 0 A LYS 214 ? CE ? A LYS 214 CE
8 1 Y 0 A LYS 214 ? NZ ? A LYS 214 NZ
#
loop_
_software.name
_software.classification
_software.version
_software.citation_id
_software.pdbx_ordinal
PXSOFT 'data collection' . ? 1
MOLREP phasing . ? 2
REFMAC refinement 5.2.0005 ? 3
MOSFLM 'data reduction' . ? 4
SCALA 'data scaling' . ? 5
#
_cell.entry_id 4DMX
_cell.length_a 32.362
_cell.length_b 83.958
_cell.length_c 35.999
_cell.angle_alpha 90.00
_cell.angle_beta 109.96
_cell.angle_gamma 90.00
_cell.Z_PDB 2
_cell.pdbx_unique_axis ?
_cell.length_a_esd ?
_cell.length_b_esd ?
_cell.length_c_esd ?
_cell.angle_alpha_esd ?
_cell.angle_beta_esd ?
_cell.angle_gamma_esd ?
#
_symmetry.entry_id 4DMX
_symmetry.space_group_name_H-M 'P 1 21 1'
_symmetry.pdbx_full_space_group_name_H-M ?
_symmetry.cell_setting ?
_symmetry.Int_Tables_number 4
_symmetry.space_group_name_Hall ?
#
_exptl.entry_id 4DMX
_exptl.method 'X-RAY DIFFRACTION'
_exptl.crystals_number 1
#
_exptl_crystal.id 1
_exptl_crystal.density_meas ?
_exptl_crystal.density_Matthews 1.95
_exptl_crystal.density_percent_sol 37.06
_exptl_crystal.description ?
_exptl_crystal.F_000 ?
_exptl_crystal.preparation ?
#
_exptl_crystal_grow.crystal_id 1
_exptl_crystal_grow.method 'VAPOR DIFFUSION'
_exptl_crystal_grow.temp 293
_exptl_crystal_grow.temp_details ?
_exptl_crystal_grow.pH 5.5
_exptl_crystal_grow.pdbx_details 'PEG, pH 5.5, VAPOR DIFFUSION, temperature 293K'
_exptl_crystal_grow.pdbx_pH_range ?
#
_diffrn.id 1
_diffrn.ambient_temp 100
_diffrn.ambient_temp_details ?
_diffrn.crystal_id 1
#
_diffrn_detector.diffrn_id 1
_diffrn_detector.detector CCD
_diffrn_detector.type 'ADSC QUANTUM 315'
_diffrn_detector.pdbx_collection_date 2006-07-27
_diffrn_detector.details
'Liquid nitrogen cooled channel-cut silicon monochromator and a cylindrical grazing incidence mirror'
#
_diffrn_radiation.diffrn_id 1
_diffrn_radiation.wavelength_id 1
_diffrn_radiation.pdbx_monochromatic_or_laue_m_l M
_diffrn_radiation.monochromator 'high resolution Si(311) cut and a lower resolution Si(111) cut'
_diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH'
_diffrn_radiation.pdbx_scattering_type x-ray
#
_diffrn_radiation_wavelength.id 1
_diffrn_radiation_wavelength.wavelength 1.0370
_diffrn_radiation_wavelength.wt 1.0
#
_diffrn_source.diffrn_id 1
_diffrn_source.source SYNCHROTRON
_diffrn_source.type 'ESRF BEAMLINE ID29'
_diffrn_source.pdbx_synchrotron_site ESRF
_diffrn_source.pdbx_synchrotron_beamline ID29
_diffrn_source.pdbx_wavelength ?
_diffrn_source.pdbx_wavelength_list 1.0370
#
_reflns.entry_id 4DMX
_reflns.observed_criterion_sigma_I 0
_reflns.observed_criterion_sigma_F 0
_reflns.d_resolution_low 83
_reflns.d_resolution_high 1.70
_reflns.number_obs 19225
_reflns.number_all 19225
_reflns.percent_possible_obs 96.6
_reflns.pdbx_Rmerge_I_obs ?
_reflns.pdbx_Rsym_value 0.123
_reflns.pdbx_netI_over_sigmaI 3.2
_reflns.B_iso_Wilson_estimate 19.878
_reflns.pdbx_redundancy 3.3
_reflns.R_free_details ?
_reflns.limit_h_max ?
_reflns.limit_h_min ?
_reflns.limit_k_max ?
_reflns.limit_k_min ?
_reflns.limit_l_max ?
_reflns.limit_l_min ?
_reflns.observed_criterion_F_max ?
_reflns.observed_criterion_F_min ?
_reflns.pdbx_chi_squared ?
_reflns.pdbx_scaling_rejects ?
_reflns.pdbx_ordinal 1
_reflns.pdbx_diffrn_id 1
#
_reflns_shell.d_res_high 1.70
_reflns_shell.d_res_low 1.79
_reflns_shell.percent_possible_all 81
_reflns_shell.Rmerge_I_obs ?
_reflns_shell.pdbx_Rsym_value 0.56
_reflns_shell.meanI_over_sigI_obs ?
_reflns_shell.pdbx_redundancy 2.3
_reflns_shell.percent_possible_obs ?
_reflns_shell.number_unique_all 2344
_reflns_shell.number_measured_all ?
_reflns_shell.number_measured_obs ?
_reflns_shell.number_unique_obs ?
_reflns_shell.pdbx_chi_squared ?
_reflns_shell.pdbx_ordinal 1
_reflns_shell.pdbx_diffrn_id 1
#
_refine.entry_id 4DMX
_refine.ls_number_reflns_obs 18180
_refine.ls_number_reflns_all 19225
_refine.pdbx_ls_sigma_I .
_refine.pdbx_ls_sigma_F .
_refine.pdbx_data_cutoff_high_absF ?
_refine.pdbx_data_cutoff_low_absF ?
_refine.pdbx_data_cutoff_high_rms_absF ?
_refine.ls_d_res_low 83
_refine.ls_d_res_high 1.70
_refine.ls_percent_reflns_obs 96.23
_refine.ls_R_factor_obs 0.15839
_refine.ls_R_factor_all ?
_refine.ls_R_factor_R_work 0.15582
_refine.ls_R_factor_R_free 0.20574
_refine.ls_R_factor_R_free_error ?
_refine.ls_R_factor_R_free_error_details ?
_refine.ls_percent_reflns_R_free 5.1
_refine.ls_number_reflns_R_free 977
_refine.ls_number_parameters ?
_refine.ls_number_restraints ?
_refine.occupancy_min ?
_refine.occupancy_max ?
_refine.correlation_coeff_Fo_to_Fc 0.968
_refine.correlation_coeff_Fo_to_Fc_free 0.950
_refine.B_iso_mean 23.173
_refine.aniso_B[1][1] -0.03
_refine.aniso_B[2][2] -0.07
_refine.aniso_B[3][3] 0.36
_refine.aniso_B[1][2] 0.00
_refine.aniso_B[1][3] 0.39
_refine.aniso_B[2][3] 0.00
_refine.solvent_model_details 'BABINET MODEL WITH MASK'
_refine.solvent_model_param_ksol ?
_refine.solvent_model_param_bsol ?
_refine.pdbx_solvent_vdw_probe_radii 1.20
_refine.pdbx_solvent_ion_probe_radii 0.80
_refine.pdbx_solvent_shrinkage_radii 0.80
_refine.pdbx_ls_cross_valid_method THROUGHOUT
_refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS'
_refine.pdbx_starting_model ?
_refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT'
_refine.pdbx_isotropic_thermal_model ?
_refine.pdbx_stereochemistry_target_values 'Engh & Huber'
_refine.pdbx_stereochem_target_val_spec_case ?
_refine.pdbx_R_Free_selection_details RANDOM
_refine.pdbx_overall_ESU_R 0.112
_refine.pdbx_overall_ESU_R_Free 0.114
_refine.overall_SU_ML 0.084
_refine.pdbx_overall_phase_error ?
_refine.overall_SU_B 5.124
_refine.overall_SU_R_Cruickshank_DPI ?
_refine.ls_redundancy_reflns_obs ?
_refine.B_iso_min ?
_refine.B_iso_max ?
_refine.overall_SU_R_free ?
_refine.ls_wR_factor_R_free ?
_refine.ls_wR_factor_R_work ?
_refine.overall_FOM_free_R_set ?
_refine.overall_FOM_work_R_set ?
_refine.pdbx_diffrn_id 1
_refine.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine.pdbx_TLS_residual_ADP_flag ?
_refine.pdbx_overall_SU_R_free_Cruickshank_DPI ?
_refine.pdbx_overall_SU_R_Blow_DPI ?
_refine.pdbx_overall_SU_R_free_Blow_DPI ?
#
_refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine_hist.cycle_id LAST
_refine_hist.pdbx_number_atoms_protein 1649
_refine_hist.pdbx_number_atoms_nucleic_acid 0
_refine_hist.pdbx_number_atoms_ligand 35
_refine_hist.number_atoms_solvent 139
_refine_hist.number_atoms_total 1823
_refine_hist.d_res_high 1.70
_refine_hist.d_res_low 83
#
loop_
_refine_ls_restr.type
_refine_ls_restr.dev_ideal
_refine_ls_restr.dev_ideal_target
_refine_ls_restr.weight
_refine_ls_restr.number
_refine_ls_restr.pdbx_restraint_function
_refine_ls_restr.pdbx_refine_id
r_bond_refined_d 0.010 0.022 ? 1732 ? 'X-RAY DIFFRACTION'
r_bond_other_d 0.001 0.020 ? 1487 ? 'X-RAY DIFFRACTION'
r_angle_refined_deg 1.260 1.968 ? 2339 ? 'X-RAY DIFFRACTION'
r_angle_other_deg 0.719 3.000 ? 3498 ? 'X-RAY DIFFRACTION'
r_dihedral_angle_1_deg 5.215 5.000 ? 216 ? 'X-RAY DIFFRACTION'
r_dihedral_angle_2_deg 33.927 25.128 ? 78 ? 'X-RAY DIFFRACTION'
r_dihedral_angle_3_deg 13.360 15.000 ? 287 ? 'X-RAY DIFFRACTION'
r_dihedral_angle_4_deg 11.352 15.000 ? 7 ? 'X-RAY DIFFRACTION'
r_chiral_restr 0.075 0.200 ? 237 ? 'X-RAY DIFFRACTION'
r_gen_planes_refined 0.004 0.020 ? 1952 ? 'X-RAY DIFFRACTION'
r_gen_planes_other 0.001 0.020 ? 341 ? 'X-RAY DIFFRACTION'
r_nbd_refined 0.208 0.200 ? 342 ? 'X-RAY DIFFRACTION'
r_nbd_other 0.180 0.200 ? 1500 ? 'X-RAY DIFFRACTION'
r_nbtor_refined 0.181 0.200 ? 875 ? 'X-RAY DIFFRACTION'
r_nbtor_other 0.087 0.200 ? 896 ? 'X-RAY DIFFRACTION'
r_xyhbond_nbd_refined 0.119 0.200 ? 91 ? 'X-RAY DIFFRACTION'
r_xyhbond_nbd_other ? ? ? ? ? 'X-RAY DIFFRACTION'
r_metal_ion_refined ? ? ? ? ? 'X-RAY DIFFRACTION'
r_metal_ion_other ? ? ? ? ? 'X-RAY DIFFRACTION'
r_symmetry_vdw_refined 0.141 0.200 ? 8 ? 'X-RAY DIFFRACTION'
r_symmetry_vdw_other 0.145 0.200 ? 33 ? 'X-RAY DIFFRACTION'
r_symmetry_hbond_refined 0.149 0.200 ? 6 ? 'X-RAY DIFFRACTION'
r_symmetry_hbond_other ? ? ? ? ? 'X-RAY DIFFRACTION'
r_symmetry_metal_ion_refined ? ? ? ? ? 'X-RAY DIFFRACTION'
r_symmetry_metal_ion_other ? ? ? ? ? 'X-RAY DIFFRACTION'
r_mcbond_it 2.405 2.000 ? 1370 ? 'X-RAY DIFFRACTION'
r_mcbond_other 0.646 2.000 ? 449 ? 'X-RAY DIFFRACTION'
r_mcangle_it 2.758 3.000 ? 1687 ? 'X-RAY DIFFRACTION'
r_scbond_it 4.517 4.000 ? 825 ? 'X-RAY DIFFRACTION'
r_scangle_it 5.654 6.000 ? 648 ? 'X-RAY DIFFRACTION'
r_rigid_bond_restr ? ? ? ? ? 'X-RAY DIFFRACTION'
r_sphericity_free ? ? ? ? ? 'X-RAY DIFFRACTION'
r_sphericity_bonded ? ? ? ? ? 'X-RAY DIFFRACTION'
#
_refine_ls_shell.pdbx_total_number_of_bins_used 20
_refine_ls_shell.d_res_high 1.700
_refine_ls_shell.d_res_low 1.744
_refine_ls_shell.number_reflns_R_work 997
_refine_ls_shell.R_factor_R_work 0.258
_refine_ls_shell.percent_reflns_obs 72.33
_refine_ls_shell.R_factor_R_free 0.291
_refine_ls_shell.R_factor_R_free_error ?
_refine_ls_shell.percent_reflns_R_free ?
_refine_ls_shell.number_reflns_R_free 51
_refine_ls_shell.number_reflns_all ?
_refine_ls_shell.R_factor_all ?
_refine_ls_shell.number_reflns_obs ?
_refine_ls_shell.redundancy_reflns_obs ?
_refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION'
#
_database_PDB_matrix.entry_id 4DMX
_database_PDB_matrix.origx[1][1] 1.000000
_database_PDB_matrix.origx[1][2] 0.000000
_database_PDB_matrix.origx[1][3] 0.000000
_database_PDB_matrix.origx[2][1] 0.000000
_database_PDB_matrix.origx[2][2] 1.000000
_database_PDB_matrix.origx[2][3] 0.000000
_database_PDB_matrix.origx[3][1] 0.000000
_database_PDB_matrix.origx[3][2] 0.000000
_database_PDB_matrix.origx[3][3] 1.000000
_database_PDB_matrix.origx_vector[1] 0.00000
_database_PDB_matrix.origx_vector[2] 0.00000
_database_PDB_matrix.origx_vector[3] 0.00000
#
_struct.entry_id 4DMX
_struct.title 'Cathepsin K inhibitor'
_struct.pdbx_model_details ?
_struct.pdbx_CASP_flag ?
_struct.pdbx_model_type_details ?
#
_struct_keywords.entry_id 4DMX
_struct_keywords.pdbx_keywords 'Hydrolase/Hydrolase inhibitor'
_struct_keywords.text 'Cathepsin K inhibitor, osteoarthritis, Hydrolase-Hydrolase inhibitor complex'
#
loop_
_struct_asym.id
_struct_asym.pdbx_blank_PDB_chainid_flag
_struct_asym.pdbx_modified
_struct_asym.entity_id
_struct_asym.details
A N N 1 ?
B N N 2 ?
C N N 3 ?
D N N 4 ?
#
_struct_ref.id 1
_struct_ref.db_name UNP
_struct_ref.db_code CATK_HUMAN
_struct_ref.pdbx_db_accession P43235
_struct_ref.entity_id 1
_struct_ref.pdbx_seq_one_letter_code
;APDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSENDGCGGGYMTNAFQYVQKNRG
IDSEDAYPYVGQEESCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSDNL
NHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYILMARNKNNACGIANLASFPKM
;
_struct_ref.pdbx_align_begin 115
_struct_ref.pdbx_db_isoform ?
#
_struct_ref_seq.align_id 1
_struct_ref_seq.ref_id 1
_struct_ref_seq.pdbx_PDB_id_code 4DMX
_struct_ref_seq.pdbx_strand_id A
_struct_ref_seq.seq_align_beg 1
_struct_ref_seq.pdbx_seq_align_beg_ins_code ?
_struct_ref_seq.seq_align_end 215
_struct_ref_seq.pdbx_seq_align_end_ins_code ?
_struct_ref_seq.pdbx_db_accession P43235
_struct_ref_seq.db_align_beg 115
_struct_ref_seq.pdbx_db_align_beg_ins_code ?
_struct_ref_seq.db_align_end 329
_struct_ref_seq.pdbx_db_align_end_ins_code ?
_struct_ref_seq.pdbx_auth_seq_align_beg 1
_struct_ref_seq.pdbx_auth_seq_align_end 215
#
_pdbx_struct_assembly.id 1
_pdbx_struct_assembly.details author_and_software_defined_assembly
_pdbx_struct_assembly.method_details PISA
_pdbx_struct_assembly.oligomeric_details monomeric
_pdbx_struct_assembly.oligomeric_count 1
#
_pdbx_struct_assembly_gen.assembly_id 1
_pdbx_struct_assembly_gen.oper_expression 1
_pdbx_struct_assembly_gen.asym_id_list A,B,C,D
#
_pdbx_struct_oper_list.id 1
_pdbx_struct_oper_list.type 'identity operation'
_pdbx_struct_oper_list.name 1_555
_pdbx_struct_oper_list.symmetry_operation x,y,z
_pdbx_struct_oper_list.matrix[1][1] 1.0000000000
_pdbx_struct_oper_list.matrix[1][2] 0.0000000000
_pdbx_struct_oper_list.matrix[1][3] 0.0000000000
_pdbx_struct_oper_list.vector[1] 0.0000000000
_pdbx_struct_oper_list.matrix[2][1] 0.0000000000
_pdbx_struct_oper_list.matrix[2][2] 1.0000000000
_pdbx_struct_oper_list.matrix[2][3] 0.0000000000
_pdbx_struct_oper_list.vector[2] 0.0000000000
_pdbx_struct_oper_list.matrix[3][1] 0.0000000000
_pdbx_struct_oper_list.matrix[3][2] 0.0000000000
_pdbx_struct_oper_list.matrix[3][3] 1.0000000000
_pdbx_struct_oper_list.vector[3] 0.0000000000
#
_struct_biol.id 1
_struct_biol.details ?
#
loop_
_struct_conf.conf_type_id
_struct_conf.id
_struct_conf.pdbx_PDB_helix_id
_struct_conf.beg_label_comp_id
_struct_conf.beg_label_asym_id
_struct_conf.beg_label_seq_id
_struct_conf.pdbx_beg_PDB_ins_code
_struct_conf.end_label_comp_id
_struct_conf.end_label_asym_id
_struct_conf.end_label_seq_id
_struct_conf.pdbx_end_PDB_ins_code
_struct_conf.beg_auth_comp_id
_struct_conf.beg_auth_asym_id
_struct_conf.beg_auth_seq_id
_struct_conf.end_auth_comp_id
_struct_conf.end_auth_asym_id
_struct_conf.end_auth_seq_id
_struct_conf.pdbx_PDB_helix_class
_struct_conf.details
_struct_conf.pdbx_PDB_helix_length
HELX_P HELX_P1 1 ARG A 8 ? GLY A 11 ? ARG A 8 GLY A 11 5 ? 4
HELX_P HELX_P2 2 SER A 24 ? GLY A 43 ? SER A 24 GLY A 43 1 ? 20
HELX_P HELX_P3 3 SER A 49 ? VAL A 57 ? SER A 49 VAL A 57 1 ? 9
HELX_P HELX_P4 4 ASP A 61 ? GLY A 65 ? ASP A 61 GLY A 65 5 ? 5
HELX_P HELX_P5 5 TYR A 67 ? ARG A 79 ? TYR A 67 ARG A 79 1 ? 13
HELX_P HELX_P6 6 ASN A 99 ? THR A 101 ? ASN A 99 THR A 101 5 ? 3
HELX_P HELX_P7 7 ASN A 117 ? VAL A 128 ? ASN A 117 VAL A 128 1 ? 12
HELX_P HELX_P8 8 LEU A 139 ? PHE A 144 ? LEU A 139 PHE A 144 1 ? 6
HELX_P HELX_P9 9 ASN A 202 ? ILE A 206 ? ASN A 202 ILE A 206 5 ? 5
#
_struct_conf_type.id HELX_P
_struct_conf_type.criteria ?
_struct_conf_type.reference ?
#
loop_
_struct_conn.id
_struct_conn.conn_type_id
_struct_conn.pdbx_leaving_atom_flag
_struct_conn.pdbx_PDB_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.details
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
_struct_conn.pdbx_role
disulf1 disulf ? ? A CYS 22 SG ? ? ? 1_555 A CYS 63 SG ? ? A CYS 22 A CYS 63 1_555 ? ? ? ? ? ? ? 2.040 ? ?
disulf2 disulf ? ? A CYS 56 SG ? ? ? 1_555 A CYS 96 SG ? ? A CYS 56 A CYS 96 1_555 ? ? ? ? ? ? ? 2.059 ? ?
disulf3 disulf ? ? A CYS 155 SG ? ? ? 1_555 A CYS 204 SG ? ? A CYS 155 A CYS 204 1_555 ? ? ? ? ? ? ? 2.053 ? ?
covale1 covale none ? A CYS 25 SG ? ? ? 1_555 B 0LB . C28 ? ? A CYS 25 A 0LB 301 1_555 ? ? ? ? ? ? ? 1.776 ? ?
#
loop_
_struct_conn_type.id
_struct_conn_type.criteria
_struct_conn_type.reference
disulf ? ?
covale ? ?
#
loop_
_pdbx_modification_feature.ordinal
_pdbx_modification_feature.label_comp_id
_pdbx_modification_feature.label_asym_id
_pdbx_modification_feature.label_seq_id
_pdbx_modification_feature.label_alt_id
_pdbx_modification_feature.modified_residue_label_comp_id
_pdbx_modification_feature.modified_residue_label_asym_id
_pdbx_modification_feature.modified_residue_label_seq_id
_pdbx_modification_feature.modified_residue_label_alt_id
_pdbx_modification_feature.auth_comp_id
_pdbx_modification_feature.auth_asym_id
_pdbx_modification_feature.auth_seq_id
_pdbx_modification_feature.PDB_ins_code
_pdbx_modification_feature.symmetry
_pdbx_modification_feature.modified_residue_auth_comp_id
_pdbx_modification_feature.modified_residue_auth_asym_id
_pdbx_modification_feature.modified_residue_auth_seq_id
_pdbx_modification_feature.modified_residue_PDB_ins_code
_pdbx_modification_feature.modified_residue_symmetry
_pdbx_modification_feature.comp_id_linking_atom
_pdbx_modification_feature.modified_residue_id_linking_atom
_pdbx_modification_feature.modified_residue_id
_pdbx_modification_feature.ref_pcm_id
_pdbx_modification_feature.ref_comp_id
_pdbx_modification_feature.type
_pdbx_modification_feature.category
1 0LB B . ? CYS A 25 ? 0LB A 301 ? 1_555 CYS A 25 ? 1_555 C28 SG CYS 1 0LB None 'Covalent chemical modification'
2 CYS A 22 ? CYS A 63 ? CYS A 22 ? 1_555 CYS A 63 ? 1_555 SG SG . . . None 'Disulfide bridge'
3 CYS A 56 ? CYS A 96 ? CYS A 56 ? 1_555 CYS A 96 ? 1_555 SG SG . . . None 'Disulfide bridge'
4 CYS A 155 ? CYS A 204 ? CYS A 155 ? 1_555 CYS A 204 ? 1_555 SG SG . . . None 'Disulfide bridge'
#
loop_
_struct_sheet.id
_struct_sheet.type
_struct_sheet.number_strands
_struct_sheet.details
A ? 3 ?
B ? 5 ?
C ? 2 ?
D ? 2 ?
#
loop_
_struct_sheet_order.sheet_id
_struct_sheet_order.range_id_1
_struct_sheet_order.range_id_2
_struct_sheet_order.offset
_struct_sheet_order.sense
A 1 2 ? anti-parallel
A 2 3 ? anti-parallel
B 1 2 ? anti-parallel
B 2 3 ? anti-parallel
B 3 4 ? anti-parallel
B 4 5 ? parallel
C 1 2 ? anti-parallel
D 1 2 ? anti-parallel
#
loop_
_struct_sheet_range.sheet_id
_struct_sheet_range.id
_struct_sheet_range.beg_label_comp_id
_struct_sheet_range.beg_label_asym_id
_struct_sheet_range.beg_label_seq_id
_struct_sheet_range.pdbx_beg_PDB_ins_code
_struct_sheet_range.end_label_comp_id
_struct_sheet_range.end_label_asym_id
_struct_sheet_range.end_label_seq_id
_struct_sheet_range.pdbx_end_PDB_ins_code
_struct_sheet_range.beg_auth_comp_id
_struct_sheet_range.beg_auth_asym_id
_struct_sheet_range.beg_auth_seq_id
_struct_sheet_range.end_auth_comp_id
_struct_sheet_range.end_auth_asym_id
_struct_sheet_range.end_auth_seq_id
A 1 VAL A 5 ? ASP A 6 ? VAL A 5 ASP A 6
A 2 HIS A 162 ? GLN A 172 ? HIS A 162 GLN A 172
A 3 VAL A 131 ? ILE A 135 ? VAL A 131 ILE A 135
B 1 VAL A 5 ? ASP A 6 ? VAL A 5 ASP A 6
B 2 HIS A 162 ? GLN A 172 ? HIS A 162 GLN A 172
B 3 ASN A 175 ? LYS A 181 ? ASN A 175 LYS A 181
B 4 TYR A 193 ? ALA A 197 ? TYR A 193 ALA A 197
B 5 VAL A 149 ? TYR A 150 ? VAL A 149 TYR A 150
C 1 ILE A 81 ? ASP A 82 ? ILE A 81 ASP A 82
C 2 LYS A 103 ? ALA A 105 ? LYS A 103 ALA A 105
D 1 GLY A 109 ? GLU A 112 ? GLY A 109 GLU A 112
D 2 SER A 211 ? LYS A 214 ? SER A 211 LYS A 214
#
loop_
_pdbx_struct_sheet_hbond.sheet_id
_pdbx_struct_sheet_hbond.range_id_1
_pdbx_struct_sheet_hbond.range_id_2
_pdbx_struct_sheet_hbond.range_1_label_atom_id
_pdbx_struct_sheet_hbond.range_1_label_comp_id
_pdbx_struct_sheet_hbond.range_1_label_asym_id
_pdbx_struct_sheet_hbond.range_1_label_seq_id
_pdbx_struct_sheet_hbond.range_1_PDB_ins_code
_pdbx_struct_sheet_hbond.range_1_auth_atom_id
_pdbx_struct_sheet_hbond.range_1_auth_comp_id
_pdbx_struct_sheet_hbond.range_1_auth_asym_id
_pdbx_struct_sheet_hbond.range_1_auth_seq_id
_pdbx_struct_sheet_hbond.range_2_label_atom_id
_pdbx_struct_sheet_hbond.range_2_label_comp_id
_pdbx_struct_sheet_hbond.range_2_label_asym_id
_pdbx_struct_sheet_hbond.range_2_label_seq_id
_pdbx_struct_sheet_hbond.range_2_PDB_ins_code
_pdbx_struct_sheet_hbond.range_2_auth_atom_id
_pdbx_struct_sheet_hbond.range_2_auth_comp_id
_pdbx_struct_sheet_hbond.range_2_auth_asym_id
_pdbx_struct_sheet_hbond.range_2_auth_seq_id
A 1 2 N VAL A 5 ? N VAL A 5 O TYR A 169 ? O TYR A 169
A 2 3 O VAL A 164 ? O VAL A 164 N VAL A 133 ? N VAL A 133
B 1 2 N VAL A 5 ? N VAL A 5 O TYR A 169 ? O TYR A 169
B 2 3 N GLN A 172 ? N GLN A 172 O ASN A 175 ? O ASN A 175
B 3 4 N ILE A 180 ? N ILE A 180 O ILE A 194 ? O ILE A 194
B 4 5 O LEU A 195 ? O LEU A 195 N TYR A 150 ? N TYR A 150
C 1 2 N ILE A 81 ? N ILE A 81 O ALA A 104 ? O ALA A 104
D 1 2 N GLY A 109 ? N GLY A 109 O LYS A 214 ? O LYS A 214
#
loop_
_struct_site.id
_struct_site.pdbx_evidence_code
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
_struct_site.pdbx_auth_ins_code
_struct_site.pdbx_num_residues
_struct_site.details
AC1 Software A 0LB 301 ? 18 'BINDING SITE FOR RESIDUE 0LB A 301'
AC2 Software A GOL 302 ? 6 'BINDING SITE FOR RESIDUE GOL A 302'
#
loop_
_struct_site_gen.id
_struct_site_gen.site_id
_struct_site_gen.pdbx_num_res
_struct_site_gen.label_comp_id
_struct_site_gen.label_asym_id
_struct_site_gen.label_seq_id
_struct_site_gen.pdbx_auth_ins_code
_struct_site_gen.auth_comp_id
_struct_site_gen.auth_asym_id
_struct_site_gen.auth_seq_id
_struct_site_gen.label_atom_id
_struct_site_gen.label_alt_id
_struct_site_gen.symmetry
_struct_site_gen.details
1 AC1 18 THR A 14 ? THR A 14 . ? 1_455 ?
2 AC1 18 PRO A 15 ? PRO A 15 . ? 1_455 ?
3 AC1 18 GLN A 19 ? GLN A 19 . ? 1_555 ?
4 AC1 18 GLY A 23 ? GLY A 23 . ? 1_555 ?
5 AC1 18 SER A 24 ? SER A 24 . ? 1_555 ?
6 AC1 18 CYS A 25 ? CYS A 25 . ? 1_555 ?
7 AC1 18 TRP A 26 ? TRP A 26 . ? 1_555 ?
8 AC1 18 GLU A 59 ? GLU A 59 . ? 1_555 ?
9 AC1 18 ASP A 61 ? ASP A 61 . ? 1_555 ?
10 AC1 18 GLY A 64 ? GLY A 64 . ? 1_555 ?
11 AC1 18 GLY A 65 ? GLY A 65 . ? 1_555 ?
12 AC1 18 GLY A 66 ? GLY A 66 . ? 1_555 ?
13 AC1 18 TYR A 67 ? TYR A 67 . ? 1_555 ?
14 AC1 18 ALA A 134 ? ALA A 134 . ? 1_555 ?
15 AC1 18 LEU A 160 ? LEU A 160 . ? 1_555 ?
16 AC1 18 ASN A 161 ? ASN A 161 . ? 1_555 ?
17 AC1 18 LEU A 209 ? LEU A 209 . ? 1_555 ?
18 AC1 18 HOH D . ? HOH A 495 . ? 1_555 ?
19 AC2 6 LYS A 119 ? LYS A 119 . ? 1_555 ?
20 AC2 6 LYS A 122 ? LYS A 122 . ? 1_555 ?
21 AC2 6 LYS A 176 ? LYS A 176 . ? 1_555 ?
22 AC2 6 ARG A 198 ? ARG A 198 . ? 1_555 ?
23 AC2 6 ASN A 199 ? ASN A 199 . ? 1_555 ?
24 AC2 6 HOH D . ? HOH A 432 . ? 1_555 ?
#
_pdbx_entry_details.entry_id 4DMX
_pdbx_entry_details.nonpolymer_details
;THE LIGAND 0LB IS COVALENTLY BOUND TO THE SIDE CHAIN OF CYS 25. THE STARTING LIGAND GENERATING THE FINAL PRODUCT 0LB HAD A TRIPLE BOND BETWEEN C29 AND N30 ATOM GROUPS.
;
_pdbx_entry_details.sequence_details ?
_pdbx_entry_details.compound_details ?
_pdbx_entry_details.source_details ?
_pdbx_entry_details.has_ligand_of_interest ?
_pdbx_entry_details.has_protein_modification Y
#
loop_
_pdbx_validate_torsion.id
_pdbx_validate_torsion.PDB_model_num
_pdbx_validate_torsion.auth_comp_id
_pdbx_validate_torsion.auth_asym_id
_pdbx_validate_torsion.auth_seq_id
_pdbx_validate_torsion.PDB_ins_code
_pdbx_validate_torsion.label_alt_id
_pdbx_validate_torsion.phi
_pdbx_validate_torsion.psi
1 1 LYS A 200 ? ? -109.22 64.05
2 1 LYS A 200 ? ? -108.40 62.61
#
loop_
_pdbx_refine_tls.pdbx_refine_id
_pdbx_refine_tls.id
_pdbx_refine_tls.details
_pdbx_refine_tls.method
_pdbx_refine_tls.origin_x
_pdbx_refine_tls.origin_y
_pdbx_refine_tls.origin_z
_pdbx_refine_tls.T[1][1]
_pdbx_refine_tls.T[2][2]
_pdbx_refine_tls.T[3][3]
_pdbx_refine_tls.T[1][2]
_pdbx_refine_tls.T[1][3]
_pdbx_refine_tls.T[2][3]
_pdbx_refine_tls.L[1][1]
_pdbx_refine_tls.L[2][2]
_pdbx_refine_tls.L[3][3]
_pdbx_refine_tls.L[1][2]
_pdbx_refine_tls.L[1][3]
_pdbx_refine_tls.L[2][3]
_pdbx_refine_tls.S[1][1]
_pdbx_refine_tls.S[1][2]
_pdbx_refine_tls.S[1][3]
_pdbx_refine_tls.S[2][1]
_pdbx_refine_tls.S[2][2]
_pdbx_refine_tls.S[2][3]
_pdbx_refine_tls.S[3][1]
_pdbx_refine_tls.S[3][2]
_pdbx_refine_tls.S[3][3]
'X-RAY DIFFRACTION' 1 ? refined 2.121 9.353 1.192 -0.1386 -0.1323 -0.1103 0.0069 -0.0181 0.0004 2.0617 4.4396 2.4216 0.2500
-0.5446 -1.4107 0.0811 0.0016 0.1331 -0.0124 -0.0107 0.0612 -0.1434 -0.0134 -0.0703
'X-RAY DIFFRACTION' 2 ? refined 8.369 -7.667 10.331 -0.1342 -0.1084 -0.1379 0.0219 -0.0081 0.0119 1.6907 2.4208 2.9958 0.0760
-0.4507 -0.3003 -0.0125 -0.1548 -0.1339 0.0614 -0.0617 -0.0804 0.2154 0.1773 0.0742
#
loop_
_pdbx_refine_tls_group.pdbx_refine_id
_pdbx_refine_tls_group.id
_pdbx_refine_tls_group.refine_tls_id
_pdbx_refine_tls_group.beg_auth_asym_id
_pdbx_refine_tls_group.beg_auth_seq_id
_pdbx_refine_tls_group.beg_label_asym_id
_pdbx_refine_tls_group.beg_label_seq_id
_pdbx_refine_tls_group.end_auth_asym_id
_pdbx_refine_tls_group.end_auth_seq_id
_pdbx_refine_tls_group.end_label_asym_id
_pdbx_refine_tls_group.end_label_seq_id
_pdbx_refine_tls_group.selection
_pdbx_refine_tls_group.selection_details
'X-RAY DIFFRACTION' 1 1 A 20 ? ? A 111 ? ? ? ?
'X-RAY DIFFRACTION' 2 1 A 211 ? ? A 215 ? ? ? ?
'X-RAY DIFFRACTION' 3 2 A 1 ? ? A 19 ? ? ? ?
'X-RAY DIFFRACTION' 4 2 A 112 ? ? A 210 ? ? ? ?
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_ordinal
0LB N29 N N N 1
0LB C28 C N N 2
0LB C25 C N N 3
0LB C27 C N N 4
0LB C26 C N N 5
0LB N24 N N N 6
0LB C22 C N N 7
0LB O23 O N N 8
0LB C18 C N R 9
0LB C16 C N N 10
0LB C20 C N R 11
0LB C21 C N N 12
0LB C19 C N N 13
0LB C17 C N N 14
0LB C14 C N N 15
0LB O15 O N N 16
0LB N8 N N N 17
0LB C10 C N N 18
0LB C12 C N N 19
0LB N11 N N N 20
0LB C9 C N N 21
0LB C7 C N N 22
0LB C2 C Y N 23
0LB C4 C Y N 24
0LB C6 C Y N 25
0LB C5 C Y N 26
0LB F13 F N N 27
0LB C3 C Y N 28
0LB C1 C Y N 29
0LB H3 H N N 30
0LB H4 H N N 31
0LB H5 H N N 32
0LB H6 H N N 33
0LB H7 H N N 34
0LB H8 H N N 35
0LB H9 H N N 36
0LB H10 H N N 37
0LB H11 H N N 38
0LB H12 H N N 39
0LB H13 H N N 40
0LB H14 H N N 41
0LB H15 H N N 42
0LB H16 H N N 43
0LB H17 H N N 44
0LB H18 H N N 45
0LB H19 H N N 46
0LB H20 H N N 47
0LB H21 H N N 48
0LB H22 H N N 49
0LB H23 H N N 50
0LB H24 H N N 51
0LB H25 H N N 52
0LB H26 H N N 53
0LB H27 H N N 54
0LB H28 H N N 55
0LB H29 H N N 56
ALA N N N N 57
ALA CA C N S 58
ALA C C N N 59
ALA O O N N 60
ALA CB C N N 61
ALA OXT O N N 62
ALA H H N N 63
ALA H2 H N N 64
ALA HA H N N 65
ALA HB1 H N N 66
ALA HB2 H N N 67
ALA HB3 H N N 68
ALA HXT H N N 69
ARG N N N N 70
ARG CA C N S 71
ARG C C N N 72
ARG O O N N 73
ARG CB C N N 74
ARG CG C N N 75
ARG CD C N N 76
ARG NE N N N 77
ARG CZ C N N 78
ARG NH1 N N N 79
ARG NH2 N N N 80
ARG OXT O N N 81
ARG H H N N 82
ARG H2 H N N 83
ARG HA H N N 84
ARG HB2 H N N 85
ARG HB3 H N N 86
ARG HG2 H N N 87
ARG HG3 H N N 88
ARG HD2 H N N 89
ARG HD3 H N N 90
ARG HE H N N 91
ARG HH11 H N N 92
ARG HH12 H N N 93
ARG HH21 H N N 94
ARG HH22 H N N 95
ARG HXT H N N 96
ASN N N N N 97
ASN CA C N S 98
ASN C C N N 99
ASN O O N N 100
ASN CB C N N 101
ASN CG C N N 102
ASN OD1 O N N 103
ASN ND2 N N N 104
ASN OXT O N N 105
ASN H H N N 106
ASN H2 H N N 107
ASN HA H N N 108
ASN HB2 H N N 109
ASN HB3 H N N 110
ASN HD21 H N N 111
ASN HD22 H N N 112
ASN HXT H N N 113
ASP N N N N 114
ASP CA C N S 115
ASP C C N N 116
ASP O O N N 117
ASP CB C N N 118
ASP CG C N N 119
ASP OD1 O N N 120
ASP OD2 O N N 121
ASP OXT O N N 122
ASP H H N N 123
ASP H2 H N N 124
ASP HA H N N 125
ASP HB2 H N N 126
ASP HB3 H N N 127
ASP HD2 H N N 128
ASP HXT H N N 129
CYS N N N N 130
CYS CA C N R 131
CYS C C N N 132
CYS O O N N 133
CYS CB C N N 134
CYS SG S N N 135
CYS OXT O N N 136
CYS H H N N 137
CYS H2 H N N 138
CYS HA H N N 139
CYS HB2 H N N 140
CYS HB3 H N N 141
CYS HG H N N 142
CYS HXT H N N 143
GLN N N N N 144
GLN CA C N S 145
GLN C C N N 146
GLN O O N N 147
GLN CB C N N 148
GLN CG C N N 149
GLN CD C N N 150
GLN OE1 O N N 151
GLN NE2 N N N 152
GLN OXT O N N 153
GLN H H N N 154
GLN H2 H N N 155
GLN HA H N N 156
GLN HB2 H N N 157
GLN HB3 H N N 158
GLN HG2 H N N 159
GLN HG3 H N N 160
GLN HE21 H N N 161
GLN HE22 H N N 162
GLN HXT H N N 163
GLU N N N N 164
GLU CA C N S 165
GLU C C N N 166
GLU O O N N 167
GLU CB C N N 168
GLU CG C N N 169
GLU CD C N N 170
GLU OE1 O N N 171
GLU OE2 O N N 172
GLU OXT O N N 173
GLU H H N N 174
GLU H2 H N N 175
GLU HA H N N 176
GLU HB2 H N N 177
GLU HB3 H N N 178
GLU HG2 H N N 179
GLU HG3 H N N 180
GLU HE2 H N N 181
GLU HXT H N N 182
GLY N N N N 183
GLY CA C N N 184
GLY C C N N 185
GLY O O N N 186
GLY OXT O N N 187
GLY H H N N 188
GLY H2 H N N 189
GLY HA2 H N N 190
GLY HA3 H N N 191
GLY HXT H N N 192
GOL C1 C N N 193
GOL O1 O N N 194
GOL C2 C N N 195
GOL O2 O N N 196
GOL C3 C N N 197
GOL O3 O N N 198
GOL H11 H N N 199
GOL H12 H N N 200
GOL HO1 H N N 201
GOL H2 H N N 202
GOL HO2 H N N 203
GOL H31 H N N 204
GOL H32 H N N 205
GOL HO3 H N N 206
HIS N N N N 207
HIS CA C N S 208
HIS C C N N 209
HIS O O N N 210
HIS CB C N N 211
HIS CG C Y N 212
HIS ND1 N Y N 213
HIS CD2 C Y N 214
HIS CE1 C Y N 215
HIS NE2 N Y N 216
HIS OXT O N N 217
HIS H H N N 218
HIS H2 H N N 219
HIS HA H N N 220
HIS HB2 H N N 221
HIS HB3 H N N 222
HIS HD1 H N N 223
HIS HD2 H N N 224
HIS HE1 H N N 225
HIS HE2 H N N 226
HIS HXT H N N 227
HOH O O N N 228
HOH H1 H N N 229
HOH H2 H N N 230
ILE N N N N 231
ILE CA C N S 232
ILE C C N N 233
ILE O O N N 234
ILE CB C N S 235
ILE CG1 C N N 236
ILE CG2 C N N 237
ILE CD1 C N N 238
ILE OXT O N N 239
ILE H H N N 240
ILE H2 H N N 241
ILE HA H N N 242
ILE HB H N N 243
ILE HG12 H N N 244
ILE HG13 H N N 245
ILE HG21 H N N 246
ILE HG22 H N N 247
ILE HG23 H N N 248
ILE HD11 H N N 249
ILE HD12 H N N 250
ILE HD13 H N N 251
ILE HXT H N N 252
LEU N N N N 253
LEU CA C N S 254
LEU C C N N 255
LEU O O N N 256
LEU CB C N N 257
LEU CG C N N 258
LEU CD1 C N N 259
LEU CD2 C N N 260
LEU OXT O N N 261
LEU H H N N 262
LEU H2 H N N 263
LEU HA H N N 264
LEU HB2 H N N 265
LEU HB3 H N N 266
LEU HG H N N 267
LEU HD11 H N N 268
LEU HD12 H N N 269
LEU HD13 H N N 270
LEU HD21 H N N 271
LEU HD22 H N N 272
LEU HD23 H N N 273
LEU HXT H N N 274
LYS N N N N 275
LYS CA C N S 276
LYS C C N N 277
LYS O O N N 278
LYS CB C N N 279
LYS CG C N N 280
LYS CD C N N 281
LYS CE C N N 282
LYS NZ N N N 283
LYS OXT O N N 284
LYS H H N N 285
LYS H2 H N N 286
LYS HA H N N 287
LYS HB2 H N N 288
LYS HB3 H N N 289
LYS HG2 H N N 290
LYS HG3 H N N 291
LYS HD2 H N N 292
LYS HD3 H N N 293
LYS HE2 H N N 294
LYS HE3 H N N 295
LYS HZ1 H N N 296
LYS HZ2 H N N 297
LYS HZ3 H N N 298
LYS HXT H N N 299
MET N N N N 300
MET CA C N S 301
MET C C N N 302
MET O O N N 303
MET CB C N N 304
MET CG C N N 305
MET SD S N N 306
MET CE C N N 307
MET OXT O N N 308
MET H H N N 309
MET H2 H N N 310
MET HA H N N 311
MET HB2 H N N 312
MET HB3 H N N 313
MET HG2 H N N 314
MET HG3 H N N 315
MET HE1 H N N 316
MET HE2 H N N 317
MET HE3 H N N 318
MET HXT H N N 319
PHE N N N N 320
PHE CA C N S 321
PHE C C N N 322
PHE O O N N 323
PHE CB C N N 324
PHE CG C Y N 325
PHE CD1 C Y N 326
PHE CD2 C Y N 327
PHE CE1 C Y N 328
PHE CE2 C Y N 329
PHE CZ C Y N 330
PHE OXT O N N 331
PHE H H N N 332
PHE H2 H N N 333
PHE HA H N N 334
PHE HB2 H N N 335
PHE HB3 H N N 336
PHE HD1 H N N 337
PHE HD2 H N N 338
PHE HE1 H N N 339
PHE HE2 H N N 340
PHE HZ H N N 341
PHE HXT H N N 342
PRO N N N N 343
PRO CA C N S 344
PRO C C N N 345
PRO O O N N 346
PRO CB C N N 347
PRO CG C N N 348
PRO CD C N N 349
PRO OXT O N N 350
PRO H H N N 351
PRO HA H N N 352
PRO HB2 H N N 353
PRO HB3 H N N 354
PRO HG2 H N N 355
PRO HG3 H N N 356
PRO HD2 H N N 357
PRO HD3 H N N 358
PRO HXT H N N 359
SER N N N N 360
SER CA C N S 361
SER C C N N 362
SER O O N N 363
SER CB C N N 364
SER OG O N N 365
SER OXT O N N 366
SER H H N N 367
SER H2 H N N 368
SER HA H N N 369
SER HB2 H N N 370
SER HB3 H N N 371
SER HG H N N 372
SER HXT H N N 373
THR N N N N 374
THR CA C N S 375
THR C C N N 376
THR O O N N 377
THR CB C N R 378
THR OG1 O N N 379
THR CG2 C N N 380
THR OXT O N N 381
THR H H N N 382
THR H2 H N N 383
THR HA H N N 384
THR HB H N N 385
THR HG1 H N N 386
THR HG21 H N N 387
THR HG22 H N N 388
THR HG23 H N N 389
THR HXT H N N 390
TRP N N N N 391
TRP CA C N S 392
TRP C C N N 393
TRP O O N N 394
TRP CB C N N 395
TRP CG C Y N 396
TRP CD1 C Y N 397
TRP CD2 C Y N 398
TRP NE1 N Y N 399
TRP CE2 C Y N 400
TRP CE3 C Y N 401
TRP CZ2 C Y N 402
TRP CZ3 C Y N 403
TRP CH2 C Y N 404
TRP OXT O N N 405
TRP H H N N 406
TRP H2 H N N 407
TRP HA H N N 408
TRP HB2 H N N 409
TRP HB3 H N N 410
TRP HD1 H N N 411
TRP HE1 H N N 412
TRP HE3 H N N 413
TRP HZ2 H N N 414
TRP HZ3 H N N 415
TRP HH2 H N N 416
TRP HXT H N N 417
TYR N N N N 418
TYR CA C N S 419
TYR C C N N 420
TYR O O N N 421
TYR CB C N N 422
TYR CG C Y N 423
TYR CD1 C Y N 424
TYR CD2 C Y N 425
TYR CE1 C Y N 426
TYR CE2 C Y N 427
TYR CZ C Y N 428
TYR OH O N N 429
TYR OXT O N N 430
TYR H H N N 431
TYR H2 H N N 432
TYR HA H N N 433
TYR HB2 H N N 434
TYR HB3 H N N 435
TYR HD1 H N N 436
TYR HD2 H N N 437
TYR HE1 H N N 438
TYR HE2 H N N 439
TYR HH H N N 440
TYR HXT H N N 441
VAL N N N N 442
VAL CA C N S 443
VAL C C N N 444
VAL O O N N 445
VAL CB C N N 446
VAL CG1 C N N 447
VAL CG2 C N N 448
VAL OXT O N N 449
VAL H H N N 450
VAL H2 H N N 451
VAL HA H N N 452
VAL HB H N N 453
VAL HG11 H N N 454
VAL HG12 H N N 455
VAL HG13 H N N 456
VAL HG21 H N N 457
VAL HG22 H N N 458
VAL HG23 H N N 459
VAL HXT H N N 460
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
0LB C3 C1 doub Y N 1
0LB C3 C5 sing Y N 2
0LB F13 C5 sing N N 3
0LB C1 C2 sing Y N 4
0LB C5 C6 doub Y N 5
0LB C12 C10 sing N N 6
0LB C12 N11 sing N N 7
0LB C19 C17 sing N N 8
0LB C19 C21 sing N N 9
0LB C2 N11 sing N N 10
0LB C2 C4 doub Y N 11
0LB C6 C4 sing Y N 12
0LB C10 N8 sing N N 13
0LB C17 C16 sing N N 14
0LB N11 C9 sing N N 15
0LB C21 C20 sing N N 16
0LB C16 C18 sing N N 17
0LB C20 C18 sing N N 18
0LB C20 C14 sing N N 19
0LB N8 C14 sing N N 20
0LB N8 C7 sing N N 21
0LB O23 C22 doub N N 22
0LB C18 C22 sing N N 23
0LB C9 C7 sing N N 24
0LB C14 O15 doub N N 25
0LB C22 N24 sing N N 26
0LB N24 C25 sing N N 27
0LB C28 C25 sing N N 28
0LB C28 N29 trip N N 29
0LB C25 C27 sing N N 30
0LB C25 C26 sing N N 31
0LB C27 C26 sing N N 32
0LB C27 H3 sing N N 33
0LB C27 H4 sing N N 34
0LB C26 H5 sing N N 35
0LB C26 H6 sing N N 36
0LB N24 H7 sing N N 37
0LB C18 H8 sing N N 38
0LB C16 H9 sing N N 39
0LB C16 H10 sing N N 40
0LB C20 H11 sing N N 41
0LB C21 H12 sing N N 42
0LB C21 H13 sing N N 43
0LB C19 H14 sing N N 44
0LB C19 H15 sing N N 45
0LB C17 H16 sing N N 46
0LB C17 H17 sing N N 47
0LB C10 H18 sing N N 48
0LB C10 H19 sing N N 49
0LB C12 H20 sing N N 50
0LB C12 H21 sing N N 51
0LB C9 H22 sing N N 52
0LB C9 H23 sing N N 53
0LB C7 H24 sing N N 54
0LB C7 H25 sing N N 55
0LB C4 H26 sing N N 56
0LB C6 H27 sing N N 57
0LB C3 H28 sing N N 58
0LB C1 H29 sing N N 59
ALA N CA sing N N 60
ALA N H sing N N 61
ALA N H2 sing N N 62
ALA CA C sing N N 63
ALA CA CB sing N N 64
ALA CA HA sing N N 65
ALA C O doub N N 66
ALA C OXT sing N N 67
ALA CB HB1 sing N N 68
ALA CB HB2 sing N N 69
ALA CB HB3 sing N N 70
ALA OXT HXT sing N N 71
ARG N CA sing N N 72
ARG N H sing N N 73
ARG N H2 sing N N 74
ARG CA C sing N N 75
ARG CA CB sing N N 76
ARG CA HA sing N N 77
ARG C O doub N N 78
ARG C OXT sing N N 79
ARG CB CG sing N N 80
ARG CB HB2 sing N N 81
ARG CB HB3 sing N N 82
ARG CG CD sing N N 83
ARG CG HG2 sing N N 84
ARG CG HG3 sing N N 85
ARG CD NE sing N N 86
ARG CD HD2 sing N N 87
ARG CD HD3 sing N N 88
ARG NE CZ sing N N 89
ARG NE HE sing N N 90
ARG CZ NH1 sing N N 91
ARG CZ NH2 doub N N 92
ARG NH1 HH11 sing N N 93
ARG NH1 HH12 sing N N 94
ARG NH2 HH21 sing N N 95
ARG NH2 HH22 sing N N 96
ARG OXT HXT sing N N 97
ASN N CA sing N N 98
ASN N H sing N N 99
ASN N H2 sing N N 100
ASN CA C sing N N 101
ASN CA CB sing N N 102
ASN CA HA sing N N 103
ASN C O doub N N 104
ASN C OXT sing N N 105
ASN CB CG sing N N 106
ASN CB HB2 sing N N 107
ASN CB HB3 sing N N 108
ASN CG OD1 doub N N 109
ASN CG ND2 sing N N 110
ASN ND2 HD21 sing N N 111
ASN ND2 HD22 sing N N 112
ASN OXT HXT sing N N 113
ASP N CA sing N N 114
ASP N H sing N N 115
ASP N H2 sing N N 116
ASP CA C sing N N 117
ASP CA CB sing N N 118
ASP CA HA sing N N 119
ASP C O doub N N 120
ASP C OXT sing N N 121
ASP CB CG sing N N 122
ASP CB HB2 sing N N 123
ASP CB HB3 sing N N 124
ASP CG OD1 doub N N 125
ASP CG OD2 sing N N 126
ASP OD2 HD2 sing N N 127
ASP OXT HXT sing N N 128
CYS N CA sing N N 129
CYS N H sing N N 130
CYS N H2 sing N N 131
CYS CA C sing N N 132
CYS CA CB sing N N 133
CYS CA HA sing N N 134
CYS C O doub N N 135
CYS C OXT sing N N 136
CYS CB SG sing N N 137
CYS CB HB2 sing N N 138
CYS CB HB3 sing N N 139
CYS SG HG sing N N 140
CYS OXT HXT sing N N 141
GLN N CA sing N N 142
GLN N H sing N N 143
GLN N H2 sing N N 144
GLN CA C sing N N 145
GLN CA CB sing N N 146
GLN CA HA sing N N 147
GLN C O doub N N 148
GLN C OXT sing N N 149
GLN CB CG sing N N 150
GLN CB HB2 sing N N 151
GLN CB HB3 sing N N 152
GLN CG CD sing N N 153
GLN CG HG2 sing N N 154
GLN CG HG3 sing N N 155
GLN CD OE1 doub N N 156
GLN CD NE2 sing N N 157
GLN NE2 HE21 sing N N 158
GLN NE2 HE22 sing N N 159
GLN OXT HXT sing N N 160
GLU N CA sing N N 161
GLU N H sing N N 162
GLU N H2 sing N N 163
GLU CA C sing N N 164
GLU CA CB sing N N 165
GLU CA HA sing N N 166
GLU C O doub N N 167
GLU C OXT sing N N 168
GLU CB CG sing N N 169
GLU CB HB2 sing N N 170
GLU CB HB3 sing N N 171
GLU CG CD sing N N 172
GLU CG HG2 sing N N 173
GLU CG HG3 sing N N 174
GLU CD OE1 doub N N 175
GLU CD OE2 sing N N 176
GLU OE2 HE2 sing N N 177
GLU OXT HXT sing N N 178
GLY N CA sing N N 179
GLY N H sing N N 180
GLY N H2 sing N N 181
GLY CA C sing N N 182
GLY CA HA2 sing N N 183
GLY CA HA3 sing N N 184
GLY C O doub N N 185
GLY C OXT sing N N 186
GLY OXT HXT sing N N 187
GOL C1 O1 sing N N 188
GOL C1 C2 sing N N 189
GOL C1 H11 sing N N 190
GOL C1 H12 sing N N 191
GOL O1 HO1 sing N N 192
GOL C2 O2 sing N N 193
GOL C2 C3 sing N N 194
GOL C2 H2 sing N N 195
GOL O2 HO2 sing N N 196
GOL C3 O3 sing N N 197
GOL C3 H31 sing N N 198
GOL C3 H32 sing N N 199
GOL O3 HO3 sing N N 200
HIS N CA sing N N 201
HIS N H sing N N 202
HIS N H2 sing N N 203
HIS CA C sing N N 204
HIS CA CB sing N N 205
HIS CA HA sing N N 206
HIS C O doub N N 207
HIS C OXT sing N N 208
HIS CB CG sing N N 209
HIS CB HB2 sing N N 210
HIS CB HB3 sing N N 211
HIS CG ND1 sing Y N 212
HIS CG CD2 doub Y N 213
HIS ND1 CE1 doub Y N 214
HIS ND1 HD1 sing N N 215
HIS CD2 NE2 sing Y N 216
HIS CD2 HD2 sing N N 217
HIS CE1 NE2 sing Y N 218
HIS CE1 HE1 sing N N 219
HIS NE2 HE2 sing N N 220
HIS OXT HXT sing N N 221
HOH O H1 sing N N 222
HOH O H2 sing N N 223
ILE N CA sing N N 224
ILE N H sing N N 225
ILE N H2 sing N N 226
ILE CA C sing N N 227
ILE CA CB sing N N 228
ILE CA HA sing N N 229
ILE C O doub N N 230
ILE C OXT sing N N 231
ILE CB CG1 sing N N 232
ILE CB CG2 sing N N 233
ILE CB HB sing N N 234
ILE CG1 CD1 sing N N 235
ILE CG1 HG12 sing N N 236
ILE CG1 HG13 sing N N 237
ILE CG2 HG21 sing N N 238
ILE CG2 HG22 sing N N 239
ILE CG2 HG23 sing N N 240
ILE CD1 HD11 sing N N 241
ILE CD1 HD12 sing N N 242
ILE CD1 HD13 sing N N 243
ILE OXT HXT sing N N 244
LEU N CA sing N N 245
LEU N H sing N N 246
LEU N H2 sing N N 247
LEU CA C sing N N 248
LEU CA CB sing N N 249
LEU CA HA sing N N 250
LEU C O doub N N 251
LEU C OXT sing N N 252
LEU CB CG sing N N 253
LEU CB HB2 sing N N 254
LEU CB HB3 sing N N 255
LEU CG CD1 sing N N 256
LEU CG CD2 sing N N 257
LEU CG HG sing N N 258
LEU CD1 HD11 sing N N 259
LEU CD1 HD12 sing N N 260
LEU CD1 HD13 sing N N 261
LEU CD2 HD21 sing N N 262
LEU CD2 HD22 sing N N 263
LEU CD2 HD23 sing N N 264
LEU OXT HXT sing N N 265
LYS N CA sing N N 266
LYS N H sing N N 267
LYS N H2 sing N N 268
LYS CA C sing N N 269
LYS CA CB sing N N 270
LYS CA HA sing N N 271
LYS C O doub N N 272
LYS C OXT sing N N 273
LYS CB CG sing N N 274
LYS CB HB2 sing N N 275
LYS CB HB3 sing N N 276
LYS CG CD sing N N 277
LYS CG HG2 sing N N 278
LYS CG HG3 sing N N 279
LYS CD CE sing N N 280
LYS CD HD2 sing N N 281
LYS CD HD3 sing N N 282
LYS CE NZ sing N N 283
LYS CE HE2 sing N N 284
LYS CE HE3 sing N N 285
LYS NZ HZ1 sing N N 286
LYS NZ HZ2 sing N N 287
LYS NZ HZ3 sing N N 288
LYS OXT HXT sing N N 289
MET N CA sing N N 290
MET N H sing N N 291
MET N H2 sing N N 292
MET CA C sing N N 293
MET CA CB sing N N 294
MET CA HA sing N N 295
MET C O doub N N 296
MET C OXT sing N N 297
MET CB CG sing N N 298
MET CB HB2 sing N N 299
MET CB HB3 sing N N 300
MET CG SD sing N N 301
MET CG HG2 sing N N 302
MET CG HG3 sing N N 303
MET SD CE sing N N 304
MET CE HE1 sing N N 305
MET CE HE2 sing N N 306
MET CE HE3 sing N N 307
MET OXT HXT sing N N 308
PHE N CA sing N N 309
PHE N H sing N N 310
PHE N H2 sing N N 311
PHE CA C sing N N 312
PHE CA CB sing N N 313
PHE CA HA sing N N 314
PHE C O doub N N 315
PHE C OXT sing N N 316
PHE CB CG sing N N 317
PHE CB HB2 sing N N 318
PHE CB HB3 sing N N 319
PHE CG CD1 doub Y N 320
PHE CG CD2 sing Y N 321
PHE CD1 CE1 sing Y N 322
PHE CD1 HD1 sing N N 323
PHE CD2 CE2 doub Y N 324
PHE CD2 HD2 sing N N 325
PHE CE1 CZ doub Y N 326
PHE CE1 HE1 sing N N 327
PHE CE2 CZ sing Y N 328
PHE CE2 HE2 sing N N 329
PHE CZ HZ sing N N 330
PHE OXT HXT sing N N 331
PRO N CA sing N N 332
PRO N CD sing N N 333
PRO N H sing N N 334
PRO CA C sing N N 335
PRO CA CB sing N N 336
PRO CA HA sing N N 337
PRO C O doub N N 338
PRO C OXT sing N N 339
PRO CB CG sing N N 340
PRO CB HB2 sing N N 341
PRO CB HB3 sing N N 342
PRO CG CD sing N N 343
PRO CG HG2 sing N N 344
PRO CG HG3 sing N N 345
PRO CD HD2 sing N N 346
PRO CD HD3 sing N N 347
PRO OXT HXT sing N N 348
SER N CA sing N N 349
SER N H sing N N 350
SER N H2 sing N N 351
SER CA C sing N N 352
SER CA CB sing N N 353
SER CA HA sing N N 354
SER C O doub N N 355
SER C OXT sing N N 356
SER CB OG sing N N 357
SER CB HB2 sing N N 358
SER CB HB3 sing N N 359
SER OG HG sing N N 360
SER OXT HXT sing N N 361
THR N CA sing N N 362
THR N H sing N N 363
THR N H2 sing N N 364
THR CA C sing N N 365
THR CA CB sing N N 366
THR CA HA sing N N 367
THR C O doub N N 368
THR C OXT sing N N 369
THR CB OG1 sing N N 370
THR CB CG2 sing N N 371
THR CB HB sing N N 372
THR OG1 HG1 sing N N 373
THR CG2 HG21 sing N N 374
THR CG2 HG22 sing N N 375
THR CG2 HG23 sing N N 376
THR OXT HXT sing N N 377
TRP N CA sing N N 378
TRP N H sing N N 379
TRP N H2 sing N N 380
TRP CA C sing N N 381
TRP CA CB sing N N 382
TRP CA HA sing N N 383
TRP C O doub N N 384
TRP C OXT sing N N 385
TRP CB CG sing N N 386
TRP CB HB2 sing N N 387
TRP CB HB3 sing N N 388
TRP CG CD1 doub Y N 389
TRP CG CD2 sing Y N 390
TRP CD1 NE1 sing Y N 391
TRP CD1 HD1 sing N N 392
TRP CD2 CE2 doub Y N 393
TRP CD2 CE3 sing Y N 394
TRP NE1 CE2 sing Y N 395
TRP NE1 HE1 sing N N 396
TRP CE2 CZ2 sing Y N 397
TRP CE3 CZ3 doub Y N 398
TRP CE3 HE3 sing N N 399
TRP CZ2 CH2 doub Y N 400
TRP CZ2 HZ2 sing N N 401
TRP CZ3 CH2 sing Y N 402
TRP CZ3 HZ3 sing N N 403
TRP CH2 HH2 sing N N 404
TRP OXT HXT sing N N 405
TYR N CA sing N N 406
TYR N H sing N N 407
TYR N H2 sing N N 408
TYR CA C sing N N 409
TYR CA CB sing N N 410
TYR CA HA sing N N 411
TYR C O doub N N 412
TYR C OXT sing N N 413
TYR CB CG sing N N 414
TYR CB HB2 sing N N 415
TYR CB HB3 sing N N 416
TYR CG CD1 doub Y N 417
TYR CG CD2 sing Y N 418
TYR CD1 CE1 sing Y N 419
TYR CD1 HD1 sing N N 420
TYR CD2 CE2 doub Y N 421
TYR CD2 HD2 sing N N 422
TYR CE1 CZ doub Y N 423
TYR CE1 HE1 sing N N 424
TYR CE2 CZ sing Y N 425
TYR CE2 HE2 sing N N 426
TYR CZ OH sing N N 427
TYR OH HH sing N N 428
TYR OXT HXT sing N N 429
VAL N CA sing N N 430
VAL N H sing N N 431
VAL N H2 sing N N 432
VAL CA C sing N N 433
VAL CA CB sing N N 434
VAL CA HA sing N N 435
VAL C O doub N N 436
VAL C OXT sing N N 437
VAL CB CG1 sing N N 438
VAL CB CG2 sing N N 439
VAL CB HB sing N N 440
VAL CG1 HG11 sing N N 441
VAL CG1 HG12 sing N N 442
VAL CG1 HG13 sing N N 443
VAL CG2 HG21 sing N N 444
VAL CG2 HG22 sing N N 445
VAL CG2 HG23 sing N N 446
VAL OXT HXT sing N N 447
#
_atom_sites.entry_id 4DMX
_atom_sites.fract_transf_matrix[1][1] 0.030900
_atom_sites.fract_transf_matrix[1][2] 0.000000
_atom_sites.fract_transf_matrix[1][3] 0.011222
_atom_sites.fract_transf_matrix[2][1] 0.000000
_atom_sites.fract_transf_matrix[2][2] 0.011911
_atom_sites.fract_transf_matrix[2][3] 0.000000
_atom_sites.fract_transf_matrix[3][1] 0.000000
_atom_sites.fract_transf_matrix[3][2] 0.000000
_atom_sites.fract_transf_matrix[3][3] 0.029554
_atom_sites.fract_transf_vector[1] 0.00000
_atom_sites.fract_transf_vector[2] 0.00000
_atom_sites.fract_transf_vector[3] 0.00000
#
loop_
_atom_type.symbol
C
F
N
O
S
#
loop_