HEADER HYDROLASE/HYDROLASE INHIBITOR 08-FEB-12 4DMX
TITLE CATHEPSIN K INHIBITOR
COMPND MOL_ID: 1;
COMPND 2 MOLECULE: CATHEPSIN K;
COMPND 3 CHAIN: A;
COMPND 4 FRAGMENT: UNP RESIDUES 115-329;
COMPND 5 SYNONYM: CATHEPSIN O, CATHEPSIN O2, CATHEPSIN X;
COMPND 6 EC: 3.4.22.38;
COMPND 7 ENGINEERED: YES
SOURCE MOL_ID: 1;
SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;
SOURCE 3 ORGANISM_COMMON: HUMAN;
SOURCE 4 ORGANISM_TAXID: 9606;
SOURCE 5 GENE: CTSK, CTSO, CTSO2;
SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI;
SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562
KEYWDS CATHEPSIN K INHIBITOR, OSTEOARTHRITIS, HYDROLASE-HYDROLASE INHIBITOR
KEYWDS 2 COMPLEX
EXPDTA X-RAY DIFFRACTION
AUTHOR A.G.DOSSETTER,H.BEELEY,J.BOWYER,C.R.COOK,J.J.CRAWFORD,J.E.FINLAYSON,
AUTHOR 2 N.M.HERON,C.HEYES,A.J.HIGHTON,J.A.HUDSON,P.W.KENNY,S.MARTIN,
AUTHOR 3 P.A.MACFAUL,T.M.MCGUIRE,P.M.GUTIERREZ,A.D.MORLEY,J.J.MORRIS,
AUTHOR 4 K.M.PAGE,L.ROSENBRIER RIBEIRO,H.SAWNEY,S.STEINBACHER,S.KRAPP,
AUTHOR 5 A.JESTEL,C.SMITH,M.VICKERS
REVDAT 5 30-OCT-24 4DMX 1 REMARK LINK
REVDAT 4 24-JAN-18 4DMX 1 AUTHOR REMARK
REVDAT 3 26-NOV-14 4DMX 1 AUTHOR
REVDAT 2 02-JAN-13 4DMX 1 JRNL
REVDAT 1 11-JUL-12 4DMX 0
JRNL AUTH A.G.DOSSETTER,H.BEELEY,J.BOWYER,C.R.COOK,J.J.CRAWFORD,
JRNL AUTH 2 J.E.FINLAYSON,N.M.HERON,C.HEYES,A.J.HIGHTON,J.A.HUDSON,
JRNL AUTH 3 A.JESTEL,P.W.KENNY,S.KRAPP,S.MARTIN,P.A.MACFAUL,T.M.MCGUIRE,
JRNL AUTH 4 P.M.GUTIERREZ,A.D.MORLEY,J.J.MORRIS,K.M.PAGE,L.R.RIBEIRO,
JRNL AUTH 5 H.SAWNEY,S.STEINBACHER,C.SMITH,M.VICKERS
JRNL TITL (1R,2R)-N-(1-CYANOCYCLOPROPYL)-2-(6-METHOXY-1,3,4,
JRNL TITL 2 5-TETRAHYDROPYRIDO[4,3-B]INDOLE-2-CARBONYL)
JRNL TITL 3 CYCLOHEXANECARBOXAMIDE (AZD4996): A POTENT AND HIGHLY
JRNL TITL 4 SELECTIVE CATHEPSIN K INHIBITOR FOR THE TREATMENT OF
JRNL TITL 5 OSTEOARTHRITIS.
JRNL REF J.MED.CHEM. V. 55 6363 2012
JRNL REFN ISSN 0022-2623
JRNL PMID 22742641
JRNL DOI 10.1021/JM3007257
REMARK 2
REMARK 2 RESOLUTION. 1.70 ANGSTROMS.
REMARK 3
REMARK 3 REFINEMENT.
REMARK 3 PROGRAM : REFMAC 5.2.0005
REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER,
REMARK 3 : NICHOLLS,WINN,LONG,VAGIN
REMARK 3
REMARK 3 REFINEMENT TARGET : ENGH & HUBER
REMARK 3
REMARK 3 DATA USED IN REFINEMENT.
REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70
REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 83.00
REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL
REMARK 3 COMPLETENESS FOR RANGE (%) : 96.2
REMARK 3 NUMBER OF REFLECTIONS : 18180
REMARK 3
REMARK 3 FIT TO DATA USED IN REFINEMENT.
REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT
REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM
REMARK 3 R VALUE (WORKING + TEST SET) : 0.158
REMARK 3 R VALUE (WORKING SET) : 0.156
REMARK 3 FREE R VALUE : 0.206
REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100
REMARK 3 FREE R VALUE TEST SET COUNT : 977
REMARK 3
REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN.
REMARK 3 TOTAL NUMBER OF BINS USED : 20
REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.70
REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.74
REMARK 3 REFLECTION IN BIN (WORKING SET) : 997
REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 72.33
REMARK 3 BIN R VALUE (WORKING SET) : 0.2580
REMARK 3 BIN FREE R VALUE SET COUNT : 51
REMARK 3 BIN FREE R VALUE : 0.2910
REMARK 3
REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT.
REMARK 3 PROTEIN ATOMS : 1649
REMARK 3 NUCLEIC ACID ATOMS : 0
REMARK 3 HETEROGEN ATOMS : 35
REMARK 3 SOLVENT ATOMS : 139
REMARK 3
REMARK 3 B VALUES.
REMARK 3 FROM WILSON PLOT (A**2) : 19.88
REMARK 3 MEAN B VALUE (OVERALL, A**2) : 23.17
REMARK 3 OVERALL ANISOTROPIC B VALUE.
REMARK 3 B11 (A**2) : -0.03000
REMARK 3 B22 (A**2) : -0.07000
REMARK 3 B33 (A**2) : 0.36000
REMARK 3 B12 (A**2) : 0.00000
REMARK 3 B13 (A**2) : 0.39000
REMARK 3 B23 (A**2) : 0.00000
REMARK 3
REMARK 3 ESTIMATED OVERALL COORDINATE ERROR.
REMARK 3 ESU BASED ON R VALUE (A): 0.112
REMARK 3 ESU BASED ON FREE R VALUE (A): 0.114
REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.084
REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 5.124
REMARK 3
REMARK 3 CORRELATION COEFFICIENTS.
REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.968
REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.950
REMARK 3
REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT
REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1732 ; 0.010 ; 0.022
REMARK 3 BOND LENGTHS OTHERS (A): 1487 ; 0.001 ; 0.020
REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2339 ; 1.260 ; 1.968
REMARK 3 BOND ANGLES OTHERS (DEGREES): 3498 ; 0.719 ; 3.000
REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 216 ; 5.215 ; 5.000
REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 78 ;33.927 ;25.128
REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 287 ;13.360 ;15.000
REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 7 ;11.352 ;15.000
REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 237 ; 0.075 ; 0.200
REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1952 ; 0.004 ; 0.020
REMARK 3 GENERAL PLANES OTHERS (A): 341 ; 0.001 ; 0.020
REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 342 ; 0.208 ; 0.200
REMARK 3 NON-BONDED CONTACTS OTHERS (A): 1500 ; 0.180 ; 0.200
REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 875 ; 0.181 ; 0.200
REMARK 3 NON-BONDED TORSION OTHERS (A): 896 ; 0.087 ; 0.200
REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 91 ; 0.119 ; 0.200
REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL
REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL
REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL
REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 8 ; 0.141 ; 0.200
REMARK 3 SYMMETRY VDW OTHERS (A): 33 ; 0.145 ; 0.200
REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 6 ; 0.149 ; 0.200
REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL
REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL
REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL
REMARK 3
REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT
REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1370 ; 2.405 ; 2.000
REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 449 ; 0.646 ; 2.000
REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1687 ; 2.758 ; 3.000
REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 825 ; 4.517 ; 4.000
REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 648 ; 5.654 ; 6.000
REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3
REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT
REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL
REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3
REMARK 3 NCS RESTRAINTS STATISTICS
REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL
REMARK 3
REMARK 3 TLS DETAILS
REMARK 3 NUMBER OF TLS GROUPS : 2
REMARK 3
REMARK 3 TLS GROUP : 1
REMARK 3 NUMBER OF COMPONENTS GROUP : 2
REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI
REMARK 3 RESIDUE RANGE : A 20 A 111
REMARK 3 RESIDUE RANGE : A 211 A 215
REMARK 3 ORIGIN FOR THE GROUP (A): 2.121 9.353 1.192
REMARK 3 T TENSOR
REMARK 3 T11: -0.1386 T22: -0.1323
REMARK 3 T33: -0.1103 T12: 0.0069
REMARK 3 T13: -0.0181 T23: 0.0004
REMARK 3 L TENSOR
REMARK 3 L11: 2.0617 L22: 4.4396
REMARK 3 L33: 2.4216 L12: 0.2500
REMARK 3 L13: -0.5446 L23: -1.4107
REMARK 3 S TENSOR
REMARK 3 S11: 0.0811 S12: 0.0016 S13: 0.1331
REMARK 3 S21: -0.0124 S22: -0.0107 S23: 0.0612
REMARK 3 S31: -0.1434 S32: -0.0134 S33: -0.0703
REMARK 3
REMARK 3 TLS GROUP : 2
REMARK 3 NUMBER OF COMPONENTS GROUP : 2
REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI
REMARK 3 RESIDUE RANGE : A 1 A 19
REMARK 3 RESIDUE RANGE : A 112 A 210
REMARK 3 ORIGIN FOR THE GROUP (A): 8.369 -7.667 10.331
REMARK 3 T TENSOR
REMARK 3 T11: -0.1342 T22: -0.1084
REMARK 3 T33: -0.1379 T12: 0.0219
REMARK 3 T13: -0.0081 T23: 0.0119
REMARK 3 L TENSOR
REMARK 3 L11: 1.6907 L22: 2.4208
REMARK 3 L33: 2.9958 L12: 0.0760
REMARK 3 L13: -0.4507 L23: -0.3003
REMARK 3 S TENSOR
REMARK 3 S11: -0.0125 S12: -0.1548 S13: -0.1339
REMARK 3 S21: 0.0614 S22: -0.0617 S23: -0.0804
REMARK 3 S31: 0.2154 S32: 0.1773 S33: 0.0742
REMARK 3
REMARK 3 BULK SOLVENT MODELLING.
REMARK 3 METHOD USED : BABINET MODEL WITH MASK
REMARK 3 PARAMETERS FOR MASK CALCULATION
REMARK 3 VDW PROBE RADIUS : 1.20
REMARK 3 ION PROBE RADIUS : 0.80
REMARK 3 SHRINKAGE RADIUS : 0.80
REMARK 3
REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING
REMARK 3 POSITIONS
REMARK 4
REMARK 4 4DMX COMPLIES WITH FORMAT V. 3.30, 13-JUL-11
REMARK 100
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 12-FEB-12.
REMARK 100 THE DEPOSITION ID IS D_1000070529.
REMARK 200
REMARK 200 EXPERIMENTAL DETAILS
REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION
REMARK 200 DATE OF DATA COLLECTION : 27-JUL-06
REMARK 200 TEMPERATURE (KELVIN) : 100
REMARK 200 PH : 5.5
REMARK 200 NUMBER OF CRYSTALS USED : 1
REMARK 200
REMARK 200 SYNCHROTRON (Y/N) : Y
REMARK 200 RADIATION SOURCE : ESRF
REMARK 200 BEAMLINE : ID29
REMARK 200 X-RAY GENERATOR MODEL : NULL
REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M
REMARK 200 WAVELENGTH OR RANGE (A) : 1.0370
REMARK 200 MONOCHROMATOR : HIGH RESOLUTION SI(311) CUT AND
REMARK 200 A LOWER RESOLUTION SI(111) CUT
REMARK 200 OPTICS : LIQUID NITROGEN COOLED CHANNEL
REMARK 200 -CUT SILICON MONOCHROMATOR AND A
REMARK 200 CYLINDRICAL GRAZING INCIDENCE
REMARK 200 MIRROR
REMARK 200
REMARK 200 DETECTOR TYPE : CCD
REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315
REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM
REMARK 200 DATA SCALING SOFTWARE : SCALA
REMARK 200
REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 19225
REMARK 200 RESOLUTION RANGE HIGH (A) : 1.700
REMARK 200 RESOLUTION RANGE LOW (A) : 83.000
REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000
REMARK 200
REMARK 200 OVERALL.
REMARK 200 COMPLETENESS FOR RANGE (%) : 96.6
REMARK 200 DATA REDUNDANCY : 3.300
REMARK 200 R MERGE (I) : NULL
REMARK 200 R SYM (I) : 0.12300
REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 3.2000
REMARK 200
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.70
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.79
REMARK 200 COMPLETENESS FOR SHELL (%) : 81.0
REMARK 200 DATA REDUNDANCY IN SHELL : 2.30
REMARK 200 R MERGE FOR SHELL (I) : NULL
REMARK 200 R SYM FOR SHELL (I) : 0.56000
REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL
REMARK 200
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT
REMARK 200 SOFTWARE USED: MOLREP
REMARK 200 STARTING MODEL: NULL
REMARK 200
REMARK 200 REMARK: NULL
REMARK 280
REMARK 280 CRYSTAL
REMARK 280 SOLVENT CONTENT, VS (%): 37.06
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.95
REMARK 280
REMARK 280 CRYSTALLIZATION CONDITIONS: PEG, PH 5.5, VAPOR DIFFUSION,
REMARK 280 TEMPERATURE 293K
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1
REMARK 290
REMARK 290 SYMOP SYMMETRY
REMARK 290 NNNMMM OPERATOR
REMARK 290 1555 X,Y,Z
REMARK 290 2555 -X,Y+1/2,-Z
REMARK 290
REMARK 290 WHERE NNN -> OPERATOR NUMBER
REMARK 290 MMM -> TRANSLATION VECTOR
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY
REMARK 290 RELATED MOLECULES.
REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000
REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 41.97900
REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000
REMARK 290
REMARK 290 REMARK: NULL
REMARK 300
REMARK 300 BIOMOLECULE: 1
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON
REMARK 300 BURIED SURFACE AREA.
REMARK 350
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS
REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.
REMARK 350
REMARK 350 BIOMOLECULE: 1
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC
REMARK 350 SOFTWARE USED: PISA
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 480
REMARK 480 ZERO OCCUPANCY ATOM
REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO
REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS
REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME;
REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE):
REMARK 480 M RES C SSEQI ATOMS
REMARK 480 LYS A 147 CE NZ
REMARK 480 GLU A 186 CD OE1 OE2
REMARK 480 LYS A 214 CD CE NZ
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: TORSION ANGLES
REMARK 500
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)
REMARK 500
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400
REMARK 500
REMARK 500 M RES CSSEQI PSI PHI
REMARK 500 LYS A 200 64.05 -109.22
REMARK 500 LYS A 200 62.61 -108.40
REMARK 500
REMARK 500 REMARK: NULL
REMARK 600
REMARK 600 HETEROGEN
REMARK 600
REMARK 600 THE LIGAND 0LB IS COVALENTLY BOUND TO THE SIDE CHAIN OF CYS 25. THE
REMARK 600 STARTING LIGAND GENERATING THE FINAL PRODUCT 0LB HAD A TRIPLE BOND
REMARK 600 BETWEEN C29 AND N30 ATOM GROUPS.
REMARK 800
REMARK 800 SITE
REMARK 800 SITE_IDENTIFIER: AC1
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 0LB A 301
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC2
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 302
REMARK 900
REMARK 900 RELATED ENTRIES
REMARK 900 RELATED ID: 4DMY RELATED DB: PDB
DBREF 4DMX A 1 215 UNP P43235 CATK_HUMAN 115 329
SEQRES 1 A 215 ALA PRO ASP SER VAL ASP TYR ARG LYS LYS GLY TYR VAL
SEQRES 2 A 215 THR PRO VAL LYS ASN GLN GLY GLN CYS GLY SER CYS TRP
SEQRES 3 A 215 ALA PHE SER SER VAL GLY ALA LEU GLU GLY GLN LEU LYS
SEQRES 4 A 215 LYS LYS THR GLY LYS LEU LEU ASN LEU SER PRO GLN ASN
SEQRES 5 A 215 LEU VAL ASP CYS VAL SER GLU ASN ASP GLY CYS GLY GLY
SEQRES 6 A 215 GLY TYR MET THR ASN ALA PHE GLN TYR VAL GLN LYS ASN
SEQRES 7 A 215 ARG GLY ILE ASP SER GLU ASP ALA TYR PRO TYR VAL GLY
SEQRES 8 A 215 GLN GLU GLU SER CYS MET TYR ASN PRO THR GLY LYS ALA
SEQRES 9 A 215 ALA LYS CYS ARG GLY TYR ARG GLU ILE PRO GLU GLY ASN
SEQRES 10 A 215 GLU LYS ALA LEU LYS ARG ALA VAL ALA ARG VAL GLY PRO
SEQRES 11 A 215 VAL SER VAL ALA ILE ASP ALA SER LEU THR SER PHE GLN
SEQRES 12 A 215 PHE TYR SER LYS GLY VAL TYR TYR ASP GLU SER CYS ASN
SEQRES 13 A 215 SER ASP ASN LEU ASN HIS ALA VAL LEU ALA VAL GLY TYR
SEQRES 14 A 215 GLY ILE GLN LYS GLY ASN LYS HIS TRP ILE ILE LYS ASN
SEQRES 15 A 215 SER TRP GLY GLU ASN TRP GLY ASN LYS GLY TYR ILE LEU
SEQRES 16 A 215 MET ALA ARG ASN LYS ASN ASN ALA CYS GLY ILE ALA ASN
SEQRES 17 A 215 LEU ALA SER PHE PRO LYS MET
HET 0LB A 301 29
HET GOL A 302 6
HETNAM 0LB (1R,2R)-N-(1-CYANOCYCLOPROPYL)-2-{[4-(4-FLUOROPHENYL)
HETNAM 2 0LB PIPERAZIN-1-YL]CARBONYL}CYCLOHEXANECARBOXAMIDE
HETNAM GOL GLYCEROL
HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL
FORMUL 2 0LB C22 H27 F N4 O2
FORMUL 3 GOL C3 H8 O3
FORMUL 4 HOH *139(H2 O)
HELIX 1 1 ARG A 8 GLY A 11 5 4
HELIX 2 2 SER A 24 GLY A 43 1 20
HELIX 3 3 SER A 49 VAL A 57 1 9
HELIX 4 4 ASP A 61 GLY A 65 5 5
HELIX 5 5 TYR A 67 ARG A 79 1 13
HELIX 6 6 ASN A 99 THR A 101 5 3
HELIX 7 7 ASN A 117 VAL A 128 1 12
HELIX 8 8 LEU A 139 PHE A 144 1 6
HELIX 9 9 ASN A 202 ILE A 206 5 5
SHEET 1 A 3 VAL A 5 ASP A 6 0
SHEET 2 A 3 HIS A 162 GLN A 172 -1 O TYR A 169 N VAL A 5
SHEET 3 A 3 VAL A 131 ILE A 135 -1 N VAL A 133 O VAL A 164
SHEET 1 B 5 VAL A 5 ASP A 6 0
SHEET 2 B 5 HIS A 162 GLN A 172 -1 O TYR A 169 N VAL A 5
SHEET 3 B 5 ASN A 175 LYS A 181 -1 O ASN A 175 N GLN A 172
SHEET 4 B 5 TYR A 193 ALA A 197 -1 O ILE A 194 N ILE A 180
SHEET 5 B 5 VAL A 149 TYR A 150 1 N TYR A 150 O LEU A 195
SHEET 1 C 2 ILE A 81 ASP A 82 0
SHEET 2 C 2 LYS A 103 ALA A 105 -1 O ALA A 104 N ILE A 81
SHEET 1 D 2 GLY A 109 GLU A 112 0
SHEET 2 D 2 SER A 211 LYS A 214 -1 O LYS A 214 N GLY A 109
SSBOND 1 CYS A 22 CYS A 63 1555 1555 2.04
SSBOND 2 CYS A 56 CYS A 96 1555 1555 2.06
SSBOND 3 CYS A 155 CYS A 204 1555 1555 2.05
LINK SG CYS A 25 C28 0LB A 301 1555 1555 1.78
SITE 1 AC1 18 THR A 14 PRO A 15 GLN A 19 GLY A 23
SITE 2 AC1 18 SER A 24 CYS A 25 TRP A 26 GLU A 59
SITE 3 AC1 18 ASP A 61 GLY A 64 GLY A 65 GLY A 66
SITE 4 AC1 18 TYR A 67 ALA A 134 LEU A 160 ASN A 161
SITE 5 AC1 18 LEU A 209 HOH A 495
SITE 1 AC2 6 LYS A 119 LYS A 122 LYS A 176 ARG A 198
SITE 2 AC2 6 ASN A 199 HOH A 432
CRYST1 32.362 83.958 35.999 90.00 109.96 90.00 P 1 21 1 2
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.030900 0.000000 0.011222 0.00000
SCALE2 0.000000 0.011911 0.000000 0.00000
SCALE3 0.000000 0.000000 0.029554 0.00000