HEADER TRANSPORT PROTEIN 08-FEB-12 4DN7 TITLE CRYSTAL STRUCTURE OF PUTATIVE ABC TRANSPORTER, ATP-BINDING PROTEIN TITLE 2 FROM METHANOSARCINA MAZEI GO1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: ABC TRANSPORTER, ATP-BINDING PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: METHANOSARCINA MAZE; SOURCE 3 ORGANISM_TAXID: 192952; SOURCE 4 STRAIN: GO1; SOURCE 5 GENE: MM_1088; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)CODON+RIL; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: BC-PSGX3(BC) KEYWDS STRUCTURAL GENOMICS, PROTEIN STRUCTURE INITIATIVE, NEW YORK KEYWDS 2 STRUCTURAL GENOMIX RESEARCH CONSORTIUM, NYSGRC, PSI-BIOLOGY, NEW KEYWDS 3 YORK STRUCTURAL GENOMICS RESEARCH CONSORTIUM, TRANSPORT PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR V.N.MALASHKEVICH,R.BHOSLE,R.TORO,R.SEIDEL,S.C.ALMO,NEW YORK AUTHOR 2 STRUCTURAL GENOMICS RESEARCH CONSORTIUM (NYSGRC) REVDAT 2 20-NOV-24 4DN7 1 REMARK SEQADV LINK REVDAT 1 22-FEB-12 4DN7 0 JRNL AUTH V.N.MALASHKEVICH,R.BHOSLE,R.TORO,R.SEIDEL,S.C.ALMO JRNL TITL CRYSTAL STRUCTURE OF PUTATIVE ABC TRANSPORTER, ATP-BINDING JRNL TITL 2 PROTEIN FROM METHANOSARCINA MAZEI GO1 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.56 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 88.8 REMARK 3 NUMBER OF REFLECTIONS : 100625 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.169 REMARK 3 R VALUE (WORKING SET) : 0.166 REMARK 3 FREE R VALUE : 0.232 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 5014 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.60 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.64 REMARK 3 REFLECTION IN BIN (WORKING SET) : 7231 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 91.51 REMARK 3 BIN R VALUE (WORKING SET) : 0.2630 REMARK 3 BIN FREE R VALUE SET COUNT : 372 REMARK 3 BIN FREE R VALUE : 0.3380 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6213 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 38 REMARK 3 SOLVENT ATOMS : 511 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 29.20 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.01000 REMARK 3 B22 (A**2) : 0.12000 REMARK 3 B33 (A**2) : -0.04000 REMARK 3 B12 (A**2) : 0.05000 REMARK 3 B13 (A**2) : -0.04000 REMARK 3 B23 (A**2) : 0.09000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.125 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.105 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.073 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.799 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.972 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.947 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 6378 ; 0.008 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 8599 ; 1.319 ; 1.994 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 826 ; 5.671 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 258 ;37.468 ;25.426 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1150 ;13.824 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 30 ; 9.842 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 999 ; 0.085 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4628 ; 0.005 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 6378 ; 2.964 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): 191 ;25.116 ; 5.000 REMARK 3 SPHERICITY; BONDED ATOMS (A**2): 6610 ;14.739 ; 5.000 REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A -10 A 9999 REMARK 3 ORIGIN FOR THE GROUP (A): 30.6677 4.2665 11.5810 REMARK 3 T TENSOR REMARK 3 T11: 0.0176 T22: 0.0197 REMARK 3 T33: 0.0225 T12: -0.0109 REMARK 3 T13: 0.0070 T23: -0.0079 REMARK 3 L TENSOR REMARK 3 L11: 0.3195 L22: 0.1780 REMARK 3 L33: 0.2577 L12: -0.0450 REMARK 3 L13: -0.0433 L23: 0.0488 REMARK 3 S TENSOR REMARK 3 S11: 0.0071 S12: -0.0578 S13: -0.0183 REMARK 3 S21: 0.0483 S22: -0.0089 S23: -0.0004 REMARK 3 S31: 0.0083 S32: 0.0219 S33: 0.0018 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B -10 B 9999 REMARK 3 ORIGIN FOR THE GROUP (A): 25.2765 8.8227 -31.8379 REMARK 3 T TENSOR REMARK 3 T11: 0.0200 T22: 0.0165 REMARK 3 T33: 0.0233 T12: -0.0059 REMARK 3 T13: 0.0057 T23: -0.0136 REMARK 3 L TENSOR REMARK 3 L11: 0.2407 L22: 0.3802 REMARK 3 L33: 0.2954 L12: -0.0859 REMARK 3 L13: -0.0296 L23: -0.0385 REMARK 3 S TENSOR REMARK 3 S11: 0.0027 S12: 0.0490 S13: -0.0101 REMARK 3 S21: -0.0746 S22: -0.0107 S23: 0.0195 REMARK 3 S31: -0.0006 S32: -0.0095 S33: 0.0079 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN USED IF PRESENT IN REMARK 3 THE INPUT U VALUES : RESIDUAL ONLY REMARK 4 REMARK 4 4DN7 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 09-FEB-12. REMARK 100 THE DEPOSITION ID IS D_1000070539. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 03-FEB-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X29A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : NULL REMARK 200 WAVELENGTH OR RANGE (A) : 0.9791 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 101227 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.600 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 88.9 REMARK 200 DATA REDUNDANCY : 3.800 REMARK 200 R MERGE (I) : 0.07500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.63 REMARK 200 COMPLETENESS FOR SHELL (%) : 90.0 REMARK 200 DATA REDUNDANCY IN SHELL : 3.20 REMARK 200 R MERGE FOR SHELL (I) : 0.89500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHELX, SHELXD REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.14 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.33 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M NA ACETATE, 0.1M MES:NAOH, PH REMARK 280 6.5, 30% PEG400, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: BIOLOGICAL UNIT IS THE SAME AS ASYM. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3760 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 32160 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -18.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MSE A -21 REMARK 465 HIS A -20 REMARK 465 HIS A -19 REMARK 465 HIS A -18 REMARK 465 HIS A -17 REMARK 465 HIS A -16 REMARK 465 HIS A -15 REMARK 465 SER A -14 REMARK 465 SER A -13 REMARK 465 GLY A -12 REMARK 465 VAL A -11 REMARK 465 ASP A -10 REMARK 465 LEU A -9 REMARK 465 GLY A -8 REMARK 465 THR A -7 REMARK 465 GLU A -6 REMARK 465 ASN A -5 REMARK 465 LEU A -4 REMARK 465 TYR A -3 REMARK 465 PHE A -2 REMARK 465 GLN A -1 REMARK 465 SER A 0 REMARK 465 MSE A 1 REMARK 465 MSE B -21 REMARK 465 HIS B -20 REMARK 465 HIS B -19 REMARK 465 HIS B -18 REMARK 465 HIS B -17 REMARK 465 HIS B -16 REMARK 465 HIS B -15 REMARK 465 SER B -14 REMARK 465 SER B -13 REMARK 465 GLY B -12 REMARK 465 VAL B -11 REMARK 465 ASP B -10 REMARK 465 LEU B -9 REMARK 465 GLY B -8 REMARK 465 THR B -7 REMARK 465 GLU B -6 REMARK 465 ASN B -5 REMARK 465 LEU B -4 REMARK 465 TYR B -3 REMARK 465 PHE B -2 REMARK 465 GLN B -1 REMARK 465 SER B 0 REMARK 465 MSE B 1 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 320 NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 75 -119.00 49.47 REMARK 500 LYS A 154 80.22 -156.17 REMARK 500 TRP A 210 -132.29 -101.99 REMARK 500 TYR A 246 67.88 -150.89 REMARK 500 ASP B 75 -116.77 49.22 REMARK 500 LYS B 154 76.24 -153.67 REMARK 500 TRP B 210 -129.80 -102.02 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 1PE A 500 REMARK 610 1PE A 501 REMARK 610 1PE B 500 REMARK 610 1PE B 501 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 1PE A 500 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 1PE A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 1PE B 500 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 1PE B 501 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: NYSGRC-013885 RELATED DB: TARGETTRACK DBREF 4DN7 A 1 407 UNP Q8PXX8 Q8PXX8_METMA 1 407 DBREF 4DN7 B 1 407 UNP Q8PXX8 Q8PXX8_METMA 1 407 SEQADV 4DN7 MSE A -21 UNP Q8PXX8 EXPRESSION TAG SEQADV 4DN7 HIS A -20 UNP Q8PXX8 EXPRESSION TAG SEQADV 4DN7 HIS A -19 UNP Q8PXX8 EXPRESSION TAG SEQADV 4DN7 HIS A -18 UNP Q8PXX8 EXPRESSION TAG SEQADV 4DN7 HIS A -17 UNP Q8PXX8 EXPRESSION TAG SEQADV 4DN7 HIS A -16 UNP Q8PXX8 EXPRESSION TAG SEQADV 4DN7 HIS A -15 UNP Q8PXX8 EXPRESSION TAG SEQADV 4DN7 SER A -14 UNP Q8PXX8 EXPRESSION TAG SEQADV 4DN7 SER A -13 UNP Q8PXX8 EXPRESSION TAG SEQADV 4DN7 GLY A -12 UNP Q8PXX8 EXPRESSION TAG SEQADV 4DN7 VAL A -11 UNP Q8PXX8 EXPRESSION TAG SEQADV 4DN7 ASP A -10 UNP Q8PXX8 EXPRESSION TAG SEQADV 4DN7 LEU A -9 UNP Q8PXX8 EXPRESSION TAG SEQADV 4DN7 GLY A -8 UNP Q8PXX8 EXPRESSION TAG SEQADV 4DN7 THR A -7 UNP Q8PXX8 EXPRESSION TAG SEQADV 4DN7 GLU A -6 UNP Q8PXX8 EXPRESSION TAG SEQADV 4DN7 ASN A -5 UNP Q8PXX8 EXPRESSION TAG SEQADV 4DN7 LEU A -4 UNP Q8PXX8 EXPRESSION TAG SEQADV 4DN7 TYR A -3 UNP Q8PXX8 EXPRESSION TAG SEQADV 4DN7 PHE A -2 UNP Q8PXX8 EXPRESSION TAG SEQADV 4DN7 GLN A -1 UNP Q8PXX8 EXPRESSION TAG SEQADV 4DN7 SER A 0 UNP Q8PXX8 EXPRESSION TAG SEQADV 4DN7 MSE B -21 UNP Q8PXX8 EXPRESSION TAG SEQADV 4DN7 HIS B -20 UNP Q8PXX8 EXPRESSION TAG SEQADV 4DN7 HIS B -19 UNP Q8PXX8 EXPRESSION TAG SEQADV 4DN7 HIS B -18 UNP Q8PXX8 EXPRESSION TAG SEQADV 4DN7 HIS B -17 UNP Q8PXX8 EXPRESSION TAG SEQADV 4DN7 HIS B -16 UNP Q8PXX8 EXPRESSION TAG SEQADV 4DN7 HIS B -15 UNP Q8PXX8 EXPRESSION TAG SEQADV 4DN7 SER B -14 UNP Q8PXX8 EXPRESSION TAG SEQADV 4DN7 SER B -13 UNP Q8PXX8 EXPRESSION TAG SEQADV 4DN7 GLY B -12 UNP Q8PXX8 EXPRESSION TAG SEQADV 4DN7 VAL B -11 UNP Q8PXX8 EXPRESSION TAG SEQADV 4DN7 ASP B -10 UNP Q8PXX8 EXPRESSION TAG SEQADV 4DN7 LEU B -9 UNP Q8PXX8 EXPRESSION TAG SEQADV 4DN7 GLY B -8 UNP Q8PXX8 EXPRESSION TAG SEQADV 4DN7 THR B -7 UNP Q8PXX8 EXPRESSION TAG SEQADV 4DN7 GLU B -6 UNP Q8PXX8 EXPRESSION TAG SEQADV 4DN7 ASN B -5 UNP Q8PXX8 EXPRESSION TAG SEQADV 4DN7 LEU B -4 UNP Q8PXX8 EXPRESSION TAG SEQADV 4DN7 TYR B -3 UNP Q8PXX8 EXPRESSION TAG SEQADV 4DN7 PHE B -2 UNP Q8PXX8 EXPRESSION TAG SEQADV 4DN7 GLN B -1 UNP Q8PXX8 EXPRESSION TAG SEQADV 4DN7 SER B 0 UNP Q8PXX8 EXPRESSION TAG SEQRES 1 A 429 MSE HIS HIS HIS HIS HIS HIS SER SER GLY VAL ASP LEU SEQRES 2 A 429 GLY THR GLU ASN LEU TYR PHE GLN SER MSE GLN THR GLU SEQRES 3 A 429 GLN VAL SER LEU LYS LYS ARG ALA GLU SER ALA ALA GLU SEQRES 4 A 429 LYS LYS ALA ALA PHE GLY GLU ASP PHE GLU LEU GLU LYS SEQRES 5 A 429 TYR GLU GLU GLY SER LYS VAL SER LYS PRO ILE GLU ASP SEQRES 6 A 429 LEU GLN SER LEU ASP GLU GLU SER LYS LYS THR LEU LEU SEQRES 7 A 429 GLN VAL GLY VAL ILE PRO SER GLU GLU GLY ARG SER GLY SEQRES 8 A 429 SER PHE LEU VAL LEU ASP ASN ALA VAL SER HIS SER THR SEQRES 9 A 429 LEU LYS ASP LYS ASN VAL GLU LEU MSE SER THR HIS LYS SEQRES 10 A 429 ALA MSE GLU LYS TYR GLU TRP LEU LYS ASP TYR SER TRP SEQRES 11 A 429 LYS LEU VAL GLN VAL ASP ALA ASP LYS TYR THR ALA LYS SEQRES 12 A 429 THR TYR LEU GLU ASP ALA ASP GLY TYR PHE ILE ARG VAL SEQRES 13 A 429 PRO ALA GLY LYS LYS THR SER MSE PRO VAL GLN THR CYS SEQRES 14 A 429 LEU MSE LEU GLY SER LYS LYS ALA ALA GLN THR VAL HIS SEQRES 15 A 429 ASN ILE ILE ILE VAL GLU GLU GLY ALA THR LEU ASP ILE SEQRES 16 A 429 ILE THR GLY CYS THR THR LYS LYS GLY VAL GLU GLU GLY SEQRES 17 A 429 LEU HIS LEU GLY ILE SER GLU MSE TYR ILE LYS LYS GLY SEQRES 18 A 429 GLY THR LEU ASN PHE THR MSE ILE HIS ASN TRP ALA GLU SEQRES 19 A 429 GLN ILE GLY VAL ARG PRO ARG THR VAL VAL SER VAL GLU SEQRES 20 A 429 GLU GLY GLY THR TYR VAL SER ASN TYR ILE CYS LEU LYS SEQRES 21 A 429 PRO VAL ARG SER VAL GLN THR TYR PRO THR VAL ARG LEU SEQRES 22 A 429 GLU GLY GLU GLY ALA VAL THR ARG LEU ASN THR ILE ALA SEQRES 23 A 429 ILE ALA HIS PRO GLY SER GLU LEU ASP LEU GLY SER LYS SEQRES 24 A 429 ALA ILE PHE ASN ALA PRO GLY THR ARG ALA GLU LEU ILE SEQRES 25 A 429 SER ARG THR ILE THR ILE GLY GLY ARG LEU ILE ALA ARG SEQRES 26 A 429 GLY GLU MSE ILE GLY ASN ALA LYS GLY ALA LYS GLY HIS SEQRES 27 A 429 LEU GLU CYS LYS GLY LEU VAL LEU THR ASP LYS GLY SER SEQRES 28 A 429 GLN LEU ALA ILE PRO ILE LEU GLU ALA ASN VAL ASP ASP SEQRES 29 A 429 ILE GLU LEU THR HIS GLU ALA ALA VAL GLY LYS ILE ALA SEQRES 30 A 429 LYS ASP GLN VAL GLU TYR LEU MSE ALA ARG GLY LEU THR SEQRES 31 A 429 GLU ASP GLU ALA VAL GLY MSE ILE ILE ARG GLY PHE LEU SEQRES 32 A 429 ASP VAL GLY ILE ARG GLY ILE PRO GLU GLU LEU LYS GLU SEQRES 33 A 429 GLU ILE GLU ASN THR ILE ALA GLN THR ALA LEU GLY MSE SEQRES 1 B 429 MSE HIS HIS HIS HIS HIS HIS SER SER GLY VAL ASP LEU SEQRES 2 B 429 GLY THR GLU ASN LEU TYR PHE GLN SER MSE GLN THR GLU SEQRES 3 B 429 GLN VAL SER LEU LYS LYS ARG ALA GLU SER ALA ALA GLU SEQRES 4 B 429 LYS LYS ALA ALA PHE GLY GLU ASP PHE GLU LEU GLU LYS SEQRES 5 B 429 TYR GLU GLU GLY SER LYS VAL SER LYS PRO ILE GLU ASP SEQRES 6 B 429 LEU GLN SER LEU ASP GLU GLU SER LYS LYS THR LEU LEU SEQRES 7 B 429 GLN VAL GLY VAL ILE PRO SER GLU GLU GLY ARG SER GLY SEQRES 8 B 429 SER PHE LEU VAL LEU ASP ASN ALA VAL SER HIS SER THR SEQRES 9 B 429 LEU LYS ASP LYS ASN VAL GLU LEU MSE SER THR HIS LYS SEQRES 10 B 429 ALA MSE GLU LYS TYR GLU TRP LEU LYS ASP TYR SER TRP SEQRES 11 B 429 LYS LEU VAL GLN VAL ASP ALA ASP LYS TYR THR ALA LYS SEQRES 12 B 429 THR TYR LEU GLU ASP ALA ASP GLY TYR PHE ILE ARG VAL SEQRES 13 B 429 PRO ALA GLY LYS LYS THR SER MSE PRO VAL GLN THR CYS SEQRES 14 B 429 LEU MSE LEU GLY SER LYS LYS ALA ALA GLN THR VAL HIS SEQRES 15 B 429 ASN ILE ILE ILE VAL GLU GLU GLY ALA THR LEU ASP ILE SEQRES 16 B 429 ILE THR GLY CYS THR THR LYS LYS GLY VAL GLU GLU GLY SEQRES 17 B 429 LEU HIS LEU GLY ILE SER GLU MSE TYR ILE LYS LYS GLY SEQRES 18 B 429 GLY THR LEU ASN PHE THR MSE ILE HIS ASN TRP ALA GLU SEQRES 19 B 429 GLN ILE GLY VAL ARG PRO ARG THR VAL VAL SER VAL GLU SEQRES 20 B 429 GLU GLY GLY THR TYR VAL SER ASN TYR ILE CYS LEU LYS SEQRES 21 B 429 PRO VAL ARG SER VAL GLN THR TYR PRO THR VAL ARG LEU SEQRES 22 B 429 GLU GLY GLU GLY ALA VAL THR ARG LEU ASN THR ILE ALA SEQRES 23 B 429 ILE ALA HIS PRO GLY SER GLU LEU ASP LEU GLY SER LYS SEQRES 24 B 429 ALA ILE PHE ASN ALA PRO GLY THR ARG ALA GLU LEU ILE SEQRES 25 B 429 SER ARG THR ILE THR ILE GLY GLY ARG LEU ILE ALA ARG SEQRES 26 B 429 GLY GLU MSE ILE GLY ASN ALA LYS GLY ALA LYS GLY HIS SEQRES 27 B 429 LEU GLU CYS LYS GLY LEU VAL LEU THR ASP LYS GLY SER SEQRES 28 B 429 GLN LEU ALA ILE PRO ILE LEU GLU ALA ASN VAL ASP ASP SEQRES 29 B 429 ILE GLU LEU THR HIS GLU ALA ALA VAL GLY LYS ILE ALA SEQRES 30 B 429 LYS ASP GLN VAL GLU TYR LEU MSE ALA ARG GLY LEU THR SEQRES 31 B 429 GLU ASP GLU ALA VAL GLY MSE ILE ILE ARG GLY PHE LEU SEQRES 32 B 429 ASP VAL GLY ILE ARG GLY ILE PRO GLU GLU LEU LYS GLU SEQRES 33 B 429 GLU ILE GLU ASN THR ILE ALA GLN THR ALA LEU GLY MSE MODRES 4DN7 MSE A 91 MET SELENOMETHIONINE MODRES 4DN7 MSE A 97 MET SELENOMETHIONINE MODRES 4DN7 MSE A 142 MET SELENOMETHIONINE MODRES 4DN7 MSE A 149 MET SELENOMETHIONINE MODRES 4DN7 MSE A 194 MET SELENOMETHIONINE MODRES 4DN7 MSE A 206 MET SELENOMETHIONINE MODRES 4DN7 MSE A 306 MET SELENOMETHIONINE MODRES 4DN7 MSE A 363 MET SELENOMETHIONINE MODRES 4DN7 MSE A 375 MET SELENOMETHIONINE MODRES 4DN7 MSE A 407 MET SELENOMETHIONINE MODRES 4DN7 MSE B 91 MET SELENOMETHIONINE MODRES 4DN7 MSE B 97 MET SELENOMETHIONINE MODRES 4DN7 MSE B 142 MET SELENOMETHIONINE MODRES 4DN7 MSE B 149 MET SELENOMETHIONINE MODRES 4DN7 MSE B 194 MET SELENOMETHIONINE MODRES 4DN7 MSE B 206 MET SELENOMETHIONINE MODRES 4DN7 MSE B 306 MET SELENOMETHIONINE MODRES 4DN7 MSE B 363 MET SELENOMETHIONINE MODRES 4DN7 MSE B 375 MET SELENOMETHIONINE MODRES 4DN7 MSE B 407 MET SELENOMETHIONINE HET MSE A 91 8 HET MSE A 97 8 HET MSE A 142 8 HET MSE A 149 8 HET MSE A 194 8 HET MSE A 206 8 HET MSE A 306 8 HET MSE A 363 8 HET MSE A 375 8 HET MSE A 407 9 HET MSE B 91 8 HET MSE B 97 8 HET MSE B 142 8 HET MSE B 149 8 HET MSE B 194 8 HET MSE B 206 8 HET MSE B 306 8 HET MSE B 363 8 HET MSE B 375 8 HET MSE B 407 9 HET 1PE A 500 8 HET 1PE A 501 14 HET 1PE B 500 8 HET 1PE B 501 8 HETNAM MSE SELENOMETHIONINE HETNAM 1PE PENTAETHYLENE GLYCOL HETSYN 1PE PEG400 FORMUL 1 MSE 20(C5 H11 N O2 SE) FORMUL 3 1PE 4(C10 H22 O6) FORMUL 7 HOH *511(H2 O) HELIX 1 1 GLN A 2 ALA A 15 1 14 HELIX 2 2 GLU A 27 TYR A 31 5 5 HELIX 3 3 ASP A 43 LEU A 47 5 5 HELIX 4 4 ASP A 48 VAL A 58 1 11 HELIX 5 5 THR A 93 TYR A 100 1 8 HELIX 6 6 GLU A 101 TYR A 106 5 6 HELIX 7 7 ASP A 116 GLU A 125 1 10 HELIX 8 8 ALA A 355 ARG A 365 1 11 HELIX 9 9 THR A 368 VAL A 383 1 16 HELIX 10 10 GLY A 384 ARG A 386 5 3 HELIX 11 11 PRO A 389 GLU A 391 5 3 HELIX 12 12 LEU A 392 GLY A 406 1 15 HELIX 13 13 THR B 3 ALA B 15 1 13 HELIX 14 14 GLU B 27 TYR B 31 5 5 HELIX 15 15 ASP B 43 LEU B 47 5 5 HELIX 16 16 ASP B 48 VAL B 58 1 11 HELIX 17 17 THR B 93 TYR B 100 1 8 HELIX 18 18 GLU B 101 TYR B 106 5 6 HELIX 19 19 ASP B 116 GLU B 125 1 10 HELIX 20 20 ALA B 355 ARG B 365 1 11 HELIX 21 21 THR B 368 VAL B 383 1 16 HELIX 22 22 GLY B 384 ARG B 386 5 3 HELIX 23 23 PRO B 389 GLU B 391 5 3 HELIX 24 24 LEU B 392 GLY B 406 1 15 LINK C LEU A 90 N MSE A 91 1555 1555 1.33 LINK C MSE A 91 N SER A 92 1555 1555 1.33 LINK C ALA A 96 N MSE A 97 1555 1555 1.33 LINK C MSE A 97 N GLU A 98 1555 1555 1.33 LINK C SER A 141 N MSE A 142 1555 1555 1.34 LINK C MSE A 142 N PRO A 143 1555 1555 1.35 LINK C LEU A 148 N MSE A 149 1555 1555 1.32 LINK C MSE A 149 N LEU A 150 1555 1555 1.33 LINK C GLU A 193 N MSE A 194 1555 1555 1.33 LINK C MSE A 194 N TYR A 195 1555 1555 1.34 LINK C THR A 205 N MSE A 206 1555 1555 1.33 LINK C MSE A 206 N ILE A 207 1555 1555 1.33 LINK C GLU A 305 N MSE A 306 1555 1555 1.34 LINK C MSE A 306 N ILE A 307 1555 1555 1.33 LINK C LEU A 362 N MSE A 363 1555 1555 1.34 LINK C MSE A 363 N ALA A 364 1555 1555 1.33 LINK C GLY A 374 N MSE A 375 1555 1555 1.34 LINK C MSE A 375 N ILE A 376 1555 1555 1.33 LINK C GLY A 406 N MSE A 407 1555 1555 1.33 LINK C LEU B 90 N MSE B 91 1555 1555 1.33 LINK C MSE B 91 N SER B 92 1555 1555 1.33 LINK C ALA B 96 N MSE B 97 1555 1555 1.34 LINK C MSE B 97 N GLU B 98 1555 1555 1.33 LINK C SER B 141 N MSE B 142 1555 1555 1.34 LINK C MSE B 142 N PRO B 143 1555 1555 1.35 LINK C LEU B 148 N MSE B 149 1555 1555 1.33 LINK C MSE B 149 N LEU B 150 1555 1555 1.33 LINK C GLU B 193 N MSE B 194 1555 1555 1.33 LINK C MSE B 194 N TYR B 195 1555 1555 1.34 LINK C THR B 205 N MSE B 206 1555 1555 1.33 LINK C MSE B 206 N ILE B 207 1555 1555 1.33 LINK C GLU B 305 N MSE B 306 1555 1555 1.34 LINK C MSE B 306 N ILE B 307 1555 1555 1.34 LINK C LEU B 362 N MSE B 363 1555 1555 1.34 LINK C MSE B 363 N ALA B 364 1555 1555 1.34 LINK C GLY B 374 N MSE B 375 1555 1555 1.33 LINK C MSE B 375 N ILE B 376 1555 1555 1.33 LINK C GLY B 406 N MSE B 407 1555 1555 1.33 SITE 1 AC1 6 ASP A 105 TYR A 106 TYR A 195 HOH A 607 SITE 2 AC1 6 HOH A 788 HOH A 801 SITE 1 AC2 10 LYS A 320 LEU A 322 ALA A 350 VAL A 351 SITE 2 AC2 10 LYS A 353 PHE A 380 HOH A 650 HOH A 763 SITE 3 AC2 10 HOH A 868 THR B 346 SITE 1 AC3 4 ASP B 105 TYR B 106 TYR B 195 HOH B 835 SITE 1 AC4 4 ALA B 350 VAL B 351 GLY B 352 HOH B 802 CRYST1 52.913 52.879 88.142 106.51 97.43 105.91 P 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018899 0.005386 0.004531 0.00000 SCALE2 0.000000 0.019664 0.006995 0.00000 SCALE3 0.000000 0.000000 0.012144 0.00000