data_4DNH # _entry.id 4DNH # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.281 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 4DNH RCSB RCSB070548 WWPDB D_1000070548 # _pdbx_database_related.db_name TargetTrack _pdbx_database_related.db_id NYSGRC-019670 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.entry_id 4DNH _pdbx_database_status.status_code REL _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2012-02-08 _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Malashkevich, V.N.' 1 'Bhosle, R.' 2 'Toro, R.' 3 'Seidel, R.' 4 'Almo, S.C.' 5 'New York Structural Genomics Research Consortium (NYSGRC)' 6 # _citation.id primary _citation.title 'Crystal structure of hypothetical protein SMc04132 from Sinorhizobium meliloti 1021' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Malashkevich, V.N.' 1 primary 'Bhosle, R.' 2 primary 'Toro, R.' 3 primary 'Seidel, R.' 4 primary 'Almo, S.C.' 5 # _cell.entry_id 4DNH _cell.length_a 75.291 _cell.length_b 75.291 _cell.length_c 139.518 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 120.000 _cell.pdbx_unique_axis ? _cell.Z_PDB 6 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'P 32 2 1' _symmetry.entry_id 4DNH _symmetry.Int_Tables_number 154 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Uncharacterized protein' 43883.219 1 ? ? ? ? 2 non-polymer syn GLYCEROL 92.094 2 ? ? ? ? 3 water nat water 18.015 95 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;SLVSIDLPIEGRLARYDLTGRPVPFNSRDAKAFSRVAFAAAHVVADPLADNDPWLAPAIDWERTLAFRHRLWDLGLGVAE S(MSE)DTAQRG(MSE)GLGWPEARELIRRSLAEARGRPDALIACGAGTDHLAPGPDVSIDDILAAYESQIEAIEAEGGR IIL(MSE)ASRALAAAAKGPEDYIRVYDRVLSQVKEPVIIHWLGE(MSE)FDPALEGYWGNADH(MSE)AA(MSE)KTCL DVLEAHAAKVDGIKISLLSKEKEIV(MSE)RRQLPKGVR(MSE)YTGDDFNYAELIAGDEEGHSDALLGIFDAIAPVASA ALEALGSGRNGEFFELLEPTVPLSRHIFKAPTRFYKTGVVFLAYLNGLQDHFV(MSE)IGGQQSARSLVHLAELFRLADK AGALADPELATAR(MSE)RRVLA(MSE)HGVEEGHHHHHH ; _entity_poly.pdbx_seq_one_letter_code_can ;SLVSIDLPIEGRLARYDLTGRPVPFNSRDAKAFSRVAFAAAHVVADPLADNDPWLAPAIDWERTLAFRHRLWDLGLGVAE SMDTAQRGMGLGWPEARELIRRSLAEARGRPDALIACGAGTDHLAPGPDVSIDDILAAYESQIEAIEAEGGRIILMASRA LAAAAKGPEDYIRVYDRVLSQVKEPVIIHWLGEMFDPALEGYWGNADHMAAMKTCLDVLEAHAAKVDGIKISLLSKEKEI VMRRQLPKGVRMYTGDDFNYAELIAGDEEGHSDALLGIFDAIAPVASAALEALGSGRNGEFFELLEPTVPLSRHIFKAPT RFYKTGVVFLAYLNGLQDHFVMIGGQQSARSLVHLAELFRLADKAGALADPELATARMRRVLAMHGVEEGHHHHHH ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier NYSGRC-019670 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 LEU n 1 3 VAL n 1 4 SER n 1 5 ILE n 1 6 ASP n 1 7 LEU n 1 8 PRO n 1 9 ILE n 1 10 GLU n 1 11 GLY n 1 12 ARG n 1 13 LEU n 1 14 ALA n 1 15 ARG n 1 16 TYR n 1 17 ASP n 1 18 LEU n 1 19 THR n 1 20 GLY n 1 21 ARG n 1 22 PRO n 1 23 VAL n 1 24 PRO n 1 25 PHE n 1 26 ASN n 1 27 SER n 1 28 ARG n 1 29 ASP n 1 30 ALA n 1 31 LYS n 1 32 ALA n 1 33 PHE n 1 34 SER n 1 35 ARG n 1 36 VAL n 1 37 ALA n 1 38 PHE n 1 39 ALA n 1 40 ALA n 1 41 ALA n 1 42 HIS n 1 43 VAL n 1 44 VAL n 1 45 ALA n 1 46 ASP n 1 47 PRO n 1 48 LEU n 1 49 ALA n 1 50 ASP n 1 51 ASN n 1 52 ASP n 1 53 PRO n 1 54 TRP n 1 55 LEU n 1 56 ALA n 1 57 PRO n 1 58 ALA n 1 59 ILE n 1 60 ASP n 1 61 TRP n 1 62 GLU n 1 63 ARG n 1 64 THR n 1 65 LEU n 1 66 ALA n 1 67 PHE n 1 68 ARG n 1 69 HIS n 1 70 ARG n 1 71 LEU n 1 72 TRP n 1 73 ASP n 1 74 LEU n 1 75 GLY n 1 76 LEU n 1 77 GLY n 1 78 VAL n 1 79 ALA n 1 80 GLU n 1 81 SER n 1 82 MSE n 1 83 ASP n 1 84 THR n 1 85 ALA n 1 86 GLN n 1 87 ARG n 1 88 GLY n 1 89 MSE n 1 90 GLY n 1 91 LEU n 1 92 GLY n 1 93 TRP n 1 94 PRO n 1 95 GLU n 1 96 ALA n 1 97 ARG n 1 98 GLU n 1 99 LEU n 1 100 ILE n 1 101 ARG n 1 102 ARG n 1 103 SER n 1 104 LEU n 1 105 ALA n 1 106 GLU n 1 107 ALA n 1 108 ARG n 1 109 GLY n 1 110 ARG n 1 111 PRO n 1 112 ASP n 1 113 ALA n 1 114 LEU n 1 115 ILE n 1 116 ALA n 1 117 CYS n 1 118 GLY n 1 119 ALA n 1 120 GLY n 1 121 THR n 1 122 ASP n 1 123 HIS n 1 124 LEU n 1 125 ALA n 1 126 PRO n 1 127 GLY n 1 128 PRO n 1 129 ASP n 1 130 VAL n 1 131 SER n 1 132 ILE n 1 133 ASP n 1 134 ASP n 1 135 ILE n 1 136 LEU n 1 137 ALA n 1 138 ALA n 1 139 TYR n 1 140 GLU n 1 141 SER n 1 142 GLN n 1 143 ILE n 1 144 GLU n 1 145 ALA n 1 146 ILE n 1 147 GLU n 1 148 ALA n 1 149 GLU n 1 150 GLY n 1 151 GLY n 1 152 ARG n 1 153 ILE n 1 154 ILE n 1 155 LEU n 1 156 MSE n 1 157 ALA n 1 158 SER n 1 159 ARG n 1 160 ALA n 1 161 LEU n 1 162 ALA n 1 163 ALA n 1 164 ALA n 1 165 ALA n 1 166 LYS n 1 167 GLY n 1 168 PRO n 1 169 GLU n 1 170 ASP n 1 171 TYR n 1 172 ILE n 1 173 ARG n 1 174 VAL n 1 175 TYR n 1 176 ASP n 1 177 ARG n 1 178 VAL n 1 179 LEU n 1 180 SER n 1 181 GLN n 1 182 VAL n 1 183 LYS n 1 184 GLU n 1 185 PRO n 1 186 VAL n 1 187 ILE n 1 188 ILE n 1 189 HIS n 1 190 TRP n 1 191 LEU n 1 192 GLY n 1 193 GLU n 1 194 MSE n 1 195 PHE n 1 196 ASP n 1 197 PRO n 1 198 ALA n 1 199 LEU n 1 200 GLU n 1 201 GLY n 1 202 TYR n 1 203 TRP n 1 204 GLY n 1 205 ASN n 1 206 ALA n 1 207 ASP n 1 208 HIS n 1 209 MSE n 1 210 ALA n 1 211 ALA n 1 212 MSE n 1 213 LYS n 1 214 THR n 1 215 CYS n 1 216 LEU n 1 217 ASP n 1 218 VAL n 1 219 LEU n 1 220 GLU n 1 221 ALA n 1 222 HIS n 1 223 ALA n 1 224 ALA n 1 225 LYS n 1 226 VAL n 1 227 ASP n 1 228 GLY n 1 229 ILE n 1 230 LYS n 1 231 ILE n 1 232 SER n 1 233 LEU n 1 234 LEU n 1 235 SER n 1 236 LYS n 1 237 GLU n 1 238 LYS n 1 239 GLU n 1 240 ILE n 1 241 VAL n 1 242 MSE n 1 243 ARG n 1 244 ARG n 1 245 GLN n 1 246 LEU n 1 247 PRO n 1 248 LYS n 1 249 GLY n 1 250 VAL n 1 251 ARG n 1 252 MSE n 1 253 TYR n 1 254 THR n 1 255 GLY n 1 256 ASP n 1 257 ASP n 1 258 PHE n 1 259 ASN n 1 260 TYR n 1 261 ALA n 1 262 GLU n 1 263 LEU n 1 264 ILE n 1 265 ALA n 1 266 GLY n 1 267 ASP n 1 268 GLU n 1 269 GLU n 1 270 GLY n 1 271 HIS n 1 272 SER n 1 273 ASP n 1 274 ALA n 1 275 LEU n 1 276 LEU n 1 277 GLY n 1 278 ILE n 1 279 PHE n 1 280 ASP n 1 281 ALA n 1 282 ILE n 1 283 ALA n 1 284 PRO n 1 285 VAL n 1 286 ALA n 1 287 SER n 1 288 ALA n 1 289 ALA n 1 290 LEU n 1 291 GLU n 1 292 ALA n 1 293 LEU n 1 294 GLY n 1 295 SER n 1 296 GLY n 1 297 ARG n 1 298 ASN n 1 299 GLY n 1 300 GLU n 1 301 PHE n 1 302 PHE n 1 303 GLU n 1 304 LEU n 1 305 LEU n 1 306 GLU n 1 307 PRO n 1 308 THR n 1 309 VAL n 1 310 PRO n 1 311 LEU n 1 312 SER n 1 313 ARG n 1 314 HIS n 1 315 ILE n 1 316 PHE n 1 317 LYS n 1 318 ALA n 1 319 PRO n 1 320 THR n 1 321 ARG n 1 322 PHE n 1 323 TYR n 1 324 LYS n 1 325 THR n 1 326 GLY n 1 327 VAL n 1 328 VAL n 1 329 PHE n 1 330 LEU n 1 331 ALA n 1 332 TYR n 1 333 LEU n 1 334 ASN n 1 335 GLY n 1 336 LEU n 1 337 GLN n 1 338 ASP n 1 339 HIS n 1 340 PHE n 1 341 VAL n 1 342 MSE n 1 343 ILE n 1 344 GLY n 1 345 GLY n 1 346 GLN n 1 347 GLN n 1 348 SER n 1 349 ALA n 1 350 ARG n 1 351 SER n 1 352 LEU n 1 353 VAL n 1 354 HIS n 1 355 LEU n 1 356 ALA n 1 357 GLU n 1 358 LEU n 1 359 PHE n 1 360 ARG n 1 361 LEU n 1 362 ALA n 1 363 ASP n 1 364 LYS n 1 365 ALA n 1 366 GLY n 1 367 ALA n 1 368 LEU n 1 369 ALA n 1 370 ASP n 1 371 PRO n 1 372 GLU n 1 373 LEU n 1 374 ALA n 1 375 THR n 1 376 ALA n 1 377 ARG n 1 378 MSE n 1 379 ARG n 1 380 ARG n 1 381 VAL n 1 382 LEU n 1 383 ALA n 1 384 MSE n 1 385 HIS n 1 386 GLY n 1 387 VAL n 1 388 GLU n 1 389 GLU n 1 390 GLY n 1 391 HIS n 1 392 HIS n 1 393 HIS n 1 394 HIS n 1 395 HIS n 1 396 HIS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'NP_384226.1, R00120, SMc04132' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 1021 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Sinorhizobium meliloti' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 266834 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)CODON+RIL' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name 'BC-PSGX3(BC)' _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q92T60_RHIME _struct_ref.pdbx_db_accession Q92T60 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;VSIDLPIEGRLARYDLTGRPVPFNSRDAKAFSRVAFAAAHVVADPLADNDPWLAPAIDWERTLAFRHRLWDLGLGVAESM DTAQRGMGLGWPEARELIRRSLAEARGRPDALIACGAGTDHLAPGPDVSIDDILAAYESQIEAIEAEGGRIILMASRALA AAAKGPEDYIRVYDRVLSQVKEPVIIHWLGEMFDPALEGYWGNADHMAAMKTCLDVLEAHAAKVDGIKISLLSKEKEIVM RRQLPKGVRMYTGDDFNYAELIAGDEEGHSDALLGIFDAIAPVASAALEALGSGRNGEFFELLEPTVPLSRHIFKAPTRF YKTGVVFLAYLNGLQDHFVMIGGQQSARSLVHLAELFRLADKAGALADPELATARMRRVLAMHGVE ; _struct_ref.pdbx_align_begin 2 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4DNH _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 3 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 388 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q92T60 _struct_ref_seq.db_align_beg 2 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 387 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 4 _struct_ref_seq.pdbx_auth_seq_align_end 389 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4DNH SER A 1 ? UNP Q92T60 ? ? 'EXPRESSION TAG' 2 1 1 4DNH LEU A 2 ? UNP Q92T60 ? ? 'EXPRESSION TAG' 3 2 1 4DNH GLU A 389 ? UNP Q92T60 ? ? 'EXPRESSION TAG' 390 3 1 4DNH GLY A 390 ? UNP Q92T60 ? ? 'EXPRESSION TAG' 391 4 1 4DNH HIS A 391 ? UNP Q92T60 ? ? 'EXPRESSION TAG' 392 5 1 4DNH HIS A 392 ? UNP Q92T60 ? ? 'EXPRESSION TAG' 393 6 1 4DNH HIS A 393 ? UNP Q92T60 ? ? 'EXPRESSION TAG' 394 7 1 4DNH HIS A 394 ? UNP Q92T60 ? ? 'EXPRESSION TAG' 395 8 1 4DNH HIS A 395 ? UNP Q92T60 ? ? 'EXPRESSION TAG' 396 9 1 4DNH HIS A 396 ? UNP Q92T60 ? ? 'EXPRESSION TAG' 397 10 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.entry_id 4DNH _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.pdbx_mosaicity 0.412 _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.density_Matthews 2.60 _exptl_crystal.density_diffrn ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_percent_sol 52.72 _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pH 7.0 _exptl_crystal_grow.temp 298 _exptl_crystal_grow.pdbx_details '20% PEG3000, 0.1 M Tris, pH 7.0, 0.2 M Ca(OAc), VAPOR DIFFUSION, SITTING DROP, temperature 298K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.pdbx_collection_date 2009-06-17 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9791 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'NSLS BEAMLINE X29A' _diffrn_source.pdbx_wavelength_list 0.9791 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site NSLS _diffrn_source.pdbx_synchrotron_beamline X29A # _reflns.entry_id 4DNH _reflns.d_resolution_high 2.501 _reflns.d_resolution_low 50.000 _reflns.pdbx_number_measured_all 104452 _reflns.number_obs 16435 _reflns.pdbx_Rmerge_I_obs 0.121 _reflns.pdbx_netI_over_av_sigmaI 13.635 _reflns.pdbx_netI_over_sigmaI 7.100 _reflns.pdbx_chi_squared 1.325 _reflns.pdbx_redundancy 3.800 _reflns.percent_possible_obs 99.900 _reflns.pdbx_Rrim_I_all 0.121 _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.number_all ? _reflns.pdbx_Rsym_value ? _reflns.B_iso_Wilson_estimate ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.pdbx_rejects _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.number_possible _reflns_shell.number_unique_all _reflns_shell.Rmerge_F_all _reflns_shell.Rmerge_F_obs _reflns_shell.Rmerge_I_all _reflns_shell.meanI_over_sigI_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_Rrim_I_all _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 2.501 2.640 ? ? ? ? 0.981 ? ? 0.888 3.800 ? ? ? 1336 ? ? ? ? 100.000 ? ? 1 1 2.640 2.690 ? ? ? ? 0.869 ? ? 0.898 3.800 ? ? ? 1375 ? ? ? ? 100.000 ? ? 2 1 2.690 2.740 ? ? ? ? 0.751 ? ? 0.889 3.800 ? ? ? 1350 ? ? ? ? 100.000 ? ? 3 1 2.740 2.800 ? ? ? ? 0.674 ? ? 0.909 3.800 ? ? ? 1381 ? ? ? ? 100.000 ? ? 4 1 2.800 2.860 ? ? ? ? 0.560 ? ? 0.968 3.800 ? ? ? 1348 ? ? ? ? 100.000 ? ? 5 1 2.860 2.930 ? ? ? ? 0.463 ? ? 0.966 3.800 ? ? ? 1373 ? ? ? ? 100.000 ? ? 6 1 2.930 3.000 ? ? ? ? 0.372 ? ? 0.944 3.800 ? ? ? 1354 ? ? ? ? 100.000 ? ? 7 1 3.000 3.080 ? ? ? ? 0.326 ? ? 0.972 3.900 ? ? ? 1397 ? ? ? ? 100.000 ? ? 8 1 3.080 3.170 ? ? ? ? 0.292 ? ? 0.987 3.900 ? ? ? 1354 ? ? ? ? 100.000 ? ? 9 1 3.170 3.280 ? ? ? ? 0.217 ? ? 0.987 3.900 ? ? ? 1361 ? ? ? ? 100.000 ? ? 10 1 3.280 3.390 ? ? ? ? 0.174 ? ? 1.125 3.900 ? ? ? 1355 ? ? ? ? 100.000 ? ? 11 1 3.390 3.530 ? ? ? ? 0.139 ? ? 1.166 3.800 ? ? ? 1383 ? ? ? ? 100.000 ? ? 12 1 3.530 3.690 ? ? ? ? 0.120 ? ? 1.430 3.900 ? ? ? 1351 ? ? ? ? 100.000 ? ? 13 1 3.690 3.880 ? ? ? ? 0.099 ? ? 1.716 3.900 ? ? ? 1357 ? ? ? ? 100.000 ? ? 14 1 3.880 4.130 ? ? ? ? 0.084 ? ? 1.713 3.800 ? ? ? 1370 ? ? ? ? 99.900 ? ? 15 1 4.130 4.450 ? ? ? ? 0.080 ? ? 2.268 3.800 ? ? ? 1370 ? ? ? ? 99.900 ? ? 16 1 4.450 4.890 ? ? ? ? 0.064 ? ? 1.967 3.800 ? ? ? 1357 ? ? ? ? 99.800 ? ? 17 1 4.890 5.600 ? ? ? ? 0.064 ? ? 1.733 3.700 ? ? ? 1354 ? ? ? ? 100.000 ? ? 18 1 5.600 7.050 ? ? ? ? 0.063 ? ? 1.788 3.900 ? ? ? 1379 ? ? ? ? 99.700 ? ? 19 1 7.050 50.000 ? ? ? ? 0.044 ? ? 2.244 3.800 ? ? ? 1361 ? ? ? ? 98.800 ? ? 20 1 # _refine.entry_id 4DNH _refine.ls_d_res_high 2.5000 _refine.ls_d_res_low 20.0000 _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 99.8100 _refine.ls_number_reflns_obs 16404 _refine.ls_number_reflns_all ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details 'U VALUES : WITH TLS ADDED HYDROGENS HAVE BEEN USED IF PRESENT IN THE INPUT' _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1773 _refine.ls_R_factor_R_work 0.1739 _refine.ls_wR_factor_R_work 0.1524 _refine.ls_R_factor_R_free 0.2401 _refine.ls_wR_factor_R_free 0.2113 _refine.ls_percent_reflns_R_free 5.1000 _refine.ls_number_reflns_R_free 831 _refine.ls_number_reflns_R_work 15573 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 54.5714 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] -0.0500 _refine.aniso_B[2][2] -0.0500 _refine.aniso_B[3][3] 0.0800 _refine.aniso_B[1][2] -0.0300 _refine.aniso_B[1][3] 0.0000 _refine.aniso_B[2][3] 0.0000 _refine.correlation_coeff_Fo_to_Fc 0.9620 _refine.correlation_coeff_Fo_to_Fc_free 0.9300 _refine.overall_SU_R_Cruickshank_DPI 0.4285 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.overall_SU_R_free 0.2715 _refine.pdbx_overall_ESU_R 0.4280 _refine.pdbx_overall_ESU_R_Free 0.2720 _refine.overall_SU_ML 0.1980 _refine.overall_SU_B 18.0830 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.2000 _refine.pdbx_solvent_ion_probe_radii 0.8000 _refine.pdbx_solvent_shrinkage_radii 0.8000 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set 0.8625 _refine.B_iso_max 133.660 _refine.B_iso_min 13.500 _refine.pdbx_overall_phase_error ? _refine.occupancy_max 1.000 _refine.occupancy_min 0.500 _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_TLS_residual_ADP_flag ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2960 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 12 _refine_hist.number_atoms_solvent 95 _refine_hist.number_atoms_total 3067 _refine_hist.d_res_high 2.5000 _refine_hist.d_res_low 20.0000 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' r_bond_refined_d 3039 0.008 0.019 ? ? 'X-RAY DIFFRACTION' r_angle_refined_deg 4115 1.382 1.981 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_1_deg 385 5.654 5.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_2_deg 135 34.907 22.889 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_3_deg 460 17.948 15.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_4_deg 28 18.958 15.000 ? ? 'X-RAY DIFFRACTION' r_chiral_restr 455 0.090 0.200 ? ? 'X-RAY DIFFRACTION' r_gen_planes_refined 2320 0.005 0.021 ? ? # _refine_ls_shell.d_res_high 2.5010 _refine_ls_shell.d_res_low 2.5650 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 99.5300 _refine_ls_shell.number_reflns_R_work 1003 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.2620 _refine_ls_shell.R_factor_R_free 0.3760 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 62 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 1065 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.redundancy_reflns_obs ? # _struct.entry_id 4DNH _struct.title 'Crystal structure of hypothetical protein SMc04132 from Sinorhizobium meliloti 1021' _struct.pdbx_descriptor 'Uncharacterized protein' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4DNH _struct_keywords.text ;STRUCTURAL GENOMICS, PSI-BIOLOGY, Protein Structure Initiative, New York Structural Genomics Research Consortium, NYSGRC, Unknown Function ; _struct_keywords.pdbx_keywords 'Structural Genomics, Unknown Function' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 3 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASP A 29 ? PHE A 33 ? ASP A 30 PHE A 34 5 ? 5 HELX_P HELX_P2 2 ASP A 60 ? LEU A 74 ? ASP A 61 LEU A 75 1 ? 15 HELX_P HELX_P3 3 MSE A 82 ? GLN A 86 ? MSE A 83 GLN A 87 5 ? 5 HELX_P HELX_P4 4 GLY A 92 ? GLY A 109 ? GLY A 93 GLY A 110 1 ? 18 HELX_P HELX_P5 5 SER A 131 ? GLU A 149 ? SER A 132 GLU A 150 1 ? 19 HELX_P HELX_P6 6 SER A 158 ? ALA A 165 ? SER A 159 ALA A 166 1 ? 8 HELX_P HELX_P7 7 GLY A 167 ? VAL A 182 ? GLY A 168 VAL A 183 1 ? 16 HELX_P HELX_P8 8 ASP A 196 ? GLU A 200 ? ASP A 197 GLU A 201 5 ? 5 HELX_P HELX_P9 9 ASP A 207 ? HIS A 222 ? ASP A 208 HIS A 223 1 ? 16 HELX_P HELX_P10 10 SER A 235 ? ARG A 244 ? SER A 236 ARG A 245 1 ? 10 HELX_P HELX_P11 11 ASN A 259 ? GLY A 266 ? ASN A 260 GLY A 267 1 ? 8 HELX_P HELX_P12 12 GLY A 277 ? ILE A 282 ? GLY A 278 ILE A 283 1 ? 6 HELX_P HELX_P13 13 ILE A 282 ? SER A 295 ? ILE A 283 SER A 296 1 ? 14 HELX_P HELX_P14 14 ARG A 297 ? GLU A 306 ? ARG A 298 GLU A 307 1 ? 10 HELX_P HELX_P15 15 PRO A 307 ? PHE A 316 ? PRO A 308 PHE A 317 1 ? 10 HELX_P HELX_P16 16 PRO A 319 ? ARG A 321 ? PRO A 320 ARG A 322 5 ? 3 HELX_P HELX_P17 17 PHE A 322 ? ASN A 334 ? PHE A 323 ASN A 335 1 ? 13 HELX_P HELX_P18 18 MSE A 342 ? ALA A 349 ? MSE A 343 ALA A 350 5 ? 8 HELX_P HELX_P19 19 SER A 351 ? ALA A 365 ? SER A 352 ALA A 366 1 ? 15 HELX_P HELX_P20 20 ASP A 370 ? HIS A 385 ? ASP A 371 HIS A 386 1 ? 16 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale ? ? A SER 81 C ? ? ? 1_555 A MSE 82 N ? ? A SER 82 A MSE 83 1_555 ? ? ? ? ? ? ? 1.323 ? covale2 covale ? ? A MSE 82 C ? ? ? 1_555 A ASP 83 N ? ? A MSE 83 A ASP 84 1_555 ? ? ? ? ? ? ? 1.326 ? covale3 covale ? ? A GLY 88 C ? ? ? 1_555 A MSE 89 N ? ? A GLY 89 A MSE 90 1_555 ? ? ? ? ? ? ? 1.337 ? covale4 covale ? ? A MSE 89 C ? ? ? 1_555 A GLY 90 N ? ? A MSE 90 A GLY 91 1_555 ? ? ? ? ? ? ? 1.331 ? covale5 covale ? ? A LEU 155 C ? ? ? 1_555 A MSE 156 N ? ? A LEU 156 A MSE 157 1_555 ? ? ? ? ? ? ? 1.328 ? covale6 covale ? ? A MSE 156 C ? ? ? 1_555 A ALA 157 N ? ? A MSE 157 A ALA 158 1_555 ? ? ? ? ? ? ? 1.331 ? covale7 covale ? ? A GLU 193 C ? ? ? 1_555 A MSE 194 N ? ? A GLU 194 A MSE 195 1_555 ? ? ? ? ? ? ? 1.325 ? covale8 covale ? ? A MSE 194 C ? ? ? 1_555 A PHE 195 N ? ? A MSE 195 A PHE 196 1_555 ? ? ? ? ? ? ? 1.329 ? covale9 covale ? ? A HIS 208 C ? ? ? 1_555 A MSE 209 N ? ? A HIS 209 A MSE 210 1_555 ? ? ? ? ? ? ? 1.329 ? covale10 covale ? ? A MSE 209 C ? ? ? 1_555 A ALA 210 N ? ? A MSE 210 A ALA 211 1_555 ? ? ? ? ? ? ? 1.325 ? covale11 covale ? ? A ALA 211 C ? ? ? 1_555 A MSE 212 N ? ? A ALA 212 A MSE 213 1_555 ? ? ? ? ? ? ? 1.333 ? covale12 covale ? ? A MSE 212 C ? ? ? 1_555 A LYS 213 N ? ? A MSE 213 A LYS 214 1_555 ? ? ? ? ? ? ? 1.336 ? covale13 covale ? ? A VAL 241 C ? ? ? 1_555 A MSE 242 N ? ? A VAL 242 A MSE 243 1_555 ? ? ? ? ? ? ? 1.324 ? covale14 covale ? ? A MSE 242 C ? ? ? 1_555 A ARG 243 N ? ? A MSE 243 A ARG 244 1_555 ? ? ? ? ? ? ? 1.329 ? covale15 covale ? ? A ARG 251 C ? ? ? 1_555 A MSE 252 N ? ? A ARG 252 A MSE 253 1_555 ? ? ? ? ? ? ? 1.334 ? covale16 covale ? ? A MSE 252 C ? ? ? 1_555 A TYR 253 N ? ? A MSE 253 A TYR 254 1_555 ? ? ? ? ? ? ? 1.328 ? covale17 covale ? ? A VAL 341 C ? ? ? 1_555 A MSE 342 N ? ? A VAL 342 A MSE 343 1_555 ? ? ? ? ? ? ? 1.328 ? covale18 covale ? ? A MSE 342 C ? ? ? 1_555 A ILE 343 N ? ? A MSE 343 A ILE 344 1_555 ? ? ? ? ? ? ? 1.332 ? covale19 covale ? ? A ARG 377 C ? ? ? 1_555 A MSE 378 N ? ? A ARG 378 A MSE 379 1_555 ? ? ? ? ? ? ? 1.335 ? covale20 covale ? ? A MSE 378 C ? ? ? 1_555 A ARG 379 N ? ? A MSE 379 A ARG 380 1_555 ? ? ? ? ? ? ? 1.331 ? covale21 covale ? ? A ALA 383 C ? ? ? 1_555 A MSE 384 N ? ? A ALA 384 A MSE 385 1_555 ? ? ? ? ? ? ? 1.331 ? covale22 covale ? ? A MSE 384 C ? ? ? 1_555 A HIS 385 N ? ? A MSE 385 A HIS 386 1_555 ? ? ? ? ? ? ? 1.332 ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id ALA _struct_mon_prot_cis.label_seq_id 318 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id ALA _struct_mon_prot_cis.auth_seq_id 319 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 319 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 320 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -4.58 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 2 ? B ? 9 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel B 1 2 ? parallel B 2 3 ? parallel B 3 4 ? parallel B 4 5 ? parallel B 5 6 ? parallel B 6 7 ? parallel B 7 8 ? parallel B 8 9 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 SER A 4 ? ILE A 9 ? SER A 5 ILE A 10 A 2 ARG A 12 ? ASP A 17 ? ARG A 13 ASP A 18 B 1 ALA A 37 ? ALA A 40 ? ALA A 38 ALA A 41 B 2 GLY A 77 ? GLU A 80 ? GLY A 78 GLU A 81 B 3 ILE A 115 ? ALA A 119 ? ILE A 116 ALA A 120 B 4 ILE A 153 ? LEU A 155 ? ILE A 154 LEU A 156 B 5 VAL A 186 ? LEU A 191 ? VAL A 187 LEU A 192 B 6 VAL A 226 ? SER A 232 ? VAL A 227 SER A 233 B 7 ARG A 251 ? THR A 254 ? ARG A 252 THR A 255 B 8 ASP A 273 ? LEU A 276 ? ASP A 274 LEU A 277 B 9 ALA A 37 ? ALA A 40 ? ALA A 38 ALA A 41 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N LEU A 7 ? N LEU A 8 O ALA A 14 ? O ALA A 15 B 1 2 N ALA A 37 ? N ALA A 38 O GLY A 77 ? O GLY A 78 B 2 3 N GLU A 80 ? N GLU A 81 O ALA A 116 ? O ALA A 117 B 3 4 N ALA A 119 ? N ALA A 120 O ILE A 154 ? O ILE A 155 B 4 5 N LEU A 155 ? N LEU A 156 O HIS A 189 ? O HIS A 190 B 5 6 N ILE A 188 ? N ILE A 189 O LYS A 230 ? O LYS A 231 B 6 7 N ASP A 227 ? N ASP A 228 O ARG A 251 ? O ARG A 252 B 7 8 N MSE A 252 ? N MSE A 253 O ASP A 273 ? O ASP A 274 B 8 9 O ALA A 274 ? O ALA A 275 N PHE A 38 ? N PHE A 39 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 8 'BINDING SITE FOR RESIDUE GOL A 500' AC2 Software ? ? ? ? 5 'BINDING SITE FOR RESIDUE GOL A 501' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 8 LEU A 191 ? LEU A 192 . ? 1_555 ? 2 AC1 8 PHE A 195 ? PHE A 196 . ? 1_555 ? 3 AC1 8 LYS A 230 ? LYS A 231 . ? 1_555 ? 4 AC1 8 SER A 232 ? SER A 233 . ? 1_555 ? 5 AC1 8 GLY A 255 ? GLY A 256 . ? 1_555 ? 6 AC1 8 ASP A 257 ? ASP A 258 . ? 1_555 ? 7 AC1 8 LEU A 276 ? LEU A 277 . ? 1_555 ? 8 AC1 8 GLY A 277 ? GLY A 278 . ? 1_555 ? 9 AC2 5 ASN A 26 ? ASN A 27 . ? 1_555 ? 10 AC2 5 SER A 27 ? SER A 28 . ? 1_555 ? 11 AC2 5 GLU A 193 ? GLU A 194 . ? 4_655 ? 12 AC2 5 GLU A 200 ? GLU A 201 . ? 4_655 ? 13 AC2 5 GLY A 201 ? GLY A 202 . ? 4_655 ? # _atom_sites.entry_id 4DNH _atom_sites.fract_transf_matrix[1][1] 0.013282 _atom_sites.fract_transf_matrix[1][2] 0.007668 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.015337 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.007168 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 2 ? ? ? A . n A 1 2 LEU 2 3 3 LEU LEU A . n A 1 3 VAL 3 4 4 VAL VAL A . n A 1 4 SER 4 5 5 SER SER A . n A 1 5 ILE 5 6 6 ILE ILE A . n A 1 6 ASP 6 7 7 ASP ASP A . n A 1 7 LEU 7 8 8 LEU LEU A . n A 1 8 PRO 8 9 9 PRO PRO A . n A 1 9 ILE 9 10 10 ILE ILE A . n A 1 10 GLU 10 11 11 GLU GLU A . n A 1 11 GLY 11 12 12 GLY GLY A . n A 1 12 ARG 12 13 13 ARG ARG A . n A 1 13 LEU 13 14 14 LEU LEU A . n A 1 14 ALA 14 15 15 ALA ALA A . n A 1 15 ARG 15 16 16 ARG ARG A . n A 1 16 TYR 16 17 17 TYR TYR A . n A 1 17 ASP 17 18 18 ASP ASP A . n A 1 18 LEU 18 19 19 LEU LEU A . n A 1 19 THR 19 20 20 THR THR A . n A 1 20 GLY 20 21 21 GLY GLY A . n A 1 21 ARG 21 22 22 ARG ARG A . n A 1 22 PRO 22 23 23 PRO PRO A . n A 1 23 VAL 23 24 24 VAL VAL A . n A 1 24 PRO 24 25 25 PRO PRO A . n A 1 25 PHE 25 26 26 PHE PHE A . n A 1 26 ASN 26 27 27 ASN ASN A . n A 1 27 SER 27 28 28 SER SER A . n A 1 28 ARG 28 29 29 ARG ARG A . n A 1 29 ASP 29 30 30 ASP ASP A . n A 1 30 ALA 30 31 31 ALA ALA A . n A 1 31 LYS 31 32 32 LYS LYS A . n A 1 32 ALA 32 33 33 ALA ALA A . n A 1 33 PHE 33 34 34 PHE PHE A . n A 1 34 SER 34 35 35 SER SER A . n A 1 35 ARG 35 36 36 ARG ARG A . n A 1 36 VAL 36 37 37 VAL VAL A . n A 1 37 ALA 37 38 38 ALA ALA A . n A 1 38 PHE 38 39 39 PHE PHE A . n A 1 39 ALA 39 40 40 ALA ALA A . n A 1 40 ALA 40 41 41 ALA ALA A . n A 1 41 ALA 41 42 42 ALA ALA A . n A 1 42 HIS 42 43 43 HIS HIS A . n A 1 43 VAL 43 44 44 VAL VAL A . n A 1 44 VAL 44 45 45 VAL VAL A . n A 1 45 ALA 45 46 46 ALA ALA A . n A 1 46 ASP 46 47 47 ASP ASP A . n A 1 47 PRO 47 48 48 PRO PRO A . n A 1 48 LEU 48 49 49 LEU LEU A . n A 1 49 ALA 49 50 50 ALA ALA A . n A 1 50 ASP 50 51 51 ASP ASP A . n A 1 51 ASN 51 52 52 ASN ASN A . n A 1 52 ASP 52 53 53 ASP ASP A . n A 1 53 PRO 53 54 54 PRO PRO A . n A 1 54 TRP 54 55 55 TRP TRP A . n A 1 55 LEU 55 56 56 LEU LEU A . n A 1 56 ALA 56 57 57 ALA ALA A . n A 1 57 PRO 57 58 58 PRO PRO A . n A 1 58 ALA 58 59 59 ALA ALA A . n A 1 59 ILE 59 60 60 ILE ILE A . n A 1 60 ASP 60 61 61 ASP ASP A . n A 1 61 TRP 61 62 62 TRP TRP A . n A 1 62 GLU 62 63 63 GLU GLU A . n A 1 63 ARG 63 64 64 ARG ARG A . n A 1 64 THR 64 65 65 THR THR A . n A 1 65 LEU 65 66 66 LEU LEU A . n A 1 66 ALA 66 67 67 ALA ALA A . n A 1 67 PHE 67 68 68 PHE PHE A . n A 1 68 ARG 68 69 69 ARG ARG A . n A 1 69 HIS 69 70 70 HIS HIS A . n A 1 70 ARG 70 71 71 ARG ARG A . n A 1 71 LEU 71 72 72 LEU LEU A . n A 1 72 TRP 72 73 73 TRP TRP A . n A 1 73 ASP 73 74 74 ASP ASP A . n A 1 74 LEU 74 75 75 LEU LEU A . n A 1 75 GLY 75 76 76 GLY GLY A . n A 1 76 LEU 76 77 77 LEU LEU A . n A 1 77 GLY 77 78 78 GLY GLY A . n A 1 78 VAL 78 79 79 VAL VAL A . n A 1 79 ALA 79 80 80 ALA ALA A . n A 1 80 GLU 80 81 81 GLU GLU A . n A 1 81 SER 81 82 82 SER SER A . n A 1 82 MSE 82 83 83 MSE MSE A . n A 1 83 ASP 83 84 84 ASP ASP A . n A 1 84 THR 84 85 85 THR THR A . n A 1 85 ALA 85 86 86 ALA ALA A . n A 1 86 GLN 86 87 87 GLN GLN A . n A 1 87 ARG 87 88 88 ARG ARG A . n A 1 88 GLY 88 89 89 GLY GLY A . n A 1 89 MSE 89 90 90 MSE MSE A . n A 1 90 GLY 90 91 91 GLY GLY A . n A 1 91 LEU 91 92 92 LEU LEU A . n A 1 92 GLY 92 93 93 GLY GLY A . n A 1 93 TRP 93 94 94 TRP TRP A . n A 1 94 PRO 94 95 95 PRO PRO A . n A 1 95 GLU 95 96 96 GLU GLU A . n A 1 96 ALA 96 97 97 ALA ALA A . n A 1 97 ARG 97 98 98 ARG ARG A . n A 1 98 GLU 98 99 99 GLU GLU A . n A 1 99 LEU 99 100 100 LEU LEU A . n A 1 100 ILE 100 101 101 ILE ILE A . n A 1 101 ARG 101 102 102 ARG ARG A . n A 1 102 ARG 102 103 103 ARG ARG A . n A 1 103 SER 103 104 104 SER SER A . n A 1 104 LEU 104 105 105 LEU LEU A . n A 1 105 ALA 105 106 106 ALA ALA A . n A 1 106 GLU 106 107 107 GLU GLU A . n A 1 107 ALA 107 108 108 ALA ALA A . n A 1 108 ARG 108 109 109 ARG ARG A . n A 1 109 GLY 109 110 110 GLY GLY A . n A 1 110 ARG 110 111 111 ARG ARG A . n A 1 111 PRO 111 112 112 PRO PRO A . n A 1 112 ASP 112 113 113 ASP ASP A . n A 1 113 ALA 113 114 114 ALA ALA A . n A 1 114 LEU 114 115 115 LEU LEU A . n A 1 115 ILE 115 116 116 ILE ILE A . n A 1 116 ALA 116 117 117 ALA ALA A . n A 1 117 CYS 117 118 118 CYS CYS A . n A 1 118 GLY 118 119 119 GLY GLY A . n A 1 119 ALA 119 120 120 ALA ALA A . n A 1 120 GLY 120 121 121 GLY GLY A . n A 1 121 THR 121 122 122 THR THR A . n A 1 122 ASP 122 123 123 ASP ASP A . n A 1 123 HIS 123 124 124 HIS HIS A . n A 1 124 LEU 124 125 125 LEU LEU A . n A 1 125 ALA 125 126 126 ALA ALA A . n A 1 126 PRO 126 127 127 PRO PRO A . n A 1 127 GLY 127 128 128 GLY GLY A . n A 1 128 PRO 128 129 129 PRO PRO A . n A 1 129 ASP 129 130 130 ASP ASP A . n A 1 130 VAL 130 131 131 VAL VAL A . n A 1 131 SER 131 132 132 SER SER A . n A 1 132 ILE 132 133 133 ILE ILE A . n A 1 133 ASP 133 134 134 ASP ASP A . n A 1 134 ASP 134 135 135 ASP ASP A . n A 1 135 ILE 135 136 136 ILE ILE A . n A 1 136 LEU 136 137 137 LEU LEU A . n A 1 137 ALA 137 138 138 ALA ALA A . n A 1 138 ALA 138 139 139 ALA ALA A . n A 1 139 TYR 139 140 140 TYR TYR A . n A 1 140 GLU 140 141 141 GLU GLU A . n A 1 141 SER 141 142 142 SER SER A . n A 1 142 GLN 142 143 143 GLN GLN A . n A 1 143 ILE 143 144 144 ILE ILE A . n A 1 144 GLU 144 145 145 GLU GLU A . n A 1 145 ALA 145 146 146 ALA ALA A . n A 1 146 ILE 146 147 147 ILE ILE A . n A 1 147 GLU 147 148 148 GLU GLU A . n A 1 148 ALA 148 149 149 ALA ALA A . n A 1 149 GLU 149 150 150 GLU GLU A . n A 1 150 GLY 150 151 151 GLY GLY A . n A 1 151 GLY 151 152 152 GLY GLY A . n A 1 152 ARG 152 153 153 ARG ARG A . n A 1 153 ILE 153 154 154 ILE ILE A . n A 1 154 ILE 154 155 155 ILE ILE A . n A 1 155 LEU 155 156 156 LEU LEU A . n A 1 156 MSE 156 157 157 MSE MSE A . n A 1 157 ALA 157 158 158 ALA ALA A . n A 1 158 SER 158 159 159 SER SER A . n A 1 159 ARG 159 160 160 ARG ARG A . n A 1 160 ALA 160 161 161 ALA ALA A . n A 1 161 LEU 161 162 162 LEU LEU A . n A 1 162 ALA 162 163 163 ALA ALA A . n A 1 163 ALA 163 164 164 ALA ALA A . n A 1 164 ALA 164 165 165 ALA ALA A . n A 1 165 ALA 165 166 166 ALA ALA A . n A 1 166 LYS 166 167 167 LYS LYS A . n A 1 167 GLY 167 168 168 GLY GLY A . n A 1 168 PRO 168 169 169 PRO PRO A . n A 1 169 GLU 169 170 170 GLU GLU A . n A 1 170 ASP 170 171 171 ASP ASP A . n A 1 171 TYR 171 172 172 TYR TYR A . n A 1 172 ILE 172 173 173 ILE ILE A . n A 1 173 ARG 173 174 174 ARG ARG A . n A 1 174 VAL 174 175 175 VAL VAL A . n A 1 175 TYR 175 176 176 TYR TYR A . n A 1 176 ASP 176 177 177 ASP ASP A . n A 1 177 ARG 177 178 178 ARG ARG A . n A 1 178 VAL 178 179 179 VAL VAL A . n A 1 179 LEU 179 180 180 LEU LEU A . n A 1 180 SER 180 181 181 SER SER A . n A 1 181 GLN 181 182 182 GLN GLN A . n A 1 182 VAL 182 183 183 VAL VAL A . n A 1 183 LYS 183 184 184 LYS LYS A . n A 1 184 GLU 184 185 185 GLU GLU A . n A 1 185 PRO 185 186 186 PRO PRO A . n A 1 186 VAL 186 187 187 VAL VAL A . n A 1 187 ILE 187 188 188 ILE ILE A . n A 1 188 ILE 188 189 189 ILE ILE A . n A 1 189 HIS 189 190 190 HIS HIS A . n A 1 190 TRP 190 191 191 TRP TRP A . n A 1 191 LEU 191 192 192 LEU LEU A . n A 1 192 GLY 192 193 193 GLY GLY A . n A 1 193 GLU 193 194 194 GLU GLU A . n A 1 194 MSE 194 195 195 MSE MSE A . n A 1 195 PHE 195 196 196 PHE PHE A . n A 1 196 ASP 196 197 197 ASP ASP A . n A 1 197 PRO 197 198 198 PRO PRO A . n A 1 198 ALA 198 199 199 ALA ALA A . n A 1 199 LEU 199 200 200 LEU LEU A . n A 1 200 GLU 200 201 201 GLU GLU A . n A 1 201 GLY 201 202 202 GLY GLY A . n A 1 202 TYR 202 203 203 TYR TYR A . n A 1 203 TRP 203 204 204 TRP TRP A . n A 1 204 GLY 204 205 205 GLY GLY A . n A 1 205 ASN 205 206 206 ASN ASN A . n A 1 206 ALA 206 207 207 ALA ALA A . n A 1 207 ASP 207 208 208 ASP ASP A . n A 1 208 HIS 208 209 209 HIS HIS A . n A 1 209 MSE 209 210 210 MSE MSE A . n A 1 210 ALA 210 211 211 ALA ALA A . n A 1 211 ALA 211 212 212 ALA ALA A . n A 1 212 MSE 212 213 213 MSE MSE A . n A 1 213 LYS 213 214 214 LYS LYS A . n A 1 214 THR 214 215 215 THR THR A . n A 1 215 CYS 215 216 216 CYS CYS A . n A 1 216 LEU 216 217 217 LEU LEU A . n A 1 217 ASP 217 218 218 ASP ASP A . n A 1 218 VAL 218 219 219 VAL VAL A . n A 1 219 LEU 219 220 220 LEU LEU A . n A 1 220 GLU 220 221 221 GLU GLU A . n A 1 221 ALA 221 222 222 ALA ALA A . n A 1 222 HIS 222 223 223 HIS HIS A . n A 1 223 ALA 223 224 224 ALA ALA A . n A 1 224 ALA 224 225 225 ALA ALA A . n A 1 225 LYS 225 226 226 LYS LYS A . n A 1 226 VAL 226 227 227 VAL VAL A . n A 1 227 ASP 227 228 228 ASP ASP A . n A 1 228 GLY 228 229 229 GLY GLY A . n A 1 229 ILE 229 230 230 ILE ILE A . n A 1 230 LYS 230 231 231 LYS LYS A . n A 1 231 ILE 231 232 232 ILE ILE A . n A 1 232 SER 232 233 233 SER SER A . n A 1 233 LEU 233 234 234 LEU LEU A . n A 1 234 LEU 234 235 235 LEU LEU A . n A 1 235 SER 235 236 236 SER SER A . n A 1 236 LYS 236 237 237 LYS LYS A . n A 1 237 GLU 237 238 238 GLU GLU A . n A 1 238 LYS 238 239 239 LYS LYS A . n A 1 239 GLU 239 240 240 GLU GLU A . n A 1 240 ILE 240 241 241 ILE ILE A . n A 1 241 VAL 241 242 242 VAL VAL A . n A 1 242 MSE 242 243 243 MSE MSE A . n A 1 243 ARG 243 244 244 ARG ARG A . n A 1 244 ARG 244 245 245 ARG ARG A . n A 1 245 GLN 245 246 246 GLN GLN A . n A 1 246 LEU 246 247 247 LEU LEU A . n A 1 247 PRO 247 248 248 PRO PRO A . n A 1 248 LYS 248 249 249 LYS LYS A . n A 1 249 GLY 249 250 250 GLY GLY A . n A 1 250 VAL 250 251 251 VAL VAL A . n A 1 251 ARG 251 252 252 ARG ARG A . n A 1 252 MSE 252 253 253 MSE MSE A . n A 1 253 TYR 253 254 254 TYR TYR A . n A 1 254 THR 254 255 255 THR THR A . n A 1 255 GLY 255 256 256 GLY GLY A . n A 1 256 ASP 256 257 257 ASP ASP A . n A 1 257 ASP 257 258 258 ASP ASP A . n A 1 258 PHE 258 259 259 PHE PHE A . n A 1 259 ASN 259 260 260 ASN ASN A . n A 1 260 TYR 260 261 261 TYR TYR A . n A 1 261 ALA 261 262 262 ALA ALA A . n A 1 262 GLU 262 263 263 GLU GLU A . n A 1 263 LEU 263 264 264 LEU LEU A . n A 1 264 ILE 264 265 265 ILE ILE A . n A 1 265 ALA 265 266 266 ALA ALA A . n A 1 266 GLY 266 267 267 GLY GLY A . n A 1 267 ASP 267 268 268 ASP ASP A . n A 1 268 GLU 268 269 269 GLU GLU A . n A 1 269 GLU 269 270 270 GLU GLU A . n A 1 270 GLY 270 271 271 GLY GLY A . n A 1 271 HIS 271 272 272 HIS HIS A . n A 1 272 SER 272 273 273 SER SER A . n A 1 273 ASP 273 274 274 ASP ASP A . n A 1 274 ALA 274 275 275 ALA ALA A . n A 1 275 LEU 275 276 276 LEU LEU A . n A 1 276 LEU 276 277 277 LEU LEU A . n A 1 277 GLY 277 278 278 GLY GLY A . n A 1 278 ILE 278 279 279 ILE ILE A . n A 1 279 PHE 279 280 280 PHE PHE A . n A 1 280 ASP 280 281 281 ASP ASP A . n A 1 281 ALA 281 282 282 ALA ALA A . n A 1 282 ILE 282 283 283 ILE ILE A . n A 1 283 ALA 283 284 284 ALA ALA A . n A 1 284 PRO 284 285 285 PRO PRO A . n A 1 285 VAL 285 286 286 VAL VAL A . n A 1 286 ALA 286 287 287 ALA ALA A . n A 1 287 SER 287 288 288 SER SER A . n A 1 288 ALA 288 289 289 ALA ALA A . n A 1 289 ALA 289 290 290 ALA ALA A . n A 1 290 LEU 290 291 291 LEU LEU A . n A 1 291 GLU 291 292 292 GLU GLU A . n A 1 292 ALA 292 293 293 ALA ALA A . n A 1 293 LEU 293 294 294 LEU LEU A . n A 1 294 GLY 294 295 295 GLY GLY A . n A 1 295 SER 295 296 296 SER SER A . n A 1 296 GLY 296 297 297 GLY GLY A . n A 1 297 ARG 297 298 298 ARG ARG A . n A 1 298 ASN 298 299 299 ASN ASN A . n A 1 299 GLY 299 300 300 GLY GLY A . n A 1 300 GLU 300 301 301 GLU GLU A . n A 1 301 PHE 301 302 302 PHE PHE A . n A 1 302 PHE 302 303 303 PHE PHE A . n A 1 303 GLU 303 304 304 GLU GLU A . n A 1 304 LEU 304 305 305 LEU LEU A . n A 1 305 LEU 305 306 306 LEU LEU A . n A 1 306 GLU 306 307 307 GLU GLU A . n A 1 307 PRO 307 308 308 PRO PRO A . n A 1 308 THR 308 309 309 THR THR A . n A 1 309 VAL 309 310 310 VAL VAL A . n A 1 310 PRO 310 311 311 PRO PRO A . n A 1 311 LEU 311 312 312 LEU LEU A . n A 1 312 SER 312 313 313 SER SER A . n A 1 313 ARG 313 314 314 ARG ARG A . n A 1 314 HIS 314 315 315 HIS HIS A . n A 1 315 ILE 315 316 316 ILE ILE A . n A 1 316 PHE 316 317 317 PHE PHE A . n A 1 317 LYS 317 318 318 LYS LYS A . n A 1 318 ALA 318 319 319 ALA ALA A . n A 1 319 PRO 319 320 320 PRO PRO A . n A 1 320 THR 320 321 321 THR THR A . n A 1 321 ARG 321 322 322 ARG ARG A . n A 1 322 PHE 322 323 323 PHE PHE A . n A 1 323 TYR 323 324 324 TYR TYR A . n A 1 324 LYS 324 325 325 LYS LYS A . n A 1 325 THR 325 326 326 THR THR A . n A 1 326 GLY 326 327 327 GLY GLY A . n A 1 327 VAL 327 328 328 VAL VAL A . n A 1 328 VAL 328 329 329 VAL VAL A . n A 1 329 PHE 329 330 330 PHE PHE A . n A 1 330 LEU 330 331 331 LEU LEU A . n A 1 331 ALA 331 332 332 ALA ALA A . n A 1 332 TYR 332 333 333 TYR TYR A . n A 1 333 LEU 333 334 334 LEU LEU A . n A 1 334 ASN 334 335 335 ASN ASN A . n A 1 335 GLY 335 336 336 GLY GLY A . n A 1 336 LEU 336 337 337 LEU LEU A . n A 1 337 GLN 337 338 338 GLN GLN A . n A 1 338 ASP 338 339 339 ASP ASP A . n A 1 339 HIS 339 340 340 HIS HIS A . n A 1 340 PHE 340 341 341 PHE PHE A . n A 1 341 VAL 341 342 342 VAL VAL A . n A 1 342 MSE 342 343 343 MSE MSE A . n A 1 343 ILE 343 344 344 ILE ILE A . n A 1 344 GLY 344 345 345 GLY GLY A . n A 1 345 GLY 345 346 346 GLY GLY A . n A 1 346 GLN 346 347 347 GLN GLN A . n A 1 347 GLN 347 348 348 GLN GLN A . n A 1 348 SER 348 349 349 SER SER A . n A 1 349 ALA 349 350 350 ALA ALA A . n A 1 350 ARG 350 351 351 ARG ARG A . n A 1 351 SER 351 352 352 SER SER A . n A 1 352 LEU 352 353 353 LEU LEU A . n A 1 353 VAL 353 354 354 VAL VAL A . n A 1 354 HIS 354 355 355 HIS HIS A . n A 1 355 LEU 355 356 356 LEU LEU A . n A 1 356 ALA 356 357 357 ALA ALA A . n A 1 357 GLU 357 358 358 GLU GLU A . n A 1 358 LEU 358 359 359 LEU LEU A . n A 1 359 PHE 359 360 360 PHE PHE A . n A 1 360 ARG 360 361 361 ARG ARG A . n A 1 361 LEU 361 362 362 LEU LEU A . n A 1 362 ALA 362 363 363 ALA ALA A . n A 1 363 ASP 363 364 364 ASP ASP A . n A 1 364 LYS 364 365 365 LYS LYS A . n A 1 365 ALA 365 366 366 ALA ALA A . n A 1 366 GLY 366 367 367 GLY GLY A . n A 1 367 ALA 367 368 368 ALA ALA A . n A 1 368 LEU 368 369 369 LEU LEU A . n A 1 369 ALA 369 370 370 ALA ALA A . n A 1 370 ASP 370 371 371 ASP ASP A . n A 1 371 PRO 371 372 372 PRO PRO A . n A 1 372 GLU 372 373 373 GLU GLU A . n A 1 373 LEU 373 374 374 LEU LEU A . n A 1 374 ALA 374 375 375 ALA ALA A . n A 1 375 THR 375 376 376 THR THR A . n A 1 376 ALA 376 377 377 ALA ALA A . n A 1 377 ARG 377 378 378 ARG ARG A . n A 1 378 MSE 378 379 379 MSE MSE A . n A 1 379 ARG 379 380 380 ARG ARG A . n A 1 380 ARG 380 381 381 ARG ARG A . n A 1 381 VAL 381 382 382 VAL VAL A . n A 1 382 LEU 382 383 383 LEU LEU A . n A 1 383 ALA 383 384 384 ALA ALA A . n A 1 384 MSE 384 385 385 MSE MSE A . n A 1 385 HIS 385 386 386 HIS HIS A . n A 1 386 GLY 386 387 387 GLY GLY A . n A 1 387 VAL 387 388 388 VAL VAL A . n A 1 388 GLU 388 389 ? ? ? A . n A 1 389 GLU 389 390 ? ? ? A . n A 1 390 GLY 390 391 ? ? ? A . n A 1 391 HIS 391 392 ? ? ? A . n A 1 392 HIS 392 393 ? ? ? A . n A 1 393 HIS 393 394 ? ? ? A . n A 1 394 HIS 394 395 ? ? ? A . n A 1 395 HIS 395 396 ? ? ? A . n A 1 396 HIS 396 397 ? ? ? A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name PSI:Biology _pdbx_SG_project.full_name_of_center 'New York Structural Genomics Research Consortium' _pdbx_SG_project.initial_of_center NYSGRC # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 82 A MSE 83 ? MET SELENOMETHIONINE 2 A MSE 89 A MSE 90 ? MET SELENOMETHIONINE 3 A MSE 156 A MSE 157 ? MET SELENOMETHIONINE 4 A MSE 194 A MSE 195 ? MET SELENOMETHIONINE 5 A MSE 209 A MSE 210 ? MET SELENOMETHIONINE 6 A MSE 212 A MSE 213 ? MET SELENOMETHIONINE 7 A MSE 242 A MSE 243 ? MET SELENOMETHIONINE 8 A MSE 252 A MSE 253 ? MET SELENOMETHIONINE 9 A MSE 342 A MSE 343 ? MET SELENOMETHIONINE 10 A MSE 378 A MSE 379 ? MET SELENOMETHIONINE 11 A MSE 384 A MSE 385 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2012-03-28 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # _diffrn_reflns.diffrn_id 1 _diffrn_reflns.pdbx_d_res_high 2.600 _diffrn_reflns.pdbx_d_res_low 50.000 _diffrn_reflns.pdbx_number_obs 27266 _diffrn_reflns.pdbx_Rmerge_I_obs 0.121 _diffrn_reflns.pdbx_Rsym_value ? _diffrn_reflns.pdbx_chi_squared 1.33 _diffrn_reflns.av_sigmaI_over_netI 13.64 _diffrn_reflns.pdbx_redundancy 3.80 _diffrn_reflns.pdbx_percent_possible_obs 99.90 _diffrn_reflns.number 104452 _diffrn_reflns.pdbx_observed_criterion ? _diffrn_reflns.limit_h_max ? _diffrn_reflns.limit_h_min ? _diffrn_reflns.limit_k_max ? _diffrn_reflns.limit_k_min ? _diffrn_reflns.limit_l_max ? _diffrn_reflns.limit_l_min ? # _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x 40.5371 _pdbx_refine_tls.origin_y 7.9860 _pdbx_refine_tls.origin_z 4.3952 _pdbx_refine_tls.T[1][1] 0.2541 _pdbx_refine_tls.T[2][2] 0.0980 _pdbx_refine_tls.T[3][3] 0.1603 _pdbx_refine_tls.T[1][2] -0.1543 _pdbx_refine_tls.T[1][3] -0.0388 _pdbx_refine_tls.T[2][3] 0.0409 _pdbx_refine_tls.L[1][1] 1.0063 _pdbx_refine_tls.L[2][2] 1.9578 _pdbx_refine_tls.L[3][3] 1.5359 _pdbx_refine_tls.L[1][2] -0.3012 _pdbx_refine_tls.L[1][3] -0.1017 _pdbx_refine_tls.L[2][3] -0.0025 _pdbx_refine_tls.S[1][1] -0.1931 _pdbx_refine_tls.S[2][2] 0.2276 _pdbx_refine_tls.S[3][3] -0.0345 _pdbx_refine_tls.S[1][2] 0.1279 _pdbx_refine_tls.S[1][3] 0.0290 _pdbx_refine_tls.S[2][3] 0.2640 _pdbx_refine_tls.S[2][1] -0.2750 _pdbx_refine_tls.S[3][1] 0.0011 _pdbx_refine_tls.S[3][2] -0.0352 # _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_auth_asym_id A _pdbx_refine_tls_group.beg_auth_seq_id 3 _pdbx_refine_tls_group.end_auth_asym_id A _pdbx_refine_tls_group.end_auth_seq_id 501 _pdbx_refine_tls_group.selection_details ? _pdbx_refine_tls_group.beg_label_asym_id . _pdbx_refine_tls_group.beg_label_seq_id . _pdbx_refine_tls_group.end_label_asym_id . _pdbx_refine_tls_group.end_label_seq_id . _pdbx_refine_tls_group.selection ? # _pdbx_phasing_MR.entry_id 4DNH _pdbx_phasing_MR.method_rotation ? _pdbx_phasing_MR.method_translation ? _pdbx_phasing_MR.model_details 'Phaser MODE: MR_AUTO' _pdbx_phasing_MR.R_factor 53.990 _pdbx_phasing_MR.R_rigid_body ? _pdbx_phasing_MR.correlation_coeff_Fo_to_Fc ? _pdbx_phasing_MR.correlation_coeff_Io_to_Ic ? _pdbx_phasing_MR.d_res_high_rotation 2.500 _pdbx_phasing_MR.d_res_low_rotation 41.200 _pdbx_phasing_MR.d_res_high_translation 2.500 _pdbx_phasing_MR.d_res_low_translation 41.200 _pdbx_phasing_MR.packing ? _pdbx_phasing_MR.reflns_percent_rotation ? _pdbx_phasing_MR.reflns_percent_translation ? _pdbx_phasing_MR.sigma_F_rotation ? _pdbx_phasing_MR.sigma_F_translation ? _pdbx_phasing_MR.sigma_I_rotation ? _pdbx_phasing_MR.sigma_I_translation ? # _phasing.method MR # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 SCALEPACK . ? program 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data scaling' http://www.hkl-xray.com/ ? ? 2 SHELX . ? package 'George M. Sheldrick' gsheldr@shelx.uni-ac.gwdg.de phasing http://shelx.uni-ac.gwdg.de/SHELX/ Fortran_77 ? 3 REFMAC . ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 4 PDB_EXTRACT 3.10 'June 10, 2010' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 5 SHELXD . ? ? ? ? phasing ? ? ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 MSE A 90 ? ? -140.01 52.63 2 1 ASP A 113 ? ? -119.99 60.54 3 1 ASP A 123 ? ? -49.79 -10.82 4 1 ASP A 130 ? ? -148.25 24.54 5 1 TRP A 204 ? ? 83.93 -7.58 6 1 ASP A 268 ? ? -115.23 -166.15 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ARG 22 ? NE ? A ARG 21 NE 2 1 Y 1 A ARG 22 ? CZ ? A ARG 21 CZ 3 1 Y 1 A ARG 22 ? NH1 ? A ARG 21 NH1 4 1 Y 1 A ARG 22 ? NH2 ? A ARG 21 NH2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A SER 2 ? A SER 1 2 1 Y 1 A GLU 389 ? A GLU 388 3 1 Y 1 A GLU 390 ? A GLU 389 4 1 Y 1 A GLY 391 ? A GLY 390 5 1 Y 1 A HIS 392 ? A HIS 391 6 1 Y 1 A HIS 393 ? A HIS 392 7 1 Y 1 A HIS 394 ? A HIS 393 8 1 Y 1 A HIS 395 ? A HIS 394 9 1 Y 1 A HIS 396 ? A HIS 395 10 1 Y 1 A HIS 397 ? A HIS 396 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 GLYCEROL GOL 3 water HOH # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GOL 1 500 500 GOL GOL A . C 2 GOL 1 501 501 GOL GOL A . D 3 HOH 1 601 32 HOH HOH A . D 3 HOH 2 602 34 HOH HOH A . D 3 HOH 3 603 35 HOH HOH A . D 3 HOH 4 604 36 HOH HOH A . D 3 HOH 5 605 40 HOH HOH A . D 3 HOH 6 606 45 HOH HOH A . D 3 HOH 7 607 48 HOH HOH A . D 3 HOH 8 608 51 HOH HOH A . D 3 HOH 9 609 54 HOH HOH A . D 3 HOH 10 610 55 HOH HOH A . D 3 HOH 11 611 57 HOH HOH A . D 3 HOH 12 612 58 HOH HOH A . D 3 HOH 13 613 59 HOH HOH A . D 3 HOH 14 614 61 HOH HOH A . D 3 HOH 15 615 63 HOH HOH A . D 3 HOH 16 616 66 HOH HOH A . D 3 HOH 17 617 69 HOH HOH A . D 3 HOH 18 618 70 HOH HOH A . D 3 HOH 19 619 73 HOH HOH A . D 3 HOH 20 620 76 HOH HOH A . D 3 HOH 21 621 77 HOH HOH A . D 3 HOH 22 622 78 HOH HOH A . D 3 HOH 23 623 79 HOH HOH A . D 3 HOH 24 624 82 HOH HOH A . D 3 HOH 25 625 85 HOH HOH A . D 3 HOH 26 626 86 HOH HOH A . D 3 HOH 27 627 88 HOH HOH A . D 3 HOH 28 628 89 HOH HOH A . D 3 HOH 29 629 90 HOH HOH A . D 3 HOH 30 630 92 HOH HOH A . D 3 HOH 31 631 93 HOH HOH A . D 3 HOH 32 632 95 HOH HOH A . D 3 HOH 33 633 96 HOH HOH A . D 3 HOH 34 634 97 HOH HOH A . D 3 HOH 35 635 98 HOH HOH A . D 3 HOH 36 636 99 HOH HOH A . D 3 HOH 37 637 100 HOH HOH A . D 3 HOH 38 638 101 HOH HOH A . D 3 HOH 39 639 102 HOH HOH A . D 3 HOH 40 640 103 HOH HOH A . D 3 HOH 41 641 104 HOH HOH A . D 3 HOH 42 642 105 HOH HOH A . D 3 HOH 43 643 106 HOH HOH A . D 3 HOH 44 644 107 HOH HOH A . D 3 HOH 45 645 108 HOH HOH A . D 3 HOH 46 646 109 HOH HOH A . D 3 HOH 47 647 110 HOH HOH A . D 3 HOH 48 648 111 HOH HOH A . D 3 HOH 49 649 112 HOH HOH A . D 3 HOH 50 650 113 HOH HOH A . D 3 HOH 51 651 114 HOH HOH A . D 3 HOH 52 652 115 HOH HOH A . D 3 HOH 53 653 116 HOH HOH A . D 3 HOH 54 654 117 HOH HOH A . D 3 HOH 55 655 118 HOH HOH A . D 3 HOH 56 656 119 HOH HOH A . D 3 HOH 57 657 120 HOH HOH A . D 3 HOH 58 658 121 HOH HOH A . D 3 HOH 59 659 122 HOH HOH A . D 3 HOH 60 660 123 HOH HOH A . D 3 HOH 61 661 124 HOH HOH A . D 3 HOH 62 662 125 HOH HOH A . D 3 HOH 63 663 127 HOH HOH A . D 3 HOH 64 664 128 HOH HOH A . D 3 HOH 65 665 129 HOH HOH A . D 3 HOH 66 666 130 HOH HOH A . D 3 HOH 67 667 131 HOH HOH A . D 3 HOH 68 668 132 HOH HOH A . D 3 HOH 69 669 133 HOH HOH A . D 3 HOH 70 670 134 HOH HOH A . D 3 HOH 71 671 135 HOH HOH A . D 3 HOH 72 672 136 HOH HOH A . D 3 HOH 73 673 137 HOH HOH A . D 3 HOH 74 674 138 HOH HOH A . D 3 HOH 75 675 139 HOH HOH A . D 3 HOH 76 676 140 HOH HOH A . D 3 HOH 77 677 141 HOH HOH A . D 3 HOH 78 678 142 HOH HOH A . D 3 HOH 79 679 144 HOH HOH A . D 3 HOH 80 680 145 HOH HOH A . D 3 HOH 81 681 146 HOH HOH A . D 3 HOH 82 682 147 HOH HOH A . D 3 HOH 83 683 148 HOH HOH A . D 3 HOH 84 684 149 HOH HOH A . D 3 HOH 85 685 150 HOH HOH A . D 3 HOH 86 686 151 HOH HOH A . D 3 HOH 87 687 152 HOH HOH A . D 3 HOH 88 688 153 HOH HOH A . D 3 HOH 89 689 154 HOH HOH A . D 3 HOH 90 690 155 HOH HOH A . D 3 HOH 91 691 156 HOH HOH A . D 3 HOH 92 692 157 HOH HOH A . D 3 HOH 93 693 158 HOH HOH A . D 3 HOH 94 694 159 HOH HOH A . D 3 HOH 95 695 160 HOH HOH A . #