HEADER HYDROLASE 08-FEB-12 4DNM TITLE CRYSTAL STRUCTURE OF AN AMIDOHYDROLASE (COG3618) FROM BURKHOLDERIA TITLE 2 MULTIVORANS (TARGET EFI-500235) WITH BOUND HEPES, SPACE GROUP P3221 COMPND MOL_ID: 1; COMPND 2 MOLECULE: AMIDOHYDROLASE 2; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: PUTATIVE AMIDOHYDROLASE; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BURKHOLDERIA MULTIVORANS; SOURCE 3 ORGANISM_TAXID: 395019; SOURCE 4 STRAIN: ATCC 17616; SOURCE 5 GENE: BMUL_3602, BMULJ_04915; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET KEYWDS AMIDOHYDROLASE, ENZYME FUNCTION INITIATIVE, EFI, STRUCTURAL GENOMICS, KEYWDS 2 HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR M.W.VETTING,R.TORO,R.BHOSLE,R.D.SEIDEL,B.HILLERICH,E.WASHINGTON, AUTHOR 2 A.SCOTT GLENN,S.CHOWDHURY,B.EVANS,J.HAMMONDS,N.F.AL OBAIDI, AUTHOR 3 W.D.ZENCHECK,H.J.IMKER,J.A.GERLT,F.M.RAUSHEL,S.C.ALMO,ENZYME AUTHOR 4 FUNCTION INITIATIVE (EFI) REVDAT 3 28-FEB-24 4DNM 1 REMARK SEQADV LINK REVDAT 2 31-JAN-18 4DNM 1 AUTHOR JRNL REVDAT 1 29-FEB-12 4DNM 0 JRNL AUTH M.W.VETTING,R.TORO,R.BHOSLE,R.D.SEIDEL,B.HILLERICH, JRNL AUTH 2 E.WASHINGTON,A.SCOTT GLENN,S.CHOWDHURY,B.EVANS,J.HAMMONDS, JRNL AUTH 3 N.F.AL OBAIDI,W.D.ZENCHECK,H.J.IMKER,J.A.GERLT,F.M.RAUSHEL, JRNL AUTH 4 S.C.ALMO,ENZYME FUNCTION INITIATIVE (EFI) JRNL TITL CRYSTAL STRUCTURE OF AN AMIDOHYDROLASE (COG3618) FROM JRNL TITL 2 BURKHOLDERIA MULTIVORANS (TARGET EFI-500235) WITH BOUND JRNL TITL 3 HEPES, SPACE GROUP P3221 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.15 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.7.3_928 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.15 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.99 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 25899 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.192 REMARK 3 R VALUE (WORKING SET) : 0.190 REMARK 3 FREE R VALUE : 0.228 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.920 REMARK 3 FREE R VALUE TEST SET COUNT : 1273 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 48.0000 - 4.4711 1.00 2916 141 0.1737 0.1691 REMARK 3 2 4.4711 - 3.5492 1.00 2762 160 0.1573 0.2110 REMARK 3 3 3.5492 - 3.1007 1.00 2728 145 0.1837 0.2114 REMARK 3 4 3.1007 - 2.8172 1.00 2739 150 0.1936 0.2656 REMARK 3 5 2.8172 - 2.6153 1.00 2716 139 0.2167 0.2610 REMARK 3 6 2.6153 - 2.4611 1.00 2718 123 0.2105 0.2788 REMARK 3 7 2.4611 - 2.3379 1.00 2679 151 0.2150 0.2464 REMARK 3 8 2.3379 - 2.2361 1.00 2712 130 0.2272 0.2777 REMARK 3 9 2.2361 - 2.1500 1.00 2656 134 0.2528 0.2890 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.00 REMARK 3 SHRINKAGE RADIUS : 0.73 REMARK 3 K_SOL : 0.34 REMARK 3 B_SOL : 31.72 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.260 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 20.970 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 25.57 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 31.66 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.20770 REMARK 3 B22 (A**2) : 1.20770 REMARK 3 B33 (A**2) : -2.41540 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.010 2392 REMARK 3 ANGLE : 1.110 3252 REMARK 3 CHIRALITY : 0.074 339 REMARK 3 PLANARITY : 0.004 426 REMARK 3 DIHEDRAL : 15.461 857 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 11 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 3:59) REMARK 3 ORIGIN FOR THE GROUP (A): -1.9819 38.8027 6.3118 REMARK 3 T TENSOR REMARK 3 T11: 0.2758 T22: 0.1103 REMARK 3 T33: 0.1242 T12: -0.2618 REMARK 3 T13: -0.0495 T23: -0.0095 REMARK 3 L TENSOR REMARK 3 L11: 0.7833 L22: 1.4967 REMARK 3 L33: 0.3463 L12: 0.3838 REMARK 3 L13: 0.1042 L23: 0.2446 REMARK 3 S TENSOR REMARK 3 S11: 0.0204 S12: -0.0318 S13: -0.0768 REMARK 3 S21: 0.1312 S22: -0.0108 S23: -0.2048 REMARK 3 S31: -0.0117 S32: 0.0602 S33: -0.0319 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 60:97) REMARK 3 ORIGIN FOR THE GROUP (A): -9.2293 48.3454 16.8519 REMARK 3 T TENSOR REMARK 3 T11: 0.4491 T22: 0.2032 REMARK 3 T33: 0.1314 T12: -0.1981 REMARK 3 T13: 0.1189 T23: -0.0880 REMARK 3 L TENSOR REMARK 3 L11: 0.8904 L22: 1.4898 REMARK 3 L33: 1.3826 L12: 0.8191 REMARK 3 L13: 1.0312 L23: 0.5766 REMARK 3 S TENSOR REMARK 3 S11: 0.1220 S12: -0.2404 S13: 0.1388 REMARK 3 S21: 0.3687 S22: -0.1514 S23: 0.2094 REMARK 3 S31: -0.0505 S32: -0.0965 S33: 0.0844 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 98:121) REMARK 3 ORIGIN FOR THE GROUP (A): -16.4864 51.3813 5.9297 REMARK 3 T TENSOR REMARK 3 T11: 0.3263 T22: 0.1689 REMARK 3 T33: 0.1771 T12: -0.1762 REMARK 3 T13: 0.0752 T23: -0.0353 REMARK 3 L TENSOR REMARK 3 L11: 2.4871 L22: 3.2384 REMARK 3 L33: 0.4318 L12: 1.3445 REMARK 3 L13: 0.4998 L23: 0.4684 REMARK 3 S TENSOR REMARK 3 S11: -0.1241 S12: 0.1196 S13: 0.2392 REMARK 3 S21: -0.1577 S22: 0.0807 S23: 0.3357 REMARK 3 S31: -0.0487 S32: -0.0401 S33: 0.1043 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 122:156) REMARK 3 ORIGIN FOR THE GROUP (A): -16.5043 56.9053 3.1356 REMARK 3 T TENSOR REMARK 3 T11: 0.2875 T22: 0.1188 REMARK 3 T33: 0.2601 T12: -0.1513 REMARK 3 T13: 0.0962 T23: -0.0403 REMARK 3 L TENSOR REMARK 3 L11: 1.9701 L22: 3.1649 REMARK 3 L33: 1.7141 L12: 1.2082 REMARK 3 L13: 0.7583 L23: 0.7943 REMARK 3 S TENSOR REMARK 3 S11: 0.0442 S12: -0.0895 S13: 0.2072 REMARK 3 S21: 0.2189 S22: -0.0463 S23: 0.4695 REMARK 3 S31: -0.0784 S32: -0.0846 S33: 0.0894 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 157:180) REMARK 3 ORIGIN FOR THE GROUP (A): -10.4169 50.7532 -8.7182 REMARK 3 T TENSOR REMARK 3 T11: 0.1704 T22: 0.0885 REMARK 3 T33: 0.1218 T12: -0.1452 REMARK 3 T13: -0.0022 T23: -0.0104 REMARK 3 L TENSOR REMARK 3 L11: 1.3194 L22: 2.6911 REMARK 3 L33: 1.8928 L12: 0.0665 REMARK 3 L13: -0.7669 L23: 0.6110 REMARK 3 S TENSOR REMARK 3 S11: -0.0766 S12: 0.1410 S13: -0.1549 REMARK 3 S21: -0.1460 S22: -0.0441 S23: 0.3076 REMARK 3 S31: 0.0271 S32: -0.1112 S33: 0.1788 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 181:202) REMARK 3 ORIGIN FOR THE GROUP (A): -9.5344 56.9431 -10.0458 REMARK 3 T TENSOR REMARK 3 T11: 0.2140 T22: 0.1071 REMARK 3 T33: 0.1793 T12: -0.1622 REMARK 3 T13: 0.0048 T23: 0.0014 REMARK 3 L TENSOR REMARK 3 L11: 1.0339 L22: 3.2044 REMARK 3 L33: 0.7257 L12: 0.4032 REMARK 3 L13: 0.3460 L23: 1.1727 REMARK 3 S TENSOR REMARK 3 S11: -0.1334 S12: 0.1454 S13: 0.0466 REMARK 3 S21: -0.2866 S22: 0.0547 S23: 0.2148 REMARK 3 S31: -0.0994 S32: -0.0065 S33: 0.0912 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 203:216) REMARK 3 ORIGIN FOR THE GROUP (A): -5.5862 36.4986 -11.3017 REMARK 3 T TENSOR REMARK 3 T11: 0.2198 T22: 0.1377 REMARK 3 T33: 0.1113 T12: -0.1180 REMARK 3 T13: -0.0093 T23: -0.0525 REMARK 3 L TENSOR REMARK 3 L11: 5.1390 L22: 3.6362 REMARK 3 L33: 3.8226 L12: -1.1648 REMARK 3 L13: -1.0597 L23: -1.0577 REMARK 3 S TENSOR REMARK 3 S11: 0.0579 S12: 0.3733 S13: -0.5813 REMARK 3 S21: -0.4659 S22: -0.0339 S23: 0.2301 REMARK 3 S31: 0.2677 S32: -0.1719 S33: -0.0294 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 217:234) REMARK 3 ORIGIN FOR THE GROUP (A): -1.2216 49.9635 -15.5970 REMARK 3 T TENSOR REMARK 3 T11: 0.3184 T22: 0.2383 REMARK 3 T33: 0.1356 T12: -0.1817 REMARK 3 T13: 0.0495 T23: -0.0287 REMARK 3 L TENSOR REMARK 3 L11: 0.4183 L22: 7.0860 REMARK 3 L33: 1.3147 L12: 0.6912 REMARK 3 L13: 0.2074 L23: 2.2589 REMARK 3 S TENSOR REMARK 3 S11: -0.1063 S12: 0.1335 S13: -0.0262 REMARK 3 S21: -0.4131 S22: 0.2055 S23: -0.3275 REMARK 3 S31: -0.0144 S32: 0.0507 S33: -0.0899 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 235:253) REMARK 3 ORIGIN FOR THE GROUP (A): 0.0559 45.8351 -2.6207 REMARK 3 T TENSOR REMARK 3 T11: 0.2198 T22: 0.1267 REMARK 3 T33: 0.1561 T12: -0.1769 REMARK 3 T13: 0.0134 T23: -0.0485 REMARK 3 L TENSOR REMARK 3 L11: 0.4903 L22: 0.1602 REMARK 3 L33: 0.1626 L12: -0.2786 REMARK 3 L13: 0.2299 L23: -0.1216 REMARK 3 S TENSOR REMARK 3 S11: 0.0136 S12: -0.0076 S13: 0.0191 REMARK 3 S21: 0.0180 S22: 0.0134 S23: -0.1370 REMARK 3 S31: -0.0155 S32: 0.0124 S33: 0.0318 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 254:268) REMARK 3 ORIGIN FOR THE GROUP (A): 7.7170 46.2252 -9.4698 REMARK 3 T TENSOR REMARK 3 T11: 0.2125 T22: 0.2412 REMARK 3 T33: 0.2376 T12: -0.1566 REMARK 3 T13: 0.0644 T23: -0.0457 REMARK 3 L TENSOR REMARK 3 L11: 1.0845 L22: 5.0573 REMARK 3 L33: 6.8772 L12: 0.4246 REMARK 3 L13: -0.8873 L23: -5.8323 REMARK 3 S TENSOR REMARK 3 S11: -0.1684 S12: 0.1479 S13: -0.0986 REMARK 3 S21: -0.3609 S22: -0.1489 S23: -0.8091 REMARK 3 S31: 0.1134 S32: 0.2457 S33: 0.3541 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 269:289) REMARK 3 ORIGIN FOR THE GROUP (A): 5.8243 57.2962 0.0317 REMARK 3 T TENSOR REMARK 3 T11: 0.2327 T22: 0.1569 REMARK 3 T33: 0.2076 T12: -0.1906 REMARK 3 T13: -0.0352 T23: -0.0355 REMARK 3 L TENSOR REMARK 3 L11: 2.3409 L22: 2.4962 REMARK 3 L33: 0.6915 L12: 1.1972 REMARK 3 L13: -0.3786 L23: 0.0541 REMARK 3 S TENSOR REMARK 3 S11: 0.0700 S12: -0.1006 S13: 0.0036 REMARK 3 S21: 0.0926 S22: -0.0271 S23: -0.1084 REMARK 3 S31: -0.0816 S32: 0.1056 S33: -0.0499 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4DNM COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 09-FEB-12. REMARK 100 THE DEPOSITION ID IS D_1000070553. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-OCT-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X29A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9793 REMARK 200 MONOCHROMATOR : GRAPHITE REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 35866 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.930 REMARK 200 RESOLUTION RANGE LOW (A) : NULL REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 11.40 REMARK 200 R MERGE (I) : 0.12400 REMARK 200 R SYM (I) : 0.12400 REMARK 200 FOR THE DATA SET : 13.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.93 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.03 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 11.30 REMARK 200 R MERGE FOR SHELL (I) : 1.98400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 63.90 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.41 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PROTEIN (10 MM HEPES, PH 7.8, 150 MM REMARK 280 NACL, 10% GLYCEROL, 0.5 MM ZNCL, 0.5 MM FUCONATE 1,4-LACTONE; REMARK 280 RESERVOIR (20% PEG3350, 100 MM HEPES PH 7.5, 9 MM TCEP); REMARK 280 CRYOPROTECTION (RESERVOIR, + 20% GLYCEROL), SITTING DROP VAPOR REMARK 280 DIFFUCTION, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 94.84000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 47.42000 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 47.42000 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 94.84000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLY A 2 REMARK 465 GLU A 290 REMARK 465 PRO A 291 REMARK 465 ALA A 292 REMARK 465 ASP A 293 REMARK 465 ALA A 294 REMARK 465 ARG A 295 REMARK 465 LEU A 296 REMARK 465 ALA A 297 REMARK 465 GLU A 298 REMARK 465 ASN A 299 REMARK 465 LEU A 300 REMARK 465 TYR A 301 REMARK 465 PHE A 302 REMARK 465 GLN A 303 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 608 O HOH A 647 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 167 24.65 48.28 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 404 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 71 SG REMARK 620 2 ASP A 72 OD1 133.5 REMARK 620 3 ASP A 72 OD2 89.9 61.4 REMARK 620 N 1 2 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EPE A 405 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EFI-500233 RELATED DB: TARGETTRACK REMARK 900 RELATED ID: EFI-500235 RELATED DB: TARGETTRACK DBREF 4DNM A 1 296 UNP A9ANE4 A9ANE4_BURM1 1 296 SEQADV 4DNM ALA A 297 UNP A9ANE4 EXPRESSION TAG SEQADV 4DNM GLU A 298 UNP A9ANE4 EXPRESSION TAG SEQADV 4DNM ASN A 299 UNP A9ANE4 EXPRESSION TAG SEQADV 4DNM LEU A 300 UNP A9ANE4 EXPRESSION TAG SEQADV 4DNM TYR A 301 UNP A9ANE4 EXPRESSION TAG SEQADV 4DNM PHE A 302 UNP A9ANE4 EXPRESSION TAG SEQADV 4DNM GLN A 303 UNP A9ANE4 EXPRESSION TAG SEQRES 1 A 303 MET GLY ALA LEU ARG ILE ASP SER HIS GLN HIS PHE TRP SEQRES 2 A 303 ARG TYR ARG ALA ALA ASP TYR PRO TRP ILE GLY ALA GLY SEQRES 3 A 303 MET GLY VAL LEU ALA ARG ASP TYR LEU PRO ASP ALA LEU SEQRES 4 A 303 HIS PRO LEU MET HIS ALA GLN ALA LEU GLY ALA SER ILE SEQRES 5 A 303 ALA VAL GLN ALA ARG ALA GLY ARG ASP GLU THR ALA PHE SEQRES 6 A 303 LEU LEU GLU LEU ALA CYS ASP GLU ALA ARG ILE ALA ALA SEQRES 7 A 303 VAL VAL GLY TRP GLU ASP LEU ARG ALA PRO GLN LEU ALA SEQRES 8 A 303 GLU ARG VAL ALA GLU TRP ARG GLY THR LYS LEU ARG GLY SEQRES 9 A 303 PHE ARG HIS GLN LEU GLN ASP GLU ALA ASP VAL ARG ALA SEQRES 10 A 303 PHE VAL ASP ASP ALA ASP PHE ALA ARG GLY VAL ALA TRP SEQRES 11 A 303 LEU GLN ALA ASN ASP TYR VAL TYR ASP VAL LEU VAL PHE SEQRES 12 A 303 GLU ARG GLN LEU PRO ASP VAL GLN ALA PHE CYS ALA ARG SEQRES 13 A 303 HIS ASP ALA HIS TRP LEU VAL LEU ASP HIS ALA GLY LYS SEQRES 14 A 303 PRO ALA LEU ALA GLU PHE ASP ARG ASP ASP THR ALA LEU SEQRES 15 A 303 ALA ARG TRP ARG ALA ALA LEU ARG GLU LEU ALA ALA LEU SEQRES 16 A 303 PRO HIS VAL VAL CYS LYS LEU SER GLY LEU VAL THR GLU SEQRES 17 A 303 ALA ASP TRP ARG ARG GLY LEU ARG ALA SER ASP LEU ARG SEQRES 18 A 303 HIS ILE GLU GLN CYS LEU ASP ALA ALA LEU ASP ALA PHE SEQRES 19 A 303 GLY PRO GLN ARG LEU MET PHE GLY SER ASP TRP PRO VAL SEQRES 20 A 303 CYS LEU LEU ALA ALA SER TYR ASP GLU VAL ALA SER LEU SEQRES 21 A 303 VAL GLU ARG TRP ALA GLU SER ARG LEU SER ALA ALA GLU SEQRES 22 A 303 ARG SER ALA LEU TRP GLY GLY THR ALA ALA ARG CYS TYR SEQRES 23 A 303 ALA LEU PRO GLU PRO ALA ASP ALA ARG LEU ALA GLU ASN SEQRES 24 A 303 LEU TYR PHE GLN HET GOL A 401 6 HET GOL A 402 6 HET GOL A 403 6 HET ZN A 404 1 HET EPE A 405 15 HETNAM GOL GLYCEROL HETNAM ZN ZINC ION HETNAM EPE 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL HETSYN EPE HEPES FORMUL 2 GOL 3(C3 H8 O3) FORMUL 5 ZN ZN 2+ FORMUL 6 EPE C8 H18 N2 O4 S FORMUL 7 HOH *194(H2 O) HELIX 1 1 ARG A 16 TYR A 20 5 5 HELIX 2 2 MET A 27 ALA A 31 5 5 HELIX 3 3 LEU A 35 GLN A 46 1 12 HELIX 4 4 GLY A 59 ASP A 72 1 14 HELIX 5 5 GLN A 89 GLU A 96 1 8 HELIX 6 6 GLN A 108 GLU A 112 5 5 HELIX 7 7 ASP A 114 ASP A 120 1 7 HELIX 8 8 ASP A 121 ASN A 134 1 14 HELIX 9 9 PHE A 143 ARG A 145 5 3 HELIX 10 10 GLN A 146 HIS A 157 1 12 HELIX 11 11 HIS A 166 LYS A 169 5 4 HELIX 12 12 ALA A 171 PHE A 175 5 5 HELIX 13 13 THR A 180 ALA A 194 1 15 HELIX 14 14 LEU A 205 ALA A 209 5 5 HELIX 15 15 ARG A 216 GLY A 235 1 20 HELIX 16 16 PRO A 246 ALA A 251 5 6 HELIX 17 17 SER A 253 LEU A 269 1 17 HELIX 18 18 SER A 270 TRP A 278 1 9 HELIX 19 19 GLY A 279 TYR A 286 1 8 SHEET 1 A 8 ILE A 6 GLN A 10 0 SHEET 2 A 8 ALA A 50 VAL A 54 1 O VAL A 54 N GLN A 10 SHEET 3 A 8 ILE A 76 GLY A 81 1 O VAL A 80 N ALA A 53 SHEET 4 A 8 LEU A 102 HIS A 107 1 O GLY A 104 N GLY A 81 SHEET 5 A 8 VAL A 137 VAL A 140 1 O ASP A 139 N PHE A 105 SHEET 6 A 8 LEU A 162 LEU A 164 1 O VAL A 163 N VAL A 140 SHEET 7 A 8 VAL A 198 LEU A 202 1 O VAL A 199 N LEU A 164 SHEET 8 A 8 LEU A 239 PHE A 241 1 O MET A 240 N LEU A 202 LINK SG CYS A 71 ZN ZN A 404 1555 1555 2.36 LINK OD1 ASP A 72 ZN ZN A 404 1555 1555 2.01 LINK OD2 ASP A 72 ZN ZN A 404 1555 1555 2.30 CISPEP 1 TRP A 245 PRO A 246 0 -0.88 SITE 1 AC1 4 GLU A 224 ARG A 263 ARG A 268 HOH A 654 SITE 1 AC2 9 TRP A 22 GLY A 24 ALA A 25 MET A 27 SITE 2 AC2 9 TRP A 161 ARG A 212 ARG A 284 HOH A 555 SITE 3 AC2 9 HOH A 674 SITE 1 AC3 6 ARG A 14 TYR A 20 ARG A 57 ASP A 61 SITE 2 AC3 6 GLU A 62 PHE A 65 SITE 1 AC4 4 CYS A 71 ASP A 72 ASP A 176 HIS A 222 SITE 1 AC5 9 HIS A 9 HIS A 11 TRP A 22 ARG A 106 SITE 2 AC5 9 GLN A 110 HIS A 166 ASP A 244 VAL A 247 SITE 3 AC5 9 HOH A 567 CRYST1 75.070 75.070 142.260 90.00 90.00 120.00 P 32 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013321 0.007691 0.000000 0.00000 SCALE2 0.000000 0.015382 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007029 0.00000