data_4DO8 # _entry.id 4DO8 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.397 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4DO8 pdb_00004do8 10.2210/pdb4do8/pdb RCSB RCSB070575 ? ? WWPDB D_1000070575 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2012-06-27 2 'Structure model' 1 1 2012-07-04 3 'Structure model' 1 2 2024-04-03 4 'Structure model' 1 3 2024-10-16 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' 'Refinement description' 6 4 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' pdbx_initial_refinement_model 5 3 'Structure model' struct_site 6 4 'Structure model' pdbx_entry_details 7 4 'Structure model' pdbx_modification_feature # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 4 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 5 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4DO8 _pdbx_database_status.recvd_initial_deposition_date 2012-02-09 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 2VLW 'CRYSTAL STRUCTURE OF THE MUSCARINIC TOXIN MT7 DIIODOTYR51 DERIVATIVE.' unspecified PDB 3FEV 'Crystal structure of the chimeric muscarinic toxin MT7 with loop 1 from MT1.' unspecified PDB 3NEQ 'Crystal structure of the chimeric muscarinic toxin MT7 with loop 3 from MT1' unspecified PDB 1FF4 'X-RAY STRUCTURE OF MUSCARINIC TOXIN 2 AT 1.5 ANGSTROM RESOLUTION' unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Fruchart-Gaillard, C.' 1 'Mournier, G.' 2 'Vera, L.' 3 'Servent, D.' 4 'Stura, E.A.' 5 # _citation.id primary _citation.title ;Engineering of three-finger fold toxins creates ligands with original pharmacological profiles for muscarinic and adrenergic receptors. ; _citation.journal_abbrev 'Plos One' _citation.journal_volume 7 _citation.page_first e39166 _citation.page_last e39166 _citation.year 2012 _citation.journal_id_ASTM ? _citation.country US _citation.journal_id_ISSN 1932-6203 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 22720062 _citation.pdbx_database_id_DOI 10.1371/journal.pone.0039166 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Fruchart-Gaillard, C.' 1 ? primary 'Mourier, G.' 2 ? primary 'Blanchet, G.' 3 ? primary 'Vera, L.' 4 ? primary 'Gilles, N.' 5 ? primary 'Menez, R.' 6 ? primary 'Marcon, E.' 7 ? primary 'Stura, E.A.' 8 ? primary 'Servent, D.' 9 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn 'Muscarinic toxin 1' 7525.621 2 ? ? 'Muscarinic toxin 1' ? 2 non-polymer syn 'THIOCYANATE ION' 58.082 1 ? ? ? ? 3 non-polymer syn 'ACETATE ION' 59.044 1 ? ? ? ? 4 water nat water 18.015 135 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'MT1, MTx1' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code LTCVTSKSIFGITTENCPDGQNLCFKKWYYIVPRYSDITWGCAATCPKPTNVRETIRCCETDKCNE _entity_poly.pdbx_seq_one_letter_code_can LTCVTSKSIFGITTENCPDGQNLCFKKWYYIVPRYSDITWGCAATCPKPTNVRETIRCCETDKCNE _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'THIOCYANATE ION' SCN 3 'ACETATE ION' ACT 4 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 LEU n 1 2 THR n 1 3 CYS n 1 4 VAL n 1 5 THR n 1 6 SER n 1 7 LYS n 1 8 SER n 1 9 ILE n 1 10 PHE n 1 11 GLY n 1 12 ILE n 1 13 THR n 1 14 THR n 1 15 GLU n 1 16 ASN n 1 17 CYS n 1 18 PRO n 1 19 ASP n 1 20 GLY n 1 21 GLN n 1 22 ASN n 1 23 LEU n 1 24 CYS n 1 25 PHE n 1 26 LYS n 1 27 LYS n 1 28 TRP n 1 29 TYR n 1 30 TYR n 1 31 ILE n 1 32 VAL n 1 33 PRO n 1 34 ARG n 1 35 TYR n 1 36 SER n 1 37 ASP n 1 38 ILE n 1 39 THR n 1 40 TRP n 1 41 GLY n 1 42 CYS n 1 43 ALA n 1 44 ALA n 1 45 THR n 1 46 CYS n 1 47 PRO n 1 48 LYS n 1 49 PRO n 1 50 THR n 1 51 ASN n 1 52 VAL n 1 53 ARG n 1 54 GLU n 1 55 THR n 1 56 ILE n 1 57 ARG n 1 58 CYS n 1 59 CYS n 1 60 GLU n 1 61 THR n 1 62 ASP n 1 63 LYS n 1 64 CYS n 1 65 ASN n 1 66 GLU n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific 'Dendroaspis angusticeps' _pdbx_entity_src_syn.organism_common_name 'Eastern green mamba' _pdbx_entity_src_syn.ncbi_taxonomy_id 8618 _pdbx_entity_src_syn.details 'Synthetic construct of natural toxin from Dendroaspis angusticeps.' # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ACT non-polymer . 'ACETATE ION' ? 'C2 H3 O2 -1' 59.044 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SCN non-polymer . 'THIOCYANATE ION' ? 'C N S -1' 58.082 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 LEU 1 1 1 LEU LEU A . n A 1 2 THR 2 2 2 THR THR A . n A 1 3 CYS 3 3 3 CYS CYS A . n A 1 4 VAL 4 4 4 VAL VAL A . n A 1 5 THR 5 5 5 THR THR A . n A 1 6 SER 6 6 6 SER SER A . n A 1 7 LYS 7 7 7 LYS LYS A . n A 1 8 SER 8 8 8 SER SER A . n A 1 9 ILE 9 9 9 ILE ILE A . n A 1 10 PHE 10 10 10 PHE PHE A . n A 1 11 GLY 11 11 11 GLY GLY A . n A 1 12 ILE 12 12 12 ILE ILE A . n A 1 13 THR 13 13 13 THR THR A . n A 1 14 THR 14 14 14 THR THR A . n A 1 15 GLU 15 15 15 GLU GLU A . n A 1 16 ASN 16 16 16 ASN ASN A . n A 1 17 CYS 17 17 17 CYS CYS A . n A 1 18 PRO 18 18 18 PRO PRO A . n A 1 19 ASP 19 19 19 ASP ASP A . n A 1 20 GLY 20 20 20 GLY GLY A . n A 1 21 GLN 21 21 21 GLN GLN A . n A 1 22 ASN 22 22 22 ASN ASN A . n A 1 23 LEU 23 23 23 LEU LEU A . n A 1 24 CYS 24 24 24 CYS CYS A . n A 1 25 PHE 25 25 25 PHE PHE A . n A 1 26 LYS 26 26 26 LYS LYS A . n A 1 27 LYS 27 27 27 LYS LYS A . n A 1 28 TRP 28 28 28 TRP TRP A . n A 1 29 TYR 29 29 29 TYR TYR A . n A 1 30 TYR 30 30 30 TYR TYR A . n A 1 31 ILE 31 31 31 ILE ILE A . n A 1 32 VAL 32 32 32 VAL VAL A . n A 1 33 PRO 33 33 33 PRO PRO A . n A 1 34 ARG 34 34 34 ARG ARG A . n A 1 35 TYR 35 35 35 TYR TYR A . n A 1 36 SER 36 36 36 SER SER A . n A 1 37 ASP 37 37 37 ASP ASP A . n A 1 38 ILE 38 38 38 ILE ILE A . n A 1 39 THR 39 39 39 THR THR A . n A 1 40 TRP 40 40 40 TRP TRP A . n A 1 41 GLY 41 41 41 GLY GLY A . n A 1 42 CYS 42 42 42 CYS CYS A . n A 1 43 ALA 43 43 43 ALA ALA A . n A 1 44 ALA 44 44 44 ALA ALA A . n A 1 45 THR 45 45 45 THR THR A . n A 1 46 CYS 46 46 46 CYS CYS A . n A 1 47 PRO 47 47 47 PRO PRO A . n A 1 48 LYS 48 48 48 LYS LYS A . n A 1 49 PRO 49 49 49 PRO PRO A . n A 1 50 THR 50 50 50 THR THR A . n A 1 51 ASN 51 51 51 ASN ASN A . n A 1 52 VAL 52 52 52 VAL VAL A . n A 1 53 ARG 53 53 53 ARG ARG A . n A 1 54 GLU 54 54 54 GLU GLU A . n A 1 55 THR 55 55 55 THR THR A . n A 1 56 ILE 56 56 56 ILE ILE A . n A 1 57 ARG 57 57 57 ARG ARG A . n A 1 58 CYS 58 58 58 CYS CYS A . n A 1 59 CYS 59 59 59 CYS CYS A . n A 1 60 GLU 60 60 60 GLU GLU A . n A 1 61 THR 61 61 61 THR THR A . n A 1 62 ASP 62 62 62 ASP ASP A . n A 1 63 LYS 63 63 63 LYS LYS A . n A 1 64 CYS 64 64 64 CYS CYS A . n A 1 65 ASN 65 65 65 ASN ASN A . n A 1 66 GLU 66 66 66 GLU GLU A . n B 1 1 LEU 1 1 1 LEU LEU B . n B 1 2 THR 2 2 2 THR THR B . n B 1 3 CYS 3 3 3 CYS CYS B . n B 1 4 VAL 4 4 4 VAL VAL B . n B 1 5 THR 5 5 5 THR THR B . n B 1 6 SER 6 6 6 SER SER B . n B 1 7 LYS 7 7 7 LYS LYS B . n B 1 8 SER 8 8 8 SER SER B . n B 1 9 ILE 9 9 9 ILE ILE B . n B 1 10 PHE 10 10 10 PHE PHE B . n B 1 11 GLY 11 11 11 GLY GLY B . n B 1 12 ILE 12 12 12 ILE ILE B . n B 1 13 THR 13 13 13 THR THR B . n B 1 14 THR 14 14 14 THR THR B . n B 1 15 GLU 15 15 15 GLU GLU B . n B 1 16 ASN 16 16 16 ASN ASN B . n B 1 17 CYS 17 17 17 CYS CYS B . n B 1 18 PRO 18 18 18 PRO PRO B . n B 1 19 ASP 19 19 19 ASP ASP B . n B 1 20 GLY 20 20 20 GLY GLY B . n B 1 21 GLN 21 21 21 GLN GLN B . n B 1 22 ASN 22 22 22 ASN ASN B . n B 1 23 LEU 23 23 23 LEU LEU B . n B 1 24 CYS 24 24 24 CYS CYS B . n B 1 25 PHE 25 25 25 PHE PHE B . n B 1 26 LYS 26 26 26 LYS LYS B . n B 1 27 LYS 27 27 27 LYS LYS B . n B 1 28 TRP 28 28 28 TRP TRP B . n B 1 29 TYR 29 29 29 TYR TYR B . n B 1 30 TYR 30 30 30 TYR TYR B . n B 1 31 ILE 31 31 31 ILE ILE B . n B 1 32 VAL 32 32 32 VAL VAL B . n B 1 33 PRO 33 33 33 PRO PRO B . n B 1 34 ARG 34 34 34 ARG ARG B . n B 1 35 TYR 35 35 35 TYR TYR B . n B 1 36 SER 36 36 36 SER SER B . n B 1 37 ASP 37 37 37 ASP ASP B . n B 1 38 ILE 38 38 38 ILE ILE B . n B 1 39 THR 39 39 39 THR THR B . n B 1 40 TRP 40 40 40 TRP TRP B . n B 1 41 GLY 41 41 41 GLY GLY B . n B 1 42 CYS 42 42 42 CYS CYS B . n B 1 43 ALA 43 43 43 ALA ALA B . n B 1 44 ALA 44 44 44 ALA ALA B . n B 1 45 THR 45 45 45 THR THR B . n B 1 46 CYS 46 46 46 CYS CYS B . n B 1 47 PRO 47 47 47 PRO PRO B . n B 1 48 LYS 48 48 48 LYS LYS B . n B 1 49 PRO 49 49 49 PRO PRO B . n B 1 50 THR 50 50 50 THR THR B . n B 1 51 ASN 51 51 51 ASN ASN B . n B 1 52 VAL 52 52 52 VAL VAL B . n B 1 53 ARG 53 53 53 ARG ARG B . n B 1 54 GLU 54 54 54 GLU GLU B . n B 1 55 THR 55 55 55 THR THR B . n B 1 56 ILE 56 56 56 ILE ILE B . n B 1 57 ARG 57 57 57 ARG ARG B . n B 1 58 CYS 58 58 58 CYS CYS B . n B 1 59 CYS 59 59 59 CYS CYS B . n B 1 60 GLU 60 60 60 GLU GLU B . n B 1 61 THR 61 61 61 THR THR B . n B 1 62 ASP 62 62 62 ASP ASP B . n B 1 63 LYS 63 63 63 LYS LYS B . n B 1 64 CYS 64 64 64 CYS CYS B . n B 1 65 ASN 65 65 65 ASN ASN B . n B 1 66 GLU 66 66 66 GLU GLU B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 SCN 1 101 1 SCN SCN A . D 3 ACT 1 101 2 ACT ACT B . E 4 HOH 1 201 2 HOH HOH A . E 4 HOH 2 202 3 HOH HOH A . E 4 HOH 3 203 4 HOH HOH A . E 4 HOH 4 204 5 HOH HOH A . E 4 HOH 5 205 7 HOH HOH A . E 4 HOH 6 206 8 HOH HOH A . E 4 HOH 7 207 9 HOH HOH A . E 4 HOH 8 208 10 HOH HOH A . E 4 HOH 9 209 11 HOH HOH A . E 4 HOH 10 210 12 HOH HOH A . E 4 HOH 11 211 13 HOH HOH A . E 4 HOH 12 212 14 HOH HOH A . E 4 HOH 13 213 15 HOH HOH A . E 4 HOH 14 214 16 HOH HOH A . E 4 HOH 15 215 17 HOH HOH A . E 4 HOH 16 216 18 HOH HOH A . E 4 HOH 17 217 19 HOH HOH A . E 4 HOH 18 218 20 HOH HOH A . E 4 HOH 19 219 21 HOH HOH A . E 4 HOH 20 220 22 HOH HOH A . E 4 HOH 21 221 24 HOH HOH A . E 4 HOH 22 222 27 HOH HOH A . E 4 HOH 23 223 28 HOH HOH A . E 4 HOH 24 224 29 HOH HOH A . E 4 HOH 25 225 30 HOH HOH A . E 4 HOH 26 226 33 HOH HOH A . E 4 HOH 27 227 35 HOH HOH A . E 4 HOH 28 228 38 HOH HOH A . E 4 HOH 29 229 39 HOH HOH A . E 4 HOH 30 230 41 HOH HOH A . E 4 HOH 31 231 43 HOH HOH A . E 4 HOH 32 232 44 HOH HOH A . E 4 HOH 33 233 45 HOH HOH A . E 4 HOH 34 234 46 HOH HOH A . E 4 HOH 35 235 49 HOH HOH A . E 4 HOH 36 236 63 HOH HOH A . E 4 HOH 37 237 64 HOH HOH A . E 4 HOH 38 238 67 HOH HOH A . E 4 HOH 39 239 68 HOH HOH A . E 4 HOH 40 240 70 HOH HOH A . E 4 HOH 41 241 71 HOH HOH A . E 4 HOH 42 242 72 HOH HOH A . E 4 HOH 43 243 73 HOH HOH A . E 4 HOH 44 244 85 HOH HOH A . E 4 HOH 45 245 86 HOH HOH A . E 4 HOH 46 246 88 HOH HOH A . E 4 HOH 47 247 90 HOH HOH A . E 4 HOH 48 248 92 HOH HOH A . E 4 HOH 49 249 97 HOH HOH A . E 4 HOH 50 250 98 HOH HOH A . E 4 HOH 51 251 99 HOH HOH A . E 4 HOH 52 252 100 HOH HOH A . E 4 HOH 53 253 101 HOH HOH A . E 4 HOH 54 254 103 HOH HOH A . E 4 HOH 55 255 107 HOH HOH A . E 4 HOH 56 256 110 HOH HOH A . E 4 HOH 57 257 112 HOH HOH A . E 4 HOH 58 258 118 HOH HOH A . E 4 HOH 59 259 120 HOH HOH A . E 4 HOH 60 260 125 HOH HOH A . E 4 HOH 61 261 126 HOH HOH A . E 4 HOH 62 262 128 HOH HOH A . F 4 HOH 1 201 1 HOH HOH B . F 4 HOH 2 202 6 HOH HOH B . F 4 HOH 3 203 23 HOH HOH B . F 4 HOH 4 204 25 HOH HOH B . F 4 HOH 5 205 26 HOH HOH B . F 4 HOH 6 206 31 HOH HOH B . F 4 HOH 7 207 32 HOH HOH B . F 4 HOH 8 208 34 HOH HOH B . F 4 HOH 9 209 36 HOH HOH B . F 4 HOH 10 210 37 HOH HOH B . F 4 HOH 11 211 40 HOH HOH B . F 4 HOH 12 212 42 HOH HOH B . F 4 HOH 13 213 47 HOH HOH B . F 4 HOH 14 214 48 HOH HOH B . F 4 HOH 15 215 50 HOH HOH B . F 4 HOH 16 216 51 HOH HOH B . F 4 HOH 17 217 52 HOH HOH B . F 4 HOH 18 218 53 HOH HOH B . F 4 HOH 19 219 54 HOH HOH B . F 4 HOH 20 220 55 HOH HOH B . F 4 HOH 21 221 56 HOH HOH B . F 4 HOH 22 222 57 HOH HOH B . F 4 HOH 23 223 58 HOH HOH B . F 4 HOH 24 224 59 HOH HOH B . F 4 HOH 25 225 60 HOH HOH B . F 4 HOH 26 226 61 HOH HOH B . F 4 HOH 27 227 62 HOH HOH B . F 4 HOH 28 228 65 HOH HOH B . F 4 HOH 29 229 66 HOH HOH B . F 4 HOH 30 230 69 HOH HOH B . F 4 HOH 31 231 74 HOH HOH B . F 4 HOH 32 232 75 HOH HOH B . F 4 HOH 33 233 76 HOH HOH B . F 4 HOH 34 234 77 HOH HOH B . F 4 HOH 35 235 78 HOH HOH B . F 4 HOH 36 236 79 HOH HOH B . F 4 HOH 37 237 80 HOH HOH B . F 4 HOH 38 238 81 HOH HOH B . F 4 HOH 39 239 82 HOH HOH B . F 4 HOH 40 240 83 HOH HOH B . F 4 HOH 41 241 84 HOH HOH B . F 4 HOH 42 242 87 HOH HOH B . F 4 HOH 43 243 89 HOH HOH B . F 4 HOH 44 244 91 HOH HOH B . F 4 HOH 45 245 93 HOH HOH B . F 4 HOH 46 246 94 HOH HOH B . F 4 HOH 47 247 95 HOH HOH B . F 4 HOH 48 248 96 HOH HOH B . F 4 HOH 49 249 102 HOH HOH B . F 4 HOH 50 250 104 HOH HOH B . F 4 HOH 51 251 105 HOH HOH B . F 4 HOH 52 252 106 HOH HOH B . F 4 HOH 53 253 108 HOH HOH B . F 4 HOH 54 254 109 HOH HOH B . F 4 HOH 55 255 111 HOH HOH B . F 4 HOH 56 256 113 HOH HOH B . F 4 HOH 57 257 114 HOH HOH B . F 4 HOH 58 258 115 HOH HOH B . F 4 HOH 59 259 116 HOH HOH B . F 4 HOH 60 260 117 HOH HOH B . F 4 HOH 61 261 119 HOH HOH B . F 4 HOH 62 262 121 HOH HOH B . F 4 HOH 63 263 122 HOH HOH B . F 4 HOH 64 264 123 HOH HOH B . F 4 HOH 65 265 124 HOH HOH B . F 4 HOH 66 266 127 HOH HOH B . F 4 HOH 67 267 129 HOH HOH B . F 4 HOH 68 268 130 HOH HOH B . F 4 HOH 69 269 131 HOH HOH B . F 4 HOH 70 270 132 HOH HOH B . F 4 HOH 71 271 133 HOH HOH B . F 4 HOH 72 272 134 HOH HOH B . F 4 HOH 73 273 135 HOH HOH B . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal DNA 'data collection' . ? 1 PHASER phasing . ? 2 REFMAC refinement 5.5.0109 ? 3 XDS 'data reduction' . ? 4 XSCALE 'data scaling' . ? 5 # _cell.entry_id 4DO8 _cell.length_a 32.280 _cell.length_b 116.040 _cell.length_c 46.190 _cell.angle_alpha 90.00 _cell.angle_beta 108.01 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4DO8 _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? # _exptl.entry_id 4DO8 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.73 _exptl_crystal.density_percent_sol 54.99 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pdbx_details ;Protein: 8.3 mg/mL in 0.05M sodium Acetate pH 5.5. Precipitant: 36% MPEG 2K, 0.1mM imidazole-HCl, .45M NaCl, 0.09M KSCN, VAPOR DIFFUSION, SITTING DROP, temperature 293K ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315r' _diffrn_detector.pdbx_collection_date 2011-11-03 _diffrn_detector.details mirrors # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'SAGITALLY FOCUSED Si(111)' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.980000 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ESRF BEAMLINE ID23-1' _diffrn_source.pdbx_synchrotron_site ESRF _diffrn_source.pdbx_synchrotron_beamline ID23-1 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.980000 # _reflns.entry_id 4DO8 _reflns.observed_criterion_sigma_I -3 _reflns.observed_criterion_sigma_F 0 _reflns.d_resolution_low 50 _reflns.d_resolution_high 1.80 _reflns.number_obs 14793 _reflns.number_all 14956 _reflns.percent_possible_obs 98.9 _reflns.pdbx_Rmerge_I_obs 0.094 _reflns.pdbx_Rsym_value 0.081 _reflns.pdbx_netI_over_sigmaI 10.67 _reflns.B_iso_Wilson_estimate 34.018 _reflns.pdbx_redundancy 4.06 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.percent_possible_all _reflns_shell.Rmerge_I_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_unique_obs _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 1.80 1.91 96.0 0.729 0.633 2.50 3.96 ? 2325 ? ? ? ? 1 1 1.91 2.04 99.7 0.352 0.307 4.99 4.11 ? 2250 ? ? ? ? 2 1 2.04 2.21 100 0.214 0.187 7.50 4.16 ? 2104 ? ? ? ? 3 1 2.21 2.42 99.8 0.166 0.145 9.38 4.16 ? 1936 ? ? ? ? 4 1 2.42 2.70 99.5 0.109 0.095 13.04 4.14 ? 1763 ? ? ? ? 5 1 2.70 3.12 100 0.083 0.072 16.78 4.07 ? 1538 ? ? ? ? 6 1 3.12 3.81 99.5 0.073 0.063 19.72 3.98 ? 1316 ? ? ? ? 7 1 3.81 5.37 99.2 0.069 0.060 20.68 3.88 ? 1020 ? ? ? ? 8 1 5.37 50 93.4 0.062 0.054 20.48 3.78 ? 541 ? ? ? ? 9 1 # _refine.entry_id 4DO8 _refine.ls_number_reflns_obs 14044 _refine.ls_number_reflns_all 14793 _refine.pdbx_ls_sigma_I -3 _refine.pdbx_ls_sigma_F 0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 35.02 _refine.ls_d_res_high 1.802 _refine.ls_percent_reflns_obs 100.00 _refine.ls_R_factor_obs 0.19472 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.19266 _refine.ls_R_factor_R_free 0.23377 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.0 _refine.ls_number_reflns_R_free 740 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.956 _refine.correlation_coeff_Fo_to_Fc_free 0.937 _refine.B_iso_mean 33.789 _refine.aniso_B[1][1] 1.72 _refine.aniso_B[2][2] -1.25 _refine.aniso_B[3][3] -0.42 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.07 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model 'RHO-DA1A (UNPUBLISHED)' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model 'Isotropic / TLS' _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.128 _refine.pdbx_overall_ESU_R_Free 0.126 _refine.overall_SU_ML 0.097 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 6.806 _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1044 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 7 _refine_hist.number_atoms_solvent 135 _refine_hist.number_atoms_total 1186 _refine_hist.d_res_high 1.802 _refine_hist.d_res_low 35.02 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id r_bond_refined_d 0.026 0.022 ? 1100 ? 'X-RAY DIFFRACTION' r_bond_other_d ? ? ? ? ? 'X-RAY DIFFRACTION' r_angle_refined_deg 2.107 1.955 ? 1502 ? 'X-RAY DIFFRACTION' r_angle_other_deg ? ? ? ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_1_deg 7.834 5.000 ? 134 ? 'X-RAY DIFFRACTION' r_dihedral_angle_2_deg 36.818 24.091 ? 44 ? 'X-RAY DIFFRACTION' r_dihedral_angle_3_deg 15.101 15.000 ? 186 ? 'X-RAY DIFFRACTION' r_dihedral_angle_4_deg 7.793 15.000 ? 6 ? 'X-RAY DIFFRACTION' r_chiral_restr 0.144 0.200 ? 167 ? 'X-RAY DIFFRACTION' r_gen_planes_refined 0.013 0.021 ? 822 ? 'X-RAY DIFFRACTION' r_gen_planes_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_nbd_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_nbd_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_nbtor_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_nbtor_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_xyhbond_nbd_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_xyhbond_nbd_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_metal_ion_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_metal_ion_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_vdw_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_vdw_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_hbond_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_hbond_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_metal_ion_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_metal_ion_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_mcbond_it 1.416 1.500 ? 679 ? 'X-RAY DIFFRACTION' r_mcbond_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_mcangle_it 2.234 2.000 ? 1115 ? 'X-RAY DIFFRACTION' r_scbond_it 3.431 3.000 ? 421 ? 'X-RAY DIFFRACTION' r_scangle_it 5.102 4.500 ? 387 ? 'X-RAY DIFFRACTION' r_rigid_bond_restr ? ? ? ? ? 'X-RAY DIFFRACTION' r_sphericity_free ? ? ? ? ? 'X-RAY DIFFRACTION' r_sphericity_bonded ? ? ? ? ? 'X-RAY DIFFRACTION' # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.802 _refine_ls_shell.d_res_low 1.849 _refine_ls_shell.number_reflns_R_work 971 _refine_ls_shell.R_factor_R_work 0.289 _refine_ls_shell.percent_reflns_obs 100.00 _refine_ls_shell.R_factor_R_free 0.293 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 51 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _database_PDB_matrix.entry_id 4DO8 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 4DO8 _struct.title 'Crystal structure of the muscarinic toxin MT1' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4DO8 _struct_keywords.pdbx_keywords TOXIN _struct_keywords.text ;snake toxin, Three-finger toxin fold, Muscarinic toxin, MUSCARINIC M1 receptor, neurones, MUSCARINIC M4 receptor, adrenergic receptor, toxin ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 4 ? F N N 4 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code TXM1_DENAN _struct_ref.pdbx_db_accession P81030 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code LTCVTSKSIFGITTENCPDGQNLCFKKWYYIVPRYSDITWGCAATCPKPTNVRETIRCCETDKCNE _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4DO8 A 1 ? 66 ? P81030 1 ? 66 ? 1 66 2 1 4DO8 B 1 ? 66 ? P81030 1 ? 66 ? 1 66 # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_defined_assembly ? monomeric 1 2 author_defined_assembly ? monomeric 1 3 software_defined_assembly PISA tetrameric 4 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 3 'ABSA (A^2)' 5290 ? 3 MORE -37 ? 3 'SSA (A^2)' 13710 ? # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,C,E 2 1 B,D,F 3 1,2 A,B,C,D,E,F # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_555 -x,y,-z -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 3 SG ? ? ? 1_555 A CYS 24 SG ? ? A CYS 3 A CYS 24 1_555 ? ? ? ? ? ? ? 2.091 ? ? disulf2 disulf ? ? A CYS 17 SG ? ? ? 1_555 A CYS 42 SG ? ? A CYS 17 A CYS 42 1_555 ? ? ? ? ? ? ? 2.112 ? ? disulf3 disulf ? ? A CYS 46 SG ? ? ? 1_555 A CYS 58 SG ? ? A CYS 46 A CYS 58 1_555 ? ? ? ? ? ? ? 2.094 ? ? disulf4 disulf ? ? A CYS 59 SG ? ? ? 1_555 A CYS 64 SG ? ? A CYS 59 A CYS 64 1_555 ? ? ? ? ? ? ? 2.029 ? ? disulf5 disulf ? ? B CYS 3 SG ? ? ? 1_555 B CYS 24 SG ? ? B CYS 3 B CYS 24 1_555 ? ? ? ? ? ? ? 2.046 ? ? disulf6 disulf ? ? B CYS 17 SG ? ? ? 1_555 B CYS 42 SG ? ? B CYS 17 B CYS 42 1_555 ? ? ? ? ? ? ? 2.085 ? ? disulf7 disulf ? ? B CYS 46 SG ? ? ? 1_555 B CYS 58 SG ? ? B CYS 46 B CYS 58 1_555 ? ? ? ? ? ? ? 2.068 ? ? disulf8 disulf ? ? B CYS 59 SG ? ? ? 1_555 B CYS 64 SG ? ? B CYS 59 B CYS 64 1_555 ? ? ? ? ? ? ? 2.028 ? ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_modification_feature.ordinal _pdbx_modification_feature.label_comp_id _pdbx_modification_feature.label_asym_id _pdbx_modification_feature.label_seq_id _pdbx_modification_feature.label_alt_id _pdbx_modification_feature.modified_residue_label_comp_id _pdbx_modification_feature.modified_residue_label_asym_id _pdbx_modification_feature.modified_residue_label_seq_id _pdbx_modification_feature.modified_residue_label_alt_id _pdbx_modification_feature.auth_comp_id _pdbx_modification_feature.auth_asym_id _pdbx_modification_feature.auth_seq_id _pdbx_modification_feature.PDB_ins_code _pdbx_modification_feature.symmetry _pdbx_modification_feature.modified_residue_auth_comp_id _pdbx_modification_feature.modified_residue_auth_asym_id _pdbx_modification_feature.modified_residue_auth_seq_id _pdbx_modification_feature.modified_residue_PDB_ins_code _pdbx_modification_feature.modified_residue_symmetry _pdbx_modification_feature.comp_id_linking_atom _pdbx_modification_feature.modified_residue_id_linking_atom _pdbx_modification_feature.modified_residue_id _pdbx_modification_feature.ref_pcm_id _pdbx_modification_feature.ref_comp_id _pdbx_modification_feature.type _pdbx_modification_feature.category 1 CYS A 3 ? CYS A 24 ? CYS A 3 ? 1_555 CYS A 24 ? 1_555 SG SG . . . None 'Disulfide bridge' 2 CYS A 17 ? CYS A 42 ? CYS A 17 ? 1_555 CYS A 42 ? 1_555 SG SG . . . None 'Disulfide bridge' 3 CYS A 46 ? CYS A 58 ? CYS A 46 ? 1_555 CYS A 58 ? 1_555 SG SG . . . None 'Disulfide bridge' 4 CYS A 59 ? CYS A 64 ? CYS A 59 ? 1_555 CYS A 64 ? 1_555 SG SG . . . None 'Disulfide bridge' 5 CYS B 3 ? CYS B 24 ? CYS B 3 ? 1_555 CYS B 24 ? 1_555 SG SG . . . None 'Disulfide bridge' 6 CYS B 17 ? CYS B 42 ? CYS B 17 ? 1_555 CYS B 42 ? 1_555 SG SG . . . None 'Disulfide bridge' 7 CYS B 46 ? CYS B 58 ? CYS B 46 ? 1_555 CYS B 58 ? 1_555 SG SG . . . None 'Disulfide bridge' 8 CYS B 59 ? CYS B 64 ? CYS B 59 ? 1_555 CYS B 64 ? 1_555 SG SG . . . None 'Disulfide bridge' # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 2 ? B ? 3 ? C ? 2 ? D ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel C 1 2 ? anti-parallel D 1 2 ? anti-parallel D 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 THR A 2 ? SER A 8 ? THR A 2 SER A 8 A 2 GLY A 11 ? ASN A 16 ? GLY A 11 ASN A 16 B 1 TYR A 35 ? ALA A 43 ? TYR A 35 ALA A 43 B 2 LEU A 23 ? VAL A 32 ? LEU A 23 VAL A 32 B 3 GLU A 54 ? CYS A 59 ? GLU A 54 CYS A 59 C 1 THR B 2 ? SER B 8 ? THR B 2 SER B 8 C 2 GLY B 11 ? ASN B 16 ? GLY B 11 ASN B 16 D 1 TYR B 35 ? ALA B 43 ? TYR B 35 ALA B 43 D 2 LEU B 23 ? VAL B 32 ? LEU B 23 VAL B 32 D 3 GLU B 54 ? CYS B 59 ? GLU B 54 CYS B 59 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N CYS A 3 ? N CYS A 3 O GLU A 15 ? O GLU A 15 B 1 2 O ALA A 43 ? O ALA A 43 N LEU A 23 ? N LEU A 23 B 2 3 N CYS A 24 ? N CYS A 24 O CYS A 59 ? O CYS A 59 C 1 2 N SER B 8 ? N SER B 8 O GLY B 11 ? O GLY B 11 D 1 2 O ASP B 37 ? O ASP B 37 N TYR B 29 ? N TYR B 29 D 2 3 N CYS B 24 ? N CYS B 24 O CYS B 59 ? O CYS B 59 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A SCN 101 ? 6 'BINDING SITE FOR RESIDUE SCN A 101' AC2 Software B ACT 101 ? 2 'BINDING SITE FOR RESIDUE ACT B 101' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 VAL A 32 ? VAL A 32 . ? 1_555 ? 2 AC1 6 PRO A 33 ? PRO A 33 . ? 1_555 ? 3 AC1 6 ARG A 34 ? ARG A 34 . ? 1_555 ? 4 AC1 6 SER B 8 ? SER B 8 . ? 1_555 ? 5 AC1 6 ILE B 9 ? ILE B 9 . ? 1_555 ? 6 AC1 6 TYR B 35 ? TYR B 35 . ? 2_555 ? 7 AC2 2 TRP B 28 ? TRP B 28 . ? 1_555 ? 8 AC2 2 THR B 55 ? THR B 55 . ? 1_555 ? # _pdbx_entry_details.entry_id 4DO8 _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification Y # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined 2.0480 2.9840 10.2570 0.1164 0.1184 0.1273 -0.0635 -0.0085 -0.0082 0.6992 3.9579 2.6011 0.2584 -0.0218 -1.8839 0.0417 0.0210 0.0781 0.3732 -0.1650 -0.0866 0.1438 -0.0781 0.1232 'X-RAY DIFFRACTION' 2 ? refined -2.0880 30.2790 10.3040 0.1883 0.0695 0.0998 -0.0536 0.0297 -0.0035 0.4482 4.5579 2.7060 -0.7253 -0.7501 2.0340 0.1232 0.0173 0.0347 0.4002 -0.2031 0.1895 -0.2966 0.0034 0.0799 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 A 1 ? ? A 66 ? ? ? ? 'X-RAY DIFFRACTION' 2 2 B 1 ? ? B 66 ? ? ? ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ACT C C N N 1 ACT O O N N 2 ACT OXT O N N 3 ACT CH3 C N N 4 ACT H1 H N N 5 ACT H2 H N N 6 ACT H3 H N N 7 ALA N N N N 8 ALA CA C N S 9 ALA C C N N 10 ALA O O N N 11 ALA CB C N N 12 ALA OXT O N N 13 ALA H H N N 14 ALA H2 H N N 15 ALA HA H N N 16 ALA HB1 H N N 17 ALA HB2 H N N 18 ALA HB3 H N N 19 ALA HXT H N N 20 ARG N N N N 21 ARG CA C N S 22 ARG C C N N 23 ARG O O N N 24 ARG CB C N N 25 ARG CG C N N 26 ARG CD C N N 27 ARG NE N N N 28 ARG CZ C N N 29 ARG NH1 N N N 30 ARG NH2 N N N 31 ARG OXT O N N 32 ARG H H N N 33 ARG H2 H N N 34 ARG HA H N N 35 ARG HB2 H N N 36 ARG HB3 H N N 37 ARG HG2 H N N 38 ARG HG3 H N N 39 ARG HD2 H N N 40 ARG HD3 H N N 41 ARG HE H N N 42 ARG HH11 H N N 43 ARG HH12 H N N 44 ARG HH21 H N N 45 ARG HH22 H N N 46 ARG HXT H N N 47 ASN N N N N 48 ASN CA C N S 49 ASN C C N N 50 ASN O O N N 51 ASN CB C N N 52 ASN CG C N N 53 ASN OD1 O N N 54 ASN ND2 N N N 55 ASN OXT O N N 56 ASN H H N N 57 ASN H2 H N N 58 ASN HA H N N 59 ASN HB2 H N N 60 ASN HB3 H N N 61 ASN HD21 H N N 62 ASN HD22 H N N 63 ASN HXT H N N 64 ASP N N N N 65 ASP CA C N S 66 ASP C C N N 67 ASP O O N N 68 ASP CB C N N 69 ASP CG C N N 70 ASP OD1 O N N 71 ASP OD2 O N N 72 ASP OXT O N N 73 ASP H H N N 74 ASP H2 H N N 75 ASP HA H N N 76 ASP HB2 H N N 77 ASP HB3 H N N 78 ASP HD2 H N N 79 ASP HXT H N N 80 CYS N N N N 81 CYS CA C N R 82 CYS C C N N 83 CYS O O N N 84 CYS CB C N N 85 CYS SG S N N 86 CYS OXT O N N 87 CYS H H N N 88 CYS H2 H N N 89 CYS HA H N N 90 CYS HB2 H N N 91 CYS HB3 H N N 92 CYS HG H N N 93 CYS HXT H N N 94 GLN N N N N 95 GLN CA C N S 96 GLN C C N N 97 GLN O O N N 98 GLN CB C N N 99 GLN CG C N N 100 GLN CD C N N 101 GLN OE1 O N N 102 GLN NE2 N N N 103 GLN OXT O N N 104 GLN H H N N 105 GLN H2 H N N 106 GLN HA H N N 107 GLN HB2 H N N 108 GLN HB3 H N N 109 GLN HG2 H N N 110 GLN HG3 H N N 111 GLN HE21 H N N 112 GLN HE22 H N N 113 GLN HXT H N N 114 GLU N N N N 115 GLU CA C N S 116 GLU C C N N 117 GLU O O N N 118 GLU CB C N N 119 GLU CG C N N 120 GLU CD C N N 121 GLU OE1 O N N 122 GLU OE2 O N N 123 GLU OXT O N N 124 GLU H H N N 125 GLU H2 H N N 126 GLU HA H N N 127 GLU HB2 H N N 128 GLU HB3 H N N 129 GLU HG2 H N N 130 GLU HG3 H N N 131 GLU HE2 H N N 132 GLU HXT H N N 133 GLY N N N N 134 GLY CA C N N 135 GLY C C N N 136 GLY O O N N 137 GLY OXT O N N 138 GLY H H N N 139 GLY H2 H N N 140 GLY HA2 H N N 141 GLY HA3 H N N 142 GLY HXT H N N 143 HOH O O N N 144 HOH H1 H N N 145 HOH H2 H N N 146 ILE N N N N 147 ILE CA C N S 148 ILE C C N N 149 ILE O O N N 150 ILE CB C N S 151 ILE CG1 C N N 152 ILE CG2 C N N 153 ILE CD1 C N N 154 ILE OXT O N N 155 ILE H H N N 156 ILE H2 H N N 157 ILE HA H N N 158 ILE HB H N N 159 ILE HG12 H N N 160 ILE HG13 H N N 161 ILE HG21 H N N 162 ILE HG22 H N N 163 ILE HG23 H N N 164 ILE HD11 H N N 165 ILE HD12 H N N 166 ILE HD13 H N N 167 ILE HXT H N N 168 LEU N N N N 169 LEU CA C N S 170 LEU C C N N 171 LEU O O N N 172 LEU CB C N N 173 LEU CG C N N 174 LEU CD1 C N N 175 LEU CD2 C N N 176 LEU OXT O N N 177 LEU H H N N 178 LEU H2 H N N 179 LEU HA H N N 180 LEU HB2 H N N 181 LEU HB3 H N N 182 LEU HG H N N 183 LEU HD11 H N N 184 LEU HD12 H N N 185 LEU HD13 H N N 186 LEU HD21 H N N 187 LEU HD22 H N N 188 LEU HD23 H N N 189 LEU HXT H N N 190 LYS N N N N 191 LYS CA C N S 192 LYS C C N N 193 LYS O O N N 194 LYS CB C N N 195 LYS CG C N N 196 LYS CD C N N 197 LYS CE C N N 198 LYS NZ N N N 199 LYS OXT O N N 200 LYS H H N N 201 LYS H2 H N N 202 LYS HA H N N 203 LYS HB2 H N N 204 LYS HB3 H N N 205 LYS HG2 H N N 206 LYS HG3 H N N 207 LYS HD2 H N N 208 LYS HD3 H N N 209 LYS HE2 H N N 210 LYS HE3 H N N 211 LYS HZ1 H N N 212 LYS HZ2 H N N 213 LYS HZ3 H N N 214 LYS HXT H N N 215 PHE N N N N 216 PHE CA C N S 217 PHE C C N N 218 PHE O O N N 219 PHE CB C N N 220 PHE CG C Y N 221 PHE CD1 C Y N 222 PHE CD2 C Y N 223 PHE CE1 C Y N 224 PHE CE2 C Y N 225 PHE CZ C Y N 226 PHE OXT O N N 227 PHE H H N N 228 PHE H2 H N N 229 PHE HA H N N 230 PHE HB2 H N N 231 PHE HB3 H N N 232 PHE HD1 H N N 233 PHE HD2 H N N 234 PHE HE1 H N N 235 PHE HE2 H N N 236 PHE HZ H N N 237 PHE HXT H N N 238 PRO N N N N 239 PRO CA C N S 240 PRO C C N N 241 PRO O O N N 242 PRO CB C N N 243 PRO CG C N N 244 PRO CD C N N 245 PRO OXT O N N 246 PRO H H N N 247 PRO HA H N N 248 PRO HB2 H N N 249 PRO HB3 H N N 250 PRO HG2 H N N 251 PRO HG3 H N N 252 PRO HD2 H N N 253 PRO HD3 H N N 254 PRO HXT H N N 255 SCN S S N N 256 SCN C C N N 257 SCN N N N N 258 SER N N N N 259 SER CA C N S 260 SER C C N N 261 SER O O N N 262 SER CB C N N 263 SER OG O N N 264 SER OXT O N N 265 SER H H N N 266 SER H2 H N N 267 SER HA H N N 268 SER HB2 H N N 269 SER HB3 H N N 270 SER HG H N N 271 SER HXT H N N 272 THR N N N N 273 THR CA C N S 274 THR C C N N 275 THR O O N N 276 THR CB C N R 277 THR OG1 O N N 278 THR CG2 C N N 279 THR OXT O N N 280 THR H H N N 281 THR H2 H N N 282 THR HA H N N 283 THR HB H N N 284 THR HG1 H N N 285 THR HG21 H N N 286 THR HG22 H N N 287 THR HG23 H N N 288 THR HXT H N N 289 TRP N N N N 290 TRP CA C N S 291 TRP C C N N 292 TRP O O N N 293 TRP CB C N N 294 TRP CG C Y N 295 TRP CD1 C Y N 296 TRP CD2 C Y N 297 TRP NE1 N Y N 298 TRP CE2 C Y N 299 TRP CE3 C Y N 300 TRP CZ2 C Y N 301 TRP CZ3 C Y N 302 TRP CH2 C Y N 303 TRP OXT O N N 304 TRP H H N N 305 TRP H2 H N N 306 TRP HA H N N 307 TRP HB2 H N N 308 TRP HB3 H N N 309 TRP HD1 H N N 310 TRP HE1 H N N 311 TRP HE3 H N N 312 TRP HZ2 H N N 313 TRP HZ3 H N N 314 TRP HH2 H N N 315 TRP HXT H N N 316 TYR N N N N 317 TYR CA C N S 318 TYR C C N N 319 TYR O O N N 320 TYR CB C N N 321 TYR CG C Y N 322 TYR CD1 C Y N 323 TYR CD2 C Y N 324 TYR CE1 C Y N 325 TYR CE2 C Y N 326 TYR CZ C Y N 327 TYR OH O N N 328 TYR OXT O N N 329 TYR H H N N 330 TYR H2 H N N 331 TYR HA H N N 332 TYR HB2 H N N 333 TYR HB3 H N N 334 TYR HD1 H N N 335 TYR HD2 H N N 336 TYR HE1 H N N 337 TYR HE2 H N N 338 TYR HH H N N 339 TYR HXT H N N 340 VAL N N N N 341 VAL CA C N S 342 VAL C C N N 343 VAL O O N N 344 VAL CB C N N 345 VAL CG1 C N N 346 VAL CG2 C N N 347 VAL OXT O N N 348 VAL H H N N 349 VAL H2 H N N 350 VAL HA H N N 351 VAL HB H N N 352 VAL HG11 H N N 353 VAL HG12 H N N 354 VAL HG13 H N N 355 VAL HG21 H N N 356 VAL HG22 H N N 357 VAL HG23 H N N 358 VAL HXT H N N 359 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ACT C O doub N N 1 ACT C OXT sing N N 2 ACT C CH3 sing N N 3 ACT CH3 H1 sing N N 4 ACT CH3 H2 sing N N 5 ACT CH3 H3 sing N N 6 ALA N CA sing N N 7 ALA N H sing N N 8 ALA N H2 sing N N 9 ALA CA C sing N N 10 ALA CA CB sing N N 11 ALA CA HA sing N N 12 ALA C O doub N N 13 ALA C OXT sing N N 14 ALA CB HB1 sing N N 15 ALA CB HB2 sing N N 16 ALA CB HB3 sing N N 17 ALA OXT HXT sing N N 18 ARG N CA sing N N 19 ARG N H sing N N 20 ARG N H2 sing N N 21 ARG CA C sing N N 22 ARG CA CB sing N N 23 ARG CA HA sing N N 24 ARG C O doub N N 25 ARG C OXT sing N N 26 ARG CB CG sing N N 27 ARG CB HB2 sing N N 28 ARG CB HB3 sing N N 29 ARG CG CD sing N N 30 ARG CG HG2 sing N N 31 ARG CG HG3 sing N N 32 ARG CD NE sing N N 33 ARG CD HD2 sing N N 34 ARG CD HD3 sing N N 35 ARG NE CZ sing N N 36 ARG NE HE sing N N 37 ARG CZ NH1 sing N N 38 ARG CZ NH2 doub N N 39 ARG NH1 HH11 sing N N 40 ARG NH1 HH12 sing N N 41 ARG NH2 HH21 sing N N 42 ARG NH2 HH22 sing N N 43 ARG OXT HXT sing N N 44 ASN N CA sing N N 45 ASN N H sing N N 46 ASN N H2 sing N N 47 ASN CA C sing N N 48 ASN CA CB sing N N 49 ASN CA HA sing N N 50 ASN C O doub N N 51 ASN C OXT sing N N 52 ASN CB CG sing N N 53 ASN CB HB2 sing N N 54 ASN CB HB3 sing N N 55 ASN CG OD1 doub N N 56 ASN CG ND2 sing N N 57 ASN ND2 HD21 sing N N 58 ASN ND2 HD22 sing N N 59 ASN OXT HXT sing N N 60 ASP N CA sing N N 61 ASP N H sing N N 62 ASP N H2 sing N N 63 ASP CA C sing N N 64 ASP CA CB sing N N 65 ASP CA HA sing N N 66 ASP C O doub N N 67 ASP C OXT sing N N 68 ASP CB CG sing N N 69 ASP CB HB2 sing N N 70 ASP CB HB3 sing N N 71 ASP CG OD1 doub N N 72 ASP CG OD2 sing N N 73 ASP OD2 HD2 sing N N 74 ASP OXT HXT sing N N 75 CYS N CA sing N N 76 CYS N H sing N N 77 CYS N H2 sing N N 78 CYS CA C sing N N 79 CYS CA CB sing N N 80 CYS CA HA sing N N 81 CYS C O doub N N 82 CYS C OXT sing N N 83 CYS CB SG sing N N 84 CYS CB HB2 sing N N 85 CYS CB HB3 sing N N 86 CYS SG HG sing N N 87 CYS OXT HXT sing N N 88 GLN N CA sing N N 89 GLN N H sing N N 90 GLN N H2 sing N N 91 GLN CA C sing N N 92 GLN CA CB sing N N 93 GLN CA HA sing N N 94 GLN C O doub N N 95 GLN C OXT sing N N 96 GLN CB CG sing N N 97 GLN CB HB2 sing N N 98 GLN CB HB3 sing N N 99 GLN CG CD sing N N 100 GLN CG HG2 sing N N 101 GLN CG HG3 sing N N 102 GLN CD OE1 doub N N 103 GLN CD NE2 sing N N 104 GLN NE2 HE21 sing N N 105 GLN NE2 HE22 sing N N 106 GLN OXT HXT sing N N 107 GLU N CA sing N N 108 GLU N H sing N N 109 GLU N H2 sing N N 110 GLU CA C sing N N 111 GLU CA CB sing N N 112 GLU CA HA sing N N 113 GLU C O doub N N 114 GLU C OXT sing N N 115 GLU CB CG sing N N 116 GLU CB HB2 sing N N 117 GLU CB HB3 sing N N 118 GLU CG CD sing N N 119 GLU CG HG2 sing N N 120 GLU CG HG3 sing N N 121 GLU CD OE1 doub N N 122 GLU CD OE2 sing N N 123 GLU OE2 HE2 sing N N 124 GLU OXT HXT sing N N 125 GLY N CA sing N N 126 GLY N H sing N N 127 GLY N H2 sing N N 128 GLY CA C sing N N 129 GLY CA HA2 sing N N 130 GLY CA HA3 sing N N 131 GLY C O doub N N 132 GLY C OXT sing N N 133 GLY OXT HXT sing N N 134 HOH O H1 sing N N 135 HOH O H2 sing N N 136 ILE N CA sing N N 137 ILE N H sing N N 138 ILE N H2 sing N N 139 ILE CA C sing N N 140 ILE CA CB sing N N 141 ILE CA HA sing N N 142 ILE C O doub N N 143 ILE C OXT sing N N 144 ILE CB CG1 sing N N 145 ILE CB CG2 sing N N 146 ILE CB HB sing N N 147 ILE CG1 CD1 sing N N 148 ILE CG1 HG12 sing N N 149 ILE CG1 HG13 sing N N 150 ILE CG2 HG21 sing N N 151 ILE CG2 HG22 sing N N 152 ILE CG2 HG23 sing N N 153 ILE CD1 HD11 sing N N 154 ILE CD1 HD12 sing N N 155 ILE CD1 HD13 sing N N 156 ILE OXT HXT sing N N 157 LEU N CA sing N N 158 LEU N H sing N N 159 LEU N H2 sing N N 160 LEU CA C sing N N 161 LEU CA CB sing N N 162 LEU CA HA sing N N 163 LEU C O doub N N 164 LEU C OXT sing N N 165 LEU CB CG sing N N 166 LEU CB HB2 sing N N 167 LEU CB HB3 sing N N 168 LEU CG CD1 sing N N 169 LEU CG CD2 sing N N 170 LEU CG HG sing N N 171 LEU CD1 HD11 sing N N 172 LEU CD1 HD12 sing N N 173 LEU CD1 HD13 sing N N 174 LEU CD2 HD21 sing N N 175 LEU CD2 HD22 sing N N 176 LEU CD2 HD23 sing N N 177 LEU OXT HXT sing N N 178 LYS N CA sing N N 179 LYS N H sing N N 180 LYS N H2 sing N N 181 LYS CA C sing N N 182 LYS CA CB sing N N 183 LYS CA HA sing N N 184 LYS C O doub N N 185 LYS C OXT sing N N 186 LYS CB CG sing N N 187 LYS CB HB2 sing N N 188 LYS CB HB3 sing N N 189 LYS CG CD sing N N 190 LYS CG HG2 sing N N 191 LYS CG HG3 sing N N 192 LYS CD CE sing N N 193 LYS CD HD2 sing N N 194 LYS CD HD3 sing N N 195 LYS CE NZ sing N N 196 LYS CE HE2 sing N N 197 LYS CE HE3 sing N N 198 LYS NZ HZ1 sing N N 199 LYS NZ HZ2 sing N N 200 LYS NZ HZ3 sing N N 201 LYS OXT HXT sing N N 202 PHE N CA sing N N 203 PHE N H sing N N 204 PHE N H2 sing N N 205 PHE CA C sing N N 206 PHE CA CB sing N N 207 PHE CA HA sing N N 208 PHE C O doub N N 209 PHE C OXT sing N N 210 PHE CB CG sing N N 211 PHE CB HB2 sing N N 212 PHE CB HB3 sing N N 213 PHE CG CD1 doub Y N 214 PHE CG CD2 sing Y N 215 PHE CD1 CE1 sing Y N 216 PHE CD1 HD1 sing N N 217 PHE CD2 CE2 doub Y N 218 PHE CD2 HD2 sing N N 219 PHE CE1 CZ doub Y N 220 PHE CE1 HE1 sing N N 221 PHE CE2 CZ sing Y N 222 PHE CE2 HE2 sing N N 223 PHE CZ HZ sing N N 224 PHE OXT HXT sing N N 225 PRO N CA sing N N 226 PRO N CD sing N N 227 PRO N H sing N N 228 PRO CA C sing N N 229 PRO CA CB sing N N 230 PRO CA HA sing N N 231 PRO C O doub N N 232 PRO C OXT sing N N 233 PRO CB CG sing N N 234 PRO CB HB2 sing N N 235 PRO CB HB3 sing N N 236 PRO CG CD sing N N 237 PRO CG HG2 sing N N 238 PRO CG HG3 sing N N 239 PRO CD HD2 sing N N 240 PRO CD HD3 sing N N 241 PRO OXT HXT sing N N 242 SCN S C sing N N 243 SCN C N trip N N 244 SER N CA sing N N 245 SER N H sing N N 246 SER N H2 sing N N 247 SER CA C sing N N 248 SER CA CB sing N N 249 SER CA HA sing N N 250 SER C O doub N N 251 SER C OXT sing N N 252 SER CB OG sing N N 253 SER CB HB2 sing N N 254 SER CB HB3 sing N N 255 SER OG HG sing N N 256 SER OXT HXT sing N N 257 THR N CA sing N N 258 THR N H sing N N 259 THR N H2 sing N N 260 THR CA C sing N N 261 THR CA CB sing N N 262 THR CA HA sing N N 263 THR C O doub N N 264 THR C OXT sing N N 265 THR CB OG1 sing N N 266 THR CB CG2 sing N N 267 THR CB HB sing N N 268 THR OG1 HG1 sing N N 269 THR CG2 HG21 sing N N 270 THR CG2 HG22 sing N N 271 THR CG2 HG23 sing N N 272 THR OXT HXT sing N N 273 TRP N CA sing N N 274 TRP N H sing N N 275 TRP N H2 sing N N 276 TRP CA C sing N N 277 TRP CA CB sing N N 278 TRP CA HA sing N N 279 TRP C O doub N N 280 TRP C OXT sing N N 281 TRP CB CG sing N N 282 TRP CB HB2 sing N N 283 TRP CB HB3 sing N N 284 TRP CG CD1 doub Y N 285 TRP CG CD2 sing Y N 286 TRP CD1 NE1 sing Y N 287 TRP CD1 HD1 sing N N 288 TRP CD2 CE2 doub Y N 289 TRP CD2 CE3 sing Y N 290 TRP NE1 CE2 sing Y N 291 TRP NE1 HE1 sing N N 292 TRP CE2 CZ2 sing Y N 293 TRP CE3 CZ3 doub Y N 294 TRP CE3 HE3 sing N N 295 TRP CZ2 CH2 doub Y N 296 TRP CZ2 HZ2 sing N N 297 TRP CZ3 CH2 sing Y N 298 TRP CZ3 HZ3 sing N N 299 TRP CH2 HH2 sing N N 300 TRP OXT HXT sing N N 301 TYR N CA sing N N 302 TYR N H sing N N 303 TYR N H2 sing N N 304 TYR CA C sing N N 305 TYR CA CB sing N N 306 TYR CA HA sing N N 307 TYR C O doub N N 308 TYR C OXT sing N N 309 TYR CB CG sing N N 310 TYR CB HB2 sing N N 311 TYR CB HB3 sing N N 312 TYR CG CD1 doub Y N 313 TYR CG CD2 sing Y N 314 TYR CD1 CE1 sing Y N 315 TYR CD1 HD1 sing N N 316 TYR CD2 CE2 doub Y N 317 TYR CD2 HD2 sing N N 318 TYR CE1 CZ doub Y N 319 TYR CE1 HE1 sing N N 320 TYR CE2 CZ sing Y N 321 TYR CE2 HE2 sing N N 322 TYR CZ OH sing N N 323 TYR OH HH sing N N 324 TYR OXT HXT sing N N 325 VAL N CA sing N N 326 VAL N H sing N N 327 VAL N H2 sing N N 328 VAL CA C sing N N 329 VAL CA CB sing N N 330 VAL CA HA sing N N 331 VAL C O doub N N 332 VAL C OXT sing N N 333 VAL CB CG1 sing N N 334 VAL CB CG2 sing N N 335 VAL CB HB sing N N 336 VAL CG1 HG11 sing N N 337 VAL CG1 HG12 sing N N 338 VAL CG1 HG13 sing N N 339 VAL CG2 HG21 sing N N 340 VAL CG2 HG22 sing N N 341 VAL CG2 HG23 sing N N 342 VAL OXT HXT sing N N 343 # _pdbx_initial_refinement_model.accession_code ? _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type other _pdbx_initial_refinement_model.source_name ? _pdbx_initial_refinement_model.details 'RHO-DA1A (UNPUBLISHED)' # _atom_sites.entry_id 4DO8 _atom_sites.fract_transf_matrix[1][1] 0.030979 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.010072 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.008618 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.022765 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_