data_4DPV
#
_entry.id 4DPV
#
_audit_conform.dict_name mmcif_pdbx.dic
_audit_conform.dict_version 5.398
_audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
#
loop_
_database_2.database_id
_database_2.database_code
_database_2.pdbx_database_accession
_database_2.pdbx_DOI
PDB 4DPV pdb_00004dpv 10.2210/pdb4dpv/pdb
RCSB PDV006 ? ?
WWPDB D_1000179303 ? ?
#
loop_
_pdbx_audit_revision_history.ordinal
_pdbx_audit_revision_history.data_content_type
_pdbx_audit_revision_history.major_revision
_pdbx_audit_revision_history.minor_revision
_pdbx_audit_revision_history.revision_date
1 'Structure model' 1 0 1997-04-01
2 'Structure model' 1 1 2008-05-22
3 'Structure model' 1 2 2011-07-13
4 'Structure model' 2 0 2023-04-19
5 'Structure model' 2 1 2024-11-06
#
loop_
_pdbx_audit_revision_details.ordinal
_pdbx_audit_revision_details.revision_ordinal
_pdbx_audit_revision_details.data_content_type
_pdbx_audit_revision_details.provider
_pdbx_audit_revision_details.type
_pdbx_audit_revision_details.description
_pdbx_audit_revision_details.details
1 1 'Structure model' repository 'Initial release' ? ?
2 4 'Structure model' repository Remediation ?
'Coordinates and associated matrices have been transformed from the icosahedral point symmetry frame to the crystallographic frame'
#
loop_
_pdbx_audit_revision_group.ordinal
_pdbx_audit_revision_group.revision_ordinal
_pdbx_audit_revision_group.data_content_type
_pdbx_audit_revision_group.group
1 2 'Structure model' 'Version format compliance'
2 3 'Structure model' 'Version format compliance'
3 4 'Structure model' Advisory
4 4 'Structure model' 'Atomic model'
5 4 'Structure model' 'Data collection'
6 4 'Structure model' 'Database references'
7 4 'Structure model' 'Derived calculations'
8 4 'Structure model' Other
9 4 'Structure model' 'Refinement description'
10 5 'Structure model' 'Data collection'
11 5 'Structure model' 'Structure summary'
#
loop_
_pdbx_audit_revision_category.ordinal
_pdbx_audit_revision_category.revision_ordinal
_pdbx_audit_revision_category.data_content_type
_pdbx_audit_revision_category.category
1 4 'Structure model' atom_site
2 4 'Structure model' cell
3 4 'Structure model' database_2
4 4 'Structure model' database_PDB_matrix
5 4 'Structure model' pdbx_database_remark
6 4 'Structure model' pdbx_struct_conn_angle
7 4 'Structure model' pdbx_struct_oper_list
8 4 'Structure model' pdbx_validate_main_chain_plane
9 4 'Structure model' pdbx_validate_peptide_omega
10 4 'Structure model' pdbx_validate_rmsd_angle
11 4 'Structure model' pdbx_validate_rmsd_bond
12 4 'Structure model' pdbx_validate_torsion
13 4 'Structure model' struct_conn
14 4 'Structure model' struct_ncs_oper
15 4 'Structure model' struct_site
16 5 'Structure model' chem_comp_atom
17 5 'Structure model' chem_comp_bond
18 5 'Structure model' pdbx_entry_details
19 5 'Structure model' pdbx_modification_feature
#
loop_
_pdbx_audit_revision_item.ordinal
_pdbx_audit_revision_item.revision_ordinal
_pdbx_audit_revision_item.data_content_type
_pdbx_audit_revision_item.item
1 4 'Structure model' '_atom_site.Cartn_x'
2 4 'Structure model' '_atom_site.Cartn_y'
3 4 'Structure model' '_atom_site.Cartn_z'
4 4 'Structure model' '_cell.Z_PDB'
5 4 'Structure model' '_database_2.pdbx_DOI'
6 4 'Structure model' '_database_2.pdbx_database_accession'
7 4 'Structure model' '_database_PDB_matrix.origx[1][1]'
8 4 'Structure model' '_database_PDB_matrix.origx[1][2]'
9 4 'Structure model' '_database_PDB_matrix.origx[1][3]'
10 4 'Structure model' '_database_PDB_matrix.origx[2][1]'
11 4 'Structure model' '_database_PDB_matrix.origx[2][2]'
12 4 'Structure model' '_database_PDB_matrix.origx[2][3]'
13 4 'Structure model' '_database_PDB_matrix.origx[3][1]'
14 4 'Structure model' '_database_PDB_matrix.origx[3][2]'
15 4 'Structure model' '_database_PDB_matrix.origx[3][3]'
16 4 'Structure model' '_database_PDB_matrix.origx_vector[1]'
17 4 'Structure model' '_database_PDB_matrix.origx_vector[2]'
18 4 'Structure model' '_database_PDB_matrix.origx_vector[3]'
19 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_asym_id'
20 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id'
21 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id'
22 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id'
23 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id'
24 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id'
25 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id'
26 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_seq_id'
27 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id'
28 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_asym_id'
29 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id'
30 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id'
31 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id'
32 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id'
33 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id'
34 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id'
35 4 'Structure model' '_pdbx_struct_conn_angle.value'
36 4 'Structure model' '_pdbx_struct_oper_list.id'
37 4 'Structure model' '_pdbx_struct_oper_list.matrix[1][1]'
38 4 'Structure model' '_pdbx_struct_oper_list.matrix[1][2]'
39 4 'Structure model' '_pdbx_struct_oper_list.matrix[1][3]'
40 4 'Structure model' '_pdbx_struct_oper_list.matrix[2][1]'
41 4 'Structure model' '_pdbx_struct_oper_list.matrix[2][2]'
42 4 'Structure model' '_pdbx_struct_oper_list.matrix[2][3]'
43 4 'Structure model' '_pdbx_struct_oper_list.matrix[3][1]'
44 4 'Structure model' '_pdbx_struct_oper_list.matrix[3][2]'
45 4 'Structure model' '_pdbx_struct_oper_list.matrix[3][3]'
46 4 'Structure model' '_pdbx_struct_oper_list.name'
47 4 'Structure model' '_pdbx_struct_oper_list.symmetry_operation'
48 4 'Structure model' '_pdbx_struct_oper_list.type'
49 4 'Structure model' '_pdbx_struct_oper_list.vector[1]'
50 4 'Structure model' '_pdbx_struct_oper_list.vector[2]'
51 4 'Structure model' '_pdbx_struct_oper_list.vector[3]'
52 4 'Structure model' '_pdbx_validate_main_chain_plane.improper_torsion_angle'
53 4 'Structure model' '_pdbx_validate_peptide_omega.omega'
54 4 'Structure model' '_pdbx_validate_rmsd_angle.angle_deviation'
55 4 'Structure model' '_pdbx_validate_rmsd_angle.angle_standard_deviation'
56 4 'Structure model' '_pdbx_validate_rmsd_angle.angle_target_value'
57 4 'Structure model' '_pdbx_validate_rmsd_angle.angle_value'
58 4 'Structure model' '_pdbx_validate_rmsd_angle.auth_asym_id_1'
59 4 'Structure model' '_pdbx_validate_rmsd_angle.auth_asym_id_2'
60 4 'Structure model' '_pdbx_validate_rmsd_angle.auth_asym_id_3'
61 4 'Structure model' '_pdbx_validate_rmsd_angle.auth_atom_id_1'
62 4 'Structure model' '_pdbx_validate_rmsd_angle.auth_atom_id_2'
63 4 'Structure model' '_pdbx_validate_rmsd_angle.auth_atom_id_3'
64 4 'Structure model' '_pdbx_validate_rmsd_angle.auth_comp_id_1'
65 4 'Structure model' '_pdbx_validate_rmsd_angle.auth_comp_id_2'
66 4 'Structure model' '_pdbx_validate_rmsd_angle.auth_comp_id_3'
67 4 'Structure model' '_pdbx_validate_rmsd_angle.auth_seq_id_1'
68 4 'Structure model' '_pdbx_validate_rmsd_angle.auth_seq_id_2'
69 4 'Structure model' '_pdbx_validate_rmsd_angle.auth_seq_id_3'
70 4 'Structure model' '_pdbx_validate_rmsd_angle.linker_flag'
71 4 'Structure model' '_pdbx_validate_rmsd_bond.bond_deviation'
72 4 'Structure model' '_pdbx_validate_rmsd_bond.bond_value'
73 4 'Structure model' '_pdbx_validate_torsion.phi'
74 4 'Structure model' '_pdbx_validate_torsion.psi'
75 4 'Structure model' '_struct_conn.pdbx_dist_value'
76 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id'
77 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id'
78 4 'Structure model' '_struct_conn.ptnr1_label_asym_id'
79 4 'Structure model' '_struct_conn.ptnr1_label_atom_id'
80 4 'Structure model' '_struct_conn.ptnr1_label_comp_id'
81 4 'Structure model' '_struct_conn.ptnr1_label_seq_id'
82 4 'Structure model' '_struct_conn.ptnr2_auth_asym_id'
83 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id'
84 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id'
85 4 'Structure model' '_struct_conn.ptnr2_label_asym_id'
86 4 'Structure model' '_struct_conn.ptnr2_label_atom_id'
87 4 'Structure model' '_struct_conn.ptnr2_label_comp_id'
88 4 'Structure model' '_struct_conn.ptnr2_label_seq_id'
89 4 'Structure model' '_struct_site.pdbx_auth_asym_id'
90 4 'Structure model' '_struct_site.pdbx_auth_comp_id'
91 4 'Structure model' '_struct_site.pdbx_auth_seq_id'
92 5 'Structure model' '_pdbx_entry_details.has_protein_modification'
#
_pdbx_database_PDB_obs_spr.id SPRSDE
_pdbx_database_PDB_obs_spr.date 1997-04-01
_pdbx_database_PDB_obs_spr.pdb_id 4DPV
_pdbx_database_PDB_obs_spr.replace_pdb_id 3DPV
_pdbx_database_PDB_obs_spr.details ?
#
_pdbx_database_status.status_code REL
_pdbx_database_status.entry_id 4DPV
_pdbx_database_status.recvd_initial_deposition_date 1996-02-01
_pdbx_database_status.deposit_site ?
_pdbx_database_status.process_site NDB
_pdbx_database_status.status_code_sf REL
_pdbx_database_status.status_code_mr ?
_pdbx_database_status.SG_entry ?
_pdbx_database_status.pdb_format_compatible Y
_pdbx_database_status.status_code_cs ?
_pdbx_database_status.status_code_nmr_data ?
_pdbx_database_status.methods_development_category ?
#
loop_
_pdbx_database_related.db_name
_pdbx_database_related.db_id
_pdbx_database_related.details
_pdbx_database_related.content_type
PDB 2CAS 'EMPTY CANINE PARVOVIRUS (NO DNA)' unspecified
PDB 1FPV 'FELINE PANLEUKOPENIA VIRUS' unspecified
#
loop_
_audit_author.name
_audit_author.pdbx_ordinal
'Chapman, M.S.' 1
'Rossmann, M.G.' 2
#
loop_
_citation.id
_citation.title
_citation.journal_abbrev
_citation.journal_volume
_citation.page_first
_citation.page_last
_citation.year
_citation.journal_id_ASTM
_citation.country
_citation.journal_id_ISSN
_citation.journal_id_CSD
_citation.book_publisher
_citation.pdbx_database_id_PubMed
_citation.pdbx_database_id_DOI
primary 'Canine parvovirus capsid structure, analyzed at 2.9 A resolution.'
J.Mol.Biol. 264 497 520 1996 JMOBAK UK 0022-2836 0070 ? 8969301 10.1006/jmbi.1996.0657
1 'Structural Refinement of the DNA-Containing Capsid of Canine Parvovirus Using a New Restrained Real Space Method'
'Acta Crystallogr.,Sect.D' 52 129 ? 1996 ABCRE6 DK 0907-4449 0766 ? ? ?
2 'Single-Stranded DNA-Protein Interactions in Canine Parvovirus'
Structure 3 151 162 1995 STRUE6 UK 0969-2126 2005 ? ? ?
3 'Restrained Real-Space Macromolecular Atomic Refinement Using a New Resolution- Dependent Electron Density Function'
'Acta Crystallogr.,Sect.A' 51 69 ? 1995 ACACEQ DK 0108-7673 0621 ? ? ?
4 'Structure, Sequence, and Function Correlations Among Parvoviruses'
Virology 194 491 ? 1993 VIRLAX US 0042-6822 0922 ? ? ?
5 'Ab Initio Phase Determination for Spherical Viruses: Parameter Determination for Spherical-Shell Models'
'Acta Crystallogr.,Sect.A' 48 301 ? 1992 ACACEQ DK 0108-7673 0621 ? ? ?
6 'Structure Determination of Monoclinic Canine Parvovirus'
'Acta Crystallogr.,Sect.B' 48 75 ? 1992 ASBSDK DK 0108-7681 0622 ? ? ?
7 'The Three-Dimensional Structure of Canine Parvovirus and its Functional Implications'
Science 251 1456 ? 1991 SCIEAS US 0036-8075 0038 ? ? ?
8 'Preliminary X-Ray Crystallographic Analysis of Canine Parvovirus Crystals'
J.Mol.Biol. 200 209 ? 1988 JMOBAK UK 0022-2836 0070 ? ? ?
#
loop_
_citation_author.citation_id
_citation_author.name
_citation_author.ordinal
_citation_author.identifier_ORCID
primary 'Xie, Q.' 1 ?
primary 'Chapman, M.S.' 2 ?
1 'Chapman, M.S.' 3 ?
1 'Rossmann, M.G.' 4 ?
2 'Chapman, M.S.' 5 ?
2 'Rossmann, M.G.' 6 ?
3 'Chapman, M.S.' 7 ?
4 'Chapman, M.S.' 8 ?
4 'Rossmann, M.G.' 9 ?
5 'Chapman, M.S.' 10 ?
5 'Tsao, J.' 11 ?
5 'Rossmann, M.G.' 12 ?
6 'Tsao, J.' 13 ?
6 'Chapman, M.S.' 14 ?
6 'Wu, H.' 15 ?
6 'Agbandje, M.' 16 ?
6 'Keller, W.' 17 ?
6 'Rossmann, M.G.' 18 ?
7 'Tsao, J.' 19 ?
7 'Chapman, M.S.' 20 ?
7 'Agbandje, M.' 21 ?
7 'Keller, W.' 22 ?
7 'Smith, K.' 23 ?
7 'Wu, H.' 24 ?
7 'Luo, M.' 25 ?
7 'Smith, T.J.' 26 ?
7 'Rossmann, M.G.' 27 ?
7 'Compans, R.W.' 28 ?
7 'al., et' 29 ?
8 'Luo, M.' 30 ?
8 'Tsao, J.' 31 ?
8 'Rossmann, M.G.' 32 ?
8 'Basak, S.' 33 ?
8 'Compans, R.W.' 34 ?
#
loop_
_entity.id
_entity.type
_entity.src_method
_entity.pdbx_description
_entity.formula_weight
_entity.pdbx_number_of_molecules
_entity.pdbx_ec
_entity.pdbx_mutation
_entity.pdbx_fragment
_entity.details
1 polymer syn
;DNA (5'-D(*AP*TP*AP*CP*CP*TP*CP*TP*TP*GP*C)-3')
;
3284.160 1 ? ? ? ?
2 polymer nat 'PROTEIN (PARVOVIRUS COAT PROTEIN)' 64705.559 1 ? ? ? ?
3 non-polymer syn 'MAGNESIUM ION' 24.305 4 ? ? ? ?
#
_entity_keywords.entity_id 1
_entity_keywords.text 'PART OF SS-DNA GENOME'
#
loop_
_entity_poly.entity_id
_entity_poly.type
_entity_poly.nstd_linkage
_entity_poly.nstd_monomer
_entity_poly.pdbx_seq_one_letter_code
_entity_poly.pdbx_seq_one_letter_code_can
_entity_poly.pdbx_strand_id
_entity_poly.pdbx_target_identifier
1 polydeoxyribonucleotide no no '(DA)(DT)(DA)(DC)(DC)(DT)(DC)(DT)(DT)(DG)(DC)' ATACCTCTTGC N ?
2 'polypeptide(L)' no no
;MSDGAVQPDGGQPAVRNERATGSGNGSGGGGGGGSGGVGISTGTFNNQTEFKFLENGWVEITANSSRLVHLNMPESENYR
RVVVNNMDKTAVNGNMALDDIHAQIVTPWSLVDANAWGVWFNPGDWQLIVNTMSELHLVSFEQEIFNVVLKTVSESATQP
PTKVYNNDLTASLMVALDSNNTMPFTPAAMRSETLGFYPWKPTIPTPWRYYFQWDRTLIPSHTGTSGTPTNIYHGTDPDD
VQFYTIENSVPVHLLRTGDEFATGTFFFDCKPCRLTHTWQTNRALGLPPFLNSLPQSEGATNFGDIGVQQDKRRGVTQMG
NTNYITEATIMRPAEVGYSAPYYSFEASTQGPFKTPIAAGRGGAQTDENQAADGNPRYAFGRQHGQKTTTTGETPERFTY
IAHQDTGRYPEGDWIQNINFNLPVTNDNVLLPTDPIGGKTGINYTNIFNTYGPLTALNNVPPVYPNGQIWDKEFDTDLKP
RLHVNAPFVCQNNCPGQLFVKVAPNLTNEYDPDASANMSRIVTYSDFWWKGKLVFKAKLRASHTWNPIQQMSINVDNQFN
YVPSNIGGMKIVYEKSQLAPRKLY
;
;MSDGAVQPDGGQPAVRNERATGSGNGSGGGGGGGSGGVGISTGTFNNQTEFKFLENGWVEITANSSRLVHLNMPESENYR
RVVVNNMDKTAVNGNMALDDIHAQIVTPWSLVDANAWGVWFNPGDWQLIVNTMSELHLVSFEQEIFNVVLKTVSESATQP
PTKVYNNDLTASLMVALDSNNTMPFTPAAMRSETLGFYPWKPTIPTPWRYYFQWDRTLIPSHTGTSGTPTNIYHGTDPDD
VQFYTIENSVPVHLLRTGDEFATGTFFFDCKPCRLTHTWQTNRALGLPPFLNSLPQSEGATNFGDIGVQQDKRRGVTQMG
NTNYITEATIMRPAEVGYSAPYYSFEASTQGPFKTPIAAGRGGAQTDENQAADGNPRYAFGRQHGQKTTTTGETPERFTY
IAHQDTGRYPEGDWIQNINFNLPVTNDNVLLPTDPIGGKTGINYTNIFNTYGPLTALNNVPPVYPNGQIWDKEFDTDLKP
RLHVNAPFVCQNNCPGQLFVKVAPNLTNEYDPDASANMSRIVTYSDFWWKGKLVFKAKLRASHTWNPIQQMSINVDNQFN
YVPSNIGGMKIVYEKSQLAPRKLY
;
Z ?
#
_pdbx_entity_nonpoly.entity_id 3
_pdbx_entity_nonpoly.name 'MAGNESIUM ION'
_pdbx_entity_nonpoly.comp_id MG
#
loop_
_entity_poly_seq.entity_id
_entity_poly_seq.num
_entity_poly_seq.mon_id
_entity_poly_seq.hetero
1 1 DA n
1 2 DT n
1 3 DA n
1 4 DC n
1 5 DC n
1 6 DT n
1 7 DC n
1 8 DT n
1 9 DT n
1 10 DG n
1 11 DC n
2 1 MET n
2 2 SER n
2 3 ASP n
2 4 GLY n
2 5 ALA n
2 6 VAL n
2 7 GLN n
2 8 PRO n
2 9 ASP n
2 10 GLY n
2 11 GLY n
2 12 GLN n
2 13 PRO n
2 14 ALA n
2 15 VAL n
2 16 ARG n
2 17 ASN n
2 18 GLU n
2 19 ARG n
2 20 ALA n
2 21 THR n
2 22 GLY n
2 23 SER n
2 24 GLY n
2 25 ASN n
2 26 GLY n
2 27 SER n
2 28 GLY n
2 29 GLY n
2 30 GLY n
2 31 GLY n
2 32 GLY n
2 33 GLY n
2 34 GLY n
2 35 SER n
2 36 GLY n
2 37 GLY n
2 38 VAL n
2 39 GLY n
2 40 ILE n
2 41 SER n
2 42 THR n
2 43 GLY n
2 44 THR n
2 45 PHE n
2 46 ASN n
2 47 ASN n
2 48 GLN n
2 49 THR n
2 50 GLU n
2 51 PHE n
2 52 LYS n
2 53 PHE n
2 54 LEU n
2 55 GLU n
2 56 ASN n
2 57 GLY n
2 58 TRP n
2 59 VAL n
2 60 GLU n
2 61 ILE n
2 62 THR n
2 63 ALA n
2 64 ASN n
2 65 SER n
2 66 SER n
2 67 ARG n
2 68 LEU n
2 69 VAL n
2 70 HIS n
2 71 LEU n
2 72 ASN n
2 73 MET n
2 74 PRO n
2 75 GLU n
2 76 SER n
2 77 GLU n
2 78 ASN n
2 79 TYR n
2 80 ARG n
2 81 ARG n
2 82 VAL n
2 83 VAL n
2 84 VAL n
2 85 ASN n
2 86 ASN n
2 87 MET n
2 88 ASP n
2 89 LYS n
2 90 THR n
2 91 ALA n
2 92 VAL n
2 93 ASN n
2 94 GLY n
2 95 ASN n
2 96 MET n
2 97 ALA n
2 98 LEU n
2 99 ASP n
2 100 ASP n
2 101 ILE n
2 102 HIS n
2 103 ALA n
2 104 GLN n
2 105 ILE n
2 106 VAL n
2 107 THR n
2 108 PRO n
2 109 TRP n
2 110 SER n
2 111 LEU n
2 112 VAL n
2 113 ASP n
2 114 ALA n
2 115 ASN n
2 116 ALA n
2 117 TRP n
2 118 GLY n
2 119 VAL n
2 120 TRP n
2 121 PHE n
2 122 ASN n
2 123 PRO n
2 124 GLY n
2 125 ASP n
2 126 TRP n
2 127 GLN n
2 128 LEU n
2 129 ILE n
2 130 VAL n
2 131 ASN n
2 132 THR n
2 133 MET n
2 134 SER n
2 135 GLU n
2 136 LEU n
2 137 HIS n
2 138 LEU n
2 139 VAL n
2 140 SER n
2 141 PHE n
2 142 GLU n
2 143 GLN n
2 144 GLU n
2 145 ILE n
2 146 PHE n
2 147 ASN n
2 148 VAL n
2 149 VAL n
2 150 LEU n
2 151 LYS n
2 152 THR n
2 153 VAL n
2 154 SER n
2 155 GLU n
2 156 SER n
2 157 ALA n
2 158 THR n
2 159 GLN n
2 160 PRO n
2 161 PRO n
2 162 THR n
2 163 LYS n
2 164 VAL n
2 165 TYR n
2 166 ASN n
2 167 ASN n
2 168 ASP n
2 169 LEU n
2 170 THR n
2 171 ALA n
2 172 SER n
2 173 LEU n
2 174 MET n
2 175 VAL n
2 176 ALA n
2 177 LEU n
2 178 ASP n
2 179 SER n
2 180 ASN n
2 181 ASN n
2 182 THR n
2 183 MET n
2 184 PRO n
2 185 PHE n
2 186 THR n
2 187 PRO n
2 188 ALA n
2 189 ALA n
2 190 MET n
2 191 ARG n
2 192 SER n
2 193 GLU n
2 194 THR n
2 195 LEU n
2 196 GLY n
2 197 PHE n
2 198 TYR n
2 199 PRO n
2 200 TRP n
2 201 LYS n
2 202 PRO n
2 203 THR n
2 204 ILE n
2 205 PRO n
2 206 THR n
2 207 PRO n
2 208 TRP n
2 209 ARG n
2 210 TYR n
2 211 TYR n
2 212 PHE n
2 213 GLN n
2 214 TRP n
2 215 ASP n
2 216 ARG n
2 217 THR n
2 218 LEU n
2 219 ILE n
2 220 PRO n
2 221 SER n
2 222 HIS n
2 223 THR n
2 224 GLY n
2 225 THR n
2 226 SER n
2 227 GLY n
2 228 THR n
2 229 PRO n
2 230 THR n
2 231 ASN n
2 232 ILE n
2 233 TYR n
2 234 HIS n
2 235 GLY n
2 236 THR n
2 237 ASP n
2 238 PRO n
2 239 ASP n
2 240 ASP n
2 241 VAL n
2 242 GLN n
2 243 PHE n
2 244 TYR n
2 245 THR n
2 246 ILE n
2 247 GLU n
2 248 ASN n
2 249 SER n
2 250 VAL n
2 251 PRO n
2 252 VAL n
2 253 HIS n
2 254 LEU n
2 255 LEU n
2 256 ARG n
2 257 THR n
2 258 GLY n
2 259 ASP n
2 260 GLU n
2 261 PHE n
2 262 ALA n
2 263 THR n
2 264 GLY n
2 265 THR n
2 266 PHE n
2 267 PHE n
2 268 PHE n
2 269 ASP n
2 270 CYS n
2 271 LYS n
2 272 PRO n
2 273 CYS n
2 274 ARG n
2 275 LEU n
2 276 THR n
2 277 HIS n
2 278 THR n
2 279 TRP n
2 280 GLN n
2 281 THR n
2 282 ASN n
2 283 ARG n
2 284 ALA n
2 285 LEU n
2 286 GLY n
2 287 LEU n
2 288 PRO n
2 289 PRO n
2 290 PHE n
2 291 LEU n
2 292 ASN n
2 293 SER n
2 294 LEU n
2 295 PRO n
2 296 GLN n
2 297 SER n
2 298 GLU n
2 299 GLY n
2 300 ALA n
2 301 THR n
2 302 ASN n
2 303 PHE n
2 304 GLY n
2 305 ASP n
2 306 ILE n
2 307 GLY n
2 308 VAL n
2 309 GLN n
2 310 GLN n
2 311 ASP n
2 312 LYS n
2 313 ARG n
2 314 ARG n
2 315 GLY n
2 316 VAL n
2 317 THR n
2 318 GLN n
2 319 MET n
2 320 GLY n
2 321 ASN n
2 322 THR n
2 323 ASN n
2 324 TYR n
2 325 ILE n
2 326 THR n
2 327 GLU n
2 328 ALA n
2 329 THR n
2 330 ILE n
2 331 MET n
2 332 ARG n
2 333 PRO n
2 334 ALA n
2 335 GLU n
2 336 VAL n
2 337 GLY n
2 338 TYR n
2 339 SER n
2 340 ALA n
2 341 PRO n
2 342 TYR n
2 343 TYR n
2 344 SER n
2 345 PHE n
2 346 GLU n
2 347 ALA n
2 348 SER n
2 349 THR n
2 350 GLN n
2 351 GLY n
2 352 PRO n
2 353 PHE n
2 354 LYS n
2 355 THR n
2 356 PRO n
2 357 ILE n
2 358 ALA n
2 359 ALA n
2 360 GLY n
2 361 ARG n
2 362 GLY n
2 363 GLY n
2 364 ALA n
2 365 GLN n
2 366 THR n
2 367 ASP n
2 368 GLU n
2 369 ASN n
2 370 GLN n
2 371 ALA n
2 372 ALA n
2 373 ASP n
2 374 GLY n
2 375 ASN n
2 376 PRO n
2 377 ARG n
2 378 TYR n
2 379 ALA n
2 380 PHE n
2 381 GLY n
2 382 ARG n
2 383 GLN n
2 384 HIS n
2 385 GLY n
2 386 GLN n
2 387 LYS n
2 388 THR n
2 389 THR n
2 390 THR n
2 391 THR n
2 392 GLY n
2 393 GLU n
2 394 THR n
2 395 PRO n
2 396 GLU n
2 397 ARG n
2 398 PHE n
2 399 THR n
2 400 TYR n
2 401 ILE n
2 402 ALA n
2 403 HIS n
2 404 GLN n
2 405 ASP n
2 406 THR n
2 407 GLY n
2 408 ARG n
2 409 TYR n
2 410 PRO n
2 411 GLU n
2 412 GLY n
2 413 ASP n
2 414 TRP n
2 415 ILE n
2 416 GLN n
2 417 ASN n
2 418 ILE n
2 419 ASN n
2 420 PHE n
2 421 ASN n
2 422 LEU n
2 423 PRO n
2 424 VAL n
2 425 THR n
2 426 ASN n
2 427 ASP n
2 428 ASN n
2 429 VAL n
2 430 LEU n
2 431 LEU n
2 432 PRO n
2 433 THR n
2 434 ASP n
2 435 PRO n
2 436 ILE n
2 437 GLY n
2 438 GLY n
2 439 LYS n
2 440 THR n
2 441 GLY n
2 442 ILE n
2 443 ASN n
2 444 TYR n
2 445 THR n
2 446 ASN n
2 447 ILE n
2 448 PHE n
2 449 ASN n
2 450 THR n
2 451 TYR n
2 452 GLY n
2 453 PRO n
2 454 LEU n
2 455 THR n
2 456 ALA n
2 457 LEU n
2 458 ASN n
2 459 ASN n
2 460 VAL n
2 461 PRO n
2 462 PRO n
2 463 VAL n
2 464 TYR n
2 465 PRO n
2 466 ASN n
2 467 GLY n
2 468 GLN n
2 469 ILE n
2 470 TRP n
2 471 ASP n
2 472 LYS n
2 473 GLU n
2 474 PHE n
2 475 ASP n
2 476 THR n
2 477 ASP n
2 478 LEU n
2 479 LYS n
2 480 PRO n
2 481 ARG n
2 482 LEU n
2 483 HIS n
2 484 VAL n
2 485 ASN n
2 486 ALA n
2 487 PRO n
2 488 PHE n
2 489 VAL n
2 490 CYS n
2 491 GLN n
2 492 ASN n
2 493 ASN n
2 494 CYS n
2 495 PRO n
2 496 GLY n
2 497 GLN n
2 498 LEU n
2 499 PHE n
2 500 VAL n
2 501 LYS n
2 502 VAL n
2 503 ALA n
2 504 PRO n
2 505 ASN n
2 506 LEU n
2 507 THR n
2 508 ASN n
2 509 GLU n
2 510 TYR n
2 511 ASP n
2 512 PRO n
2 513 ASP n
2 514 ALA n
2 515 SER n
2 516 ALA n
2 517 ASN n
2 518 MET n
2 519 SER n
2 520 ARG n
2 521 ILE n
2 522 VAL n
2 523 THR n
2 524 TYR n
2 525 SER n
2 526 ASP n
2 527 PHE n
2 528 TRP n
2 529 TRP n
2 530 LYS n
2 531 GLY n
2 532 LYS n
2 533 LEU n
2 534 VAL n
2 535 PHE n
2 536 LYS n
2 537 ALA n
2 538 LYS n
2 539 LEU n
2 540 ARG n
2 541 ALA n
2 542 SER n
2 543 HIS n
2 544 THR n
2 545 TRP n
2 546 ASN n
2 547 PRO n
2 548 ILE n
2 549 GLN n
2 550 GLN n
2 551 MET n
2 552 SER n
2 553 ILE n
2 554 ASN n
2 555 VAL n
2 556 ASP n
2 557 ASN n
2 558 GLN n
2 559 PHE n
2 560 ASN n
2 561 TYR n
2 562 VAL n
2 563 PRO n
2 564 SER n
2 565 ASN n
2 566 ILE n
2 567 GLY n
2 568 GLY n
2 569 MET n
2 570 LYS n
2 571 ILE n
2 572 VAL n
2 573 TYR n
2 574 GLU n
2 575 LYS n
2 576 SER n
2 577 GLN n
2 578 LEU n
2 579 ALA n
2 580 PRO n
2 581 ARG n
2 582 LYS n
2 583 LEU n
2 584 TYR n
#
_entity_src_nat.entity_id 2
_entity_src_nat.pdbx_src_id 1
_entity_src_nat.pdbx_alt_source_flag sample
_entity_src_nat.pdbx_beg_seq_num ?
_entity_src_nat.pdbx_end_seq_num ?
_entity_src_nat.common_name ?
_entity_src_nat.pdbx_organism_scientific 'Canine parvovirus'
_entity_src_nat.pdbx_ncbi_taxonomy_id 10788
_entity_src_nat.genus Parvovirus
_entity_src_nat.species 'Feline panleukopenia virus'
_entity_src_nat.strain D
_entity_src_nat.tissue ?
_entity_src_nat.tissue_fraction ?
_entity_src_nat.pdbx_secretion ?
_entity_src_nat.pdbx_fragment ?
_entity_src_nat.pdbx_variant ?
_entity_src_nat.pdbx_cell_line 'CULTURED IN CANINE A72 CELL LINE'
_entity_src_nat.pdbx_atcc ?
_entity_src_nat.pdbx_cellular_location ?
_entity_src_nat.pdbx_organ ?
_entity_src_nat.pdbx_organelle ?
_entity_src_nat.pdbx_cell ?
_entity_src_nat.pdbx_plasmid_name ?
_entity_src_nat.pdbx_plasmid_details ?
_entity_src_nat.details ?
#
loop_
_chem_comp.id
_chem_comp.type
_chem_comp.mon_nstd_flag
_chem_comp.name
_chem_comp.pdbx_synonyms
_chem_comp.formula
_chem_comp.formula_weight
ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093
ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209
ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118
ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103
CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158
DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222
DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197
DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221
DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208
GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144
GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129
GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067
HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162
ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173
LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173
LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195
MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211
MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305
PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189
PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130
SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093
THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119
TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225
TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189
VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146
#
loop_
_pdbx_poly_seq_scheme.asym_id
_pdbx_poly_seq_scheme.entity_id
_pdbx_poly_seq_scheme.seq_id
_pdbx_poly_seq_scheme.mon_id
_pdbx_poly_seq_scheme.ndb_seq_num
_pdbx_poly_seq_scheme.pdb_seq_num
_pdbx_poly_seq_scheme.auth_seq_num
_pdbx_poly_seq_scheme.pdb_mon_id
_pdbx_poly_seq_scheme.auth_mon_id
_pdbx_poly_seq_scheme.pdb_strand_id
_pdbx_poly_seq_scheme.pdb_ins_code
_pdbx_poly_seq_scheme.hetero
A 1 1 DA 1 1 1 DA UNK N . n
A 1 2 DT 2 2 2 DT T N . n
A 1 3 DA 3 3 3 DA A N . n
A 1 4 DC 4 4 4 DC C N . n
A 1 5 DC 5 5 5 DC C N . n
A 1 6 DT 6 6 6 DT T N . n
A 1 7 DC 7 7 7 DC C N . n
A 1 8 DT 8 8 8 DT T N . n
A 1 9 DT 9 9 9 DT T N . n
A 1 10 DG 10 10 10 DG G N . n
A 1 11 DC 11 11 11 DC C N . n
B 2 1 MET 1 1 ? ? ? Z . n
B 2 2 SER 2 2 ? ? ? Z . n
B 2 3 ASP 3 3 ? ? ? Z . n
B 2 4 GLY 4 4 ? ? ? Z . n
B 2 5 ALA 5 5 ? ? ? Z . n
B 2 6 VAL 6 6 ? ? ? Z . n
B 2 7 GLN 7 7 ? ? ? Z . n
B 2 8 PRO 8 8 ? ? ? Z . n
B 2 9 ASP 9 9 ? ? ? Z . n
B 2 10 GLY 10 10 ? ? ? Z . n
B 2 11 GLY 11 11 ? ? ? Z . n
B 2 12 GLN 12 12 ? ? ? Z . n
B 2 13 PRO 13 13 ? ? ? Z . n
B 2 14 ALA 14 14 ? ? ? Z . n
B 2 15 VAL 15 15 ? ? ? Z . n
B 2 16 ARG 16 16 ? ? ? Z . n
B 2 17 ASN 17 17 ? ? ? Z . n
B 2 18 GLU 18 18 ? ? ? Z . n
B 2 19 ARG 19 19 ? ? ? Z . n
B 2 20 ALA 20 20 ? ? ? Z . n
B 2 21 THR 21 21 ? ? ? Z . n
B 2 22 GLY 22 22 22 GLY GLY Z . n
B 2 23 SER 23 23 23 SER SER Z . n
B 2 24 GLY 24 24 24 GLY GLY Z . n
B 2 25 ASN 25 25 25 ASN ASN Z . n
B 2 26 GLY 26 26 26 GLY GLY Z . n
B 2 27 SER 27 27 27 SER SER Z . n
B 2 28 GLY 28 28 28 GLY GLY Z . n
B 2 29 GLY 29 29 29 GLY GLY Z . n
B 2 30 GLY 30 30 30 GLY GLY Z . n
B 2 31 GLY 31 31 31 GLY GLY Z . n
B 2 32 GLY 32 32 32 GLY GLY Z . n
B 2 33 GLY 33 33 33 GLY GLY Z . n
B 2 34 GLY 34 34 34 GLY GLY Z . n
B 2 35 SER 35 35 35 SER SER Z . n
B 2 36 GLY 36 36 36 GLY GLY Z . n
B 2 37 GLY 37 37 37 GLY GLY Z . n
B 2 38 VAL 38 38 38 VAL VAL Z . n
B 2 39 GLY 39 39 39 GLY GLY Z . n
B 2 40 ILE 40 40 40 ILE ILE Z . n
B 2 41 SER 41 41 41 SER SER Z . n
B 2 42 THR 42 42 42 THR THR Z . n
B 2 43 GLY 43 43 43 GLY GLY Z . n
B 2 44 THR 44 44 44 THR THR Z . n
B 2 45 PHE 45 45 45 PHE PHE Z . n
B 2 46 ASN 46 46 46 ASN ASN Z . n
B 2 47 ASN 47 47 47 ASN ASN Z . n
B 2 48 GLN 48 48 48 GLN GLN Z . n
B 2 49 THR 49 49 49 THR THR Z . n
B 2 50 GLU 50 50 50 GLU GLU Z . n
B 2 51 PHE 51 51 51 PHE PHE Z . n
B 2 52 LYS 52 52 52 LYS LYS Z . n
B 2 53 PHE 53 53 53 PHE PHE Z . n
B 2 54 LEU 54 54 54 LEU LEU Z . n
B 2 55 GLU 55 55 55 GLU GLU Z . n
B 2 56 ASN 56 56 56 ASN ASN Z . n
B 2 57 GLY 57 57 57 GLY GLY Z . n
B 2 58 TRP 58 58 58 TRP TRP Z . n
B 2 59 VAL 59 59 59 VAL VAL Z . n
B 2 60 GLU 60 60 60 GLU GLU Z . n
B 2 61 ILE 61 61 61 ILE ILE Z . n
B 2 62 THR 62 62 62 THR THR Z . n
B 2 63 ALA 63 63 63 ALA ALA Z . n
B 2 64 ASN 64 64 64 ASN ASN Z . n
B 2 65 SER 65 65 65 SER SER Z . n
B 2 66 SER 66 66 66 SER SER Z . n
B 2 67 ARG 67 67 67 ARG ARG Z . n
B 2 68 LEU 68 68 68 LEU LEU Z . n
B 2 69 VAL 69 69 69 VAL VAL Z . n
B 2 70 HIS 70 70 70 HIS HIS Z . n
B 2 71 LEU 71 71 71 LEU LEU Z . n
B 2 72 ASN 72 72 72 ASN ASN Z . n
B 2 73 MET 73 73 73 MET MET Z . n
B 2 74 PRO 74 74 74 PRO PRO Z . n
B 2 75 GLU 75 75 75 GLU GLU Z . n
B 2 76 SER 76 76 76 SER SER Z . n
B 2 77 GLU 77 77 77 GLU GLU Z . n
B 2 78 ASN 78 78 78 ASN ASN Z . n
B 2 79 TYR 79 79 79 TYR TYR Z . n
B 2 80 ARG 80 80 80 ARG ARG Z . n
B 2 81 ARG 81 81 81 ARG ARG Z . n
B 2 82 VAL 82 82 82 VAL VAL Z . n
B 2 83 VAL 83 83 83 VAL VAL Z . n
B 2 84 VAL 84 84 84 VAL VAL Z . n
B 2 85 ASN 85 85 85 ASN ASN Z . n
B 2 86 ASN 86 86 86 ASN ASN Z . n
B 2 87 MET 87 87 87 MET MET Z . n
B 2 88 ASP 88 88 88 ASP ASP Z . n
B 2 89 LYS 89 89 89 LYS LYS Z . n
B 2 90 THR 90 90 90 THR THR Z . n
B 2 91 ALA 91 91 91 ALA ALA Z . n
B 2 92 VAL 92 92 92 VAL VAL Z . n
B 2 93 ASN 93 93 93 ASN ASN Z . n
B 2 94 GLY 94 94 94 GLY GLY Z . n
B 2 95 ASN 95 95 95 ASN ASN Z . n
B 2 96 MET 96 96 96 MET MET Z . n
B 2 97 ALA 97 97 97 ALA ALA Z . n
B 2 98 LEU 98 98 98 LEU LEU Z . n
B 2 99 ASP 99 99 99 ASP ASP Z . n
B 2 100 ASP 100 100 100 ASP ASP Z . n
B 2 101 ILE 101 101 101 ILE ILE Z . n
B 2 102 HIS 102 102 102 HIS HIS Z . n
B 2 103 ALA 103 103 103 ALA ALA Z . n
B 2 104 GLN 104 104 104 GLN GLN Z . n
B 2 105 ILE 105 105 105 ILE ILE Z . n
B 2 106 VAL 106 106 106 VAL VAL Z . n
B 2 107 THR 107 107 107 THR THR Z . n
B 2 108 PRO 108 108 108 PRO PRO Z . n
B 2 109 TRP 109 109 109 TRP TRP Z . n
B 2 110 SER 110 110 110 SER SER Z . n
B 2 111 LEU 111 111 111 LEU LEU Z . n
B 2 112 VAL 112 112 112 VAL VAL Z . n
B 2 113 ASP 113 113 113 ASP ASP Z . n
B 2 114 ALA 114 114 114 ALA ALA Z . n
B 2 115 ASN 115 115 115 ASN ASN Z . n
B 2 116 ALA 116 116 116 ALA ALA Z . n
B 2 117 TRP 117 117 117 TRP TRP Z . n
B 2 118 GLY 118 118 118 GLY GLY Z . n
B 2 119 VAL 119 119 119 VAL VAL Z . n
B 2 120 TRP 120 120 120 TRP TRP Z . n
B 2 121 PHE 121 121 121 PHE PHE Z . n
B 2 122 ASN 122 122 122 ASN ASN Z . n
B 2 123 PRO 123 123 123 PRO PRO Z . n
B 2 124 GLY 124 124 124 GLY GLY Z . n
B 2 125 ASP 125 125 125 ASP ASP Z . n
B 2 126 TRP 126 126 126 TRP TRP Z . n
B 2 127 GLN 127 127 127 GLN GLN Z . n
B 2 128 LEU 128 128 128 LEU LEU Z . n
B 2 129 ILE 129 129 129 ILE ILE Z . n
B 2 130 VAL 130 130 130 VAL VAL Z . n
B 2 131 ASN 131 131 131 ASN ASN Z . n
B 2 132 THR 132 132 132 THR THR Z . n
B 2 133 MET 133 133 133 MET MET Z . n
B 2 134 SER 134 134 134 SER SER Z . n
B 2 135 GLU 135 135 135 GLU GLU Z . n
B 2 136 LEU 136 136 136 LEU LEU Z . n
B 2 137 HIS 137 137 137 HIS HIS Z . n
B 2 138 LEU 138 138 138 LEU LEU Z . n
B 2 139 VAL 139 139 139 VAL VAL Z . n
B 2 140 SER 140 140 140 SER SER Z . n
B 2 141 PHE 141 141 141 PHE PHE Z . n
B 2 142 GLU 142 142 142 GLU GLU Z . n
B 2 143 GLN 143 143 143 GLN GLN Z . n
B 2 144 GLU 144 144 144 GLU GLU Z . n
B 2 145 ILE 145 145 145 ILE ILE Z . n
B 2 146 PHE 146 146 146 PHE PHE Z . n
B 2 147 ASN 147 147 147 ASN ASN Z . n
B 2 148 VAL 148 148 148 VAL VAL Z . n
B 2 149 VAL 149 149 149 VAL VAL Z . n
B 2 150 LEU 150 150 150 LEU LEU Z . n
B 2 151 LYS 151 151 151 LYS LYS Z . n
B 2 152 THR 152 152 152 THR THR Z . n
B 2 153 VAL 153 153 153 VAL VAL Z . n
B 2 154 SER 154 154 154 SER SER Z . n
B 2 155 GLU 155 155 155 GLU GLU Z . n
B 2 156 SER 156 156 ? ? ? Z . n
B 2 157 ALA 157 157 ? ? ? Z . n
B 2 158 THR 158 158 ? ? ? Z . n
B 2 159 GLN 159 159 ? ? ? Z . n
B 2 160 PRO 160 160 160 PRO PRO Z . n
B 2 161 PRO 161 161 161 PRO PRO Z . n
B 2 162 THR 162 162 162 THR THR Z . n
B 2 163 LYS 163 163 163 LYS LYS Z . n
B 2 164 VAL 164 164 164 VAL VAL Z . n
B 2 165 TYR 165 165 165 TYR TYR Z . n
B 2 166 ASN 166 166 166 ASN ASN Z . n
B 2 167 ASN 167 167 167 ASN ASN Z . n
B 2 168 ASP 168 168 168 ASP ASP Z . n
B 2 169 LEU 169 169 169 LEU LEU Z . n
B 2 170 THR 170 170 170 THR THR Z . n
B 2 171 ALA 171 171 171 ALA ALA Z . n
B 2 172 SER 172 172 172 SER SER Z . n
B 2 173 LEU 173 173 173 LEU LEU Z . n
B 2 174 MET 174 174 174 MET MET Z . n
B 2 175 VAL 175 175 175 VAL VAL Z . n
B 2 176 ALA 176 176 176 ALA ALA Z . n
B 2 177 LEU 177 177 177 LEU LEU Z . n
B 2 178 ASP 178 178 178 ASP ASP Z . n
B 2 179 SER 179 179 179 SER SER Z . n
B 2 180 ASN 180 180 180 ASN ASN Z . n
B 2 181 ASN 181 181 181 ASN ASN Z . n
B 2 182 THR 182 182 182 THR THR Z . n
B 2 183 MET 183 183 183 MET MET Z . n
B 2 184 PRO 184 184 184 PRO PRO Z . n
B 2 185 PHE 185 185 185 PHE PHE Z . n
B 2 186 THR 186 186 186 THR THR Z . n
B 2 187 PRO 187 187 187 PRO PRO Z . n
B 2 188 ALA 188 188 188 ALA ALA Z . n
B 2 189 ALA 189 189 189 ALA ALA Z . n
B 2 190 MET 190 190 190 MET MET Z . n
B 2 191 ARG 191 191 191 ARG ARG Z . n
B 2 192 SER 192 192 192 SER SER Z . n
B 2 193 GLU 193 193 193 GLU GLU Z . n
B 2 194 THR 194 194 194 THR THR Z . n
B 2 195 LEU 195 195 195 LEU LEU Z . n
B 2 196 GLY 196 196 196 GLY GLY Z . n
B 2 197 PHE 197 197 197 PHE PHE Z . n
B 2 198 TYR 198 198 198 TYR TYR Z . n
B 2 199 PRO 199 199 199 PRO PRO Z . n
B 2 200 TRP 200 200 200 TRP TRP Z . n
B 2 201 LYS 201 201 201 LYS LYS Z . n
B 2 202 PRO 202 202 202 PRO PRO Z . n
B 2 203 THR 203 203 203 THR THR Z . n
B 2 204 ILE 204 204 204 ILE ILE Z . n
B 2 205 PRO 205 205 205 PRO PRO Z . n
B 2 206 THR 206 206 206 THR THR Z . n
B 2 207 PRO 207 207 207 PRO PRO Z . n
B 2 208 TRP 208 208 208 TRP TRP Z . n
B 2 209 ARG 209 209 209 ARG ARG Z . n
B 2 210 TYR 210 210 210 TYR TYR Z . n
B 2 211 TYR 211 211 211 TYR TYR Z . n
B 2 212 PHE 212 212 212 PHE PHE Z . n
B 2 213 GLN 213 213 213 GLN GLN Z . n
B 2 214 TRP 214 214 214 TRP TRP Z . n
B 2 215 ASP 215 215 215 ASP ASP Z . n
B 2 216 ARG 216 216 216 ARG ARG Z . n
B 2 217 THR 217 217 217 THR THR Z . n
B 2 218 LEU 218 218 218 LEU LEU Z . n
B 2 219 ILE 219 219 219 ILE ILE Z . n
B 2 220 PRO 220 220 220 PRO PRO Z . n
B 2 221 SER 221 221 221 SER SER Z . n
B 2 222 HIS 222 222 222 HIS HIS Z . n
B 2 223 THR 223 223 223 THR THR Z . n
B 2 224 GLY 224 224 224 GLY GLY Z . n
B 2 225 THR 225 225 225 THR THR Z . n
B 2 226 SER 226 226 226 SER SER Z . n
B 2 227 GLY 227 227 227 GLY GLY Z . n
B 2 228 THR 228 228 228 THR THR Z . n
B 2 229 PRO 229 229 229 PRO PRO Z . n
B 2 230 THR 230 230 230 THR THR Z . n
B 2 231 ASN 231 231 231 ASN ASN Z . n
B 2 232 ILE 232 232 232 ILE ILE Z . n
B 2 233 TYR 233 233 233 TYR TYR Z . n
B 2 234 HIS 234 234 234 HIS HIS Z . n
B 2 235 GLY 235 235 235 GLY GLY Z . n
B 2 236 THR 236 236 236 THR THR Z . n
B 2 237 ASP 237 237 237 ASP ASP Z . n
B 2 238 PRO 238 238 238 PRO PRO Z . n
B 2 239 ASP 239 239 239 ASP ASP Z . n
B 2 240 ASP 240 240 240 ASP ASP Z . n
B 2 241 VAL 241 241 241 VAL VAL Z . n
B 2 242 GLN 242 242 242 GLN GLN Z . n
B 2 243 PHE 243 243 243 PHE PHE Z . n
B 2 244 TYR 244 244 244 TYR TYR Z . n
B 2 245 THR 245 245 245 THR THR Z . n
B 2 246 ILE 246 246 246 ILE ILE Z . n
B 2 247 GLU 247 247 247 GLU GLU Z . n
B 2 248 ASN 248 248 248 ASN ASN Z . n
B 2 249 SER 249 249 249 SER SER Z . n
B 2 250 VAL 250 250 250 VAL VAL Z . n
B 2 251 PRO 251 251 251 PRO PRO Z . n
B 2 252 VAL 252 252 252 VAL VAL Z . n
B 2 253 HIS 253 253 253 HIS HIS Z . n
B 2 254 LEU 254 254 254 LEU LEU Z . n
B 2 255 LEU 255 255 255 LEU LEU Z . n
B 2 256 ARG 256 256 256 ARG ARG Z . n
B 2 257 THR 257 257 257 THR THR Z . n
B 2 258 GLY 258 258 258 GLY GLY Z . n
B 2 259 ASP 259 259 259 ASP ASP Z . n
B 2 260 GLU 260 260 260 GLU GLU Z . n
B 2 261 PHE 261 261 261 PHE PHE Z . n
B 2 262 ALA 262 262 262 ALA ALA Z . n
B 2 263 THR 263 263 263 THR THR Z . n
B 2 264 GLY 264 264 264 GLY GLY Z . n
B 2 265 THR 265 265 265 THR THR Z . n
B 2 266 PHE 266 266 266 PHE PHE Z . n
B 2 267 PHE 267 267 267 PHE PHE Z . n
B 2 268 PHE 268 268 268 PHE PHE Z . n
B 2 269 ASP 269 269 269 ASP ASP Z . n
B 2 270 CYS 270 270 270 CYS CYS Z . n
B 2 271 LYS 271 271 271 LYS LYS Z . n
B 2 272 PRO 272 272 272 PRO PRO Z . n
B 2 273 CYS 273 273 273 CYS CYS Z . n
B 2 274 ARG 274 274 274 ARG ARG Z . n
B 2 275 LEU 275 275 275 LEU LEU Z . n
B 2 276 THR 276 276 276 THR THR Z . n
B 2 277 HIS 277 277 277 HIS HIS Z . n
B 2 278 THR 278 278 278 THR THR Z . n
B 2 279 TRP 279 279 279 TRP TRP Z . n
B 2 280 GLN 280 280 280 GLN GLN Z . n
B 2 281 THR 281 281 281 THR THR Z . n
B 2 282 ASN 282 282 282 ASN ASN Z . n
B 2 283 ARG 283 283 283 ARG ARG Z . n
B 2 284 ALA 284 284 284 ALA ALA Z . n
B 2 285 LEU 285 285 285 LEU LEU Z . n
B 2 286 GLY 286 286 286 GLY GLY Z . n
B 2 287 LEU 287 287 287 LEU LEU Z . n
B 2 288 PRO 288 288 288 PRO PRO Z . n
B 2 289 PRO 289 289 289 PRO PRO Z . n
B 2 290 PHE 290 290 290 PHE PHE Z . n
B 2 291 LEU 291 291 291 LEU LEU Z . n
B 2 292 ASN 292 292 292 ASN ASN Z . n
B 2 293 SER 293 293 293 SER SER Z . n
B 2 294 LEU 294 294 294 LEU LEU Z . n
B 2 295 PRO 295 295 295 PRO PRO Z . n
B 2 296 GLN 296 296 296 GLN GLN Z . n
B 2 297 SER 297 297 297 SER SER Z . n
B 2 298 GLU 298 298 298 GLU GLU Z . n
B 2 299 GLY 299 299 299 GLY GLY Z . n
B 2 300 ALA 300 300 300 ALA ALA Z . n
B 2 301 THR 301 301 301 THR THR Z . n
B 2 302 ASN 302 302 302 ASN ASN Z . n
B 2 303 PHE 303 303 303 PHE PHE Z . n
B 2 304 GLY 304 304 304 GLY GLY Z . n
B 2 305 ASP 305 305 305 ASP ASP Z . n
B 2 306 ILE 306 306 306 ILE ILE Z . n
B 2 307 GLY 307 307 307 GLY GLY Z . n
B 2 308 VAL 308 308 308 VAL VAL Z . n
B 2 309 GLN 309 309 309 GLN GLN Z . n
B 2 310 GLN 310 310 310 GLN GLN Z . n
B 2 311 ASP 311 311 311 ASP ASP Z . n
B 2 312 LYS 312 312 312 LYS LYS Z . n
B 2 313 ARG 313 313 313 ARG ARG Z . n
B 2 314 ARG 314 314 314 ARG ARG Z . n
B 2 315 GLY 315 315 315 GLY GLY Z . n
B 2 316 VAL 316 316 316 VAL VAL Z . n
B 2 317 THR 317 317 317 THR THR Z . n
B 2 318 GLN 318 318 318 GLN GLN Z . n
B 2 319 MET 319 319 319 MET MET Z . n
B 2 320 GLY 320 320 320 GLY GLY Z . n
B 2 321 ASN 321 321 321 ASN ASN Z . n
B 2 322 THR 322 322 322 THR THR Z . n
B 2 323 ASN 323 323 323 ASN ASN Z . n
B 2 324 TYR 324 324 324 TYR TYR Z . n
B 2 325 ILE 325 325 325 ILE ILE Z . n
B 2 326 THR 326 326 326 THR THR Z . n
B 2 327 GLU 327 327 327 GLU GLU Z . n
B 2 328 ALA 328 328 328 ALA ALA Z . n
B 2 329 THR 329 329 329 THR THR Z . n
B 2 330 ILE 330 330 330 ILE ILE Z . n
B 2 331 MET 331 331 331 MET MET Z . n
B 2 332 ARG 332 332 332 ARG ARG Z . n
B 2 333 PRO 333 333 333 PRO PRO Z . n
B 2 334 ALA 334 334 334 ALA ALA Z . n
B 2 335 GLU 335 335 335 GLU GLU Z . n
B 2 336 VAL 336 336 336 VAL VAL Z . n
B 2 337 GLY 337 337 337 GLY GLY Z . n
B 2 338 TYR 338 338 338 TYR TYR Z . n
B 2 339 SER 339 339 339 SER SER Z . n
B 2 340 ALA 340 340 340 ALA ALA Z . n
B 2 341 PRO 341 341 341 PRO PRO Z . n
B 2 342 TYR 342 342 342 TYR TYR Z . n
B 2 343 TYR 343 343 343 TYR TYR Z . n
B 2 344 SER 344 344 344 SER SER Z . n
B 2 345 PHE 345 345 345 PHE PHE Z . n
B 2 346 GLU 346 346 346 GLU GLU Z . n
B 2 347 ALA 347 347 347 ALA ALA Z . n
B 2 348 SER 348 348 348 SER SER Z . n
B 2 349 THR 349 349 349 THR THR Z . n
B 2 350 GLN 350 350 350 GLN GLN Z . n
B 2 351 GLY 351 351 351 GLY GLY Z . n
B 2 352 PRO 352 352 352 PRO PRO Z . n
B 2 353 PHE 353 353 353 PHE PHE Z . n
B 2 354 LYS 354 354 354 LYS LYS Z . n
B 2 355 THR 355 355 355 THR THR Z . n
B 2 356 PRO 356 356 356 PRO PRO Z . n
B 2 357 ILE 357 357 357 ILE ILE Z . n
B 2 358 ALA 358 358 358 ALA ALA Z . n
B 2 359 ALA 359 359 359 ALA ALA Z . n
B 2 360 GLY 360 360 360 GLY GLY Z . n
B 2 361 ARG 361 361 361 ARG ARG Z . n
B 2 362 GLY 362 362 362 GLY GLY Z . n
B 2 363 GLY 363 363 363 GLY GLY Z . n
B 2 364 ALA 364 364 364 ALA ALA Z . n
B 2 365 GLN 365 365 365 GLN GLN Z . n
B 2 366 THR 366 366 366 THR THR Z . n
B 2 367 ASP 367 367 367 ASP ASP Z . n
B 2 368 GLU 368 368 368 GLU GLU Z . n
B 2 369 ASN 369 369 369 ASN ASN Z . n
B 2 370 GLN 370 370 370 GLN GLN Z . n
B 2 371 ALA 371 371 371 ALA ALA Z . n
B 2 372 ALA 372 372 372 ALA ALA Z . n
B 2 373 ASP 373 373 373 ASP ASP Z . n
B 2 374 GLY 374 374 374 GLY GLY Z . n
B 2 375 ASN 375 375 375 ASN ASN Z . n
B 2 376 PRO 376 376 376 PRO PRO Z . n
B 2 377 ARG 377 377 377 ARG ARG Z . n
B 2 378 TYR 378 378 378 TYR TYR Z . n
B 2 379 ALA 379 379 379 ALA ALA Z . n
B 2 380 PHE 380 380 380 PHE PHE Z . n
B 2 381 GLY 381 381 381 GLY GLY Z . n
B 2 382 ARG 382 382 382 ARG ARG Z . n
B 2 383 GLN 383 383 383 GLN GLN Z . n
B 2 384 HIS 384 384 384 HIS HIS Z . n
B 2 385 GLY 385 385 385 GLY GLY Z . n
B 2 386 GLN 386 386 386 GLN GLN Z . n
B 2 387 LYS 387 387 387 LYS LYS Z . n
B 2 388 THR 388 388 388 THR THR Z . n
B 2 389 THR 389 389 389 THR THR Z . n
B 2 390 THR 390 390 390 THR THR Z . n
B 2 391 THR 391 391 391 THR THR Z . n
B 2 392 GLY 392 392 392 GLY GLY Z . n
B 2 393 GLU 393 393 393 GLU GLU Z . n
B 2 394 THR 394 394 394 THR THR Z . n
B 2 395 PRO 395 395 395 PRO PRO Z . n
B 2 396 GLU 396 396 396 GLU GLU Z . n
B 2 397 ARG 397 397 397 ARG ARG Z . n
B 2 398 PHE 398 398 398 PHE PHE Z . n
B 2 399 THR 399 399 399 THR THR Z . n
B 2 400 TYR 400 400 400 TYR TYR Z . n
B 2 401 ILE 401 401 401 ILE ILE Z . n
B 2 402 ALA 402 402 402 ALA ALA Z . n
B 2 403 HIS 403 403 403 HIS HIS Z . n
B 2 404 GLN 404 404 404 GLN GLN Z . n
B 2 405 ASP 405 405 405 ASP ASP Z . n
B 2 406 THR 406 406 406 THR THR Z . n
B 2 407 GLY 407 407 407 GLY GLY Z . n
B 2 408 ARG 408 408 408 ARG ARG Z . n
B 2 409 TYR 409 409 409 TYR TYR Z . n
B 2 410 PRO 410 410 410 PRO PRO Z . n
B 2 411 GLU 411 411 411 GLU GLU Z . n
B 2 412 GLY 412 412 412 GLY GLY Z . n
B 2 413 ASP 413 413 413 ASP ASP Z . n
B 2 414 TRP 414 414 414 TRP TRP Z . n
B 2 415 ILE 415 415 415 ILE ILE Z . n
B 2 416 GLN 416 416 416 GLN GLN Z . n
B 2 417 ASN 417 417 417 ASN ASN Z . n
B 2 418 ILE 418 418 418 ILE ILE Z . n
B 2 419 ASN 419 419 419 ASN ASN Z . n
B 2 420 PHE 420 420 420 PHE PHE Z . n
B 2 421 ASN 421 421 421 ASN ASN Z . n
B 2 422 LEU 422 422 422 LEU LEU Z . n
B 2 423 PRO 423 423 423 PRO PRO Z . n
B 2 424 VAL 424 424 424 VAL VAL Z . n
B 2 425 THR 425 425 425 THR THR Z . n
B 2 426 ASN 426 426 426 ASN ASN Z . n
B 2 427 ASP 427 427 427 ASP ASP Z . n
B 2 428 ASN 428 428 428 ASN ASN Z . n
B 2 429 VAL 429 429 429 VAL VAL Z . n
B 2 430 LEU 430 430 430 LEU LEU Z . n
B 2 431 LEU 431 431 431 LEU LEU Z . n
B 2 432 PRO 432 432 432 PRO PRO Z . n
B 2 433 THR 433 433 433 THR THR Z . n
B 2 434 ASP 434 434 434 ASP ASP Z . n
B 2 435 PRO 435 435 435 PRO PRO Z . n
B 2 436 ILE 436 436 436 ILE ILE Z . n
B 2 437 GLY 437 437 437 GLY GLY Z . n
B 2 438 GLY 438 438 438 GLY GLY Z . n
B 2 439 LYS 439 439 439 LYS LYS Z . n
B 2 440 THR 440 440 440 THR THR Z . n
B 2 441 GLY 441 441 441 GLY GLY Z . n
B 2 442 ILE 442 442 442 ILE ILE Z . n
B 2 443 ASN 443 443 443 ASN ASN Z . n
B 2 444 TYR 444 444 444 TYR TYR Z . n
B 2 445 THR 445 445 445 THR THR Z . n
B 2 446 ASN 446 446 446 ASN ASN Z . n
B 2 447 ILE 447 447 447 ILE ILE Z . n
B 2 448 PHE 448 448 448 PHE PHE Z . n
B 2 449 ASN 449 449 449 ASN ASN Z . n
B 2 450 THR 450 450 450 THR THR Z . n
B 2 451 TYR 451 451 451 TYR TYR Z . n
B 2 452 GLY 452 452 452 GLY GLY Z . n
B 2 453 PRO 453 453 453 PRO PRO Z . n
B 2 454 LEU 454 454 454 LEU LEU Z . n
B 2 455 THR 455 455 455 THR THR Z . n
B 2 456 ALA 456 456 456 ALA ALA Z . n
B 2 457 LEU 457 457 457 LEU LEU Z . n
B 2 458 ASN 458 458 458 ASN ASN Z . n
B 2 459 ASN 459 459 459 ASN ASN Z . n
B 2 460 VAL 460 460 460 VAL VAL Z . n
B 2 461 PRO 461 461 461 PRO PRO Z . n
B 2 462 PRO 462 462 462 PRO PRO Z . n
B 2 463 VAL 463 463 463 VAL VAL Z . n
B 2 464 TYR 464 464 464 TYR TYR Z . n
B 2 465 PRO 465 465 465 PRO PRO Z . n
B 2 466 ASN 466 466 466 ASN ASN Z . n
B 2 467 GLY 467 467 467 GLY GLY Z . n
B 2 468 GLN 468 468 468 GLN GLN Z . n
B 2 469 ILE 469 469 469 ILE ILE Z . n
B 2 470 TRP 470 470 470 TRP TRP Z . n
B 2 471 ASP 471 471 471 ASP ASP Z . n
B 2 472 LYS 472 472 472 LYS LYS Z . n
B 2 473 GLU 473 473 473 GLU GLU Z . n
B 2 474 PHE 474 474 474 PHE PHE Z . n
B 2 475 ASP 475 475 475 ASP ASP Z . n
B 2 476 THR 476 476 476 THR THR Z . n
B 2 477 ASP 477 477 477 ASP ASP Z . n
B 2 478 LEU 478 478 478 LEU LEU Z . n
B 2 479 LYS 479 479 479 LYS LYS Z . n
B 2 480 PRO 480 480 480 PRO PRO Z . n
B 2 481 ARG 481 481 481 ARG ARG Z . n
B 2 482 LEU 482 482 482 LEU LEU Z . n
B 2 483 HIS 483 483 483 HIS HIS Z . n
B 2 484 VAL 484 484 484 VAL VAL Z . n
B 2 485 ASN 485 485 485 ASN ASN Z . n
B 2 486 ALA 486 486 486 ALA ALA Z . n
B 2 487 PRO 487 487 487 PRO PRO Z . n
B 2 488 PHE 488 488 488 PHE PHE Z . n
B 2 489 VAL 489 489 489 VAL VAL Z . n
B 2 490 CYS 490 490 490 CYS CYS Z . n
B 2 491 GLN 491 491 491 GLN GLN Z . n
B 2 492 ASN 492 492 492 ASN ASN Z . n
B 2 493 ASN 493 493 493 ASN ASN Z . n
B 2 494 CYS 494 494 494 CYS CYS Z . n
B 2 495 PRO 495 495 495 PRO PRO Z . n
B 2 496 GLY 496 496 496 GLY GLY Z . n
B 2 497 GLN 497 497 497 GLN GLN Z . n
B 2 498 LEU 498 498 498 LEU LEU Z . n
B 2 499 PHE 499 499 499 PHE PHE Z . n
B 2 500 VAL 500 500 500 VAL VAL Z . n
B 2 501 LYS 501 501 501 LYS LYS Z . n
B 2 502 VAL 502 502 502 VAL VAL Z . n
B 2 503 ALA 503 503 503 ALA ALA Z . n
B 2 504 PRO 504 504 504 PRO PRO Z . n
B 2 505 ASN 505 505 505 ASN ASN Z . n
B 2 506 LEU 506 506 506 LEU LEU Z . n
B 2 507 THR 507 507 507 THR THR Z . n
B 2 508 ASN 508 508 508 ASN ASN Z . n
B 2 509 GLU 509 509 509 GLU GLU Z . n
B 2 510 TYR 510 510 510 TYR TYR Z . n
B 2 511 ASP 511 511 511 ASP ASP Z . n
B 2 512 PRO 512 512 512 PRO PRO Z . n
B 2 513 ASP 513 513 513 ASP ASP Z . n
B 2 514 ALA 514 514 514 ALA ALA Z . n
B 2 515 SER 515 515 515 SER SER Z . n
B 2 516 ALA 516 516 516 ALA ALA Z . n
B 2 517 ASN 517 517 517 ASN ASN Z . n
B 2 518 MET 518 518 518 MET MET Z . n
B 2 519 SER 519 519 519 SER SER Z . n
B 2 520 ARG 520 520 520 ARG ARG Z . n
B 2 521 ILE 521 521 521 ILE ILE Z . n
B 2 522 VAL 522 522 522 VAL VAL Z . n
B 2 523 THR 523 523 523 THR THR Z . n
B 2 524 TYR 524 524 524 TYR TYR Z . n
B 2 525 SER 525 525 525 SER SER Z . n
B 2 526 ASP 526 526 526 ASP ASP Z . n
B 2 527 PHE 527 527 527 PHE PHE Z . n
B 2 528 TRP 528 528 528 TRP TRP Z . n
B 2 529 TRP 529 529 529 TRP TRP Z . n
B 2 530 LYS 530 530 530 LYS LYS Z . n
B 2 531 GLY 531 531 531 GLY GLY Z . n
B 2 532 LYS 532 532 532 LYS LYS Z . n
B 2 533 LEU 533 533 533 LEU LEU Z . n
B 2 534 VAL 534 534 534 VAL VAL Z . n
B 2 535 PHE 535 535 535 PHE PHE Z . n
B 2 536 LYS 536 536 536 LYS LYS Z . n
B 2 537 ALA 537 537 537 ALA ALA Z . n
B 2 538 LYS 538 538 538 LYS LYS Z . n
B 2 539 LEU 539 539 539 LEU LEU Z . n
B 2 540 ARG 540 540 540 ARG ARG Z . n
B 2 541 ALA 541 541 541 ALA ALA Z . n
B 2 542 SER 542 542 542 SER SER Z . n
B 2 543 HIS 543 543 543 HIS HIS Z . n
B 2 544 THR 544 544 544 THR THR Z . n
B 2 545 TRP 545 545 545 TRP TRP Z . n
B 2 546 ASN 546 546 546 ASN ASN Z . n
B 2 547 PRO 547 547 547 PRO PRO Z . n
B 2 548 ILE 548 548 548 ILE ILE Z . n
B 2 549 GLN 549 549 549 GLN GLN Z . n
B 2 550 GLN 550 550 550 GLN GLN Z . n
B 2 551 MET 551 551 551 MET MET Z . n
B 2 552 SER 552 552 552 SER SER Z . n
B 2 553 ILE 553 553 553 ILE ILE Z . n
B 2 554 ASN 554 554 554 ASN ASN Z . n
B 2 555 VAL 555 555 555 VAL VAL Z . n
B 2 556 ASP 556 556 556 ASP ASP Z . n
B 2 557 ASN 557 557 557 ASN ASN Z . n
B 2 558 GLN 558 558 558 GLN GLN Z . n
B 2 559 PHE 559 559 559 PHE PHE Z . n
B 2 560 ASN 560 560 560 ASN ASN Z . n
B 2 561 TYR 561 561 561 TYR TYR Z . n
B 2 562 VAL 562 562 562 VAL VAL Z . n
B 2 563 PRO 563 563 563 PRO PRO Z . n
B 2 564 SER 564 564 564 SER SER Z . n
B 2 565 ASN 565 565 565 ASN ASN Z . n
B 2 566 ILE 566 566 566 ILE ILE Z . n
B 2 567 GLY 567 567 567 GLY GLY Z . n
B 2 568 GLY 568 568 568 GLY GLY Z . n
B 2 569 MET 569 569 569 MET MET Z . n
B 2 570 LYS 570 570 570 LYS LYS Z . n
B 2 571 ILE 571 571 571 ILE ILE Z . n
B 2 572 VAL 572 572 572 VAL VAL Z . n
B 2 573 TYR 573 573 573 TYR TYR Z . n
B 2 574 GLU 574 574 574 GLU GLU Z . n
B 2 575 LYS 575 575 575 LYS LYS Z . n
B 2 576 SER 576 576 576 SER SER Z . n
B 2 577 GLN 577 577 577 GLN GLN Z . n
B 2 578 LEU 578 578 578 LEU LEU Z . n
B 2 579 ALA 579 579 579 ALA ALA Z . n
B 2 580 PRO 580 580 580 PRO PRO Z . n
B 2 581 ARG 581 581 581 ARG ARG Z . n
B 2 582 LYS 582 582 582 LYS LYS Z . n
B 2 583 LEU 583 583 583 LEU LEU Z . n
B 2 584 TYR 584 584 584 TYR TYR Z . n
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 MG 1 12 1 MG MG N .
D 3 MG 1 13 2 MG MG N .
E 3 MG 1 585 3 MG MG Z .
F 3 MG 1 586 4 MG MG Z .
#
loop_
_pdbx_unobs_or_zero_occ_atoms.id
_pdbx_unobs_or_zero_occ_atoms.PDB_model_num
_pdbx_unobs_or_zero_occ_atoms.polymer_flag
_pdbx_unobs_or_zero_occ_atoms.occupancy_flag
_pdbx_unobs_or_zero_occ_atoms.auth_asym_id
_pdbx_unobs_or_zero_occ_atoms.auth_comp_id
_pdbx_unobs_or_zero_occ_atoms.auth_seq_id
_pdbx_unobs_or_zero_occ_atoms.PDB_ins_code
_pdbx_unobs_or_zero_occ_atoms.auth_atom_id
_pdbx_unobs_or_zero_occ_atoms.label_alt_id
_pdbx_unobs_or_zero_occ_atoms.label_asym_id
_pdbx_unobs_or_zero_occ_atoms.label_comp_id
_pdbx_unobs_or_zero_occ_atoms.label_seq_id
_pdbx_unobs_or_zero_occ_atoms.label_atom_id
1 1 Y 1 N DA 1 ? N9 ? A DA 1 N9
2 1 Y 1 N DA 1 ? C8 ? A DA 1 C8
3 1 Y 1 N DA 1 ? N7 ? A DA 1 N7
4 1 Y 1 N DA 1 ? C5 ? A DA 1 C5
5 1 Y 1 N DA 1 ? C6 ? A DA 1 C6
6 1 Y 1 N DA 1 ? N6 ? A DA 1 N6
7 1 Y 1 N DA 1 ? C2 ? A DA 1 C2
8 1 Y 1 N DA 1 ? N3 ? A DA 1 N3
9 1 Y 1 N DA 1 ? C4 ? A DA 1 C4
#
loop_
_software.name
_software.classification
_software.version
_software.citation_id
_software.pdbx_ordinal
PURDUE 'data collection' SOFTWARE ? 1
TNT refinement . ? 2
PURDUE 'data reduction' 'DATA PROCESSING PACKAGE' ? 3
#
_cell.entry_id 4DPV
_cell.length_a 263.210
_cell.length_b 349.010
_cell.length_c 267.320
_cell.angle_alpha 90.00
_cell.angle_beta 90.82
_cell.angle_gamma 90.00
_cell.Z_PDB 120
_cell.pdbx_unique_axis ?
#
_symmetry.entry_id 4DPV
_symmetry.space_group_name_H-M 'P 1 21 1'
_symmetry.pdbx_full_space_group_name_H-M ?
_symmetry.cell_setting ?
_symmetry.Int_Tables_number 4
#
_exptl.entry_id 4DPV
_exptl.method 'X-RAY DIFFRACTION'
_exptl.crystals_number ?
#
_exptl_crystal.id 1
_exptl_crystal.density_meas ?
_exptl_crystal.density_Matthews ?
_exptl_crystal.density_percent_sol ?
_exptl_crystal.description ?
#
_diffrn.id 1
_diffrn.ambient_temp ?
_diffrn.ambient_temp_details ?
_diffrn.crystal_id 1
#
_diffrn_detector.diffrn_id 1
_diffrn_detector.detector FILM
_diffrn_detector.type ?
_diffrn_detector.pdbx_collection_date 1987-01-01
_diffrn_detector.details ?
#
_diffrn_radiation.diffrn_id 1
_diffrn_radiation.wavelength_id 1
_diffrn_radiation.pdbx_monochromatic_or_laue_m_l M
_diffrn_radiation.monochromator ?
_diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH'
_diffrn_radiation.pdbx_scattering_type x-ray
#
_diffrn_radiation_wavelength.id 1
_diffrn_radiation_wavelength.wavelength .
_diffrn_radiation_wavelength.wt 1.0
#
_diffrn_source.diffrn_id 1
_diffrn_source.source ?
_diffrn_source.type ?
_diffrn_source.pdbx_synchrotron_site ?
_diffrn_source.pdbx_synchrotron_beamline ?
_diffrn_source.pdbx_wavelength ?
_diffrn_source.pdbx_wavelength_list ?
#
_reflns.entry_id 4DPV
_reflns.observed_criterion_sigma_I 2.000
_reflns.observed_criterion_sigma_F 2.000
_reflns.d_resolution_low ?
_reflns.d_resolution_high 2.900
_reflns.number_obs 565088
_reflns.number_all ?
_reflns.percent_possible_obs 43.000
_reflns.pdbx_Rmerge_I_obs 0.122
_reflns.pdbx_Rsym_value ?
_reflns.pdbx_netI_over_sigmaI ?
_reflns.B_iso_Wilson_estimate ?
_reflns.pdbx_redundancy 1.660
_reflns.R_free_details ?
_reflns.pdbx_diffrn_id 1
_reflns.pdbx_ordinal 1
#
_refine.entry_id 4DPV
_refine.ls_number_reflns_obs 557776
_refine.ls_number_reflns_all ?
_refine.pdbx_ls_sigma_I ?
_refine.pdbx_ls_sigma_F 3.000
_refine.pdbx_data_cutoff_high_absF ?
_refine.pdbx_data_cutoff_low_absF ?
_refine.ls_d_res_low ?
_refine.ls_d_res_high 2.900
_refine.ls_percent_reflns_obs ?
_refine.ls_R_factor_obs ?
_refine.ls_R_factor_all ?
_refine.ls_R_factor_R_work ?
_refine.ls_R_factor_R_free 0.283
_refine.ls_R_factor_R_free_error ?
_refine.ls_R_factor_R_free_error_details ?
_refine.ls_percent_reflns_R_free ?
_refine.ls_number_reflns_R_free ?
_refine.ls_number_parameters ?
_refine.ls_number_restraints ?
_refine.occupancy_min ?
_refine.occupancy_max ?
_refine.B_iso_mean ?
_refine.aniso_B[1][1] ?
_refine.aniso_B[2][2] ?
_refine.aniso_B[3][3] ?
_refine.aniso_B[1][2] ?
_refine.aniso_B[1][3] ?
_refine.aniso_B[2][3] ?
_refine.solvent_model_details ?
_refine.solvent_model_param_ksol ?
_refine.solvent_model_param_bsol ?
_refine.pdbx_ls_cross_valid_method ?
_refine.details
;ELEVEN NUCLEOTIDES OF THE GENOMIC SINGLE-STRANDED DNA ARE
BOUND TO EACH OF THE 60 PROTOMERS OF THE CAPSID, TOGETHER
CONSTITUTING 13 PERCENT OF THE GENOME. THE ELECTRON
DENSITY IS THE AVERAGE OF UP TO 60 DIFFERENT REGIONS OF THE
DNA SEQUENCE. THUS, THE ELECTRON DENSITY FOR EACH BASE IS
EXPECTED TO BE BLURRED AS IT IS THE AVERAGE OF MANY BASES.
HOWEVER, FOR MANY OF THE NUCLEOTIDES, THE ELECTRON DENSITY
IS DISTINCTIVE FOR PURINE OR PYRIMIDINE, AND IN SOME CASES
FOR INDIVIDUAL BASE-TYPE. THIS SHOWS THAT THERE IS SOME
SEQUENCE PREFERENCE. THERE ARE 30+ REGIONS OF THE
ENCAPSIDATED GENOMIC SEQUENCE THAT SATISFY THIS PREFERENCE
(SEE *JRNL* REFERENCE), BUT THE HOMOLOGY BETWEEN THEM IS
WEAK. THE BASE-TYPES OF THE DNA MODEL WERE CHOSEN TO FIT
THE ELECTRON DENSITY AND STERIC CONSTRAINTS BEST, AND IS
THEREFORE SIMILAR TO THE CONSENSUS OF THE VIRAL SEQUENCES
THAT BIND. NOTE THAT THE SEQUENCE OF THE DNA IN THE
GENBANK ENTRY PVCPVC IS THE NEGATIVE OF THE SEQUENCE THAT
IS ENCAPSIDATED IN THE VIRION.
STRONG ELECTRON DENSITY BEGINS AT THE 37TH RESIDUE OF VP2.
DIFFUSE DENSITY CONNECTS GLY 37 ON THE INSIDE SURFACE TO
GLY 22 ON THE OUTER SURFACE, PASSING ALONG THE FIVE-FOLD
AXIS, SO THAT AT MOST ONE IN FIVE OF THE N-TERMINI ARE
EXTERNAL. AN OCCUPANCY FOR RESIDUES 24 TO 34 WAS OPTIMIZED
AGAINST THE ELECTRON DENSITY AND FREE R-FACTOR. 13% OF
N-TERMINI ARE EXTERNAL, MEANING THAT 65% OF FIVE-FOLD PORES
ARE OCCUPIED BY POLYPEPTIDES FROM ONE OF THE FIVE
SURROUNDING PROTEINS. N-TERMINI FROM THE INSIDE OF THE
CAPSID LIKELY JOIN AT RESIDUE 35, BUT THERE IS INADEQUATE
ELECTRON DENSITY FOR MODELING OF THE ALTERNATIVE N-TERMINAL
CONFORMATIONS. SEE CITATION IN *JRNL* RECORDS FOR
ADDITIONAL DETAILS.
REAL-SPACE R-FACTORS (CHAPMAN, MS (1995) ACTA CRYST A51:69)
- A MEASURE OF LOCAL RELATIVE RELIABILITY (LOW IS GOOD).
(5 BLOCKS, EACH WITH 3 COLUMNS: RESIDUE #; MAIN CHAIN R;
SIDE CHAIN R). FOR DETAILS SEE *JRNL* CITATION.
RESIDUE RESIDUE RESIDUE RESIDUE RESIDUE
MAIN CHAIN MAIN CHAIN MAIN CHAIN MAIN CHAIN MAIN
SIDE CHAIN SIDE CHAIN SIDE CHAIN SIDE CHAIN SIDE
NUCLEIC ACID: PROTEIN:
1 28% 24% 125 20% 26% 240 29% 28% 355 25% 39% 470 28% 26%
2 28% 35% 126 19% 23% 241 24% 34% 356 19% 21% 471 32% 34%
3 35% 37% 127 20% 35% 242 19% 31% 357 19% 27% 472 28% 32%
4 24% 26% 128 21% 37% 243 17% 25% 358 18% 473 23% 29%
5 20% 25% 129 18% 23% 244 19% 28% 359 18% 474 23% 36%
6 23% 29% 130 21% 34% 245 22% 25% 360 16% 475 19% 23%
7 34% 33% 131 24% 37% 246 23% 38% 361 19% 26% 476 23% 31%
8 24% 38% 132 22% 27% 247 20% 21% 362 24% 477 21% 23%
9 31% 32% 133 22% 33% 248 24% 32% 363 25% 478 22% 35%
10 28% 36% 134 21% 24% 249 25% 34% 364 25% 479 23% 42%
11 28% 35% 135 22% 24% 250 23% 31% 365 26% 32% 480 25% 31%
PROTEIN: 136 21% 35% 251 18% 23% 366 24% 31% 481 19% 32%
22 35% 137 20% 28% 252 15% 28% 367 20% 25% 482 21% 29%
23 33% 48% 138 24% 46% 253 20% 17% 368 24% 29% 483 21% 35%
24 42% 139 25% 33% 254 24% 39% 369 21% 27% 484 18% 24%
25 49% 82% 140 27% 26% 255 29% 48% 370 25% 27% 485 26% 29%
26 28% 141 26% 32% 256 30% 39% 371 28% 486 30%
27 22% 50% 142 24% 29% 257 23% 25% 372 26% 487 25% 29%
28 23% 143 20% 23% 258 30% 373 20% 32% 488 28% 33%
29 25% 144 22% 36% 259 30% 36% 374 23% 489 29% 43%
30 34% 145 18% 27% 260 25% 32% 375 27% 31% 490 32% 45%
31 47% 146 22% 35% 261 24% 28% 376 29% 32% 491 26% 38%
32 69% 147 25% 40% 262 30% 377 26% 35% 492 24% 33%
33 73% 148 25% 44% 263 23% 36% 378 26% 33% 493 31% 50%
34 53% 149 20% 27% 264 27% 379 26% 494 30% 38%
35 51% 58% 150 22% 35% 265 23% 34% 380 31% 40% 495 27% 34%
36 54% 151 25% 36% 266 27% 43% 381 31% 496 28%
37 35% 152 25% 34% 267 27% 34% 382 26% 36% 497 25% 40%
38 24% 31% 153 24% 41% 268 25% 44% 383 26% 33% 498 20% 19%
39 27% 154 23% 32% 269 26% 38% 384 32% 40% 499 19% 34%
40 29% 49% 155 24% 24% 270 22% 39% 385 28% 500 18% 19%
41 27% 45% 156 271 19% 38% 386 29% 53% 501 21% 31%
42 28% 39% 157 272 20% 22% 387 27% 38% 502 20% 34%
43 25% 158 273 20% 34% 388 23% 32% 503 20%
44 19% 18% 159 274 26% 34% 389 23% 39% 504 17% 21%
45 23% 34% 160 25% 27% 275 27% 37% 390 27% 35% 505 20% 35%
46 27% 29% 161 29% 28% 276 33% 38% 391 23% 27% 506 23% 35%
47 30% 41% 162 27% 32% 277 37% 38% 392 22% 507 20% 26%
48 26% 34% 163 24% 28% 278 30% 45% 393 22% 34% 508 22% 22%
49 21% 34% 164 25% 35% 279 27% 30% 394 24% 33% 509 21% 25%
50 20% 30% 165 24% 30% 280 25% 41% 395 31% 30% 510 23% 34%
51 21% 28% 166 22% 25% 281 22% 32% 396 32% 23% 511 23% 25%
52 22% 36% 167 23% 28% 282 24% 30% 397 25% 32% 512 25% 30%
53 23% 30% 168 19% 30% 283 28% 38% 398 27% 38% 513 22% 27%
54 24% 40% 169 20% 32% 284 28% 399 28% 42% 514 28%
55 25% 32% 170 25% 28% 285 28% 44% 400 29% 31% 515 24% 36%
56 27% 29% 171 29% 286 23% 401 24% 38% 516 21%
57 27% 172 25% 33% 287 23% 41% 402 32% 517 21% 24%
58 28% 33% 173 26% 30% 288 23% 25% 403 28% 29% 518 22% 38%
59 23% 33% 174 22% 37% 289 23% 31% 404 31% 39% 519 19% 29%
60 22% 26% 175 18% 24% 290 17% 21% 405 24% 28% 520 18% 27%
61 17% 33% 176 18% 291 18% 31% 406 18% 30% 521 20% 42%
62 20% 31% 177 22% 40% 292 14% 24% 407 19% 522 21% 28%
63 28% 178 25% 30% 293 18% 24% 408 21% 32% 523 19% 28%
64 32% 43% 179 34% 49% 294 21% 39% 409 24% 28% 524 21% 30%
65 35% 43% 180 32% 35% 295 22% 29% 410 26% 27% 525 19% 22%
66 30% 41% 181 28% 35% 296 15% 24% 411 23% 26% 526 20% 25%
67 22% 34% 182 25% 39% 297 20% 31% 412 24% 527 21% 26%
68 20% 27% 183 23% 39% 298 24% 30% 413 25% 37% 528 22% 21%
69 21% 30% 184 20% 23% 299 25% 414 21% 19% 529 22% 24%
70 24% 30% 185 27% 41% 300 24% 415 25% 34% 530 27% 34%
71 24% 41% 186 27% 35% 301 23% 24% 416 26% 33% 531 33%
72 22% 27% 187 27% 34% 302 27% 35% 417 20% 26% 532 29% 43%
73 20% 27% 188 29% 303 23% 32% 418 19% 30% 533 23% 36%
74 22% 27% 189 29% 304 21% 419 16% 22% 534 21% 27%
75 19% 30% 190 21% 41% 305 20% 23% 420 18% 30% 535 18% 27%
76 20% 27% 191 20% 28% 306 24% 41% 421 20% 25% 536 23% 46%
77 19% 32% 192 23% 34% 307 21% 422 20% 30% 537 28%
78 22% 20% 193 23% 22% 308 21% 28% 423 21% 20% 538 27% 41%
79 22% 27% 194 22% 33% 309 22% 30% 424 30% 43% 539 21% 37%
80 28% 40% 195 24% 38% 310 22% 32% 425 31% 40% 540 19% 29%
81 22% 22% 196 27% 311 20% 25% 426 30% 30% 541 21%
82 25% 37% 197 25% 39% 312 24% 38% 427 28% 30% 542 23% 29%
83 21% 28% 198 21% 30% 313 22% 35% 428 34% 33% 543 21% 26%
84 26% 39% 199 22% 23% 314 20% 27% 429 38% 51% 544 20% 28%
85 22% 29% 200 18% 23% 315 22% 430 34% 44% 545 20% 23%
86 22% 36% 201 20% 38% 316 22% 32% 431 28% 39% 546 23% 28%
87 26% 35% 202 17% 19% 317 23% 31% 432 25% 27% 547 25% 26%
88 23% 20% 203 19% 23% 318 20% 29% 433 19% 21% 548 27% 43%
89 27% 35% 204 21% 30% 319 25% 38% 434 25% 32% 549 26% 31%
90 28% 42% 205 20% 23% 320 21% 435 22% 20% 550 24% 35%
91 31% 206 22% 27% 321 22% 29% 436 19% 26% 551 25% 41%
92 28% 36% 207 21% 20% 322 21% 32% 437 19% 552 24% 22%
93 29% 46% 208 30% 33% 323 20% 24% 438 19% 553 24% 35%
94 29% 209 25% 22% 324 25% 28% 439 27% 38% 554 20% 23%
95 21% 28% 210 20% 25% 325 22% 33% 440 27% 27% 555 21% 27%
96 16% 33% 211 19% 29% 326 19% 28% 441 29% 556 21% 20%
97 13% 212 25% 31% 327 27% 37% 442 32% 41% 557 22% 28%
98 20% 34% 213 28% 39% 328 25% 443 23% 28% 558 25% 39%
99 26% 33% 214 29% 31% 329 24% 39% 444 16% 31% 559 18% 24%
100 27% 29% 215 34% 50% 330 24% 30% 445 23% 32% 560 21% 28%
101 25% 40% 216 34% 37% 331 22% 27% 446 24% 37% 561 22% 33%
102 25% 34% 217 25% 27% 332 21% 35% 447 19% 23% 562 24% 35%
103 32% 218 23% 39% 333 19% 23% 448 20% 39% 563 24% 26%
104 24% 28% 219 25% 27% 334 23% 449 21% 22% 564 25% 31%
105 24% 36% 220 22% 24% 335 24% 37% 450 24% 37% 565 27% 36%
106 26% 36% 221 34% 46% 336 24% 32% 451 26% 30% 566 28% 41%
107 29% 37% 222 31% 30% 337 25% 452 20% 567 29%
108 25% 29% 223 27% 36% 338 25% 20% 453 19% 18% 568 30%
109 28% 24% 224 27% 339 27% 38% 454 20% 29% 569 24% 27%
110 27% 36% 225 28% 39% 340 27% 455 22% 34% 570 22% 25%
111 29% 38% 226 21% 29% 341 26% 25% 456 21% 571 23% 39%
112 19% 22% 227 23% 342 24% 35% 457 20% 25% 572 18% 28%
113 18% 26% 228 20% 32% 343 21% 30% 458 20% 35% 573 22% 27%
114 18% 229 24% 33% 344 27% 36% 459 17% 25% 574 20% 28%
115 24% 29% 230 21% 22% 345 27% 30% 460 22% 36% 575 25% 31%
116 25% 231 26% 40% 346 31% 32% 461 22% 28% 576 28% 28%
117 24% 24% 232 25% 32% 347 31% 462 18% 24% 577 28% 49%
118 29% 233 16% 23% 348 23% 23% 463 21% 35% 578 24% 43%
119 27% 39% 234 19% 33% 349 30% 49% 464 22% 30% 579 31%
120 23% 29% 235 20% 350 32% 51% 465 28% 30% 580 29% 29%
121 27% 33% 236 24% 34% 351 29% 466 20% 33% 581 24% 41%
122 25% 25% 237 31% 26% 352 25% 24% 467 25% 582 21% 33%
123 25% 30% 238 28% 29% 353 27% 36% 468 28% 40% 583 24% 39%
124 22% 239 26% 22% 354 25% 35% 469 25% 29% 584 23% 28%
;
_refine.pdbx_starting_model ?
_refine.pdbx_method_to_determine_struct ?
_refine.pdbx_isotropic_thermal_model ?
_refine.pdbx_stereochemistry_target_values ?
_refine.pdbx_stereochem_target_val_spec_case ?
_refine.pdbx_R_Free_selection_details ?
_refine.ls_redundancy_reflns_obs ?
_refine.overall_SU_B ?
_refine.overall_SU_ML ?
_refine.pdbx_overall_ESU_R ?
_refine.pdbx_overall_ESU_R_Free ?
_refine.pdbx_data_cutoff_high_rms_absF ?
_refine.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine.pdbx_diffrn_id 1
_refine.pdbx_TLS_residual_ADP_flag ?
_refine.correlation_coeff_Fo_to_Fc ?
_refine.correlation_coeff_Fo_to_Fc_free ?
_refine.pdbx_solvent_vdw_probe_radii ?
_refine.pdbx_solvent_ion_probe_radii ?
_refine.pdbx_solvent_shrinkage_radii ?
_refine.pdbx_overall_phase_error ?
_refine.overall_SU_R_Cruickshank_DPI ?
_refine.pdbx_overall_SU_R_free_Cruickshank_DPI ?
_refine.pdbx_overall_SU_R_Blow_DPI ?
_refine.pdbx_overall_SU_R_free_Blow_DPI ?
#
_refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine_hist.cycle_id LAST
_refine_hist.pdbx_number_atoms_protein 4390
_refine_hist.pdbx_number_atoms_nucleic_acid 212
_refine_hist.pdbx_number_atoms_ligand 4
_refine_hist.number_atoms_solvent 0
_refine_hist.number_atoms_total 4606
_refine_hist.d_res_high 2.900
_refine_hist.d_res_low .
#
loop_
_refine_ls_restr.type
_refine_ls_restr.dev_ideal
_refine_ls_restr.dev_ideal_target
_refine_ls_restr.weight
_refine_ls_restr.number
_refine_ls_restr.pdbx_refine_id
_refine_ls_restr.pdbx_restraint_function
t_bond_d 0.018 ? ? ? 'X-RAY DIFFRACTION' ?
t_angle_deg 2.700 ? ? ? 'X-RAY DIFFRACTION' ?
t_dihedral_angle_d 15.40 ? ? ? 'X-RAY DIFFRACTION' ?
t_incorr_chiral_ct 0 ? ? ? 'X-RAY DIFFRACTION' ?
t_pseud_angle ? ? ? ? 'X-RAY DIFFRACTION' ?
t_trig_c_planes 0.016 ? ? ? 'X-RAY DIFFRACTION' ?
t_gen_planes 0.024 ? ? ? 'X-RAY DIFFRACTION' ?
t_it ? ? ? ? 'X-RAY DIFFRACTION' ?
t_nbd 0.110 ? ? 166 'X-RAY DIFFRACTION' ?
#
loop_
_struct_ncs_oper.id
_struct_ncs_oper.code
_struct_ncs_oper.details
_struct_ncs_oper.matrix[1][1]
_struct_ncs_oper.matrix[1][2]
_struct_ncs_oper.matrix[1][3]
_struct_ncs_oper.matrix[2][1]
_struct_ncs_oper.matrix[2][2]
_struct_ncs_oper.matrix[2][3]
_struct_ncs_oper.matrix[3][1]
_struct_ncs_oper.matrix[3][2]
_struct_ncs_oper.matrix[3][3]
_struct_ncs_oper.vector[1]
_struct_ncs_oper.vector[2]
_struct_ncs_oper.vector[3]
1 given ? 1.00000000 0.00000000 0.00000000 0.00000000 1.00000000 0.00000000 0.00000000 0.00000000 1.00000000 0.00000
0.00000 0.00000
2 generate ? 0.42068488 0.85725203 -0.29687292 -0.88228120 0.31042008 -0.35387133 -0.21120183 0.41079762 0.88692902
-57.82013 -81.56334 -21.39948
3 generate ? -0.51666147 0.50478652 -0.69155208 -0.57030188 -0.80534622 -0.16178213 -0.63860948 0.31081497 0.70397370
-145.71159 -48.29596 -61.67362
4 generate ? -0.51665825 -0.57030117 -0.63860429 0.50479313 -0.80534780 0.31080687 -0.69156009 -0.16177534 0.70397206
-142.21138 53.82775 -65.16492
5 generate ? 0.42069009 -0.88227640 -0.21120160 0.85725908 0.31041752 0.41079372 -0.29687772 -0.35386955 0.88692637
-52.15666 83.67629 -27.04852
6 generate ? 0.35568263 -0.05656871 -0.93289172 -0.05656156 -0.99763985 0.03892195 -0.93289526 0.03892701 -0.35804277
-104.14861 -1.15642 -151.27912
7 generate ? 0.39656825 -0.09588011 -0.91298324 0.84818390 -0.34218591 0.40434874 -0.35118021 -0.93472574 -0.05438234
-100.13689 82.65191 -92.85208
8 generate ? 0.44424723 -0.06485553 -0.89355249 0.57332314 0.78699149 0.22791560 0.68844039 -0.61354772 0.38679526
-95.70884 52.86678 4.85631
9 generate ? 0.43282882 -0.00636986 -0.90145210 -0.50129561 0.82940757 -0.24655290 0.74924621 0.55860396 0.35579759
-96.98388 -49.34977 6.81638
10 generate ? 0.37809289 -0.00124833 -0.92576508 -0.89058577 -0.27355525 -0.36335739 -0.25279433 0.96185553 -0.10453763
-102.19994 -82.73794 -89.68062
11 generate ? -0.35593434 0.03415219 0.93388505 0.03415087 -0.99818912 0.04951822 0.93388841 0.04952032 0.35412345
-27.66827 5.52497 18.87972
12 generate ? -0.37710627 0.08911386 0.92187154 0.88459191 -0.26024008 0.38701119 0.27439036 0.96142291 0.01931236
-29.85832 83.90633 -46.73493
13 generate ? -0.43196735 0.08309026 0.89805243 0.52000189 0.83651773 0.17273158 -0.73689228 0.54160014 -0.40455038
-35.04999 45.70333 -141.43035
14 generate ? -0.44470143 0.02440580 0.89534492 -0.55576816 0.77640230 -0.29719348 -0.70240128 -0.62976718 -0.33170088
-36.06856 -56.28880 -134.34069
15 generate ? -0.39771044 -0.00583958 0.91749069 -0.85604061 -0.35750889 -0.37334352 0.33019798 -0.93388923 0.13718534
-31.50640 -81.12039 -35.26362
16 generate ? -0.99974830 0.02241651 -0.00099333 0.02241069 0.99582897 -0.08844017 -0.00099315 -0.08844734 -0.99608068
-131.91501 -4.36855 -132.01220
17 generate ? -0.44014687 -0.85048577 0.28798462 -0.85049461 0.29200591 -0.43748860 0.28799168 -0.43749479 -0.85185904
-75.91654 -84.99490 -103.42511
18 generate ? 0.50438159 -0.52302125 0.68705214 -0.52302314 -0.81816301 -0.23886505 0.68706137 -0.23886739 -0.68621858 12.73855
-50.27414 -66.16394
19 generate ? 0.52853085 0.55226523 0.64471148 0.55227065 -0.80046207 0.23293951 0.64471516 0.23293855 -0.72806878 11.53194
51.81082 -71.72237
20 generate ? -0.40107254 0.88936431 0.21947599 0.88936730 0.32064662 0.32590719 0.21947407 0.32590325 -0.91957408
-77.86887 80.18204 -112.41884
21 generate ? -0.47008306 0.54249723 -0.69621191 -0.80262572 0.06541085 0.59289270 0.36718292 0.83750606 0.40467221
-142.94857 -13.72757 -15.14343
22 generate ? -0.52935070 -0.52057982 -0.66990983 -0.52058329 -0.42418877 0.74098456 -0.66991505 0.74098538 -0.04646052
-145.11762 14.65763 -113.34356
23 generate ? 0.37809413 -0.89058276 -0.25279432 -0.00124505 -0.27355309 0.96185605 -0.92576805 -0.36335516 -0.10454104
-57.71454 63.49938 -134.05200
24 generate ? 0.99819353 -0.05618011 -0.02130482 0.03768121 0.30914449 0.95027027 -0.04679593 -0.94935449 0.31069597 -1.52742
65.30005 -48.65039
25 generate ? 0.47399120 0.82951202 -0.29535196 -0.45759928 0.51863573 0.72223837 0.75229172 -0.20718145 0.62540706
-54.20494 17.57117 24.83915
26 generate ? 0.45160793 -0.54172632 0.70892528 -0.84228655 0.00322657 0.53902786 -0.29428685 -0.84054780 -0.45483450 10.70490
-19.90315 -115.57199
27 generate ? 0.51821325 0.51020390 0.68639765 -0.47102763 -0.49961889 0.72698972 0.71385937 -0.70004584 -0.01859435 13.60724
16.99988 -20.26517
28 generate ? -0.37710728 0.88458742 0.27439599 0.08910858 -0.26023547 0.96142445 0.92187428 0.38701059 0.01930877
-72.65840 69.42814 -4.04463
29 generate ? -0.99705111 0.06403894 0.04229258 0.06403289 0.39055707 0.91835120 0.04228836 0.91834646 -0.39350596
-128.87585 64.92756 -89.32659
30 generate ? -0.48487695 -0.81747142 0.31084645 -0.51160096 0.55338558 0.65729574 -0.70934056 0.15967365 -0.68654261
-77.35450 9.71778 -158.25429
31 generate ? -0.46433879 -0.59204584 -0.65868500 0.84161151 -0.06334359 -0.53636392 0.27582724 -0.80340983 0.52768237
-140.08919 20.03474 -13.03546
32 generate ? 0.46612608 -0.85242451 -0.23684919 0.52322114 0.48147303 -0.70315291 0.71342225 0.20382958 0.67043488
-50.85631 -11.98292 25.25284
33 generate ? 0.99819330 0.03768075 -0.04680003 -0.05617618 0.30913772 -0.94935642 -0.02130613 0.95026852 0.31070297 -3.21274
-66.45908 -46.96931
34 generate ? 0.39656405 0.84817475 -0.35117901 -0.09587305 -0.34218795 -0.93472956 -0.91298824 0.40435375 -0.05437610
-63.00028 -68.10953 -129.89334
35 generate ? -0.50733049 0.45898232 -0.72934472 0.45899025 -0.57239407 -0.67948615 -0.72934973 -0.67947907 0.07972455
-147.59458 -14.65341 -108.92107
36 generate ? 0.48281392 0.59127492 0.64597163 0.80330076 -0.00529383 -0.59555664 -0.34872331 0.80645157 -0.47752008 8.60098
13.59598 -120.66073
37 generate ? -0.45498862 0.86280043 0.22036137 0.46838979 0.44233464 -0.76482137 -0.75736657 -0.24476912 -0.60538000
-81.36520 -19.67458 -156.05570
38 generate ? -0.99918015 -0.03168541 0.02519836 -0.03168735 0.22465084 -0.97392407 0.02519990 -0.97392394 -0.22547070
-130.14620 -66.46845 -79.34566
39 generate ? -0.39770647 -0.85603358 0.33019125 -0.00584105 -0.35751361 -0.93389190 0.91749581 -0.37334571 0.13718610
-70.32834 -62.11808 3.45872
40 generate ? 0.51821623 -0.47102292 0.71385023 0.51020998 -0.49962724 -0.70004796 0.68639856 0.72698686 -0.01858899 15.42214
-12.63554 -22.07539
41 generate ? -0.47008127 -0.80261524 0.36718245 0.54250040 0.06540758 0.83750639 -0.69622165 0.59289312 0.40467370
-72.65500 91.13026 -85.25676
42 generate ? 0.43282664 -0.50128833 0.74924170 -0.00636905 0.82940903 0.55860918 -0.90145620 -0.24655249 0.35579832 12.13163
36.50576 -102.01928
43 generate ? 0.46611967 0.52321826 0.71342128 -0.85243064 0.48148066 0.20383342 -0.23684563 -0.70314889 0.67043365 11.95890
-42.72930 -37.40123
44 generate ? -0.41621202 0.85507125 0.30922378 -0.82645600 -0.49755234 0.26346715 0.37914085 -0.14589538 0.91376436
-72.93448 -37.07476 19.29746
45 generate ? -0.99481603 0.03566109 0.09523642 0.03565879 -0.75469965 0.65509858 0.09523086 0.65510264 0.74951567
-125.22874 45.65501 -10.27889
46 generate ? -0.46434534 0.84160616 0.27582855 -0.59204734 -0.06334013 -0.80341145 -0.65868707 -0.53635671 0.52768547
-78.31557 -92.14327 -74.65055
47 generate ? -0.99613185 -0.02349982 0.08467162 -0.02349959 -0.85723534 -0.51439185 0.08466961 -0.51438478 0.85336717
-126.01386 -35.55219 -4.11034
48 generate ? -0.41620696 -0.82644796 0.37913820 0.85507720 -0.49755908 -0.14590166 0.30921853 0.26346904 0.91376604
-68.31260 46.73326 14.68738
49 generate ? 0.47399284 -0.45759123 0.75228550 0.82951977 0.51862828 -0.20718179 -0.29535928 0.72223721 0.62541287 15.04704
40.99738 -44.23521
50 generate ? 0.44424168 0.57332291 0.68843662 -0.06485238 0.78699035 -0.61354518 -0.89355784 0.22791772 0.38680196 8.86486
-44.83303 -99.44909
51 generate ? 0.48281550 0.80329049 -0.34871803 0.59127673 -0.00528797 0.80645253 0.64597708 -0.59555739 -0.47752753
-57.15078 92.29348 -55.07767
52 generate ? -0.43196502 0.51999952 -0.73688446 0.08308240 0.83652046 0.54160336 0.89805656 0.17272501 -0.40455544
-143.12391 41.27942 -33.63365
53 generate ? -0.48487560 -0.51159499 -0.70933843 -0.81748239 0.55338468 0.15967822 0.31084964 0.65728770 -0.68654306
-144.79159 -43.34385 -90.99015
54 generate ? 0.39720438 -0.86586449 -0.30414760 -0.86586771 -0.46341129 0.18848466 -0.30414368 0.18848153 -0.93379310
-59.84914 -44.62985 -147.88243
55 generate ? 0.99527037 -0.05322058 -0.08127194 0.00479331 -0.80868997 0.58821316 -0.09702354 -0.58581932 -0.80461438 -5.68415
39.19863 -125.68729
56 generate ? 0.45161112 -0.84228140 -0.29429298 -0.54172979 0.00322052 -0.84054748 0.70893164 0.53902097 -0.45483164
-55.61053 -91.28048 -49.42662
57 generate ? 0.99527023 0.00478863 -0.09702885 -0.05321377 -0.80869415 -0.58582070 -0.08126997 0.58821226 -0.80461005 -6.72574
-42.23299 -124.64833
58 generate ? 0.43496289 0.81482468 -0.38322104 0.81483582 -0.53730626 -0.21760998 -0.38322254 -0.21760785 -0.89765662
-62.58660 39.33989 -150.70761
59 generate ? -0.45498520 0.46838447 -0.75736167 0.86280395 0.44233535 -0.24477002 0.22036211 -0.76482335 -0.60538413
-145.99530 40.70722 -91.59142
60 generate ? -0.44469603 -0.55576341 -0.70240110 0.02440029 0.77639927 -0.62976656 0.89535052 -0.29720103 -0.33170324
-141.68385 -40.02061 -28.99633
#
_database_PDB_matrix.entry_id 4DPV
_database_PDB_matrix.origx[1][1] -0.567479
_database_PDB_matrix.origx[1][2] -0.030091
_database_PDB_matrix.origx[1][3] -0.822835
_database_PDB_matrix.origx_vector[1] -91.807352
_database_PDB_matrix.origx[2][1] 0.011217
_database_PDB_matrix.origx[2][2] 0.998953
_database_PDB_matrix.origx[2][3] -0.044266
_database_PDB_matrix.origx_vector[2] -2.186548
_database_PDB_matrix.origx[3][1] 0.823312
_database_PDB_matrix.origx[3][2] -0.034354
_database_PDB_matrix.origx[3][3] -0.566549
_database_PDB_matrix.origx_vector[3] 16.832866
#
_struct.entry_id 4DPV
_struct.title 'PARVOVIRUS/DNA COMPLEX'
_struct.pdbx_model_details ?
_struct.pdbx_CASP_flag ?
_struct.pdbx_model_type_details ?
#
_struct_keywords.entry_id 4DPV
_struct_keywords.pdbx_keywords Virus/DNA
_struct_keywords.text
'COMPLEX (VIRUS-DNA), FULL CAPSID, SINGLE-STRANDED DNA, VIRUS, Icosahedral virus, Virus-DNA complex'
#
loop_
_struct_asym.id
_struct_asym.pdbx_blank_PDB_chainid_flag
_struct_asym.pdbx_modified
_struct_asym.entity_id
_struct_asym.details
A N N 1 ?
B N N 2 ?
C N N 3 ?
D N N 3 ?
E N N 3 ?
F N N 3 ?
#
loop_
_struct_ref.id
_struct_ref.db_name
_struct_ref.db_code
_struct_ref.pdbx_db_accession
_struct_ref.entity_id
_struct_ref.pdbx_align_begin
_struct_ref.pdbx_db_isoform
_struct_ref.pdbx_seq_one_letter_code
1 UNP COAT_PAVCD P17455 2 154 ? ?
2 PDB 4DPV 4DPV 1 ? ? ?
#
loop_
_struct_ref_seq.align_id
_struct_ref_seq.ref_id
_struct_ref_seq.pdbx_PDB_id_code
_struct_ref_seq.pdbx_strand_id
_struct_ref_seq.seq_align_beg
_struct_ref_seq.pdbx_seq_align_beg_ins_code
_struct_ref_seq.seq_align_end
_struct_ref_seq.pdbx_seq_align_end_ins_code
_struct_ref_seq.pdbx_db_accession
_struct_ref_seq.db_align_beg
_struct_ref_seq.pdbx_db_align_beg_ins_code
_struct_ref_seq.db_align_end
_struct_ref_seq.pdbx_db_align_end_ins_code
_struct_ref_seq.pdbx_auth_seq_align_beg
_struct_ref_seq.pdbx_auth_seq_align_end
1 1 4DPV Z 1 ? 584 ? P17455 154 ? 737 ? 1 584
2 2 4DPV N 1 ? 11 ? 4DPV 1 ? 11 ? 1 11
#
loop_
_pdbx_struct_assembly.id
_pdbx_struct_assembly.details
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
1 'complete icosahedral assembly' ? 120-MERIC 120
2 'icosahedral asymmetric unit' ? dimeric 2
3 'icosahedral pentamer' ? decameric 10
4 'icosahedral 23 hexamer' ? dodecameric 12
5 'icosahedral asymmetric unit, std point frame' ? dimeric 2
6 'crystal asymmetric unit, crystal frame' ? 120-meric 120
#
loop_
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
_pdbx_struct_assembly_gen.asym_id_list
1 '(1-60)' A,B,C,D,E,F
2 1 A,B,C,D,E,F
3 '(1-5)' A,B,C,D,E,F
4 '(1,2,6,10,23,24)' A,B,C,D,E,F
5 P A,B,C,D,E,F
6 '(X0)(1-60)' A,B,C,D,E,F
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[3]
X0 'identity operation' 1_555 x,y,z 1.00000000 0.00000000 0.00000000 0.00000 0.00000000 1.00000000 0.00000000
0.00000 0.00000000 0.00000000 1.00000000 0.00000
P 'transform to point frame' ? ? -0.01121701 -0.99895340 0.04426612 2.18655 -0.56747874 -0.03009110 -0.82283521
-91.80735 0.82331238 -0.03435444 -0.56654949 16.83287
1 'identity operation' 1_555 x,y,z 1.00000000 0.00000000 0.00000000 0.00000 0.00000000 1.00000000 0.00000000
0.00000 0.00000000 0.00000000 1.00000000 0.00000
2 'point symmetry operation' ? ? 0.42068488 0.85725203 -0.29687292 -57.82013 -0.88228120 0.31042008 -0.35387133
-81.56334 -0.21120183 0.41079762 0.88692902 -21.39948
3 'point symmetry operation' ? ? -0.51666147 0.50478652 -0.69155208 -145.71159 -0.57030188 -0.80534622 -0.16178213
-48.29596 -0.63860948 0.31081497 0.70397370 -61.67362
4 'point symmetry operation' ? ? -0.51665825 -0.57030117 -0.63860429 -142.21138 0.50479313 -0.80534780 0.31080687
53.82775 -0.69156009 -0.16177534 0.70397206 -65.16492
5 'point symmetry operation' ? ? 0.42069009 -0.88227640 -0.21120160 -52.15666 0.85725908 0.31041752 0.41079372
83.67629 -0.29687772 -0.35386955 0.88692637 -27.04852
6 'point symmetry operation' ? ? 0.35568263 -0.05656871 -0.93289172 -104.14861 -0.05656156 -0.99763985 0.03892195
-1.15642 -0.93289526 0.03892701 -0.35804277 -151.27912
7 'point symmetry operation' ? ? 0.39656825 -0.09588011 -0.91298324 -100.13689 0.84818390 -0.34218591 0.40434874
82.65191 -0.35118021 -0.93472574 -0.05438234 -92.85208
8 'point symmetry operation' ? ? 0.44424723 -0.06485553 -0.89355249 -95.70884 0.57332314 0.78699149 0.22791560
52.86678 0.68844039 -0.61354772 0.38679526 4.85631
9 'point symmetry operation' ? ? 0.43282882 -0.00636986 -0.90145210 -96.98388 -0.50129561 0.82940757 -0.24655290
-49.34977 0.74924621 0.55860396 0.35579759 6.81638
10 'point symmetry operation' ? ? 0.37809289 -0.00124833 -0.92576508 -102.19994 -0.89058577 -0.27355525 -0.36335739
-82.73794 -0.25279433 0.96185553 -0.10453763 -89.68062
11 'point symmetry operation' ? ? -0.35593434 0.03415219 0.93388505 -27.66827 0.03415087 -0.99818912 0.04951822
5.52497 0.93388841 0.04952032 0.35412345 18.87972
12 'point symmetry operation' ? ? -0.37710627 0.08911386 0.92187154 -29.85832 0.88459191 -0.26024008 0.38701119
83.90633 0.27439036 0.96142291 0.01931236 -46.73493
13 'point symmetry operation' ? ? -0.43196735 0.08309026 0.89805243 -35.04999 0.52000189 0.83651773 0.17273158
45.70333 -0.73689228 0.54160014 -0.40455038 -141.43035
14 'point symmetry operation' ? ? -0.44470143 0.02440580 0.89534492 -36.06856 -0.55576816 0.77640230 -0.29719348
-56.28880 -0.70240128 -0.62976718 -0.33170088 -134.34069
15 'point symmetry operation' ? ? -0.39771044 -0.00583958 0.91749069 -31.50640 -0.85604061 -0.35750889 -0.37334352
-81.12039 0.33019798 -0.93388923 0.13718534 -35.26362
16 'point symmetry operation' ? ? -0.99974830 0.02241651 -0.00099333 -131.91501 0.02241069 0.99582897 -0.08844017
-4.36855 -0.00099315 -0.08844734 -0.99608068 -132.01220
17 'point symmetry operation' ? ? -0.44014687 -0.85048577 0.28798462 -75.91654 -0.85049461 0.29200591 -0.43748860
-84.99490 0.28799168 -0.43749479 -0.85185904 -103.42511
18 'point symmetry operation' ? ? 0.50438159 -0.52302125 0.68705214 12.73855 -0.52302314 -0.81816301 -0.23886505
-50.27414 0.68706137 -0.23886739 -0.68621858 -66.16394
19 'point symmetry operation' ? ? 0.52853085 0.55226523 0.64471148 11.53194 0.55227065 -0.80046207 0.23293951
51.81082 0.64471516 0.23293855 -0.72806878 -71.72237
20 'point symmetry operation' ? ? -0.40107254 0.88936431 0.21947599 -77.86887 0.88936730 0.32064662 0.32590719
80.18204 0.21947407 0.32590325 -0.91957408 -112.41884
21 'point symmetry operation' ? ? -0.47008306 0.54249723 -0.69621191 -142.94857 -0.80262572 0.06541085 0.59289270
-13.72757 0.36718292 0.83750606 0.40467221 -15.14343
22 'point symmetry operation' ? ? -0.52935070 -0.52057982 -0.66990983 -145.11762 -0.52058329 -0.42418877 0.74098456
14.65763 -0.66991505 0.74098538 -0.04646052 -113.34356
23 'point symmetry operation' ? ? 0.37809413 -0.89058276 -0.25279432 -57.71454 -0.00124505 -0.27355309 0.96185605
63.49938 -0.92576805 -0.36335516 -0.10454104 -134.05200
24 'point symmetry operation' ? ? 0.99819353 -0.05618011 -0.02130482 -1.52742 0.03768121 0.30914449 0.95027027
65.30005 -0.04679593 -0.94935449 0.31069597 -48.65039
25 'point symmetry operation' ? ? 0.47399120 0.82951202 -0.29535196 -54.20494 -0.45759928 0.51863573 0.72223837
17.57117 0.75229172 -0.20718145 0.62540706 24.83915
26 'point symmetry operation' ? ? 0.45160793 -0.54172632 0.70892528 10.70490 -0.84228655 0.00322657 0.53902786
-19.90315 -0.29428685 -0.84054780 -0.45483450 -115.57199
27 'point symmetry operation' ? ? 0.51821325 0.51020390 0.68639765 13.60724 -0.47102763 -0.49961889 0.72698972
16.99988 0.71385937 -0.70004584 -0.01859435 -20.26517
28 'point symmetry operation' ? ? -0.37710728 0.88458742 0.27439599 -72.65840 0.08910858 -0.26023547 0.96142445
69.42814 0.92187428 0.38701059 0.01930877 -4.04463
29 'point symmetry operation' ? ? -0.99705111 0.06403894 0.04229258 -128.87585 0.06403289 0.39055707 0.91835120
64.92756 0.04228836 0.91834646 -0.39350596 -89.32659
30 'point symmetry operation' ? ? -0.48487695 -0.81747142 0.31084645 -77.35450 -0.51160096 0.55338558 0.65729574
9.71778 -0.70934056 0.15967365 -0.68654261 -158.25429
31 'point symmetry operation' ? ? -0.46433879 -0.59204584 -0.65868500 -140.08919 0.84161151 -0.06334359 -0.53636392
20.03474 0.27582724 -0.80340983 0.52768237 -13.03546
32 'point symmetry operation' ? ? 0.46612608 -0.85242451 -0.23684919 -50.85631 0.52322114 0.48147303 -0.70315291
-11.98292 0.71342225 0.20382958 0.67043488 25.25284
33 'point symmetry operation' ? ? 0.99819330 0.03768075 -0.04680003 -3.21274 -0.05617618 0.30913772 -0.94935642
-66.45908 -0.02130613 0.95026852 0.31070297 -46.96931
34 'point symmetry operation' ? ? 0.39656405 0.84817475 -0.35117901 -63.00028 -0.09587305 -0.34218795 -0.93472956
-68.10953 -0.91298824 0.40435375 -0.05437610 -129.89334
35 'point symmetry operation' ? ? -0.50733049 0.45898232 -0.72934472 -147.59458 0.45899025 -0.57239407 -0.67948615
-14.65341 -0.72934973 -0.67947907 0.07972455 -108.92107
36 'point symmetry operation' ? ? 0.48281392 0.59127492 0.64597163 8.60098 0.80330076 -0.00529383 -0.59555664
13.59598 -0.34872331 0.80645157 -0.47752008 -120.66073
37 'point symmetry operation' ? ? -0.45498862 0.86280043 0.22036137 -81.36520 0.46838979 0.44233464 -0.76482137
-19.67458 -0.75736657 -0.24476912 -0.60538000 -156.05570
38 'point symmetry operation' ? ? -0.99918015 -0.03168541 0.02519836 -130.14620 -0.03168735 0.22465084 -0.97392407
-66.46845 0.02519990 -0.97392394 -0.22547070 -79.34566
39 'point symmetry operation' ? ? -0.39770647 -0.85603358 0.33019125 -70.32834 -0.00584105 -0.35751361 -0.93389190
-62.11808 0.91749581 -0.37334571 0.13718610 3.45872
40 'point symmetry operation' ? ? 0.51821623 -0.47102292 0.71385023 15.42214 0.51020998 -0.49962724 -0.70004796
-12.63554 0.68639856 0.72698686 -0.01858899 -22.07539
41 'point symmetry operation' ? ? -0.47008127 -0.80261524 0.36718245 -72.65500 0.54250040 0.06540758 0.83750639
91.13026 -0.69622165 0.59289312 0.40467370 -85.25676
42 'point symmetry operation' ? ? 0.43282664 -0.50128833 0.74924170 12.13163 -0.00636905 0.82940903 0.55860918
36.50576 -0.90145620 -0.24655249 0.35579832 -102.01928
43 'point symmetry operation' ? ? 0.46611967 0.52321826 0.71342128 11.95890 -0.85243064 0.48148066 0.20383342
-42.72930 -0.23684563 -0.70314889 0.67043365 -37.40123
44 'point symmetry operation' ? ? -0.41621202 0.85507125 0.30922378 -72.93448 -0.82645600 -0.49755234 0.26346715
-37.07476 0.37914085 -0.14589538 0.91376436 19.29746
45 'point symmetry operation' ? ? -0.99481603 0.03566109 0.09523642 -125.22874 0.03565879 -0.75469965 0.65509858
45.65501 0.09523086 0.65510264 0.74951567 -10.27889
46 'point symmetry operation' ? ? -0.46434534 0.84160616 0.27582855 -78.31557 -0.59204734 -0.06334013 -0.80341145
-92.14327 -0.65868707 -0.53635671 0.52768547 -74.65055
47 'point symmetry operation' ? ? -0.99613185 -0.02349982 0.08467162 -126.01386 -0.02349959 -0.85723534 -0.51439185
-35.55219 0.08466961 -0.51438478 0.85336717 -4.11034
48 'point symmetry operation' ? ? -0.41620696 -0.82644796 0.37913820 -68.31260 0.85507720 -0.49755908 -0.14590166
46.73326 0.30921853 0.26346904 0.91376604 14.68738
49 'point symmetry operation' ? ? 0.47399284 -0.45759123 0.75228550 15.04704 0.82951977 0.51862828 -0.20718179
40.99738 -0.29535928 0.72223721 0.62541287 -44.23521
50 'point symmetry operation' ? ? 0.44424168 0.57332291 0.68843662 8.86486 -0.06485238 0.78699035 -0.61354518
-44.83303 -0.89355784 0.22791772 0.38680196 -99.44909
51 'point symmetry operation' ? ? 0.48281550 0.80329049 -0.34871803 -57.15078 0.59127673 -0.00528797 0.80645253
92.29348 0.64597708 -0.59555739 -0.47752753 -55.07767
52 'point symmetry operation' ? ? -0.43196502 0.51999952 -0.73688446 -143.12391 0.08308240 0.83652046 0.54160336
41.27942 0.89805656 0.17272501 -0.40455544 -33.63365
53 'point symmetry operation' ? ? -0.48487560 -0.51159499 -0.70933843 -144.79159 -0.81748239 0.55338468 0.15967822
-43.34385 0.31084964 0.65728770 -0.68654306 -90.99015
54 'point symmetry operation' ? ? 0.39720438 -0.86586449 -0.30414760 -59.84914 -0.86586771 -0.46341129 0.18848466
-44.62985 -0.30414368 0.18848153 -0.93379310 -147.88243
55 'point symmetry operation' ? ? 0.99527037 -0.05322058 -0.08127194 -5.68415 0.00479331 -0.80868997 0.58821316
39.19863 -0.09702354 -0.58581932 -0.80461438 -125.68729
56 'point symmetry operation' ? ? 0.45161112 -0.84228140 -0.29429298 -55.61053 -0.54172979 0.00322052 -0.84054748
-91.28048 0.70893164 0.53902097 -0.45483164 -49.42662
57 'point symmetry operation' ? ? 0.99527023 0.00478863 -0.09702885 -6.72574 -0.05321377 -0.80869415 -0.58582070
-42.23299 -0.08126997 0.58821226 -0.80461005 -124.64833
58 'point symmetry operation' ? ? 0.43496289 0.81482468 -0.38322104 -62.58660 0.81483582 -0.53730626 -0.21760998
39.33989 -0.38322254 -0.21760785 -0.89765662 -150.70761
59 'point symmetry operation' ? ? -0.45498520 0.46838447 -0.75736167 -145.99530 0.86280395 0.44233535 -0.24477002
40.70722 0.22036211 -0.76482335 -0.60538413 -91.59142
60 'point symmetry operation' ? ? -0.44469603 -0.55576341 -0.70240110 -141.68385 0.02440029 0.77639927 -0.62976656
-40.02061 0.89535052 -0.29720103 -0.33170324 -28.99633
#
_struct_biol.id 1
#
loop_
_struct_conf.conf_type_id
_struct_conf.id
_struct_conf.pdbx_PDB_helix_id
_struct_conf.beg_label_comp_id
_struct_conf.beg_label_asym_id
_struct_conf.beg_label_seq_id
_struct_conf.pdbx_beg_PDB_ins_code
_struct_conf.end_label_comp_id
_struct_conf.end_label_asym_id
_struct_conf.end_label_seq_id
_struct_conf.pdbx_end_PDB_ins_code
_struct_conf.beg_auth_comp_id
_struct_conf.beg_auth_asym_id
_struct_conf.beg_auth_seq_id
_struct_conf.end_auth_comp_id
_struct_conf.end_auth_asym_id
_struct_conf.end_auth_seq_id
_struct_conf.pdbx_PDB_helix_class
_struct_conf.details
_struct_conf.pdbx_PDB_helix_length
HELX_P HELX_P1 BC2 ASN B 86 ? THR B 90 ? ASN Z 86 THR Z 90 1 ? 5
HELX_P HELX_P2 CD1 ALA B 116 ? PHE B 121 ? ALA Z 116 PHE Z 121 1 ? 6
HELX_P HELX_P3 CD2 ASN B 122 ? MET B 133 ? ASN Z 122 MET Z 133 1 ? 12
HELX_P HELX_P4 EF1 PRO B 187 ? SER B 192 ? PRO Z 187 SER Z 192 5 ? 6
HELX_P HELX_P5 EF6 THR B 245 ? VAL B 250 ? THR Z 245 VAL Z 250 1 ? 6
HELX_P HELX_P6 GH5 GLY B 381 ? GLY B 385 ? GLY Z 381 GLY Z 385 5 ? 5
HELX_P HELX_P7 GH7 TYR B 409 ? ASP B 413 ? TYR Z 409 ASP Z 413 5 ? 5
HELX_P HELX_P8 G10 ASN B 443 ? ILE B 447 ? ASN Z 443 ILE Z 447 5 ? 5
HELX_P HELX_P9 I2 ASN B 557 ? VAL B 562 ? ASN Z 557 VAL Z 562 5 ? 6
#
_struct_conf_type.id HELX_P
_struct_conf_type.criteria ?
_struct_conf_type.reference ?
#
loop_
_struct_conn.id
_struct_conn.conn_type_id
_struct_conn.pdbx_leaving_atom_flag
_struct_conn.pdbx_PDB_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.details
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
_struct_conn.pdbx_role
disulf1 disulf ? ? B CYS 490 SG ? ? ? 1_555 B CYS 494 SG ? ? Z CYS 490 Z CYS 494 1_555 ? ? ? ? ? ? ? 2.092 ? ?
metalc1 metalc ? ? A DA 3 OP1 ? ? ? 1_555 D MG . MG ? ? N DA 3 N MG 13 1_555 ? ? ? ? ? ? ? 2.598 ? ?
metalc2 metalc ? ? A DC 4 OP1 ? ? ? 1_555 C MG . MG ? ? N DC 4 N MG 12 1_555 ? ? ? ? ? ? ? 2.011 ? ?
metalc3 metalc ? ? A DT 6 OP1 ? ? ? 1_555 C MG . MG ? ? N DT 6 N MG 12 1_555 ? ? ? ? ? ? ? 2.262 ? ?
metalc4 metalc ? ? A DC 7 OP2 ? ? ? 1_555 C MG . MG ? ? N DC 7 N MG 12 1_555 ? ? ? ? ? ? ? 2.417 ? ?
metalc5 metalc ? ? A DT 9 OP2 ? ? ? 1_555 C MG . MG ? ? N DT 9 N MG 12 1_555 ? ? ? ? ? ? ? 2.194 ? ?
metalc6 metalc ? ? A DT 9 OP1 ? ? ? 1_555 D MG . MG ? ? N DT 9 N MG 13 1_555 ? ? ? ? ? ? ? 2.199 ? ?
metalc7 metalc ? ? C MG . MG ? ? ? 1_555 B ASN 180 OD1 ? ? N MG 12 Z ASN 180 1_555 ? ? ? ? ? ? ? 2.098 ? ?
metalc8 metalc ? ? B ASP 237 OD2 ? ? ? 1_555 E MG . MG ? ? Z ASP 237 Z MG 585 1_555 ? ? ? ? ? ? ? 2.120 ? ?
metalc9 metalc ? ? B ASP 237 OD2 ? ? ? 1_555 F MG . MG ? ? Z ASP 237 Z MG 586 1_555 ? ? ? ? ? ? ? 3.021 ? ?
metalc10 metalc ? ? B ASP 237 OD1 ? ? ? 1_555 F MG . MG ? ? Z ASP 237 Z MG 586 1_555 ? ? ? ? ? ? ? 2.410 ? ?
metalc11 metalc ? ? B ASP 239 OD2 ? ? ? 1_555 F MG . MG ? ? Z ASP 239 Z MG 586 1_555 ? ? ? ? ? ? ? 1.771 ? ?
metalc12 metalc ? ? B ASP 240 OD2 ? ? ? 1_555 E MG . MG ? ? Z ASP 240 Z MG 585 1_555 ? ? ? ? ? ? ? 1.550 ? ?
metalc13 metalc ? ? B ASP 240 OD1 ? ? ? 1_555 E MG . MG ? ? Z ASP 240 Z MG 585 1_555 ? ? ? ? ? ? ? 3.125 ? ?
#
loop_
_struct_conn_type.id
_struct_conn_type.criteria
_struct_conn_type.reference
disulf ? ?
metalc ? ?
#
loop_
_pdbx_struct_conn_angle.id
_pdbx_struct_conn_angle.ptnr1_label_atom_id
_pdbx_struct_conn_angle.ptnr1_label_alt_id
_pdbx_struct_conn_angle.ptnr1_label_asym_id
_pdbx_struct_conn_angle.ptnr1_label_comp_id
_pdbx_struct_conn_angle.ptnr1_label_seq_id
_pdbx_struct_conn_angle.ptnr1_auth_atom_id
_pdbx_struct_conn_angle.ptnr1_auth_asym_id
_pdbx_struct_conn_angle.ptnr1_auth_comp_id
_pdbx_struct_conn_angle.ptnr1_auth_seq_id
_pdbx_struct_conn_angle.ptnr1_PDB_ins_code
_pdbx_struct_conn_angle.ptnr1_symmetry
_pdbx_struct_conn_angle.ptnr2_label_atom_id
_pdbx_struct_conn_angle.ptnr2_label_alt_id
_pdbx_struct_conn_angle.ptnr2_label_asym_id
_pdbx_struct_conn_angle.ptnr2_label_comp_id
_pdbx_struct_conn_angle.ptnr2_label_seq_id
_pdbx_struct_conn_angle.ptnr2_auth_atom_id
_pdbx_struct_conn_angle.ptnr2_auth_asym_id
_pdbx_struct_conn_angle.ptnr2_auth_comp_id
_pdbx_struct_conn_angle.ptnr2_auth_seq_id
_pdbx_struct_conn_angle.ptnr2_PDB_ins_code
_pdbx_struct_conn_angle.ptnr2_symmetry
_pdbx_struct_conn_angle.ptnr3_label_atom_id
_pdbx_struct_conn_angle.ptnr3_label_alt_id
_pdbx_struct_conn_angle.ptnr3_label_asym_id
_pdbx_struct_conn_angle.ptnr3_label_comp_id
_pdbx_struct_conn_angle.ptnr3_label_seq_id
_pdbx_struct_conn_angle.ptnr3_auth_atom_id
_pdbx_struct_conn_angle.ptnr3_auth_asym_id
_pdbx_struct_conn_angle.ptnr3_auth_comp_id
_pdbx_struct_conn_angle.ptnr3_auth_seq_id
_pdbx_struct_conn_angle.ptnr3_PDB_ins_code
_pdbx_struct_conn_angle.ptnr3_symmetry
_pdbx_struct_conn_angle.value
_pdbx_struct_conn_angle.value_esd
1 OP1 ? A DA 3 ? N DA 3 ? 1_555 MG ? D MG . ? N MG 13 ? 1_555 OP1 ? A DT 9 ? N DT 9 ? 1_555 78.5 ?
2 OP1 ? A DC 4 ? N DC 4 ? 1_555 MG ? C MG . ? N MG 12 ? 1_555 OP1 ? A DT 6 ? N DT 6 ? 1_555 107.5 ?
3 OP1 ? A DC 4 ? N DC 4 ? 1_555 MG ? C MG . ? N MG 12 ? 1_555 OP2 ? A DC 7 ? N DC 7 ? 1_555 155.0 ?
4 OP1 ? A DT 6 ? N DT 6 ? 1_555 MG ? C MG . ? N MG 12 ? 1_555 OP2 ? A DC 7 ? N DC 7 ? 1_555 80.3 ?
5 OP1 ? A DC 4 ? N DC 4 ? 1_555 MG ? C MG . ? N MG 12 ? 1_555 OP2 ? A DT 9 ? N DT 9 ? 1_555 91.3 ?
6 OP1 ? A DT 6 ? N DT 6 ? 1_555 MG ? C MG . ? N MG 12 ? 1_555 OP2 ? A DT 9 ? N DT 9 ? 1_555 140.6 ?
7 OP2 ? A DC 7 ? N DC 7 ? 1_555 MG ? C MG . ? N MG 12 ? 1_555 OP2 ? A DT 9 ? N DT 9 ? 1_555 69.8 ?
8 OP1 ? A DC 4 ? N DC 4 ? 1_555 MG ? C MG . ? N MG 12 ? 1_555 OD1 ? B ASN 180 ? Z ASN 180 ? 1_555 78.7 ?
9 OP1 ? A DT 6 ? N DT 6 ? 1_555 MG ? C MG . ? N MG 12 ? 1_555 OD1 ? B ASN 180 ? Z ASN 180 ? 1_555 71.5 ?
10 OP2 ? A DC 7 ? N DC 7 ? 1_555 MG ? C MG . ? N MG 12 ? 1_555 OD1 ? B ASN 180 ? Z ASN 180 ? 1_555 81.6 ?
11 OP2 ? A DT 9 ? N DT 9 ? 1_555 MG ? C MG . ? N MG 12 ? 1_555 OD1 ? B ASN 180 ? Z ASN 180 ? 1_555 79.1 ?
12 OD2 ? B ASP 237 ? Z ASP 237 ? 1_555 MG ? E MG . ? Z MG 585 ? 1_555 OD2 ? B ASP 240 ? Z ASP 240 ? 1_555 83.7 ?
13 OD2 ? B ASP 237 ? Z ASP 237 ? 1_555 MG ? E MG . ? Z MG 585 ? 1_555 OD1 ? B ASP 240 ? Z ASP 240 ? 1_555 79.0 ?
14 OD2 ? B ASP 240 ? Z ASP 240 ? 1_555 MG ? E MG . ? Z MG 585 ? 1_555 OD1 ? B ASP 240 ? Z ASP 240 ? 1_555 42.3 ?
15 OD2 ? B ASP 237 ? Z ASP 237 ? 1_555 MG ? F MG . ? Z MG 586 ? 1_555 OD1 ? B ASP 237 ? Z ASP 237 ? 1_555 48.6 ?
16 OD2 ? B ASP 237 ? Z ASP 237 ? 1_555 MG ? F MG . ? Z MG 586 ? 1_555 OD2 ? B ASP 239 ? Z ASP 239 ? 1_555 85.6 ?
17 OD1 ? B ASP 237 ? Z ASP 237 ? 1_555 MG ? F MG . ? Z MG 586 ? 1_555 OD2 ? B ASP 239 ? Z ASP 239 ? 1_555 66.5 ?
#
_pdbx_modification_feature.ordinal 1
_pdbx_modification_feature.label_comp_id CYS
_pdbx_modification_feature.label_asym_id B
_pdbx_modification_feature.label_seq_id 490
_pdbx_modification_feature.label_alt_id ?
_pdbx_modification_feature.modified_residue_label_comp_id CYS
_pdbx_modification_feature.modified_residue_label_asym_id B
_pdbx_modification_feature.modified_residue_label_seq_id 494
_pdbx_modification_feature.modified_residue_label_alt_id ?
_pdbx_modification_feature.auth_comp_id CYS
_pdbx_modification_feature.auth_asym_id Z
_pdbx_modification_feature.auth_seq_id 490
_pdbx_modification_feature.PDB_ins_code ?
_pdbx_modification_feature.symmetry 1_555
_pdbx_modification_feature.modified_residue_auth_comp_id CYS
_pdbx_modification_feature.modified_residue_auth_asym_id Z
_pdbx_modification_feature.modified_residue_auth_seq_id 494
_pdbx_modification_feature.modified_residue_PDB_ins_code ?
_pdbx_modification_feature.modified_residue_symmetry 1_555
_pdbx_modification_feature.comp_id_linking_atom SG
_pdbx_modification_feature.modified_residue_id_linking_atom SG
_pdbx_modification_feature.modified_residue_id .
_pdbx_modification_feature.ref_pcm_id .
_pdbx_modification_feature.ref_comp_id .
_pdbx_modification_feature.type None
_pdbx_modification_feature.category 'Disulfide bridge'
#
loop_
_struct_mon_prot_cis.pdbx_id
_struct_mon_prot_cis.label_comp_id
_struct_mon_prot_cis.label_seq_id
_struct_mon_prot_cis.label_asym_id
_struct_mon_prot_cis.label_alt_id
_struct_mon_prot_cis.pdbx_PDB_ins_code
_struct_mon_prot_cis.auth_comp_id
_struct_mon_prot_cis.auth_seq_id
_struct_mon_prot_cis.auth_asym_id
_struct_mon_prot_cis.pdbx_label_comp_id_2
_struct_mon_prot_cis.pdbx_label_seq_id_2
_struct_mon_prot_cis.pdbx_label_asym_id_2
_struct_mon_prot_cis.pdbx_PDB_ins_code_2
_struct_mon_prot_cis.pdbx_auth_comp_id_2
_struct_mon_prot_cis.pdbx_auth_seq_id_2
_struct_mon_prot_cis.pdbx_auth_asym_id_2
_struct_mon_prot_cis.pdbx_PDB_model_num
_struct_mon_prot_cis.pdbx_omega_angle
1 TYR 342 B . ? TYR 342 Z TYR 343 B ? TYR 343 Z 1 -5.85
2 LEU 422 B . ? LEU 422 Z PRO 423 B ? PRO 423 Z 1 -0.51
3 TYR 464 B . ? TYR 464 Z PRO 465 B ? PRO 465 Z 1 0.96
#
loop_
_struct_sheet.id
_struct_sheet.type
_struct_sheet.number_strands
_struct_sheet.details
BDG ? 5 ?
BID ? 5 ?
BIG ? 5 ?
CHF ? 5 ?
BCE ? 3 ?
EF ? 2 ?
GH1 ? 2 ?
GH2 ? 2 ?
GH3 ? 2 ?
#
loop_
_struct_sheet_order.sheet_id
_struct_sheet_order.range_id_1
_struct_sheet_order.range_id_2
_struct_sheet_order.offset
_struct_sheet_order.sense
BDG 1 2 ? anti-parallel
BDG 2 3 ? anti-parallel
BDG 3 4 ? anti-parallel
BDG 4 5 ? anti-parallel
BID 1 2 ? anti-parallel
BID 2 3 ? anti-parallel
BID 3 4 ? anti-parallel
BID 4 5 ? anti-parallel
BIG 1 2 ? anti-parallel
BIG 2 3 ? anti-parallel
BIG 3 4 ? anti-parallel
BIG 4 5 ? anti-parallel
CHF 1 2 ? anti-parallel
CHF 2 3 ? anti-parallel
CHF 3 4 ? anti-parallel
CHF 4 5 ? anti-parallel
BCE 1 2 ? anti-parallel
BCE 2 3 ? anti-parallel
EF 1 2 ? anti-parallel
GH1 1 2 ? anti-parallel
GH2 1 2 ? anti-parallel
GH3 1 2 ? parallel
#
loop_
_struct_sheet_range.sheet_id
_struct_sheet_range.id
_struct_sheet_range.beg_label_comp_id
_struct_sheet_range.beg_label_asym_id
_struct_sheet_range.beg_label_seq_id
_struct_sheet_range.pdbx_beg_PDB_ins_code
_struct_sheet_range.end_label_comp_id
_struct_sheet_range.end_label_asym_id
_struct_sheet_range.end_label_seq_id
_struct_sheet_range.pdbx_end_PDB_ins_code
_struct_sheet_range.beg_auth_comp_id
_struct_sheet_range.beg_auth_asym_id
_struct_sheet_range.beg_auth_seq_id
_struct_sheet_range.end_auth_comp_id
_struct_sheet_range.end_auth_asym_id
_struct_sheet_range.end_auth_seq_id
BDG 1 GLN B 48 ? LEU B 54 ? GLN Z 48 LEU Z 54
BDG 2 GLY B 57 ? MET B 73 ? GLY Z 57 MET Z 73
BDG 3 VAL B 522 ? ARG B 540 ? VAL Z 522 ARG Z 540
BDG 4 THR B 132 ? LEU B 150 ? THR Z 132 LEU Z 150
BDG 5 PHE B 261 ? PHE B 268 ? PHE Z 261 PHE Z 268
BID 1 GLN B 48 ? LEU B 54 ? GLN Z 48 LEU Z 54
BID 2 GLY B 57 ? MET B 73 ? GLY Z 57 MET Z 73
BID 3 VAL B 522 ? ARG B 540 ? VAL Z 522 ARG Z 540
BID 4 THR B 132 ? LEU B 150 ? THR Z 132 LEU Z 150
BID 5 CYS B 273 ? LEU B 275 ? CYS Z 273 LEU Z 275
BIG 1 GLN B 48 ? LEU B 54 ? GLN Z 48 LEU Z 54
BIG 2 GLY B 57 ? MET B 73 ? GLY Z 57 MET Z 73
BIG 3 VAL B 522 ? ARG B 540 ? VAL Z 522 ARG Z 540
BIG 4 THR B 132 ? SER B 154 ? THR Z 132 SER Z 154
BIG 5 VAL B 164 ? ASP B 168 ? VAL Z 164 ASP Z 168
CHF 1 THR B 206 ? TRP B 208 ? THR Z 206 TRP Z 208
CHF 2 TRP B 109 ? VAL B 112 ? TRP Z 109 VAL Z 112
CHF 3 GLN B 497 ? ALA B 503 ? GLN Z 497 ALA Z 503
CHF 4 SER B 172 ? ASP B 178 ? SER Z 172 ASP Z 178
CHF 5 PRO B 251 ? LEU B 255 ? PRO Z 251 LEU Z 255
BCE 1 ARG B 80 ? VAL B 84 ? ARG Z 80 VAL Z 84
BCE 2 HIS B 102 ? THR B 107 ? HIS Z 102 THR Z 107
BCE 3 TRP B 208 ? PHE B 212 ? TRP Z 208 PHE Z 212
EF 1 ASP B 215 ? ILE B 219 ? ASP Z 215 ILE Z 219
EF 2 THR B 230 ? HIS B 234 ? THR Z 230 HIS Z 234
GH1 1 GLY B 351 ? THR B 355 ? GLY Z 351 THR Z 355
GH1 2 TYR B 343 ? SER B 348 ? TYR Z 343 SER Z 348
GH2 1 GLU B 396 ? TYR B 400 ? GLU Z 396 TYR Z 400
GH2 2 PRO B 376 ? PHE B 380 ? PRO Z 376 PHE Z 380
GH3 1 ILE B 469 ? ASP B 471 ? ILE Z 469 ASP Z 471
GH3 2 PHE B 488 ? CYS B 490 ? PHE Z 488 CYS Z 490
#
loop_
_pdbx_struct_sheet_hbond.sheet_id
_pdbx_struct_sheet_hbond.range_id_1
_pdbx_struct_sheet_hbond.range_id_2
_pdbx_struct_sheet_hbond.range_1_label_atom_id
_pdbx_struct_sheet_hbond.range_1_label_comp_id
_pdbx_struct_sheet_hbond.range_1_label_asym_id
_pdbx_struct_sheet_hbond.range_1_label_seq_id
_pdbx_struct_sheet_hbond.range_1_PDB_ins_code
_pdbx_struct_sheet_hbond.range_1_auth_atom_id
_pdbx_struct_sheet_hbond.range_1_auth_comp_id
_pdbx_struct_sheet_hbond.range_1_auth_asym_id
_pdbx_struct_sheet_hbond.range_1_auth_seq_id
_pdbx_struct_sheet_hbond.range_2_label_atom_id
_pdbx_struct_sheet_hbond.range_2_label_comp_id
_pdbx_struct_sheet_hbond.range_2_label_asym_id
_pdbx_struct_sheet_hbond.range_2_label_seq_id
_pdbx_struct_sheet_hbond.range_2_PDB_ins_code
_pdbx_struct_sheet_hbond.range_2_auth_atom_id
_pdbx_struct_sheet_hbond.range_2_auth_comp_id
_pdbx_struct_sheet_hbond.range_2_auth_asym_id
_pdbx_struct_sheet_hbond.range_2_auth_seq_id
BDG 1 2 O LYS B 52 ? O LYS Z 52 N GLU B 60 ? N GLU Z 60
BDG 2 3 O LEU B 71 ? O LEU Z 71 N SER B 525 ? N SER Z 525
BDG 3 4 N LYS B 530 ? N LYS Z 530 O GLU B 144 ? O GLU Z 144
BDG 4 5 O ILE B 145 ? O ILE Z 145 N PHE B 261 ? N PHE Z 261
BID 1 2 O LYS B 52 ? O LYS Z 52 N GLU B 60 ? N GLU Z 60
BID 2 3 O LEU B 71 ? O LEU Z 71 N SER B 525 ? N SER Z 525
BID 3 4 N LYS B 530 ? N LYS Z 530 O GLU B 144 ? O GLU Z 144
BID 4 5 O LEU B 136 ? O LEU Z 136 N CYS B 273 ? N CYS Z 273
BIG 1 2 O LYS B 52 ? O LYS Z 52 N GLU B 60 ? N GLU Z 60
BIG 2 3 O LEU B 71 ? O LEU Z 71 N SER B 525 ? N SER Z 525
BIG 3 4 N LYS B 530 ? N LYS Z 530 O GLU B 144 ? O GLU Z 144
BIG 4 5 O SER B 154 ? O SER Z 154 N VAL B 164 ? N VAL Z 164
CHF 1 2 O THR B 206 ? O THR Z 206 N LEU B 111 ? N LEU Z 111
CHF 2 3 O VAL B 112 ? O VAL Z 112 N LEU B 498 ? N LEU Z 498
CHF 3 4 O LYS B 501 ? O LYS Z 501 N MET B 174 ? N MET Z 174
CHF 4 5 O VAL B 175 ? O VAL Z 175 N HIS B 253 ? N HIS Z 253
BCE 1 2 O VAL B 82 ? O VAL Z 82 N GLN B 104 ? N GLN Z 104
BCE 2 3 O ILE B 105 ? O ILE Z 105 N TYR B 210 ? N TYR Z 210
EF 1 2 O ASP B 215 ? O ASP Z 215 N HIS B 234 ? N HIS Z 234
GH1 1 2 O GLY B 351 ? O GLY Z 351 N SER B 348 ? N SER Z 348
GH2 1 2 O GLU B 396 ? O GLU Z 396 N PHE B 380 ? N PHE Z 380
GH3 1 2 O ASP B 471 ? O ASP Z 471 N CYS B 490 ? N CYS Z 490
#
loop_
_struct_site.id
_struct_site.pdbx_evidence_code
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
_struct_site.pdbx_auth_ins_code
_struct_site.pdbx_num_residues
_struct_site.details
AC1 Software N MG 12 ? 5 'BINDING SITE FOR RESIDUE MG N 12'
AC2 Software N MG 13 ? 2 'BINDING SITE FOR RESIDUE MG N 13'
AC3 Software Z MG 585 ? 2 'BINDING SITE FOR RESIDUE MG Z 585'
AC4 Software Z MG 586 ? 2 'BINDING SITE FOR RESIDUE MG Z 586'
#
loop_
_struct_site_gen.id
_struct_site_gen.site_id
_struct_site_gen.pdbx_num_res
_struct_site_gen.label_comp_id
_struct_site_gen.label_asym_id
_struct_site_gen.label_seq_id
_struct_site_gen.pdbx_auth_ins_code
_struct_site_gen.auth_comp_id
_struct_site_gen.auth_asym_id
_struct_site_gen.auth_seq_id
_struct_site_gen.label_atom_id
_struct_site_gen.label_alt_id
_struct_site_gen.symmetry
_struct_site_gen.details
1 AC1 5 DC A 4 ? DC N 4 . ? 1_555 ?
2 AC1 5 DT A 6 ? DT N 6 . ? 1_555 ?
3 AC1 5 DC A 7 ? DC N 7 . ? 1_555 ?
4 AC1 5 DT A 9 ? DT N 9 . ? 1_555 ?
5 AC1 5 ASN B 180 ? ASN Z 180 . ? 1_555 ?
6 AC2 2 DA A 3 ? DA N 3 . ? 1_555 ?
7 AC2 2 DT A 9 ? DT N 9 . ? 1_555 ?
8 AC3 2 ASP B 237 ? ASP Z 237 . ? 1_555 ?
9 AC3 2 ASP B 240 ? ASP Z 240 . ? 1_555 ?
10 AC4 2 ASP B 237 ? ASP Z 237 . ? 1_555 ?
11 AC4 2 ASP B 239 ? ASP Z 239 . ? 1_555 ?
#
_pdbx_entry_details.entry_id 4DPV
_pdbx_entry_details.compound_details
;VP3 IS A PROTEOLYTIC CLEAVAGE PRODUCT, MISSING THE 15 - 20
N-TERMINAL RESIDUES OF VP2. UP TO 20 PERCENT OF THE 60
COPIES OF VP2 IN EACH CAPSID ARE REPLACED BY VP1, THE
PRODUCT OF ALTERATE TRANSCRIPTIONAL SPLICING, CONTAINING AN
ADDITIONAL 153 N-TERMINAL AMINO ACIDS. NO EVIDENCE IS SEEN
FOR THIS EXTENSION IN THE SIXTY-FOLD AVERAGED ELECTRON
DENSITY MAP.
;
_pdbx_entry_details.source_details ?
_pdbx_entry_details.nonpolymer_details ?
_pdbx_entry_details.sequence_details ?
_pdbx_entry_details.has_ligand_of_interest ?
_pdbx_entry_details.has_protein_modification Y
#
loop_
_pdbx_validate_rmsd_bond.id
_pdbx_validate_rmsd_bond.PDB_model_num
_pdbx_validate_rmsd_bond.auth_atom_id_1
_pdbx_validate_rmsd_bond.auth_asym_id_1
_pdbx_validate_rmsd_bond.auth_comp_id_1
_pdbx_validate_rmsd_bond.auth_seq_id_1
_pdbx_validate_rmsd_bond.PDB_ins_code_1
_pdbx_validate_rmsd_bond.label_alt_id_1
_pdbx_validate_rmsd_bond.auth_atom_id_2
_pdbx_validate_rmsd_bond.auth_asym_id_2
_pdbx_validate_rmsd_bond.auth_comp_id_2
_pdbx_validate_rmsd_bond.auth_seq_id_2
_pdbx_validate_rmsd_bond.PDB_ins_code_2
_pdbx_validate_rmsd_bond.label_alt_id_2
_pdbx_validate_rmsd_bond.bond_value
_pdbx_validate_rmsd_bond.bond_target_value
_pdbx_validate_rmsd_bond.bond_deviation
_pdbx_validate_rmsd_bond.bond_standard_deviation
_pdbx_validate_rmsd_bond.linker_flag
1 1 P N DA 1 ? ? "O5'" N DA 1 ? ? 1.660 1.593 0.067 0.010 N
2 1 "C1'" N DT 9 ? ? N1 N DT 9 ? ? 1.572 1.488 0.084 0.013 N
3 1 "O3'" N DG 10 ? ? "C3'" N DG 10 ? ? 1.518 1.435 0.083 0.013 N
4 1 P N DC 11 ? ? "O5'" N DC 11 ? ? 1.662 1.593 0.069 0.010 N
5 1 "C1'" N DC 11 ? ? N1 N DC 11 ? ? 1.602 1.488 0.114 0.013 N
6 1 CD Z GLU 50 ? ? OE2 Z GLU 50 ? ? 1.327 1.252 0.075 0.011 N
7 1 CD Z GLU 55 ? ? OE1 Z GLU 55 ? ? 1.339 1.252 0.087 0.011 N
8 1 CD Z GLU 60 ? ? OE2 Z GLU 60 ? ? 1.324 1.252 0.072 0.011 N
9 1 CD Z GLU 75 ? ? OE2 Z GLU 75 ? ? 1.376 1.252 0.124 0.011 N
10 1 CD Z GLU 77 ? ? OE2 Z GLU 77 ? ? 1.328 1.252 0.076 0.011 N
11 1 CD Z GLU 135 ? ? OE2 Z GLU 135 ? ? 1.318 1.252 0.066 0.011 N
12 1 CD Z GLU 142 ? ? OE1 Z GLU 142 ? ? 1.333 1.252 0.081 0.011 N
13 1 CD Z GLU 144 ? ? OE2 Z GLU 144 ? ? 1.338 1.252 0.086 0.011 N
14 1 CD Z GLU 155 ? ? OE2 Z GLU 155 ? ? 1.330 1.252 0.078 0.011 N
15 1 CD Z GLU 193 ? ? OE2 Z GLU 193 ? ? 1.326 1.252 0.074 0.011 N
16 1 CD Z GLU 260 ? ? OE2 Z GLU 260 ? ? 1.329 1.252 0.077 0.011 N
17 1 CD Z GLU 368 ? ? OE2 Z GLU 368 ? ? 1.327 1.252 0.075 0.011 N
18 1 CD Z GLU 393 ? ? OE2 Z GLU 393 ? ? 1.337 1.252 0.085 0.011 N
19 1 CD Z GLU 396 ? ? OE2 Z GLU 396 ? ? 1.321 1.252 0.069 0.011 N
20 1 CD Z GLU 411 ? ? OE2 Z GLU 411 ? ? 1.324 1.252 0.072 0.011 N
21 1 CD Z GLU 509 ? ? OE2 Z GLU 509 ? ? 1.348 1.252 0.096 0.011 N
#
loop_
_pdbx_validate_rmsd_angle.id
_pdbx_validate_rmsd_angle.PDB_model_num
_pdbx_validate_rmsd_angle.auth_atom_id_1
_pdbx_validate_rmsd_angle.auth_asym_id_1
_pdbx_validate_rmsd_angle.auth_comp_id_1
_pdbx_validate_rmsd_angle.auth_seq_id_1
_pdbx_validate_rmsd_angle.PDB_ins_code_1
_pdbx_validate_rmsd_angle.label_alt_id_1
_pdbx_validate_rmsd_angle.auth_atom_id_2
_pdbx_validate_rmsd_angle.auth_asym_id_2
_pdbx_validate_rmsd_angle.auth_comp_id_2
_pdbx_validate_rmsd_angle.auth_seq_id_2
_pdbx_validate_rmsd_angle.PDB_ins_code_2
_pdbx_validate_rmsd_angle.label_alt_id_2
_pdbx_validate_rmsd_angle.auth_atom_id_3
_pdbx_validate_rmsd_angle.auth_asym_id_3
_pdbx_validate_rmsd_angle.auth_comp_id_3
_pdbx_validate_rmsd_angle.auth_seq_id_3
_pdbx_validate_rmsd_angle.PDB_ins_code_3
_pdbx_validate_rmsd_angle.label_alt_id_3
_pdbx_validate_rmsd_angle.angle_value
_pdbx_validate_rmsd_angle.angle_target_value
_pdbx_validate_rmsd_angle.angle_deviation
_pdbx_validate_rmsd_angle.angle_standard_deviation
_pdbx_validate_rmsd_angle.linker_flag
1 1 "C3'" N DA 1 ? ? "O3'" N DA 1 ? ? P N DT 2 ? ? 128.09 119.70 8.39 1.20 Y
2 1 P N DA 3 ? ? "O5'" N DA 3 ? ? "C5'" N DA 3 ? ? 107.37 120.90 -13.53 1.60 N
3 1 N9 N DA 3 ? ? "C1'" N DA 3 ? ? "C2'" N DA 3 ? ? 122.73 114.30 8.43 1.40 N
4 1 "O4'" N DA 3 ? ? "C1'" N DA 3 ? ? N9 N DA 3 ? ? 113.58 108.30 5.28 0.30 N
5 1 C2 N DA 3 ? ? N3 N DA 3 ? ? C4 N DA 3 ? ? 107.35 110.60 -3.25 0.50 N
6 1 C5 N DA 3 ? ? C6 N DA 3 ? ? N1 N DA 3 ? ? 114.65 117.70 -3.05 0.50 N
7 1 "O4'" N DC 7 ? ? "C1'" N DC 7 ? ? N1 N DC 7 ? ? 112.82 108.30 4.52 0.30 N
8 1 "C3'" N DT 8 ? ? "O3'" N DT 8 ? ? P N DT 9 ? ? 128.29 119.70 8.59 1.20 Y
9 1 "O4'" N DT 9 ? ? "C1'" N DT 9 ? ? N1 N DT 9 ? ? 113.83 108.30 5.53 0.30 N
10 1 "O4'" N DG 10 ? ? "C1'" N DG 10 ? ? N9 N DG 10 ? ? 112.86 108.30 4.56 0.30 N
11 1 "C3'" N DG 10 ? ? "O3'" N DG 10 ? ? P N DC 11 ? ? 127.97 119.70 8.27 1.20 Y
12 1 "O4'" N DC 11 ? ? "C1'" N DC 11 ? ? N1 N DC 11 ? ? 111.15 108.30 2.85 0.30 N
13 1 C Z GLY 24 ? ? N Z ASN 25 ? ? CA Z ASN 25 ? ? 137.92 121.70 16.22 2.50 Y
14 1 CA Z ASN 25 ? ? CB Z ASN 25 ? ? CG Z ASN 25 ? ? 129.25 113.40 15.85 2.20 N
15 1 CA Z THR 44 ? ? CB Z THR 44 ? ? CG2 Z THR 44 ? ? 103.79 112.40 -8.61 1.40 N
16 1 CB Z ASP 99 ? ? CG Z ASP 99 ? ? OD2 Z ASP 99 ? ? 112.25 118.30 -6.05 0.90 N
17 1 CB Z ASP 113 ? ? CG Z ASP 113 ? ? OD2 Z ASP 113 ? ? 112.21 118.30 -6.09 0.90 N
18 1 CA Z MET 133 ? ? CB Z MET 133 ? ? CG Z MET 133 ? ? 97.82 113.30 -15.48 1.70 N
19 1 CB Z ASP 168 ? ? CG Z ASP 168 ? ? OD1 Z ASP 168 ? ? 125.43 118.30 7.13 0.90 N
20 1 C Z LYS 201 ? ? N Z PRO 202 ? ? CD Z PRO 202 ? ? 115.55 128.40 -12.85 2.10 Y
21 1 CA Z THR 203 ? ? CB Z THR 203 ? ? CG2 Z THR 203 ? ? 100.65 112.40 -11.75 1.40 N
22 1 C Z ILE 204 ? ? N Z PRO 205 ? ? CA Z PRO 205 ? ? 128.49 119.30 9.19 1.50 Y
23 1 C Z ILE 204 ? ? N Z PRO 205 ? ? CD Z PRO 205 ? ? 115.66 128.40 -12.74 2.10 Y
24 1 C Z ASP 237 ? ? N Z PRO 238 ? ? CD Z PRO 238 ? ? 114.95 128.40 -13.45 2.10 Y
25 1 CB Z ASP 240 ? ? CG Z ASP 240 ? ? OD1 Z ASP 240 ? ? 109.16 118.30 -9.14 0.90 N
26 1 CB Z ASP 240 ? ? CG Z ASP 240 ? ? OD2 Z ASP 240 ? ? 128.98 118.30 10.68 0.90 N
27 1 C Z VAL 250 ? ? N Z PRO 251 ? ? CD Z PRO 251 ? ? 102.05 128.40 -26.35 2.10 Y
28 1 CB Z ASP 259 ? ? CG Z ASP 259 ? ? OD2 Z ASP 259 ? ? 111.82 118.30 -6.48 0.90 N
29 1 CB Z ASP 269 ? ? CG Z ASP 269 ? ? OD1 Z ASP 269 ? ? 123.88 118.30 5.58 0.90 N
30 1 CB Z ASP 269 ? ? CG Z ASP 269 ? ? OD2 Z ASP 269 ? ? 112.04 118.30 -6.26 0.90 N
31 1 CB Z ASP 305 ? ? CG Z ASP 305 ? ? OD1 Z ASP 305 ? ? 112.85 118.30 -5.45 0.90 N
32 1 CB Z ASP 311 ? ? CG Z ASP 311 ? ? OD1 Z ASP 311 ? ? 112.35 118.30 -5.95 0.90 N
33 1 CB Z ASN 321 ? ? CA Z ASN 321 ? ? C Z ASN 321 ? ? 97.44 110.40 -12.96 2.00 N
34 1 NE Z ARG 332 ? ? CZ Z ARG 332 ? ? NH1 Z ARG 332 ? ? 123.66 120.30 3.36 0.50 N
35 1 CB Z ASP 367 ? ? CG Z ASP 367 ? ? OD1 Z ASP 367 ? ? 123.75 118.30 5.45 0.90 N
36 1 CB Z ASP 367 ? ? CG Z ASP 367 ? ? OD2 Z ASP 367 ? ? 112.68 118.30 -5.62 0.90 N
37 1 CB Z ASP 373 ? ? CG Z ASP 373 ? ? OD2 Z ASP 373 ? ? 112.49 118.30 -5.81 0.90 N
38 1 CB Z ASP 405 ? ? CG Z ASP 405 ? ? OD1 Z ASP 405 ? ? 125.76 118.30 7.46 0.90 N
39 1 C Z TYR 409 ? ? N Z PRO 410 ? ? CD Z PRO 410 ? ? 114.38 128.40 -14.02 2.10 Y
40 1 CB Z ASP 427 ? ? CG Z ASP 427 ? ? OD2 Z ASP 427 ? ? 112.26 118.30 -6.04 0.90 N
41 1 CB Z ASP 434 ? ? CG Z ASP 434 ? ? OD2 Z ASP 434 ? ? 110.47 118.30 -7.83 0.90 N
42 1 CB Z ASP 471 ? ? CG Z ASP 471 ? ? OD1 Z ASP 471 ? ? 125.11 118.30 6.81 0.90 N
43 1 CB Z ASP 471 ? ? CG Z ASP 471 ? ? OD2 Z ASP 471 ? ? 112.05 118.30 -6.25 0.90 N
44 1 CB Z ASP 477 ? ? CG Z ASP 477 ? ? OD2 Z ASP 477 ? ? 112.82 118.30 -5.48 0.90 N
45 1 NE Z ARG 481 ? ? CZ Z ARG 481 ? ? NH1 Z ARG 481 ? ? 123.65 120.30 3.35 0.50 N
46 1 CB Z ASP 513 ? ? CG Z ASP 513 ? ? OD2 Z ASP 513 ? ? 111.84 118.30 -6.46 0.90 N
47 1 NE Z ARG 520 ? ? CZ Z ARG 520 ? ? NH1 Z ARG 520 ? ? 123.41 120.30 3.11 0.50 N
#
loop_
_pdbx_validate_torsion.id
_pdbx_validate_torsion.PDB_model_num
_pdbx_validate_torsion.auth_comp_id
_pdbx_validate_torsion.auth_asym_id
_pdbx_validate_torsion.auth_seq_id
_pdbx_validate_torsion.PDB_ins_code
_pdbx_validate_torsion.label_alt_id
_pdbx_validate_torsion.phi
_pdbx_validate_torsion.psi
1 1 ASN Z 25 ? ? 112.58 -23.12
2 1 GLU Z 77 ? ? -82.75 43.06
3 1 ASN Z 86 ? ? -96.49 33.65
4 1 ASN Z 93 ? ? 91.83 98.58
5 1 ASN Z 95 ? ? -106.64 42.09
6 1 HIS Z 102 ? ? 177.22 165.48
7 1 ALA Z 116 ? ? -173.62 131.43
8 1 PRO Z 161 ? ? -65.13 74.14
9 1 LEU Z 218 ? ? -166.75 109.86
10 1 TRP Z 279 ? ? -141.02 -19.51
11 1 GLU Z 298 ? ? -66.72 -177.62
12 1 ALA Z 300 ? ? -81.70 35.15
13 1 ILE Z 330 ? ? -37.75 145.34
14 1 ALA Z 334 ? ? -166.00 -148.38
15 1 TYR Z 342 ? ? -173.40 148.04
16 1 THR Z 349 ? ? -39.13 -31.00
17 1 PHE Z 353 ? ? -170.28 144.99
18 1 ARG Z 361 ? ? -146.85 -88.50
19 1 THR Z 366 ? ? -124.21 -89.40
20 1 ASP Z 367 ? ? 72.24 43.98
21 1 GLU Z 368 ? ? 66.85 -14.02
22 1 ALA Z 371 ? ? -26.23 117.40
23 1 ALA Z 372 ? ? -128.69 -147.18
24 1 GLU Z 393 ? ? -81.16 43.05
25 1 LEU Z 457 ? ? -171.67 -176.54
26 1 ASP Z 475 ? ? -93.22 53.92
27 1 ASN Z 492 ? ? -89.37 -135.00
28 1 LYS Z 501 ? ? 178.93 147.11
29 1 GLN Z 558 ? ? -31.01 -32.30
30 1 ASN Z 565 ? ? -61.69 2.88
31 1 SER Z 576 ? ? -128.18 -50.66
#
_pdbx_validate_peptide_omega.id 1
_pdbx_validate_peptide_omega.PDB_model_num 1
_pdbx_validate_peptide_omega.auth_comp_id_1 ASN
_pdbx_validate_peptide_omega.auth_asym_id_1 Z
_pdbx_validate_peptide_omega.auth_seq_id_1 25
_pdbx_validate_peptide_omega.PDB_ins_code_1 ?
_pdbx_validate_peptide_omega.label_alt_id_1 ?
_pdbx_validate_peptide_omega.auth_comp_id_2 GLY
_pdbx_validate_peptide_omega.auth_asym_id_2 Z
_pdbx_validate_peptide_omega.auth_seq_id_2 26
_pdbx_validate_peptide_omega.PDB_ins_code_2 ?
_pdbx_validate_peptide_omega.label_alt_id_2 ?
_pdbx_validate_peptide_omega.omega -141.36
#
_pdbx_validate_main_chain_plane.id 1
_pdbx_validate_main_chain_plane.PDB_model_num 1
_pdbx_validate_main_chain_plane.auth_comp_id VAL
_pdbx_validate_main_chain_plane.auth_asym_id Z
_pdbx_validate_main_chain_plane.auth_seq_id 241
_pdbx_validate_main_chain_plane.PDB_ins_code ?
_pdbx_validate_main_chain_plane.label_alt_id ?
_pdbx_validate_main_chain_plane.improper_torsion_angle -10.35
#
_pdbx_point_symmetry.entry_id 4DPV
_pdbx_point_symmetry.Schoenflies_symbol I
_pdbx_point_symmetry.H-M_notation 532
#
_pdbx_database_remark.id 700
_pdbx_database_remark.text
;SHEET
THE STRUCTURE OF CANINE PARVOVIRUS FOLLOWS THE CANONICAL
PICORNA-VIRUS LIKE "JELLY ROLL" BARREL. THE SHEET
IDENTIFIED AS "BDG" IS THAT REFERRED TO AS "BIDG" IN THE
LITERATURE WITH STRANDS 1 TO 5 CORRESPONDING TO STRANDS A,
B, I, D, AND G. THE SHEET IDENTIFIED AS "CHF" IS THE
SO-CALLED CHEF SHEET WITH STRANDS 1 TO 4 CORRESPONDING TO
STRANDS C, H, E, AND F. THESE TWO SHEETS ARE LOOSELY
CONNECTED TOGETHER BY HYDROGEN BONDS BETWEEN STRAND 4 OF
"CHF" AND RESIDUE 45 IMMEDIATELY PRECEDING STRAND 1 OF
"BDG" OF A FIVE-FOLD RELATED PROTOMER THAT IS
GENERATED USING THE SYMMETRY OPERATORS LISTED BELOW. CPV
CONTAINS SEVERAL LONG LOOPS BETWEEN STRANDS OF "BDG" AND
"CHF" WITH LITTLE ORGANIZED SECONDARY STRUCTURE. THERE ARE
STRANDS WITHIN THE LOOPS THAT ARE LOOSELY HYDROGEN-BONDED
TOGETHER. WITH FEWER HYDROGEN BONDS AND LESS REGULAR
SECONDARY STRUCTURE THEY MUST BE REGARDED MORE TENTATIVELY.
THIS IS WHY THE SHEET "LP2" HAS BEEN IDENTIFIED SEPARATELY,
ALTHOUGH IT COULD BE CONSIDERED TO BE AN EXTENSION OF SHEET
"CHF", EXTENDING FROM STRAND 1. STRAND 1 OF "LP2" HAS A
BULGE AND A CHANGE OF DIRECTION AT RESIDUE 107, AFTER WHICH
IT BECOMES STRAND 1 OF "CHF". THE MIDDLE STRAND OF "LP2"
CONTAINS TWO SEGMENTS THAT RUN IN THE SAME GENERAL
DIRECTION, BUT ARE SEPARATED BY NON-BETA STRUCTURE. THE
FIRST SEGMENT (206 - 211) HYDROGEN BONDS ON ONE SIDE ONLY,
TO RESIDUES 103 - 111, AND THE SECOND SEGMENT (215 - 218)
HYDROGEN BONDS ON THE OPPOSITE SIDE TO RESIDUES 230 - 235.
IN ORDER TO REPRESENT THE BIFURCATED SHEET STRUCTURE IN THE
*SHEET* RECORDS BELOW, TWO SHEETS, *BDG* AND *CDG* ARE
DEFINED. STRANDS 1 - 4 OF THESE SHEETS ARE IDENTICAL.
THE CHAIN DESIGNATORS IN THE SECONDARY STRUCTURE LIST REFER
TO THE NON-CRYSTALLOGRAPHIC ICOSAHEDRAL SYMMETRY OPERATORS
LABELED "A" TO "H" IN *REMARK 8*, AND ARE USED WHEN A SHEET
SPANS TWO SUBUNITS.
PDB FORMAT DOES NOT ALLOW STRANDS FROM ANOTHER ASYMMETRIC
UNIT TO BE PRESENTED ON SHEET RECORDS. THE FOLLOWING
STRANDS COME FROM OTHER ASYMMETRIC UNITS:
CHF 6 GLY A 43 PHE A 45 -1 O GLY A 43 N LEU Z 254
GH1 4 TRP F 414 ASN F 417 -1 N TRP F 414 O PHE Z 345
GH1 4 ASN F 428 LEU F 430 -1 N LEU F 430 O ILE F 415
GH2 3 GLY F 315 THR F 317 -1 N THR F 317 O ARG Z 377
;
#
loop_
_pdbx_unobs_or_zero_occ_residues.id
_pdbx_unobs_or_zero_occ_residues.PDB_model_num
_pdbx_unobs_or_zero_occ_residues.polymer_flag
_pdbx_unobs_or_zero_occ_residues.occupancy_flag
_pdbx_unobs_or_zero_occ_residues.auth_asym_id
_pdbx_unobs_or_zero_occ_residues.auth_comp_id
_pdbx_unobs_or_zero_occ_residues.auth_seq_id
_pdbx_unobs_or_zero_occ_residues.PDB_ins_code
_pdbx_unobs_or_zero_occ_residues.label_asym_id
_pdbx_unobs_or_zero_occ_residues.label_comp_id
_pdbx_unobs_or_zero_occ_residues.label_seq_id
1 1 Y 1 Z MET 1 ? B MET 1
2 1 Y 1 Z SER 2 ? B SER 2
3 1 Y 1 Z ASP 3 ? B ASP 3
4 1 Y 1 Z GLY 4 ? B GLY 4
5 1 Y 1 Z ALA 5 ? B ALA 5
6 1 Y 1 Z VAL 6 ? B VAL 6
7 1 Y 1 Z GLN 7 ? B GLN 7
8 1 Y 1 Z PRO 8 ? B PRO 8
9 1 Y 1 Z ASP 9 ? B ASP 9
10 1 Y 1 Z GLY 10 ? B GLY 10
11 1 Y 1 Z GLY 11 ? B GLY 11
12 1 Y 1 Z GLN 12 ? B GLN 12
13 1 Y 1 Z PRO 13 ? B PRO 13
14 1 Y 1 Z ALA 14 ? B ALA 14
15 1 Y 1 Z VAL 15 ? B VAL 15
16 1 Y 1 Z ARG 16 ? B ARG 16
17 1 Y 1 Z ASN 17 ? B ASN 17
18 1 Y 1 Z GLU 18 ? B GLU 18
19 1 Y 1 Z ARG 19 ? B ARG 19
20 1 Y 1 Z ALA 20 ? B ALA 20
21 1 Y 1 Z THR 21 ? B THR 21
22 1 Y 1 Z SER 156 ? B SER 156
23 1 Y 1 Z ALA 157 ? B ALA 157
24 1 Y 1 Z THR 158 ? B THR 158
25 1 Y 1 Z GLN 159 ? B GLN 159
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_ordinal
ALA N N N N 1
ALA CA C N S 2
ALA C C N N 3
ALA O O N N 4
ALA CB C N N 5
ALA OXT O N N 6
ALA H H N N 7
ALA H2 H N N 8
ALA HA H N N 9
ALA HB1 H N N 10
ALA HB2 H N N 11
ALA HB3 H N N 12
ALA HXT H N N 13
ARG N N N N 14
ARG CA C N S 15
ARG C C N N 16
ARG O O N N 17
ARG CB C N N 18
ARG CG C N N 19
ARG CD C N N 20
ARG NE N N N 21
ARG CZ C N N 22
ARG NH1 N N N 23
ARG NH2 N N N 24
ARG OXT O N N 25
ARG H H N N 26
ARG H2 H N N 27
ARG HA H N N 28
ARG HB2 H N N 29
ARG HB3 H N N 30
ARG HG2 H N N 31
ARG HG3 H N N 32
ARG HD2 H N N 33
ARG HD3 H N N 34
ARG HE H N N 35
ARG HH11 H N N 36
ARG HH12 H N N 37
ARG HH21 H N N 38
ARG HH22 H N N 39
ARG HXT H N N 40
ASN N N N N 41
ASN CA C N S 42
ASN C C N N 43
ASN O O N N 44
ASN CB C N N 45
ASN CG C N N 46
ASN OD1 O N N 47
ASN ND2 N N N 48
ASN OXT O N N 49
ASN H H N N 50
ASN H2 H N N 51
ASN HA H N N 52
ASN HB2 H N N 53
ASN HB3 H N N 54
ASN HD21 H N N 55
ASN HD22 H N N 56
ASN HXT H N N 57
ASP N N N N 58
ASP CA C N S 59
ASP C C N N 60
ASP O O N N 61
ASP CB C N N 62
ASP CG C N N 63
ASP OD1 O N N 64
ASP OD2 O N N 65
ASP OXT O N N 66
ASP H H N N 67
ASP H2 H N N 68
ASP HA H N N 69
ASP HB2 H N N 70
ASP HB3 H N N 71
ASP HD2 H N N 72
ASP HXT H N N 73
CYS N N N N 74
CYS CA C N R 75
CYS C C N N 76
CYS O O N N 77
CYS CB C N N 78
CYS SG S N N 79
CYS OXT O N N 80
CYS H H N N 81
CYS H2 H N N 82
CYS HA H N N 83
CYS HB2 H N N 84
CYS HB3 H N N 85
CYS HG H N N 86
CYS HXT H N N 87
DA OP3 O N N 88
DA P P N N 89
DA OP1 O N N 90
DA OP2 O N N 91
DA "O5'" O N N 92
DA "C5'" C N N 93
DA "C4'" C N R 94
DA "O4'" O N N 95
DA "C3'" C N S 96
DA "O3'" O N N 97
DA "C2'" C N N 98
DA "C1'" C N R 99
DA N9 N Y N 100
DA C8 C Y N 101
DA N7 N Y N 102
DA C5 C Y N 103
DA C6 C Y N 104
DA N6 N N N 105
DA N1 N Y N 106
DA C2 C Y N 107
DA N3 N Y N 108
DA C4 C Y N 109
DA HOP3 H N N 110
DA HOP2 H N N 111
DA "H5'" H N N 112
DA "H5''" H N N 113
DA "H4'" H N N 114
DA "H3'" H N N 115
DA "HO3'" H N N 116
DA "H2'" H N N 117
DA "H2''" H N N 118
DA "H1'" H N N 119
DA H8 H N N 120
DA H61 H N N 121
DA H62 H N N 122
DA H2 H N N 123
DC OP3 O N N 124
DC P P N N 125
DC OP1 O N N 126
DC OP2 O N N 127
DC "O5'" O N N 128
DC "C5'" C N N 129
DC "C4'" C N R 130
DC "O4'" O N N 131
DC "C3'" C N S 132
DC "O3'" O N N 133
DC "C2'" C N N 134
DC "C1'" C N R 135
DC N1 N N N 136
DC C2 C N N 137
DC O2 O N N 138
DC N3 N N N 139
DC C4 C N N 140
DC N4 N N N 141
DC C5 C N N 142
DC C6 C N N 143
DC HOP3 H N N 144
DC HOP2 H N N 145
DC "H5'" H N N 146
DC "H5''" H N N 147
DC "H4'" H N N 148
DC "H3'" H N N 149
DC "HO3'" H N N 150
DC "H2'" H N N 151
DC "H2''" H N N 152
DC "H1'" H N N 153
DC H41 H N N 154
DC H42 H N N 155
DC H5 H N N 156
DC H6 H N N 157
DG OP3 O N N 158
DG P P N N 159
DG OP1 O N N 160
DG OP2 O N N 161
DG "O5'" O N N 162
DG "C5'" C N N 163
DG "C4'" C N R 164
DG "O4'" O N N 165
DG "C3'" C N S 166
DG "O3'" O N N 167
DG "C2'" C N N 168
DG "C1'" C N R 169
DG N9 N Y N 170
DG C8 C Y N 171
DG N7 N Y N 172
DG C5 C Y N 173
DG C6 C N N 174
DG O6 O N N 175
DG N1 N N N 176
DG C2 C N N 177
DG N2 N N N 178
DG N3 N N N 179
DG C4 C Y N 180
DG HOP3 H N N 181
DG HOP2 H N N 182
DG "H5'" H N N 183
DG "H5''" H N N 184
DG "H4'" H N N 185
DG "H3'" H N N 186
DG "HO3'" H N N 187
DG "H2'" H N N 188
DG "H2''" H N N 189
DG "H1'" H N N 190
DG H8 H N N 191
DG H1 H N N 192
DG H21 H N N 193
DG H22 H N N 194
DT OP3 O N N 195
DT P P N N 196
DT OP1 O N N 197
DT OP2 O N N 198
DT "O5'" O N N 199
DT "C5'" C N N 200
DT "C4'" C N R 201
DT "O4'" O N N 202
DT "C3'" C N S 203
DT "O3'" O N N 204
DT "C2'" C N N 205
DT "C1'" C N R 206
DT N1 N N N 207
DT C2 C N N 208
DT O2 O N N 209
DT N3 N N N 210
DT C4 C N N 211
DT O4 O N N 212
DT C5 C N N 213
DT C7 C N N 214
DT C6 C N N 215
DT HOP3 H N N 216
DT HOP2 H N N 217
DT "H5'" H N N 218
DT "H5''" H N N 219
DT "H4'" H N N 220
DT "H3'" H N N 221
DT "HO3'" H N N 222
DT "H2'" H N N 223
DT "H2''" H N N 224
DT "H1'" H N N 225
DT H3 H N N 226
DT H71 H N N 227
DT H72 H N N 228
DT H73 H N N 229
DT H6 H N N 230
GLN N N N N 231
GLN CA C N S 232
GLN C C N N 233
GLN O O N N 234
GLN CB C N N 235
GLN CG C N N 236
GLN CD C N N 237
GLN OE1 O N N 238
GLN NE2 N N N 239
GLN OXT O N N 240
GLN H H N N 241
GLN H2 H N N 242
GLN HA H N N 243
GLN HB2 H N N 244
GLN HB3 H N N 245
GLN HG2 H N N 246
GLN HG3 H N N 247
GLN HE21 H N N 248
GLN HE22 H N N 249
GLN HXT H N N 250
GLU N N N N 251
GLU CA C N S 252
GLU C C N N 253
GLU O O N N 254
GLU CB C N N 255
GLU CG C N N 256
GLU CD C N N 257
GLU OE1 O N N 258
GLU OE2 O N N 259
GLU OXT O N N 260
GLU H H N N 261
GLU H2 H N N 262
GLU HA H N N 263
GLU HB2 H N N 264
GLU HB3 H N N 265
GLU HG2 H N N 266
GLU HG3 H N N 267
GLU HE2 H N N 268
GLU HXT H N N 269
GLY N N N N 270
GLY CA C N N 271
GLY C C N N 272
GLY O O N N 273
GLY OXT O N N 274
GLY H H N N 275
GLY H2 H N N 276
GLY HA2 H N N 277
GLY HA3 H N N 278
GLY HXT H N N 279
HIS N N N N 280
HIS CA C N S 281
HIS C C N N 282
HIS O O N N 283
HIS CB C N N 284
HIS CG C Y N 285
HIS ND1 N Y N 286
HIS CD2 C Y N 287
HIS CE1 C Y N 288
HIS NE2 N Y N 289
HIS OXT O N N 290
HIS H H N N 291
HIS H2 H N N 292
HIS HA H N N 293
HIS HB2 H N N 294
HIS HB3 H N N 295
HIS HD1 H N N 296
HIS HD2 H N N 297
HIS HE1 H N N 298
HIS HE2 H N N 299
HIS HXT H N N 300
ILE N N N N 301
ILE CA C N S 302
ILE C C N N 303
ILE O O N N 304
ILE CB C N S 305
ILE CG1 C N N 306
ILE CG2 C N N 307
ILE CD1 C N N 308
ILE OXT O N N 309
ILE H H N N 310
ILE H2 H N N 311
ILE HA H N N 312
ILE HB H N N 313
ILE HG12 H N N 314
ILE HG13 H N N 315
ILE HG21 H N N 316
ILE HG22 H N N 317
ILE HG23 H N N 318
ILE HD11 H N N 319
ILE HD12 H N N 320
ILE HD13 H N N 321
ILE HXT H N N 322
LEU N N N N 323
LEU CA C N S 324
LEU C C N N 325
LEU O O N N 326
LEU CB C N N 327
LEU CG C N N 328
LEU CD1 C N N 329
LEU CD2 C N N 330
LEU OXT O N N 331
LEU H H N N 332
LEU H2 H N N 333
LEU HA H N N 334
LEU HB2 H N N 335
LEU HB3 H N N 336
LEU HG H N N 337
LEU HD11 H N N 338
LEU HD12 H N N 339
LEU HD13 H N N 340
LEU HD21 H N N 341
LEU HD22 H N N 342
LEU HD23 H N N 343
LEU HXT H N N 344
LYS N N N N 345
LYS CA C N S 346
LYS C C N N 347
LYS O O N N 348
LYS CB C N N 349
LYS CG C N N 350
LYS CD C N N 351
LYS CE C N N 352
LYS NZ N N N 353
LYS OXT O N N 354
LYS H H N N 355
LYS H2 H N N 356
LYS HA H N N 357
LYS HB2 H N N 358
LYS HB3 H N N 359
LYS HG2 H N N 360
LYS HG3 H N N 361
LYS HD2 H N N 362
LYS HD3 H N N 363
LYS HE2 H N N 364
LYS HE3 H N N 365
LYS HZ1 H N N 366
LYS HZ2 H N N 367
LYS HZ3 H N N 368
LYS HXT H N N 369
MET N N N N 370
MET CA C N S 371
MET C C N N 372
MET O O N N 373
MET CB C N N 374
MET CG C N N 375
MET SD S N N 376
MET CE C N N 377
MET OXT O N N 378
MET H H N N 379
MET H2 H N N 380
MET HA H N N 381
MET HB2 H N N 382
MET HB3 H N N 383
MET HG2 H N N 384
MET HG3 H N N 385
MET HE1 H N N 386
MET HE2 H N N 387
MET HE3 H N N 388
MET HXT H N N 389
MG MG MG N N 390
PHE N N N N 391
PHE CA C N S 392
PHE C C N N 393
PHE O O N N 394
PHE CB C N N 395
PHE CG C Y N 396
PHE CD1 C Y N 397
PHE CD2 C Y N 398
PHE CE1 C Y N 399
PHE CE2 C Y N 400
PHE CZ C Y N 401
PHE OXT O N N 402
PHE H H N N 403
PHE H2 H N N 404
PHE HA H N N 405
PHE HB2 H N N 406
PHE HB3 H N N 407
PHE HD1 H N N 408
PHE HD2 H N N 409
PHE HE1 H N N 410
PHE HE2 H N N 411
PHE HZ H N N 412
PHE HXT H N N 413
PRO N N N N 414
PRO CA C N S 415
PRO C C N N 416
PRO O O N N 417
PRO CB C N N 418
PRO CG C N N 419
PRO CD C N N 420
PRO OXT O N N 421
PRO H H N N 422
PRO HA H N N 423
PRO HB2 H N N 424
PRO HB3 H N N 425
PRO HG2 H N N 426
PRO HG3 H N N 427
PRO HD2 H N N 428
PRO HD3 H N N 429
PRO HXT H N N 430
SER N N N N 431
SER CA C N S 432
SER C C N N 433
SER O O N N 434
SER CB C N N 435
SER OG O N N 436
SER OXT O N N 437
SER H H N N 438
SER H2 H N N 439
SER HA H N N 440
SER HB2 H N N 441
SER HB3 H N N 442
SER HG H N N 443
SER HXT H N N 444
THR N N N N 445
THR CA C N S 446
THR C C N N 447
THR O O N N 448
THR CB C N R 449
THR OG1 O N N 450
THR CG2 C N N 451
THR OXT O N N 452
THR H H N N 453
THR H2 H N N 454
THR HA H N N 455
THR HB H N N 456
THR HG1 H N N 457
THR HG21 H N N 458
THR HG22 H N N 459
THR HG23 H N N 460
THR HXT H N N 461
TRP N N N N 462
TRP CA C N S 463
TRP C C N N 464
TRP O O N N 465
TRP CB C N N 466
TRP CG C Y N 467
TRP CD1 C Y N 468
TRP CD2 C Y N 469
TRP NE1 N Y N 470
TRP CE2 C Y N 471
TRP CE3 C Y N 472
TRP CZ2 C Y N 473
TRP CZ3 C Y N 474
TRP CH2 C Y N 475
TRP OXT O N N 476
TRP H H N N 477
TRP H2 H N N 478
TRP HA H N N 479
TRP HB2 H N N 480
TRP HB3 H N N 481
TRP HD1 H N N 482
TRP HE1 H N N 483
TRP HE3 H N N 484
TRP HZ2 H N N 485
TRP HZ3 H N N 486
TRP HH2 H N N 487
TRP HXT H N N 488
TYR N N N N 489
TYR CA C N S 490
TYR C C N N 491
TYR O O N N 492
TYR CB C N N 493
TYR CG C Y N 494
TYR CD1 C Y N 495
TYR CD2 C Y N 496
TYR CE1 C Y N 497
TYR CE2 C Y N 498
TYR CZ C Y N 499
TYR OH O N N 500
TYR OXT O N N 501
TYR H H N N 502
TYR H2 H N N 503
TYR HA H N N 504
TYR HB2 H N N 505
TYR HB3 H N N 506
TYR HD1 H N N 507
TYR HD2 H N N 508
TYR HE1 H N N 509
TYR HE2 H N N 510
TYR HH H N N 511
TYR HXT H N N 512
VAL N N N N 513
VAL CA C N S 514
VAL C C N N 515
VAL O O N N 516
VAL CB C N N 517
VAL CG1 C N N 518
VAL CG2 C N N 519
VAL OXT O N N 520
VAL H H N N 521
VAL H2 H N N 522
VAL HA H N N 523
VAL HB H N N 524
VAL HG11 H N N 525
VAL HG12 H N N 526
VAL HG13 H N N 527
VAL HG21 H N N 528
VAL HG22 H N N 529
VAL HG23 H N N 530
VAL HXT H N N 531
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
ALA N CA sing N N 1
ALA N H sing N N 2
ALA N H2 sing N N 3
ALA CA C sing N N 4
ALA CA CB sing N N 5
ALA CA HA sing N N 6
ALA C O doub N N 7
ALA C OXT sing N N 8
ALA CB HB1 sing N N 9
ALA CB HB2 sing N N 10
ALA CB HB3 sing N N 11
ALA OXT HXT sing N N 12
ARG N CA sing N N 13
ARG N H sing N N 14
ARG N H2 sing N N 15
ARG CA C sing N N 16
ARG CA CB sing N N 17
ARG CA HA sing N N 18
ARG C O doub N N 19
ARG C OXT sing N N 20
ARG CB CG sing N N 21
ARG CB HB2 sing N N 22
ARG CB HB3 sing N N 23
ARG CG CD sing N N 24
ARG CG HG2 sing N N 25
ARG CG HG3 sing N N 26
ARG CD NE sing N N 27
ARG CD HD2 sing N N 28
ARG CD HD3 sing N N 29
ARG NE CZ sing N N 30
ARG NE HE sing N N 31
ARG CZ NH1 sing N N 32
ARG CZ NH2 doub N N 33
ARG NH1 HH11 sing N N 34
ARG NH1 HH12 sing N N 35
ARG NH2 HH21 sing N N 36
ARG NH2 HH22 sing N N 37
ARG OXT HXT sing N N 38
ASN N CA sing N N 39
ASN N H sing N N 40
ASN N H2 sing N N 41
ASN CA C sing N N 42
ASN CA CB sing N N 43
ASN CA HA sing N N 44
ASN C O doub N N 45
ASN C OXT sing N N 46
ASN CB CG sing N N 47
ASN CB HB2 sing N N 48
ASN CB HB3 sing N N 49
ASN CG OD1 doub N N 50
ASN CG ND2 sing N N 51
ASN ND2 HD21 sing N N 52
ASN ND2 HD22 sing N N 53
ASN OXT HXT sing N N 54
ASP N CA sing N N 55
ASP N H sing N N 56
ASP N H2 sing N N 57
ASP CA C sing N N 58
ASP CA CB sing N N 59
ASP CA HA sing N N 60
ASP C O doub N N 61
ASP C OXT sing N N 62
ASP CB CG sing N N 63
ASP CB HB2 sing N N 64
ASP CB HB3 sing N N 65
ASP CG OD1 doub N N 66
ASP CG OD2 sing N N 67
ASP OD2 HD2 sing N N 68
ASP OXT HXT sing N N 69
CYS N CA sing N N 70
CYS N H sing N N 71
CYS N H2 sing N N 72
CYS CA C sing N N 73
CYS CA CB sing N N 74
CYS CA HA sing N N 75
CYS C O doub N N 76
CYS C OXT sing N N 77
CYS CB SG sing N N 78
CYS CB HB2 sing N N 79
CYS CB HB3 sing N N 80
CYS SG HG sing N N 81
CYS OXT HXT sing N N 82
DA OP3 P sing N N 83
DA OP3 HOP3 sing N N 84
DA P OP1 doub N N 85
DA P OP2 sing N N 86
DA P "O5'" sing N N 87
DA OP2 HOP2 sing N N 88
DA "O5'" "C5'" sing N N 89
DA "C5'" "C4'" sing N N 90
DA "C5'" "H5'" sing N N 91
DA "C5'" "H5''" sing N N 92
DA "C4'" "O4'" sing N N 93
DA "C4'" "C3'" sing N N 94
DA "C4'" "H4'" sing N N 95
DA "O4'" "C1'" sing N N 96
DA "C3'" "O3'" sing N N 97
DA "C3'" "C2'" sing N N 98
DA "C3'" "H3'" sing N N 99
DA "O3'" "HO3'" sing N N 100
DA "C2'" "C1'" sing N N 101
DA "C2'" "H2'" sing N N 102
DA "C2'" "H2''" sing N N 103
DA "C1'" N9 sing N N 104
DA "C1'" "H1'" sing N N 105
DA N9 C8 sing Y N 106
DA N9 C4 sing Y N 107
DA C8 N7 doub Y N 108
DA C8 H8 sing N N 109
DA N7 C5 sing Y N 110
DA C5 C6 sing Y N 111
DA C5 C4 doub Y N 112
DA C6 N6 sing N N 113
DA C6 N1 doub Y N 114
DA N6 H61 sing N N 115
DA N6 H62 sing N N 116
DA N1 C2 sing Y N 117
DA C2 N3 doub Y N 118
DA C2 H2 sing N N 119
DA N3 C4 sing Y N 120
DC OP3 P sing N N 121
DC OP3 HOP3 sing N N 122
DC P OP1 doub N N 123
DC P OP2 sing N N 124
DC P "O5'" sing N N 125
DC OP2 HOP2 sing N N 126
DC "O5'" "C5'" sing N N 127
DC "C5'" "C4'" sing N N 128
DC "C5'" "H5'" sing N N 129
DC "C5'" "H5''" sing N N 130
DC "C4'" "O4'" sing N N 131
DC "C4'" "C3'" sing N N 132
DC "C4'" "H4'" sing N N 133
DC "O4'" "C1'" sing N N 134
DC "C3'" "O3'" sing N N 135
DC "C3'" "C2'" sing N N 136
DC "C3'" "H3'" sing N N 137
DC "O3'" "HO3'" sing N N 138
DC "C2'" "C1'" sing N N 139
DC "C2'" "H2'" sing N N 140
DC "C2'" "H2''" sing N N 141
DC "C1'" N1 sing N N 142
DC "C1'" "H1'" sing N N 143
DC N1 C2 sing N N 144
DC N1 C6 sing N N 145
DC C2 O2 doub N N 146
DC C2 N3 sing N N 147
DC N3 C4 doub N N 148
DC C4 N4 sing N N 149
DC C4 C5 sing N N 150
DC N4 H41 sing N N 151
DC N4 H42 sing N N 152
DC C5 C6 doub N N 153
DC C5 H5 sing N N 154
DC C6 H6 sing N N 155
DG OP3 P sing N N 156
DG OP3 HOP3 sing N N 157
DG P OP1 doub N N 158
DG P OP2 sing N N 159
DG P "O5'" sing N N 160
DG OP2 HOP2 sing N N 161
DG "O5'" "C5'" sing N N 162
DG "C5'" "C4'" sing N N 163
DG "C5'" "H5'" sing N N 164
DG "C5'" "H5''" sing N N 165
DG "C4'" "O4'" sing N N 166
DG "C4'" "C3'" sing N N 167
DG "C4'" "H4'" sing N N 168
DG "O4'" "C1'" sing N N 169
DG "C3'" "O3'" sing N N 170
DG "C3'" "C2'" sing N N 171
DG "C3'" "H3'" sing N N 172
DG "O3'" "HO3'" sing N N 173
DG "C2'" "C1'" sing N N 174
DG "C2'" "H2'" sing N N 175
DG "C2'" "H2''" sing N N 176
DG "C1'" N9 sing N N 177
DG "C1'" "H1'" sing N N 178
DG N9 C8 sing Y N 179
DG N9 C4 sing Y N 180
DG C8 N7 doub Y N 181
DG C8 H8 sing N N 182
DG N7 C5 sing Y N 183
DG C5 C6 sing N N 184
DG C5 C4 doub Y N 185
DG C6 O6 doub N N 186
DG C6 N1 sing N N 187
DG N1 C2 sing N N 188
DG N1 H1 sing N N 189
DG C2 N2 sing N N 190
DG C2 N3 doub N N 191
DG N2 H21 sing N N 192
DG N2 H22 sing N N 193
DG N3 C4 sing N N 194
DT OP3 P sing N N 195
DT OP3 HOP3 sing N N 196
DT P OP1 doub N N 197
DT P OP2 sing N N 198
DT P "O5'" sing N N 199
DT OP2 HOP2 sing N N 200
DT "O5'" "C5'" sing N N 201
DT "C5'" "C4'" sing N N 202
DT "C5'" "H5'" sing N N 203
DT "C5'" "H5''" sing N N 204
DT "C4'" "O4'" sing N N 205
DT "C4'" "C3'" sing N N 206
DT "C4'" "H4'" sing N N 207
DT "O4'" "C1'" sing N N 208
DT "C3'" "O3'" sing N N 209
DT "C3'" "C2'" sing N N 210
DT "C3'" "H3'" sing N N 211
DT "O3'" "HO3'" sing N N 212
DT "C2'" "C1'" sing N N 213
DT "C2'" "H2'" sing N N 214
DT "C2'" "H2''" sing N N 215
DT "C1'" N1 sing N N 216
DT "C1'" "H1'" sing N N 217
DT N1 C2 sing N N 218
DT N1 C6 sing N N 219
DT C2 O2 doub N N 220
DT C2 N3 sing N N 221
DT N3 C4 sing N N 222
DT N3 H3 sing N N 223
DT C4 O4 doub N N 224
DT C4 C5 sing N N 225
DT C5 C7 sing N N 226
DT C5 C6 doub N N 227
DT C7 H71 sing N N 228
DT C7 H72 sing N N 229
DT C7 H73 sing N N 230
DT C6 H6 sing N N 231
GLN N CA sing N N 232
GLN N H sing N N 233
GLN N H2 sing N N 234
GLN CA C sing N N 235
GLN CA CB sing N N 236
GLN CA HA sing N N 237
GLN C O doub N N 238
GLN C OXT sing N N 239
GLN CB CG sing N N 240
GLN CB HB2 sing N N 241
GLN CB HB3 sing N N 242
GLN CG CD sing N N 243
GLN CG HG2 sing N N 244
GLN CG HG3 sing N N 245
GLN CD OE1 doub N N 246
GLN CD NE2 sing N N 247
GLN NE2 HE21 sing N N 248
GLN NE2 HE22 sing N N 249
GLN OXT HXT sing N N 250
GLU N CA sing N N 251
GLU N H sing N N 252
GLU N H2 sing N N 253
GLU CA C sing N N 254
GLU CA CB sing N N 255
GLU CA HA sing N N 256
GLU C O doub N N 257
GLU C OXT sing N N 258
GLU CB CG sing N N 259
GLU CB HB2 sing N N 260
GLU CB HB3 sing N N 261
GLU CG CD sing N N 262
GLU CG HG2 sing N N 263
GLU CG HG3 sing N N 264
GLU CD OE1 doub N N 265
GLU CD OE2 sing N N 266
GLU OE2 HE2 sing N N 267
GLU OXT HXT sing N N 268
GLY N CA sing N N 269
GLY N H sing N N 270
GLY N H2 sing N N 271
GLY CA C sing N N 272
GLY CA HA2 sing N N 273
GLY CA HA3 sing N N 274
GLY C O doub N N 275
GLY C OXT sing N N 276
GLY OXT HXT sing N N 277
HIS N CA sing N N 278
HIS N H sing N N 279
HIS N H2 sing N N 280
HIS CA C sing N N 281
HIS CA CB sing N N 282
HIS CA HA sing N N 283
HIS C O doub N N 284
HIS C OXT sing N N 285
HIS CB CG sing N N 286
HIS CB HB2 sing N N 287
HIS CB HB3 sing N N 288
HIS CG ND1 sing Y N 289
HIS CG CD2 doub Y N 290
HIS ND1 CE1 doub Y N 291
HIS ND1 HD1 sing N N 292
HIS CD2 NE2 sing Y N 293
HIS CD2 HD2 sing N N 294
HIS CE1 NE2 sing Y N 295
HIS CE1 HE1 sing N N 296
HIS NE2 HE2 sing N N 297
HIS OXT HXT sing N N 298
ILE N CA sing N N 299
ILE N H sing N N 300
ILE N H2 sing N N 301
ILE CA C sing N N 302
ILE CA CB sing N N 303
ILE CA HA sing N N 304
ILE C O doub N N 305
ILE C OXT sing N N 306
ILE CB CG1 sing N N 307
ILE CB CG2 sing N N 308
ILE CB HB sing N N 309
ILE CG1 CD1 sing N N 310
ILE CG1 HG12 sing N N 311
ILE CG1 HG13 sing N N 312
ILE CG2 HG21 sing N N 313
ILE CG2 HG22 sing N N 314
ILE CG2 HG23 sing N N 315
ILE CD1 HD11 sing N N 316
ILE CD1 HD12 sing N N 317
ILE CD1 HD13 sing N N 318
ILE OXT HXT sing N N 319
LEU N CA sing N N 320
LEU N H sing N N 321
LEU N H2 sing N N 322
LEU CA C sing N N 323
LEU CA CB sing N N 324
LEU CA HA sing N N 325
LEU C O doub N N 326
LEU C OXT sing N N 327
LEU CB CG sing N N 328
LEU CB HB2 sing N N 329
LEU CB HB3 sing N N 330
LEU CG CD1 sing N N 331
LEU CG CD2 sing N N 332
LEU CG HG sing N N 333
LEU CD1 HD11 sing N N 334
LEU CD1 HD12 sing N N 335
LEU CD1 HD13 sing N N 336
LEU CD2 HD21 sing N N 337
LEU CD2 HD22 sing N N 338
LEU CD2 HD23 sing N N 339
LEU OXT HXT sing N N 340
LYS N CA sing N N 341
LYS N H sing N N 342
LYS N H2 sing N N 343
LYS CA C sing N N 344
LYS CA CB sing N N 345
LYS CA HA sing N N 346
LYS C O doub N N 347
LYS C OXT sing N N 348
LYS CB CG sing N N 349
LYS CB HB2 sing N N 350
LYS CB HB3 sing N N 351
LYS CG CD sing N N 352
LYS CG HG2 sing N N 353
LYS CG HG3 sing N N 354
LYS CD CE sing N N 355
LYS CD HD2 sing N N 356
LYS CD HD3 sing N N 357
LYS CE NZ sing N N 358
LYS CE HE2 sing N N 359
LYS CE HE3 sing N N 360
LYS NZ HZ1 sing N N 361
LYS NZ HZ2 sing N N 362
LYS NZ HZ3 sing N N 363
LYS OXT HXT sing N N 364
MET N CA sing N N 365
MET N H sing N N 366
MET N H2 sing N N 367
MET CA C sing N N 368
MET CA CB sing N N 369
MET CA HA sing N N 370
MET C O doub N N 371
MET C OXT sing N N 372
MET CB CG sing N N 373
MET CB HB2 sing N N 374
MET CB HB3 sing N N 375
MET CG SD sing N N 376
MET CG HG2 sing N N 377
MET CG HG3 sing N N 378
MET SD CE sing N N 379
MET CE HE1 sing N N 380
MET CE HE2 sing N N 381
MET CE HE3 sing N N 382
MET OXT HXT sing N N 383
PHE N CA sing N N 384
PHE N H sing N N 385
PHE N H2 sing N N 386
PHE CA C sing N N 387
PHE CA CB sing N N 388
PHE CA HA sing N N 389
PHE C O doub N N 390
PHE C OXT sing N N 391
PHE CB CG sing N N 392
PHE CB HB2 sing N N 393
PHE CB HB3 sing N N 394
PHE CG CD1 doub Y N 395
PHE CG CD2 sing Y N 396
PHE CD1 CE1 sing Y N 397
PHE CD1 HD1 sing N N 398
PHE CD2 CE2 doub Y N 399
PHE CD2 HD2 sing N N 400
PHE CE1 CZ doub Y N 401
PHE CE1 HE1 sing N N 402
PHE CE2 CZ sing Y N 403
PHE CE2 HE2 sing N N 404
PHE CZ HZ sing N N 405
PHE OXT HXT sing N N 406
PRO N CA sing N N 407
PRO N CD sing N N 408
PRO N H sing N N 409
PRO CA C sing N N 410
PRO CA CB sing N N 411
PRO CA HA sing N N 412
PRO C O doub N N 413
PRO C OXT sing N N 414
PRO CB CG sing N N 415
PRO CB HB2 sing N N 416
PRO CB HB3 sing N N 417
PRO CG CD sing N N 418
PRO CG HG2 sing N N 419
PRO CG HG3 sing N N 420
PRO CD HD2 sing N N 421
PRO CD HD3 sing N N 422
PRO OXT HXT sing N N 423
SER N CA sing N N 424
SER N H sing N N 425
SER N H2 sing N N 426
SER CA C sing N N 427
SER CA CB sing N N 428
SER CA HA sing N N 429
SER C O doub N N 430
SER C OXT sing N N 431
SER CB OG sing N N 432
SER CB HB2 sing N N 433
SER CB HB3 sing N N 434
SER OG HG sing N N 435
SER OXT HXT sing N N 436
THR N CA sing N N 437
THR N H sing N N 438
THR N H2 sing N N 439
THR CA C sing N N 440
THR CA CB sing N N 441
THR CA HA sing N N 442
THR C O doub N N 443
THR C OXT sing N N 444
THR CB OG1 sing N N 445
THR CB CG2 sing N N 446
THR CB HB sing N N 447
THR OG1 HG1 sing N N 448
THR CG2 HG21 sing N N 449
THR CG2 HG22 sing N N 450
THR CG2 HG23 sing N N 451
THR OXT HXT sing N N 452
TRP N CA sing N N 453
TRP N H sing N N 454
TRP N H2 sing N N 455
TRP CA C sing N N 456
TRP CA CB sing N N 457
TRP CA HA sing N N 458
TRP C O doub N N 459
TRP C OXT sing N N 460
TRP CB CG sing N N 461
TRP CB HB2 sing N N 462
TRP CB HB3 sing N N 463
TRP CG CD1 doub Y N 464
TRP CG CD2 sing Y N 465
TRP CD1 NE1 sing Y N 466
TRP CD1 HD1 sing N N 467
TRP CD2 CE2 doub Y N 468
TRP CD2 CE3 sing Y N 469
TRP NE1 CE2 sing Y N 470
TRP NE1 HE1 sing N N 471
TRP CE2 CZ2 sing Y N 472
TRP CE3 CZ3 doub Y N 473
TRP CE3 HE3 sing N N 474
TRP CZ2 CH2 doub Y N 475
TRP CZ2 HZ2 sing N N 476
TRP CZ3 CH2 sing Y N 477
TRP CZ3 HZ3 sing N N 478
TRP CH2 HH2 sing N N 479
TRP OXT HXT sing N N 480
TYR N CA sing N N 481
TYR N H sing N N 482
TYR N H2 sing N N 483
TYR CA C sing N N 484
TYR CA CB sing N N 485
TYR CA HA sing N N 486
TYR C O doub N N 487
TYR C OXT sing N N 488
TYR CB CG sing N N 489
TYR CB HB2 sing N N 490
TYR CB HB3 sing N N 491
TYR CG CD1 doub Y N 492
TYR CG CD2 sing Y N 493
TYR CD1 CE1 sing Y N 494
TYR CD1 HD1 sing N N 495
TYR CD2 CE2 doub Y N 496
TYR CD2 HD2 sing N N 497
TYR CE1 CZ doub Y N 498
TYR CE1 HE1 sing N N 499
TYR CE2 CZ sing Y N 500
TYR CE2 HE2 sing N N 501
TYR CZ OH sing N N 502
TYR OH HH sing N N 503
TYR OXT HXT sing N N 504
VAL N CA sing N N 505
VAL N H sing N N 506
VAL N H2 sing N N 507
VAL CA C sing N N 508
VAL CA CB sing N N 509
VAL CA HA sing N N 510
VAL C O doub N N 511
VAL C OXT sing N N 512
VAL CB CG1 sing N N 513
VAL CB CG2 sing N N 514
VAL CB HB sing N N 515
VAL CG1 HG11 sing N N 516
VAL CG1 HG12 sing N N 517
VAL CG1 HG13 sing N N 518
VAL CG2 HG21 sing N N 519
VAL CG2 HG22 sing N N 520
VAL CG2 HG23 sing N N 521
VAL OXT HXT sing N N 522
#
_atom_sites.entry_id 4DPV
_atom_sites.fract_transf_matrix[1][1] 0.003799
_atom_sites.fract_transf_matrix[1][2] 0.000000
_atom_sites.fract_transf_matrix[1][3] 0.000054
_atom_sites.fract_transf_vector[1] 0.000000
_atom_sites.fract_transf_matrix[2][1] 0.000000
_atom_sites.fract_transf_matrix[2][2] 0.002865
_atom_sites.fract_transf_matrix[2][3] 0.000000
_atom_sites.fract_transf_vector[2] 0.000000
_atom_sites.fract_transf_matrix[3][1] 0.000000
_atom_sites.fract_transf_matrix[3][2] 0.000000
_atom_sites.fract_transf_matrix[3][3] 0.003741
_atom_sites.fract_transf_vector[3] 0.000000
#
loop_
_atom_type.symbol
C
MG
N
O
P
S
#
loop_