data_4DQG # _entry.id 4DQG # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.287 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 4DQG RCSB RCSB070654 WWPDB D_1000070654 # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 4DQB . unspecified PDB 4DQC . unspecified PDB 4DQE . unspecified PDB 4DQF . unspecified PDB 4DQH . unspecified # _pdbx_database_status.entry_id 4DQG _pdbx_database_status.status_code REL _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2012-02-15 _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Schiffer, C.A.' 1 'Mittal, S.' 2 # _citation.id primary _citation.title 'Hydrophobic core flexibility modulates enzyme activity in HIV-1 protease.' _citation.journal_abbrev J.Am.Chem.Soc. _citation.journal_volume 134 _citation.page_first 4163 _citation.page_last 4168 _citation.year 2012 _citation.journal_id_ASTM JACSAT _citation.country US _citation.journal_id_ISSN 0002-7863 _citation.journal_id_CSD 0004 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 22295904 _citation.pdbx_database_id_DOI 10.1021/ja2095766 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Mittal, S.' 1 primary 'Cai, Y.' 2 primary 'Nalam, M.N.' 3 primary 'Bolon, D.N.' 4 primary 'Schiffer, C.A.' 5 # _cell.entry_id 4DQG _cell.length_a 51.472 _cell.length_b 58.168 _cell.length_c 61.043 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4DQG _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Aspartyl protease' 10803.778 2 ? ? ? ? 2 non-polymer syn N-HYDROXYGUANIDINE 75.070 1 ? ? ? ? 3 non-polymer syn GLYCEROL 92.094 3 ? ? ? ? 4 non-polymer syn 'OXYGEN MOLECULE' 31.999 1 ? ? ? ? 5 non-polymer syn 'ACETATE ION' 59.044 1 ? ? ? ? 6 non-polymer syn 'PHOSPHATE ION' 94.971 1 ? ? ? ? 7 water nat water 18.015 16 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;PQITLWKRPLVTIRICGQLKEALLDTGADDTVIEEMNCPGKWKPKMIGGIGGFIKVRQYDQIIIEIAGHKAIGTVLVGPT PVNIIGRNLLTQIGATLNF ; _entity_poly.pdbx_seq_one_letter_code_can ;PQITLWKRPLVTIRICGQLKEALLDTGADDTVIEEMNCPGKWKPKMIGGIGGFIKVRQYDQIIIEIAGHKAIGTVLVGPT PVNIIGRNLLTQIGATLNF ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 PRO n 1 2 GLN n 1 3 ILE n 1 4 THR n 1 5 LEU n 1 6 TRP n 1 7 LYS n 1 8 ARG n 1 9 PRO n 1 10 LEU n 1 11 VAL n 1 12 THR n 1 13 ILE n 1 14 ARG n 1 15 ILE n 1 16 CYS n 1 17 GLY n 1 18 GLN n 1 19 LEU n 1 20 LYS n 1 21 GLU n 1 22 ALA n 1 23 LEU n 1 24 LEU n 1 25 ASP n 1 26 THR n 1 27 GLY n 1 28 ALA n 1 29 ASP n 1 30 ASP n 1 31 THR n 1 32 VAL n 1 33 ILE n 1 34 GLU n 1 35 GLU n 1 36 MET n 1 37 ASN n 1 38 CYS n 1 39 PRO n 1 40 GLY n 1 41 LYS n 1 42 TRP n 1 43 LYS n 1 44 PRO n 1 45 LYS n 1 46 MET n 1 47 ILE n 1 48 GLY n 1 49 GLY n 1 50 ILE n 1 51 GLY n 1 52 GLY n 1 53 PHE n 1 54 ILE n 1 55 LYS n 1 56 VAL n 1 57 ARG n 1 58 GLN n 1 59 TYR n 1 60 ASP n 1 61 GLN n 1 62 ILE n 1 63 ILE n 1 64 ILE n 1 65 GLU n 1 66 ILE n 1 67 ALA n 1 68 GLY n 1 69 HIS n 1 70 LYS n 1 71 ALA n 1 72 ILE n 1 73 GLY n 1 74 THR n 1 75 VAL n 1 76 LEU n 1 77 VAL n 1 78 GLY n 1 79 PRO n 1 80 THR n 1 81 PRO n 1 82 VAL n 1 83 ASN n 1 84 ILE n 1 85 ILE n 1 86 GLY n 1 87 ARG n 1 88 ASN n 1 89 LEU n 1 90 LEU n 1 91 THR n 1 92 GLN n 1 93 ILE n 1 94 GLY n 1 95 ALA n 1 96 THR n 1 97 LEU n 1 98 ASN n 1 99 PHE n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name HIV-1 _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene gag-pol _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain SF2 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Human immunodeficiency virus 1' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 11676 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain TAP56 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pXC35 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 4DQG _struct_ref.pdbx_db_accession 4DQG _struct_ref.entity_id 1 _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4DQG A 1 ? 99 ? 4DQG 1 ? 99 ? 1 99 2 1 4DQG B 1 ? 99 ? 4DQG 1 ? 99 ? 1 99 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ACT non-polymer . 'ACETATE ION' ? 'C2 H3 O2 -1' 59.044 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HGU non-polymer . N-HYDROXYGUANIDINE ? 'C H5 N3 O' 75.070 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 OXY non-polymer . 'OXYGEN MOLECULE' ? O2 31.999 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PO4 non-polymer . 'PHOSPHATE ION' ? 'O4 P -3' 94.971 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 4DQG _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.11 _exptl_crystal.density_percent_sol 41.83 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 5.0 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '50mM Citrate phosphate buffer pH 5.0, 7% DMSO, 27-35% Ammonium Sulfate, VAPOR DIFFUSION, HANGING DROP, temperature 298K' # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.pdbx_collection_date 2009-03-03 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l ? _diffrn_radiation.monochromator 'Bent Ge(111)' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 14-BM-C' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 14-BM-C _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.9 # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 4DQG _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 50.000 _reflns.d_resolution_high 2.650 _reflns.number_obs 5552 _reflns.number_all ? _reflns.percent_possible_obs 97.900 _reflns.pdbx_Rmerge_I_obs 0.098 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 8.100 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 5.700 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? # loop_ _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_ordinal _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.percent_possible_all _reflns_shell.Rmerge_I_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_unique_obs _reflns_shell.pdbx_chi_squared 1 1 2.650 2.740 98.900 0.460 ? ? 5.700 ? ? ? ? ? ? 1 2 2.740 2.850 98.200 0.396 ? ? 5.700 ? ? ? ? ? ? 1 3 2.850 2.980 97.800 0.296 ? ? 5.700 ? ? ? ? ? ? 1 4 2.980 3.140 96.900 0.219 ? ? 5.700 ? ? ? ? ? ? 1 5 3.140 3.340 96.400 0.178 ? ? 5.800 ? ? ? ? ? ? 1 6 3.340 3.600 95.900 0.131 ? ? 5.700 ? ? ? ? ? ? 1 7 3.600 3.960 96.100 0.097 ? ? 5.600 ? ? ? ? ? ? 1 8 3.960 4.530 99.100 0.068 ? ? 5.700 ? ? ? ? ? ? 1 9 4.530 5.710 99.700 0.053 ? ? 5.800 ? ? ? ? ? ? 1 10 5.710 50.000 99.400 0.044 ? ? 5.400 ? ? ? ? ? ? # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 4DQG _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 4535 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F . _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 42.11 _refine.ls_d_res_high 2.79 _refine.ls_percent_reflns_obs 97.86 _refine.ls_R_factor_obs 0.20056 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.19767 _refine.ls_R_factor_R_free 0.26174 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.6 _refine.ls_number_reflns_R_free 220 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min 0.500 _refine.occupancy_max 1.000 _refine.correlation_coeff_Fo_to_Fc 0.937 _refine.correlation_coeff_Fo_to_Fc_free 0.906 _refine.B_iso_mean 26.566 _refine.aniso_B[1][1] 0.16 _refine.aniso_B[2][2] 0.34 _refine.aniso_B[3][3] -0.49 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free 0.431 _refine.overall_SU_ML 0.293 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 31.991 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1456 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 34 _refine_hist.number_atoms_solvent 16 _refine_hist.number_atoms_total 1506 _refine_hist.d_res_high 2.79 _refine_hist.d_res_low 42.11 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.008 0.019 ? 1511 'X-RAY DIFFRACTION' ? r_bond_other_d 0.007 0.020 ? 990 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.387 1.984 ? 2057 'X-RAY DIFFRACTION' ? r_angle_other_deg 0.821 3.003 ? 2426 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 6.303 5.000 ? 196 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 40.504 24.286 ? 49 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 16.653 15.000 ? 234 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 14.374 15.000 ? 8 'X-RAY DIFFRACTION' ? r_chiral_restr 0.067 0.200 ? 253 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.004 0.021 ? 1655 'X-RAY DIFFRACTION' ? r_gen_planes_other 0.002 0.020 ? 281 'X-RAY DIFFRACTION' ? r_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 0.654 1.500 ? 988 'X-RAY DIFFRACTION' ? r_mcbond_other 0.098 1.500 ? 417 'X-RAY DIFFRACTION' ? r_mcangle_it 1.254 2.000 ? 1589 'X-RAY DIFFRACTION' ? r_scbond_it 1.795 3.000 ? 521 'X-RAY DIFFRACTION' ? r_scangle_it 3.144 4.500 ? 468 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.795 _refine_ls_shell.d_res_low 2.867 _refine_ls_shell.number_reflns_R_work 268 _refine_ls_shell.R_factor_R_work 0.269 _refine_ls_shell.percent_reflns_obs 93.51 _refine_ls_shell.R_factor_R_free 0.339 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 20 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_obs ? # _struct.entry_id 4DQG _struct.title 'Crystal Structure of apo(G16C/L38C) HIV-1 Protease' _struct.pdbx_descriptor 'Wild-type HIV-1 protease dimer' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4DQG _struct_keywords.text 'HIV-1 protease, drug resistance, drug design, Protease inhibitors, AIDS, HYDROLASE-HYDROLASE INHIBITOR complex' _struct_keywords.pdbx_keywords 'HYDROLASE/HYDROLASE INHIBITOR' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 3 ? F N N 4 ? G N N 3 ? H N N 5 ? I N N 6 ? J N N 7 ? K N N 7 ? # _struct_biol.id 1 _struct_biol.details 'biological unit is the same as asym.' # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLY A 86 ? THR A 91 ? GLY A 86 THR A 91 1 ? 6 HELX_P HELX_P2 2 GLY B 86 ? THR B 91 ? GLY B 86 THR B 91 1 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf1 disulf ? ? A CYS 38 SG ? ? ? 1_555 A CYS 16 SG ? ? A CYS 38 A CYS 16 1_555 ? ? ? ? ? ? ? 2.010 ? disulf2 disulf ? ? B CYS 38 SG ? ? ? 1_555 B CYS 16 SG ? ? B CYS 38 B CYS 16 1_555 ? ? ? ? ? ? ? 2.036 ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 8 ? C ? 8 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? parallel B 4 5 ? anti-parallel B 5 6 ? parallel B 6 7 ? anti-parallel B 7 8 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel C 3 4 ? parallel C 4 5 ? anti-parallel C 5 6 ? parallel C 6 7 ? anti-parallel C 7 8 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLN A 2 ? THR A 4 ? GLN A 2 THR A 4 A 2 THR B 96 ? ASN B 98 ? THR B 96 ASN B 98 A 3 THR A 96 ? ASN A 98 ? THR A 96 ASN A 98 A 4 GLN B 2 ? THR B 4 ? GLN B 2 THR B 4 B 1 LYS A 43 ? GLY A 48 ? LYS A 43 GLY A 48 B 2 PHE A 53 ? ILE A 66 ? PHE A 53 ILE A 66 B 3 HIS A 69 ? VAL A 77 ? HIS A 69 VAL A 77 B 4 THR A 31 ? ILE A 33 ? THR A 31 ILE A 33 B 5 ILE A 84 ? ILE A 85 ? ILE A 84 ILE A 85 B 6 GLN A 18 ? LEU A 24 ? GLN A 18 LEU A 24 B 7 LEU A 10 ? ILE A 15 ? LEU A 10 ILE A 15 B 8 PHE A 53 ? ILE A 66 ? PHE A 53 ILE A 66 C 1 LYS B 43 ? GLY B 49 ? LYS B 43 GLY B 49 C 2 GLY B 52 ? ILE B 66 ? GLY B 52 ILE B 66 C 3 HIS B 69 ? VAL B 77 ? HIS B 69 VAL B 77 C 4 VAL B 32 ? ILE B 33 ? VAL B 32 ILE B 33 C 5 ILE B 84 ? ILE B 85 ? ILE B 84 ILE B 85 C 6 GLN B 18 ? LEU B 24 ? GLN B 18 LEU B 24 C 7 LEU B 10 ? ILE B 15 ? LEU B 10 ILE B 15 C 8 GLY B 52 ? ILE B 66 ? GLY B 52 ILE B 66 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ILE A 3 ? N ILE A 3 O LEU B 97 ? O LEU B 97 A 2 3 O ASN B 98 ? O ASN B 98 N THR A 96 ? N THR A 96 A 3 4 N LEU A 97 ? N LEU A 97 O ILE B 3 ? O ILE B 3 B 1 2 N LYS A 45 ? N LYS A 45 O VAL A 56 ? O VAL A 56 B 2 3 N ILE A 62 ? N ILE A 62 O GLY A 73 ? O GLY A 73 B 3 4 O LEU A 76 ? O LEU A 76 N ILE A 33 ? N ILE A 33 B 4 5 N VAL A 32 ? N VAL A 32 O ILE A 84 ? O ILE A 84 B 5 6 O ILE A 85 ? O ILE A 85 N LEU A 23 ? N LEU A 23 B 6 7 O LYS A 20 ? O LYS A 20 N ILE A 13 ? N ILE A 13 B 7 8 N ARG A 14 ? N ARG A 14 O GLU A 65 ? O GLU A 65 C 1 2 N LYS B 43 ? N LYS B 43 O GLN B 58 ? O GLN B 58 C 2 3 N ILE B 66 ? N ILE B 66 O HIS B 69 ? O HIS B 69 C 3 4 O LEU B 76 ? O LEU B 76 N ILE B 33 ? N ILE B 33 C 4 5 N VAL B 32 ? N VAL B 32 O ILE B 84 ? O ILE B 84 C 5 6 O ILE B 85 ? O ILE B 85 N LEU B 23 ? N LEU B 23 C 6 7 O ALA B 22 ? O ALA B 22 N VAL B 11 ? N VAL B 11 C 7 8 N ARG B 14 ? N ARG B 14 O GLU B 65 ? O GLU B 65 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 6 'BINDING SITE FOR RESIDUE HGU A 101' AC2 Software ? ? ? ? 3 'BINDING SITE FOR RESIDUE GOL A 102' AC3 Software ? ? ? ? 5 'BINDING SITE FOR RESIDUE GOL A 103' AC4 Software ? ? ? ? 1 'BINDING SITE FOR RESIDUE OXY A 104' AC5 Software ? ? ? ? 3 'BINDING SITE FOR RESIDUE GOL B 101' AC6 Software ? ? ? ? 3 'BINDING SITE FOR RESIDUE ACT B 102' AC7 Software ? ? ? ? 2 'BINDING SITE FOR RESIDUE PO4 B 103' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 ARG A 14 ? ARG A 14 . ? 1_555 ? 2 AC1 6 ILE A 15 ? ILE A 15 . ? 1_555 ? 3 AC1 6 CYS A 16 ? CYS A 16 . ? 1_555 ? 4 AC1 6 GLY A 17 ? GLY A 17 . ? 1_555 ? 5 AC1 6 ILE A 63 ? ILE A 63 . ? 1_555 ? 6 AC1 6 ARG B 14 ? ARG B 14 . ? 1_455 ? 7 AC2 3 ASP A 25 ? ASP A 25 . ? 1_555 ? 8 AC2 3 GOL E . ? GOL A 103 . ? 1_555 ? 9 AC2 3 ASP B 25 ? ASP B 25 . ? 1_555 ? 10 AC3 5 ALA A 28 ? ALA A 28 . ? 1_555 ? 11 AC3 5 ASP A 29 ? ASP A 29 . ? 1_555 ? 12 AC3 5 ASP A 30 ? ASP A 30 . ? 1_555 ? 13 AC3 5 GLY A 48 ? GLY A 48 . ? 1_555 ? 14 AC3 5 GOL D . ? GOL A 102 . ? 1_555 ? 15 AC4 1 CYS A 38 ? CYS A 38 . ? 1_555 ? 16 AC5 3 ASP B 29 ? ASP B 29 . ? 1_555 ? 17 AC5 3 ASP B 30 ? ASP B 30 . ? 1_555 ? 18 AC5 3 GLY B 48 ? GLY B 48 . ? 1_555 ? 19 AC6 3 PRO B 1 ? PRO B 1 . ? 1_555 ? 20 AC6 3 ARG B 57 ? ARG B 57 . ? 2_554 ? 21 AC6 3 HIS B 69 ? HIS B 69 . ? 1_555 ? 22 AC7 2 LYS B 7 ? LYS B 7 . ? 1_555 ? 23 AC7 2 ARG B 8 ? ARG B 8 . ? 1_555 ? # _atom_sites.entry_id 4DQG _atom_sites.fract_transf_matrix[1][1] 0.019428 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.017192 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.016382 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 PRO 1 1 1 PRO PRO A . n A 1 2 GLN 2 2 2 GLN GLN A . n A 1 3 ILE 3 3 3 ILE ILE A . n A 1 4 THR 4 4 4 THR THR A . n A 1 5 LEU 5 5 5 LEU LEU A . n A 1 6 TRP 6 6 6 TRP TRP A . n A 1 7 LYS 7 7 7 LYS LYS A . n A 1 8 ARG 8 8 8 ARG ARG A . n A 1 9 PRO 9 9 9 PRO PRO A . n A 1 10 LEU 10 10 10 LEU LEU A . n A 1 11 VAL 11 11 11 VAL VAL A . n A 1 12 THR 12 12 12 THR THR A . n A 1 13 ILE 13 13 13 ILE ILE A . n A 1 14 ARG 14 14 14 ARG ARG A . n A 1 15 ILE 15 15 15 ILE ILE A . n A 1 16 CYS 16 16 16 CYS CYS A . n A 1 17 GLY 17 17 17 GLY GLY A . n A 1 18 GLN 18 18 18 GLN GLN A . n A 1 19 LEU 19 19 19 LEU LEU A . n A 1 20 LYS 20 20 20 LYS LYS A . n A 1 21 GLU 21 21 21 GLU GLU A . n A 1 22 ALA 22 22 22 ALA ALA A . n A 1 23 LEU 23 23 23 LEU LEU A . n A 1 24 LEU 24 24 24 LEU LEU A . n A 1 25 ASP 25 25 25 ASP ASP A . n A 1 26 THR 26 26 26 THR THR A . n A 1 27 GLY 27 27 27 GLY GLY A . n A 1 28 ALA 28 28 28 ALA ALA A . n A 1 29 ASP 29 29 29 ASP ASP A . n A 1 30 ASP 30 30 30 ASP ASP A . n A 1 31 THR 31 31 31 THR THR A . n A 1 32 VAL 32 32 32 VAL VAL A . n A 1 33 ILE 33 33 33 ILE ILE A . n A 1 34 GLU 34 34 34 GLU GLU A . n A 1 35 GLU 35 35 35 GLU GLU A . n A 1 36 MET 36 36 36 MET MET A . n A 1 37 ASN 37 37 37 ASN ASN A . n A 1 38 CYS 38 38 38 CYS CYS A . n A 1 39 PRO 39 39 39 PRO PRO A . n A 1 40 GLY 40 40 40 GLY GLY A . n A 1 41 LYS 41 41 41 LYS LYS A . n A 1 42 TRP 42 42 42 TRP TRP A . n A 1 43 LYS 43 43 43 LYS LYS A . n A 1 44 PRO 44 44 44 PRO PRO A . n A 1 45 LYS 45 45 45 LYS LYS A . n A 1 46 MET 46 46 46 MET MET A . n A 1 47 ILE 47 47 47 ILE ILE A . n A 1 48 GLY 48 48 48 GLY GLY A . n A 1 49 GLY 49 49 49 GLY GLY A . n A 1 50 ILE 50 50 50 ILE ILE A . n A 1 51 GLY 51 51 51 GLY GLY A . n A 1 52 GLY 52 52 52 GLY GLY A . n A 1 53 PHE 53 53 53 PHE PHE A . n A 1 54 ILE 54 54 54 ILE ILE A . n A 1 55 LYS 55 55 55 LYS LYS A . n A 1 56 VAL 56 56 56 VAL VAL A . n A 1 57 ARG 57 57 57 ARG ARG A . n A 1 58 GLN 58 58 58 GLN GLN A . n A 1 59 TYR 59 59 59 TYR TYR A . n A 1 60 ASP 60 60 60 ASP ASP A . n A 1 61 GLN 61 61 61 GLN GLN A . n A 1 62 ILE 62 62 62 ILE ILE A . n A 1 63 ILE 63 63 63 ILE ILE A . n A 1 64 ILE 64 64 64 ILE ILE A . n A 1 65 GLU 65 65 65 GLU GLU A . n A 1 66 ILE 66 66 66 ILE ILE A . n A 1 67 ALA 67 67 67 ALA ALA A . n A 1 68 GLY 68 68 68 GLY GLY A . n A 1 69 HIS 69 69 69 HIS HIS A . n A 1 70 LYS 70 70 70 LYS LYS A . n A 1 71 ALA 71 71 71 ALA ALA A . n A 1 72 ILE 72 72 72 ILE ILE A . n A 1 73 GLY 73 73 73 GLY GLY A . n A 1 74 THR 74 74 74 THR THR A . n A 1 75 VAL 75 75 75 VAL VAL A . n A 1 76 LEU 76 76 76 LEU LEU A . n A 1 77 VAL 77 77 77 VAL VAL A . n A 1 78 GLY 78 78 78 GLY GLY A . n A 1 79 PRO 79 79 79 PRO PRO A . n A 1 80 THR 80 80 80 THR THR A . n A 1 81 PRO 81 81 81 PRO PRO A . n A 1 82 VAL 82 82 82 VAL VAL A . n A 1 83 ASN 83 83 83 ASN ASN A . n A 1 84 ILE 84 84 84 ILE ILE A . n A 1 85 ILE 85 85 85 ILE ILE A . n A 1 86 GLY 86 86 86 GLY GLY A . n A 1 87 ARG 87 87 87 ARG ARG A . n A 1 88 ASN 88 88 88 ASN ASN A . n A 1 89 LEU 89 89 89 LEU LEU A . n A 1 90 LEU 90 90 90 LEU LEU A . n A 1 91 THR 91 91 91 THR THR A . n A 1 92 GLN 92 92 92 GLN GLN A . n A 1 93 ILE 93 93 93 ILE ILE A . n A 1 94 GLY 94 94 94 GLY GLY A . n A 1 95 ALA 95 95 95 ALA ALA A . n A 1 96 THR 96 96 96 THR THR A . n A 1 97 LEU 97 97 97 LEU LEU A . n A 1 98 ASN 98 98 98 ASN ASN A . n A 1 99 PHE 99 99 99 PHE PHE A . n B 1 1 PRO 1 1 1 PRO PRO B . n B 1 2 GLN 2 2 2 GLN GLN B . n B 1 3 ILE 3 3 3 ILE ILE B . n B 1 4 THR 4 4 4 THR THR B . n B 1 5 LEU 5 5 5 LEU LEU B . n B 1 6 TRP 6 6 6 TRP TRP B . n B 1 7 LYS 7 7 7 LYS LYS B . n B 1 8 ARG 8 8 8 ARG ARG B . n B 1 9 PRO 9 9 9 PRO PRO B . n B 1 10 LEU 10 10 10 LEU LEU B . n B 1 11 VAL 11 11 11 VAL VAL B . n B 1 12 THR 12 12 12 THR THR B . n B 1 13 ILE 13 13 13 ILE ILE B . n B 1 14 ARG 14 14 14 ARG ARG B . n B 1 15 ILE 15 15 15 ILE ILE B . n B 1 16 CYS 16 16 16 CYS CYS B . n B 1 17 GLY 17 17 17 GLY GLY B . n B 1 18 GLN 18 18 18 GLN GLN B . n B 1 19 LEU 19 19 19 LEU LEU B . n B 1 20 LYS 20 20 20 LYS LYS B . n B 1 21 GLU 21 21 21 GLU GLU B . n B 1 22 ALA 22 22 22 ALA ALA B . n B 1 23 LEU 23 23 23 LEU LEU B . n B 1 24 LEU 24 24 24 LEU LEU B . n B 1 25 ASP 25 25 25 ASP ASP B . n B 1 26 THR 26 26 26 THR THR B . n B 1 27 GLY 27 27 27 GLY GLY B . n B 1 28 ALA 28 28 28 ALA ALA B . n B 1 29 ASP 29 29 29 ASP ASP B . n B 1 30 ASP 30 30 30 ASP ASP B . n B 1 31 THR 31 31 31 THR THR B . n B 1 32 VAL 32 32 32 VAL VAL B . n B 1 33 ILE 33 33 33 ILE ILE B . n B 1 34 GLU 34 34 34 GLU GLU B . n B 1 35 GLU 35 35 35 GLU GLU B . n B 1 36 MET 36 36 36 MET MET B . n B 1 37 ASN 37 37 37 ASN ASN B . n B 1 38 CYS 38 38 38 CYS CYS B . n B 1 39 PRO 39 39 39 PRO PRO B . n B 1 40 GLY 40 40 40 GLY GLY B . n B 1 41 LYS 41 41 41 LYS LYS B . n B 1 42 TRP 42 42 42 TRP TRP B . n B 1 43 LYS 43 43 43 LYS LYS B . n B 1 44 PRO 44 44 44 PRO PRO B . n B 1 45 LYS 45 45 45 LYS LYS B . n B 1 46 MET 46 46 46 MET MET B . n B 1 47 ILE 47 47 47 ILE ILE B . n B 1 48 GLY 48 48 48 GLY GLY B . n B 1 49 GLY 49 49 49 GLY GLY B . n B 1 50 ILE 50 50 50 ILE ILE B . n B 1 51 GLY 51 51 51 GLY GLY B . n B 1 52 GLY 52 52 52 GLY GLY B . n B 1 53 PHE 53 53 53 PHE PHE B . n B 1 54 ILE 54 54 54 ILE ILE B . n B 1 55 LYS 55 55 55 LYS LYS B . n B 1 56 VAL 56 56 56 VAL VAL B . n B 1 57 ARG 57 57 57 ARG ARG B . n B 1 58 GLN 58 58 58 GLN GLN B . n B 1 59 TYR 59 59 59 TYR TYR B . n B 1 60 ASP 60 60 60 ASP ASP B . n B 1 61 GLN 61 61 61 GLN GLN B . n B 1 62 ILE 62 62 62 ILE ILE B . n B 1 63 ILE 63 63 63 ILE ILE B . n B 1 64 ILE 64 64 64 ILE ILE B . n B 1 65 GLU 65 65 65 GLU GLU B . n B 1 66 ILE 66 66 66 ILE ILE B . n B 1 67 ALA 67 67 67 ALA ALA B . n B 1 68 GLY 68 68 68 GLY GLY B . n B 1 69 HIS 69 69 69 HIS HIS B . n B 1 70 LYS 70 70 70 LYS LYS B . n B 1 71 ALA 71 71 71 ALA ALA B . n B 1 72 ILE 72 72 72 ILE ILE B . n B 1 73 GLY 73 73 73 GLY GLY B . n B 1 74 THR 74 74 74 THR THR B . n B 1 75 VAL 75 75 75 VAL VAL B . n B 1 76 LEU 76 76 76 LEU LEU B . n B 1 77 VAL 77 77 77 VAL VAL B . n B 1 78 GLY 78 78 78 GLY GLY B . n B 1 79 PRO 79 79 79 PRO PRO B . n B 1 80 THR 80 80 80 THR THR B . n B 1 81 PRO 81 81 81 PRO PRO B . n B 1 82 VAL 82 82 82 VAL VAL B . n B 1 83 ASN 83 83 83 ASN ASN B . n B 1 84 ILE 84 84 84 ILE ILE B . n B 1 85 ILE 85 85 85 ILE ILE B . n B 1 86 GLY 86 86 86 GLY GLY B . n B 1 87 ARG 87 87 87 ARG ARG B . n B 1 88 ASN 88 88 88 ASN ASN B . n B 1 89 LEU 89 89 89 LEU LEU B . n B 1 90 LEU 90 90 90 LEU LEU B . n B 1 91 THR 91 91 91 THR THR B . n B 1 92 GLN 92 92 92 GLN GLN B . n B 1 93 ILE 93 93 93 ILE ILE B . n B 1 94 GLY 94 94 94 GLY GLY B . n B 1 95 ALA 95 95 95 ALA ALA B . n B 1 96 THR 96 96 96 THR THR B . n B 1 97 LEU 97 97 97 LEU LEU B . n B 1 98 ASN 98 98 98 ASN ASN B . n B 1 99 PHE 99 99 99 PHE PHE B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 HGU 1 101 2 HGU HGU A . D 3 GOL 1 102 3 GOL GOL A . E 3 GOL 1 103 6 GOL GOL A . F 4 OXY 1 104 7 OXY OXY A . G 3 GOL 1 101 1 GOL GOL B . H 5 ACT 1 102 4 ACT ACT B . I 6 PO4 1 103 5 PO4 PO4 B . J 7 HOH 1 201 5 HOH HOH A . J 7 HOH 2 202 6 HOH HOH A . J 7 HOH 3 203 7 HOH HOH A . J 7 HOH 4 204 8 HOH HOH A . J 7 HOH 5 205 9 HOH HOH A . J 7 HOH 6 206 10 HOH HOH A . J 7 HOH 7 207 12 HOH HOH A . J 7 HOH 8 208 13 HOH HOH A . J 7 HOH 9 209 14 HOH HOH A . J 7 HOH 10 210 15 HOH HOH A . J 7 HOH 11 211 18 HOH HOH A . K 7 HOH 1 201 2 HOH HOH B . K 7 HOH 2 202 3 HOH HOH B . K 7 HOH 3 203 11 HOH HOH B . K 7 HOH 4 204 16 HOH HOH B . K 7 HOH 5 205 17 HOH HOH B . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 4580 ? 1 MORE -20 ? 1 'SSA (A^2)' 9150 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2012-03-07 2 'Structure model' 1 1 2012-05-02 3 'Structure model' 1 2 2017-11-15 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Refinement description' # _pdbx_audit_revision_category.ordinal 1 _pdbx_audit_revision_category.revision_ordinal 3 _pdbx_audit_revision_category.data_content_type 'Structure model' _pdbx_audit_revision_category.category software # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_software.classification' 2 3 'Structure model' '_software.contact_author' 3 3 'Structure model' '_software.contact_author_email' 4 3 'Structure model' '_software.date' 5 3 'Structure model' '_software.language' 6 3 'Structure model' '_software.location' 7 3 'Structure model' '_software.name' 8 3 'Structure model' '_software.type' 9 3 'Structure model' '_software.version' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined -5.7303 14.9104 -23.5730 0.1412 0.2169 0.1060 -0.0587 -0.0356 -0.0164 6.3150 1.2701 7.8321 -2.7986 7.0288 -3.1124 -0.2151 -0.1531 -0.0906 0.0894 0.2169 0.0395 -0.3420 -0.1716 -0.0017 'X-RAY DIFFRACTION' 2 ? refined -10.7734 10.5523 -16.4038 0.2998 0.1752 0.3744 -0.1434 -0.1063 0.1138 1.4764 3.1685 6.8503 0.7875 2.1876 4.3138 0.4602 -0.2756 -0.6586 -0.0613 0.2755 -0.1633 0.2623 0.0322 -0.7356 'X-RAY DIFFRACTION' 3 ? refined -26.4842 4.9439 -18.4158 0.2908 0.4956 0.1398 0.1677 0.0481 0.1654 0.6381 14.2290 0.4890 2.9831 0.3224 1.2071 -0.2473 0.0475 0.0864 -0.4569 0.4587 0.5417 -0.2699 -0.3612 -0.2114 'X-RAY DIFFRACTION' 4 ? refined -17.7654 7.3923 -16.1247 0.0392 0.0898 0.0834 0.0211 -0.0010 -0.0705 13.1134 4.9829 2.9879 -5.8471 0.6884 1.0426 -0.0102 -0.6917 0.7475 -0.0937 0.1159 -0.2528 -0.0855 0.0769 -0.1057 'X-RAY DIFFRACTION' 5 ? refined -8.3819 -2.1821 -21.0647 0.0442 0.2575 0.1316 0.0176 0.0322 0.1088 7.3522 21.8914 4.9370 12.3061 1.1601 -0.3856 0.2023 -0.2299 -0.3097 0.1950 -0.3295 -0.4872 0.2334 0.2938 0.1272 'X-RAY DIFFRACTION' 6 ? refined -19.6463 -1.6271 -13.8866 0.0830 0.0980 0.0739 -0.0183 -0.0040 0.0340 7.2719 9.0394 10.6662 0.8002 7.2331 -4.7783 -0.0102 -0.7136 0.0121 0.4750 0.1095 0.3392 -0.4149 -0.7634 -0.0993 'X-RAY DIFFRACTION' 7 ? refined -28.3531 -8.4640 -14.3635 0.4210 0.3657 0.3731 -0.2153 0.1003 -0.1062 13.0651 5.5033 14.1897 -4.0010 -7.3669 8.2563 -0.0698 -0.3985 0.5122 0.1330 -0.4629 0.6658 -0.5585 0.0767 0.5327 'X-RAY DIFFRACTION' 8 ? refined -16.7617 -14.3649 -14.3377 0.1685 0.1496 0.2403 0.0243 -0.1023 -0.0284 29.7204 0.7410 10.3061 -1.2211 15.6968 0.5345 0.7808 -0.9731 0.1844 0.1544 -0.0871 -0.4028 0.8041 -0.5239 -0.6937 'X-RAY DIFFRACTION' 9 ? refined -9.6049 -9.4765 -10.3312 0.1418 0.0890 0.1040 -0.0095 -0.0279 0.0281 2.1692 3.3099 1.4868 0.9380 1.5138 1.7713 0.1846 0.1235 0.0388 0.3266 -0.1151 -0.2357 0.2126 0.0215 -0.0696 'X-RAY DIFFRACTION' 10 ? refined -22.7717 -9.5814 -16.6970 0.0710 0.1197 0.0827 0.0531 -0.0461 0.0142 13.9166 13.8119 5.5635 -0.7882 7.8032 -4.4861 -0.0583 -0.3479 -0.7082 0.3366 0.4787 -0.1301 -0.0912 -0.3539 -0.4204 'X-RAY DIFFRACTION' 11 ? refined -23.6903 0.4753 -24.4728 0.0669 0.1128 0.1069 0.0697 0.0192 0.0517 5.0017 1.2616 8.3189 0.9148 -0.8511 -1.7273 0.0769 -0.1926 -0.2785 -0.1000 -0.1570 -0.1573 -0.0664 -0.3795 0.0801 'X-RAY DIFFRACTION' 12 ? refined -20.9876 2.7836 -27.0547 0.1807 0.1529 0.0332 -0.0279 0.0196 -0.0167 2.9154 0.0934 2.8465 0.3527 2.7352 0.4492 -0.2252 -0.1611 0.0992 -0.1029 0.0601 0.0040 -0.4317 -0.1922 0.1651 'X-RAY DIFFRACTION' 13 ? refined -17.7952 -4.9116 -12.5862 0.0361 0.1332 0.0729 0.0397 0.0238 0.0113 2.7400 11.8956 6.7824 1.1872 -4.3078 -2.1907 -0.1911 -0.3864 -0.1849 0.3579 -0.1153 0.2859 0.3272 0.6114 0.3064 'X-RAY DIFFRACTION' 14 ? refined -13.4736 2.0391 -13.7681 0.1669 0.1092 0.0396 -0.0169 0.0552 -0.0042 9.9800 3.2281 2.7204 1.1320 -4.1118 -2.2489 0.2929 -0.2345 0.0328 0.5397 -0.0659 0.2714 -0.4391 0.0787 -0.2270 'X-RAY DIFFRACTION' 15 ? refined -12.0129 -1.4003 -26.0657 0.2440 0.0968 0.2803 -0.0298 0.1189 0.0517 3.3749 1.1470 0.5824 1.9594 -1.3282 -0.7948 -0.0147 0.1929 -0.3000 0.0629 0.0621 -0.1294 -0.1188 -0.0882 -0.0474 'X-RAY DIFFRACTION' 16 ? refined -6.9926 5.8474 -30.1635 0.1667 0.1561 0.1141 -0.0355 0.0391 -0.0160 11.2431 1.4045 1.3773 1.4867 1.7634 0.9402 -0.5461 0.3341 0.0391 -0.3976 0.2418 0.0320 -0.1475 0.1122 0.3043 'X-RAY DIFFRACTION' 17 ? refined -4.3294 2.0040 -32.8677 0.1882 0.1553 0.0484 0.1128 0.0053 -0.0212 10.6188 11.5365 5.0724 10.8158 -5.6766 -6.7157 -0.2906 0.2888 -0.0513 -0.3823 0.2084 -0.0736 0.0506 -0.1551 0.0822 'X-RAY DIFFRACTION' 18 ? refined 0.4967 -3.9126 -26.4144 0.0930 0.0655 0.0548 -0.0292 -0.0236 0.0223 18.3934 9.4061 6.5001 6.5023 10.7201 5.1283 0.3651 0.2433 -0.7114 0.6007 0.0433 0.0108 0.3247 0.1393 -0.4084 'X-RAY DIFFRACTION' 19 ? refined 15.8131 -0.6094 -20.9289 0.1366 0.4131 0.2900 0.0992 -0.0487 -0.1187 6.0189 7.9142 0.4794 -6.7864 1.3820 -1.3532 0.2301 0.3919 0.1689 -0.1436 -0.1312 -0.3635 0.1224 0.3228 -0.0989 'X-RAY DIFFRACTION' 20 ? refined 6.4095 -3.0187 -23.5308 0.2088 0.3842 0.2464 0.0185 0.0210 -0.1287 3.5228 0.1154 5.9954 0.5769 4.4801 0.6572 0.3920 0.3814 -0.5037 0.0333 0.1143 -0.1285 0.5984 0.1937 -0.5062 'X-RAY DIFFRACTION' 21 ? refined -1.9780 4.8880 -15.8804 0.0714 0.0872 0.1040 0.0211 0.0099 -0.0101 15.8720 3.3100 18.0036 -2.2533 12.5039 -3.4934 0.1632 -0.6348 -0.1437 0.0094 -0.0684 0.1305 -0.0538 -0.3252 -0.0948 'X-RAY DIFFRACTION' 22 ? refined 7.0618 -1.9156 -13.7593 0.0244 0.0535 0.1356 -0.0219 0.0400 0.0026 7.9909 20.4427 13.2915 -5.6465 9.6800 -1.7656 0.1199 0.0046 0.2658 -0.2179 -0.3519 -0.5076 0.0996 -0.1045 0.2319 'X-RAY DIFFRACTION' 23 ? refined 17.8763 -0.9455 -10.4472 0.1982 0.3199 0.1699 0.0182 -0.0214 0.0271 10.8024 11.4594 13.2193 9.7272 5.6236 10.3355 -0.3459 0.1839 -0.7978 -0.6376 0.8110 -0.7541 -0.7762 1.2999 -0.4651 'X-RAY DIFFRACTION' 24 ? refined 8.7698 2.0662 -2.6309 0.1127 0.0630 0.0644 0.0017 0.0173 0.0202 14.3791 2.6534 13.3289 -2.1904 4.9353 -3.2908 -0.3158 -0.7862 -0.0319 0.1849 -0.0421 -0.3345 -0.0190 0.1563 0.3580 'X-RAY DIFFRACTION' 25 ? refined -4.2834 -2.7856 -5.9289 0.1609 0.1087 0.0774 -0.0171 0.0213 -0.0316 16.3836 4.1425 5.5166 5.8902 3.5533 -1.8221 0.2937 0.1774 0.5988 -0.2911 -0.2199 0.3341 0.7010 0.4226 -0.0738 'X-RAY DIFFRACTION' 26 ? refined 10.7251 0.4540 -6.3141 0.4532 0.2599 0.1209 0.1327 -0.0934 -0.0523 6.5163 3.6279 14.9795 4.8584 -9.7622 -7.2769 0.1520 0.0062 -0.0370 0.1736 -0.0634 -0.0312 0.0488 0.2313 -0.0886 'X-RAY DIFFRACTION' 27 ? refined 14.5064 7.8116 -14.7331 0.0629 0.1322 0.2027 -0.0085 -0.0194 0.0892 9.0961 4.8958 4.8795 -2.5672 3.6415 -4.7831 0.1579 -0.2363 -0.2473 0.0703 -0.0527 -0.1032 -0.0199 -0.1166 -0.1052 'X-RAY DIFFRACTION' 28 ? refined 10.8314 6.0191 -26.7173 0.1006 0.0363 0.4919 0.0076 0.1344 0.0215 7.7692 8.4958 12.0887 6.9515 0.4503 5.5540 -0.2677 0.4056 -0.5755 -0.3107 0.5185 -0.8181 0.0579 0.2993 -0.2508 'X-RAY DIFFRACTION' 29 ? refined 8.5367 2.0019 -12.4031 0.1206 0.1375 0.0879 -0.0540 -0.0544 0.0232 0.8313 0.3828 0.8307 -0.5428 -0.6666 0.5268 0.0115 -0.0971 -0.0980 0.0338 0.0060 0.0367 0.1338 -0.0827 -0.0175 'X-RAY DIFFRACTION' 30 ? refined 2.4829 -2.4355 -17.1997 0.0838 0.1992 0.0913 -0.0473 0.0004 -0.0482 2.6617 15.6404 0.7605 -3.5122 -0.6917 -1.6103 -0.2080 0.1471 -0.1740 0.3536 0.1651 0.3126 0.0442 -0.1384 0.0429 'X-RAY DIFFRACTION' 31 ? refined 3.2064 10.3367 -19.8632 0.1177 0.1201 0.0543 0.0050 -0.0073 -0.0102 6.7240 2.6666 0.2714 -1.0896 1.3462 -0.1553 0.1428 0.1162 0.1372 0.0926 -0.2202 -0.0361 0.0246 0.0181 0.0774 'X-RAY DIFFRACTION' 32 ? refined -7.4853 10.5272 -27.8888 0.1300 0.1239 0.1179 -0.0295 0.0332 0.0168 12.7004 3.8861 10.2378 6.1668 9.7529 4.3483 0.1236 -0.5459 0.6583 -0.1511 -0.2543 0.2931 -0.0521 -0.3957 0.1306 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 A 1 ? ? A 6 ? ? ? ? 'X-RAY DIFFRACTION' 2 2 A 7 ? ? A 12 ? ? ? ? 'X-RAY DIFFRACTION' 3 3 A 13 ? ? A 18 ? ? ? ? 'X-RAY DIFFRACTION' 4 4 A 19 ? ? A 24 ? ? ? ? 'X-RAY DIFFRACTION' 5 5 A 25 ? ? A 30 ? ? ? ? 'X-RAY DIFFRACTION' 6 6 A 31 ? ? A 36 ? ? ? ? 'X-RAY DIFFRACTION' 7 7 A 37 ? ? A 42 ? ? ? ? 'X-RAY DIFFRACTION' 8 8 A 43 ? ? A 46 ? ? ? ? 'X-RAY DIFFRACTION' 9 9 A 47 ? ? A 56 ? ? ? ? 'X-RAY DIFFRACTION' 10 10 A 57 ? ? A 60 ? ? ? ? 'X-RAY DIFFRACTION' 11 11 A 61 ? ? A 66 ? ? ? ? 'X-RAY DIFFRACTION' 12 12 A 67 ? ? A 74 ? ? ? ? 'X-RAY DIFFRACTION' 13 13 A 75 ? ? A 80 ? ? ? ? 'X-RAY DIFFRACTION' 14 14 A 81 ? ? A 85 ? ? ? ? 'X-RAY DIFFRACTION' 15 15 A 86 ? ? A 91 ? ? ? ? 'X-RAY DIFFRACTION' 16 16 A 92 ? ? A 99 ? ? ? ? 'X-RAY DIFFRACTION' 17 17 B 1 ? ? B 6 ? ? ? ? 'X-RAY DIFFRACTION' 18 18 B 7 ? ? B 12 ? ? ? ? 'X-RAY DIFFRACTION' 19 19 B 13 ? ? B 18 ? ? ? ? 'X-RAY DIFFRACTION' 20 20 B 19 ? ? B 24 ? ? ? ? 'X-RAY DIFFRACTION' 21 21 B 25 ? ? B 30 ? ? ? ? 'X-RAY DIFFRACTION' 22 22 B 31 ? ? B 35 ? ? ? ? 'X-RAY DIFFRACTION' 23 23 B 36 ? ? B 41 ? ? ? ? 'X-RAY DIFFRACTION' 24 24 B 42 ? ? B 47 ? ? ? ? 'X-RAY DIFFRACTION' 25 25 B 48 ? ? B 54 ? ? ? ? 'X-RAY DIFFRACTION' 26 26 B 55 ? ? B 59 ? ? ? ? 'X-RAY DIFFRACTION' 27 27 B 60 ? ? B 64 ? ? ? ? 'X-RAY DIFFRACTION' 28 28 B 65 ? ? B 70 ? ? ? ? 'X-RAY DIFFRACTION' 29 29 B 71 ? ? B 80 ? ? ? ? 'X-RAY DIFFRACTION' 30 30 B 81 ? ? B 86 ? ? ? ? 'X-RAY DIFFRACTION' 31 31 B 87 ? ? B 94 ? ? ? ? 'X-RAY DIFFRACTION' 32 32 B 95 ? ? B 99 ? ? ? ? # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 DENZO . ? package 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data reduction' http://www.hkl-xray.com/ ? ? 2 SCALEPACK . ? package 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data scaling' http://www.hkl-xray.com/ ? ? 3 REFMAC . ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 4 PDB_EXTRACT 3.10 'June 10, 2010' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLU A 35 ? ? -47.65 106.55 2 1 CYS B 16 ? ? 39.69 44.31 3 1 GLN B 61 ? ? 31.01 56.90 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 7 ? CG ? A LYS 7 CG 2 1 Y 1 A LYS 7 ? CD ? A LYS 7 CD 3 1 Y 1 A LYS 7 ? CE ? A LYS 7 CE 4 1 Y 1 A LYS 7 ? NZ ? A LYS 7 NZ 5 1 Y 1 A GLU 34 ? CG ? A GLU 34 CG 6 1 Y 1 A GLU 34 ? CD ? A GLU 34 CD 7 1 Y 1 A GLU 34 ? OE1 ? A GLU 34 OE1 8 1 Y 1 A GLU 34 ? OE2 ? A GLU 34 OE2 9 1 Y 1 A GLU 35 ? CG ? A GLU 35 CG 10 1 Y 1 A GLU 35 ? CD ? A GLU 35 CD 11 1 Y 1 A GLU 35 ? OE1 ? A GLU 35 OE1 12 1 Y 1 A GLU 35 ? OE2 ? A GLU 35 OE2 13 1 Y 1 A LYS 41 ? CG ? A LYS 41 CG 14 1 Y 1 A LYS 41 ? CD ? A LYS 41 CD 15 1 Y 1 A LYS 41 ? CE ? A LYS 41 CE 16 1 Y 1 A LYS 41 ? NZ ? A LYS 41 NZ 17 1 Y 1 A LYS 43 ? CG ? A LYS 43 CG 18 1 Y 1 A LYS 43 ? CD ? A LYS 43 CD 19 1 Y 1 A LYS 43 ? CE ? A LYS 43 CE 20 1 Y 1 A LYS 43 ? NZ ? A LYS 43 NZ 21 1 Y 1 A LYS 70 ? CG ? A LYS 70 CG 22 1 Y 1 A LYS 70 ? CD ? A LYS 70 CD 23 1 Y 1 A LYS 70 ? CE ? A LYS 70 CE 24 1 Y 1 A LYS 70 ? NZ ? A LYS 70 NZ 25 1 Y 1 B LYS 7 ? CG ? B LYS 7 CG 26 1 Y 1 B LYS 7 ? CD ? B LYS 7 CD 27 1 Y 1 B LYS 7 ? CE ? B LYS 7 CE 28 1 Y 1 B LYS 7 ? NZ ? B LYS 7 NZ 29 1 Y 1 B GLN 18 ? CG ? B GLN 18 CG 30 1 Y 1 B GLN 18 ? CD ? B GLN 18 CD 31 1 Y 1 B GLN 18 ? OE1 ? B GLN 18 OE1 32 1 Y 1 B GLN 18 ? NE2 ? B GLN 18 NE2 33 1 Y 1 B LYS 20 ? CG ? B LYS 20 CG 34 1 Y 1 B LYS 20 ? CD ? B LYS 20 CD 35 1 Y 1 B LYS 20 ? CE ? B LYS 20 CE 36 1 Y 1 B LYS 20 ? NZ ? B LYS 20 NZ 37 1 Y 1 B GLU 34 ? CG ? B GLU 34 CG 38 1 Y 1 B GLU 34 ? CD ? B GLU 34 CD 39 1 Y 1 B GLU 34 ? OE1 ? B GLU 34 OE1 40 1 Y 1 B GLU 34 ? OE2 ? B GLU 34 OE2 41 1 Y 1 B GLU 35 ? CG ? B GLU 35 CG 42 1 Y 1 B GLU 35 ? CD ? B GLU 35 CD 43 1 Y 1 B GLU 35 ? OE1 ? B GLU 35 OE1 44 1 Y 1 B GLU 35 ? OE2 ? B GLU 35 OE2 45 1 Y 1 B LYS 41 ? CG ? B LYS 41 CG 46 1 Y 1 B LYS 41 ? CD ? B LYS 41 CD 47 1 Y 1 B LYS 41 ? CE ? B LYS 41 CE 48 1 Y 1 B LYS 41 ? NZ ? B LYS 41 NZ 49 1 Y 1 B LYS 45 ? CG ? B LYS 45 CG 50 1 Y 1 B LYS 45 ? CD ? B LYS 45 CD 51 1 Y 1 B LYS 45 ? CE ? B LYS 45 CE 52 1 Y 1 B LYS 45 ? NZ ? B LYS 45 NZ 53 1 Y 1 B LYS 55 ? CG ? B LYS 55 CG 54 1 Y 1 B LYS 55 ? CD ? B LYS 55 CD 55 1 Y 1 B LYS 55 ? CE ? B LYS 55 CE 56 1 Y 1 B LYS 55 ? NZ ? B LYS 55 NZ 57 1 Y 1 B LYS 70 ? CG ? B LYS 70 CG 58 1 Y 1 B LYS 70 ? CD ? B LYS 70 CD 59 1 Y 1 B LYS 70 ? CE ? B LYS 70 CE 60 1 Y 1 B LYS 70 ? NZ ? B LYS 70 NZ # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 N-HYDROXYGUANIDINE HGU 3 GLYCEROL GOL 4 'OXYGEN MOLECULE' OXY 5 'ACETATE ION' ACT 6 'PHOSPHATE ION' PO4 7 water HOH #