HEADER DNA BINDING PROTEIN 17-FEB-12 4DRA TITLE CRYSTAL STRUCTURE OF MHF COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: CENTROMERE PROTEIN S; COMPND 3 CHAIN: A, B, C, D; COMPND 4 FRAGMENT: C-TERMINUS DELETED, UNP RESIDUES 1-107; COMPND 5 SYNONYM: CENP-S, APOPTOSIS-INDUCING TAF9-LIKE DOMAIN-CONTAINING COMPND 6 PROTEIN 1, FANCM-INTERACTING HISTONE FOLD PROTEIN 1, FANCONI ANEMIA- COMPND 7 ASSOCIATED POLYPEPTIDE OF 16 KDA; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 2; COMPND 10 MOLECULE: CENTROMERE PROTEIN X; COMPND 11 CHAIN: E, F, G, H; COMPND 12 SYNONYM: CENP-X, FANCM-INTERACTING HISTONE FOLD PROTEIN 2, FANCONI COMPND 13 ANEMIA-ASSOCIATED POLYPEPTIDE OF 10 KDA, RETINOIC ACID-INDUCIBLE GENE COMPND 14 D9 PROTEIN HOMOLOG, STIMULATED BY RETINOIC ACID GENE 13 PROTEIN COMPND 15 HOMOLOG; COMPND 16 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: APITD1, CENPS, FAAP16, MHF1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 10 ORGANISM_COMMON: HUMAN; SOURCE 11 ORGANISM_TAXID: 9606; SOURCE 12 GENE: STRA13, CENPX, FAAP10, MHF2; SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS DNA BINDING COMPLEX, DNA DAMAGE REPAIR, HISTONE-FOLD, DNA BINDING KEYWDS 2 PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR Y.TAO,L.NIU,M.TENG REVDAT 2 20-MAR-24 4DRA 1 SEQADV REVDAT 1 16-MAY-12 4DRA 0 JRNL AUTH Y.TAO,C.JIN,X.LI,S.QI,L.CHU,L.NIU,X.YAO,M.TENG JRNL TITL THE STRUCTURE OF THE FANCM-MHF COMPLEX REVEALS PHYSICAL JRNL TITL 2 FEATURES FOR FUNCTIONAL ASSEMBLY JRNL REF NAT COMMUN V. 3 782 2012 JRNL REFN ESSN 2041-1723 JRNL PMID 22510687 JRNL DOI 10.1038/NCOMMS1779 REMARK 2 REMARK 2 RESOLUTION. 2.41 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.6_289) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.41 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 34.15 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.100 REMARK 3 COMPLETENESS FOR RANGE (%) : 90.3 REMARK 3 NUMBER OF REFLECTIONS : 31356 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.193 REMARK 3 R VALUE (WORKING SET) : 0.190 REMARK 3 FREE R VALUE : 0.242 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.080 REMARK 3 FREE R VALUE TEST SET COUNT : 1592 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 34.1566 - 5.1944 0.99 3303 193 0.1708 0.1992 REMARK 3 2 5.1944 - 4.1252 0.99 3280 178 0.1567 0.2026 REMARK 3 3 4.1252 - 3.6044 0.99 3321 160 0.1767 0.2159 REMARK 3 4 3.6044 - 3.2751 0.97 3210 168 0.1895 0.2666 REMARK 3 5 3.2751 - 3.0405 0.93 3065 161 0.2075 0.2431 REMARK 3 6 3.0405 - 2.8614 0.89 2888 171 0.2157 0.2831 REMARK 3 7 2.8614 - 2.7181 0.87 2865 135 0.2140 0.2580 REMARK 3 8 2.7181 - 2.5999 0.84 2765 151 0.2164 0.2928 REMARK 3 9 2.5999 - 2.4998 0.81 2660 150 0.2232 0.3356 REMARK 3 10 2.4998 - 2.4136 0.74 2407 125 0.2372 0.3098 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : 0.35 REMARK 3 B_SOL : 43.42 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.340 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 25.180 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 44.71 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -2.19870 REMARK 3 B22 (A**2) : 3.68980 REMARK 3 B33 (A**2) : -1.49100 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 6.31560 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 5335 REMARK 3 ANGLE : 0.557 7203 REMARK 3 CHIRALITY : 0.038 868 REMARK 3 PLANARITY : 0.001 924 REMARK 3 DIHEDRAL : 18.723 1932 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'D' REMARK 3 ORIGIN FOR THE GROUP (A): 7.1710 -16.3106 49.5468 REMARK 3 T TENSOR REMARK 3 T11: 0.3429 T22: 0.1791 REMARK 3 T33: 0.1798 T12: 0.0068 REMARK 3 T13: 0.0562 T23: -0.0338 REMARK 3 L TENSOR REMARK 3 L11: 1.1253 L22: 0.4701 REMARK 3 L33: 2.0141 L12: -0.0583 REMARK 3 L13: -1.0572 L23: -0.4962 REMARK 3 S TENSOR REMARK 3 S11: -0.3607 S12: -0.0615 S13: -0.0992 REMARK 3 S21: 0.1223 S22: -0.0181 S23: -0.0397 REMARK 3 S31: 0.4204 S32: -0.1619 S33: -0.0002 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'C' REMARK 3 ORIGIN FOR THE GROUP (A): -12.5800 -27.3290 -9.1951 REMARK 3 T TENSOR REMARK 3 T11: 0.2182 T22: 0.1591 REMARK 3 T33: 0.1462 T12: 0.0453 REMARK 3 T13: 0.0272 T23: 0.0049 REMARK 3 L TENSOR REMARK 3 L11: 0.5872 L22: 1.1739 REMARK 3 L33: 1.1053 L12: 0.4518 REMARK 3 L13: 0.1848 L23: 0.3561 REMARK 3 S TENSOR REMARK 3 S11: 0.0188 S12: 0.1341 S13: -0.0702 REMARK 3 S21: -0.0692 S22: -0.0944 S23: -0.0271 REMARK 3 S31: -0.0041 S32: 0.0361 S33: -0.0000 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'B' REMARK 3 ORIGIN FOR THE GROUP (A): -8.1420 -35.9224 17.6915 REMARK 3 T TENSOR REMARK 3 T11: 0.0407 T22: 0.1188 REMARK 3 T33: 0.1112 T12: 0.0025 REMARK 3 T13: -0.0118 T23: 0.0266 REMARK 3 L TENSOR REMARK 3 L11: 1.5359 L22: 1.3246 REMARK 3 L33: 1.2759 L12: 0.3052 REMARK 3 L13: 0.5856 L23: -0.5230 REMARK 3 S TENSOR REMARK 3 S11: 0.0204 S12: -0.0855 S13: -0.1568 REMARK 3 S21: 0.0529 S22: 0.0443 S23: -0.1231 REMARK 3 S31: -0.0993 S32: -0.1024 S33: -0.0000 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' REMARK 3 ORIGIN FOR THE GROUP (A): 10.2614 0.2498 26.5708 REMARK 3 T TENSOR REMARK 3 T11: 0.0496 T22: 0.1307 REMARK 3 T33: 0.1229 T12: -0.0052 REMARK 3 T13: -0.0249 T23: 0.0275 REMARK 3 L TENSOR REMARK 3 L11: 1.1028 L22: 1.1252 REMARK 3 L33: 0.7662 L12: -0.5519 REMARK 3 L13: -0.3863 L23: 0.1638 REMARK 3 S TENSOR REMARK 3 S11: 0.0129 S12: 0.1784 S13: 0.0811 REMARK 3 S21: -0.0470 S22: -0.0004 S23: 0.0755 REMARK 3 S31: 0.0652 S32: -0.1058 S33: 0.0000 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4DRA COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 23-FEB-12. REMARK 100 THE DEPOSITION ID IS D_1000070684. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-NOV-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL17U REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9794 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 32631 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.410 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 94.1 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.41 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.45 REMARK 200 COMPLETENESS FOR SHELL (%) : 86.4 REMARK 200 DATA REDUNDANCY IN SHELL : 3.10 REMARK 200 R MERGE FOR SHELL (I) : 0.47200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.530 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.71 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.55 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M HEPES-NAOH, PH 6.8, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 285K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 64.38550 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 10400 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 16200 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -103.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, D, E, H REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 10390 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 17200 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -104.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, C, F, G REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 HIS A -5 REMARK 465 HIS A -4 REMARK 465 HIS A -3 REMARK 465 HIS A -2 REMARK 465 HIS A -1 REMARK 465 HIS A 0 REMARK 465 MET A 1 REMARK 465 GLU A 2 REMARK 465 GLU A 3 REMARK 465 GLU A 4 REMARK 465 ALA A 5 REMARK 465 GLU A 6 REMARK 465 THR A 7 REMARK 465 GLU A 8 REMARK 465 GLU A 9 REMARK 465 GLN A 10 REMARK 465 GLN A 11 REMARK 465 ARG A 12 REMARK 465 ILE A 106 REMARK 465 ASN A 107 REMARK 465 HIS B -5 REMARK 465 HIS B -4 REMARK 465 HIS B -3 REMARK 465 HIS B -2 REMARK 465 HIS B -1 REMARK 465 HIS B 0 REMARK 465 MET B 1 REMARK 465 GLU B 2 REMARK 465 GLU B 3 REMARK 465 GLU B 4 REMARK 465 ALA B 5 REMARK 465 GLU B 6 REMARK 465 THR B 7 REMARK 465 GLU B 8 REMARK 465 GLU B 9 REMARK 465 GLN B 10 REMARK 465 GLN B 11 REMARK 465 ARG B 12 REMARK 465 HIS C -5 REMARK 465 HIS C -4 REMARK 465 HIS C -3 REMARK 465 HIS C -2 REMARK 465 HIS C -1 REMARK 465 HIS C 0 REMARK 465 MET C 1 REMARK 465 GLU C 2 REMARK 465 GLU C 3 REMARK 465 GLU C 4 REMARK 465 ALA C 5 REMARK 465 GLU C 6 REMARK 465 GLN C 105 REMARK 465 ILE C 106 REMARK 465 ASN C 107 REMARK 465 HIS D -5 REMARK 465 HIS D -4 REMARK 465 HIS D -3 REMARK 465 HIS D -2 REMARK 465 HIS D -1 REMARK 465 HIS D 0 REMARK 465 MET D 1 REMARK 465 GLU D 2 REMARK 465 GLU D 3 REMARK 465 GLU D 4 REMARK 465 ALA D 5 REMARK 465 GLU D 6 REMARK 465 THR D 7 REMARK 465 GLU D 8 REMARK 465 GLU D 9 REMARK 465 GLN D 10 REMARK 465 ALA D 104 REMARK 465 GLN D 105 REMARK 465 ILE D 106 REMARK 465 ASN D 107 REMARK 465 GLY E -2 REMARK 465 SER E -1 REMARK 465 HIS E 0 REMARK 465 MET E 1 REMARK 465 GLU E 2 REMARK 465 GLY E 3 REMARK 465 ALA E 4 REMARK 465 GLY E 5 REMARK 465 ALA E 6 REMARK 465 GLY E 7 REMARK 465 GLY F -2 REMARK 465 SER F -1 REMARK 465 HIS F 0 REMARK 465 MET F 1 REMARK 465 GLU F 2 REMARK 465 GLY F 3 REMARK 465 ALA F 4 REMARK 465 GLY F 5 REMARK 465 ALA F 6 REMARK 465 GLY F 7 REMARK 465 GLY G -2 REMARK 465 SER G -1 REMARK 465 HIS G 0 REMARK 465 MET G 1 REMARK 465 GLU G 2 REMARK 465 GLY G 3 REMARK 465 ALA G 4 REMARK 465 GLY G 5 REMARK 465 ALA G 6 REMARK 465 GLY G 7 REMARK 465 GLY H -2 REMARK 465 SER H -1 REMARK 465 HIS H 0 REMARK 465 MET H 1 REMARK 465 GLU H 2 REMARK 465 GLY H 3 REMARK 465 ALA H 4 REMARK 465 GLY H 5 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 33 CG CD OE1 OE2 REMARK 470 LYS A 44 CD CE NZ REMARK 470 GLU A 101 CG CD OE1 OE2 REMARK 470 GLN A 105 CG CD OE1 NE2 REMARK 470 GLU B 32 CG CD OE1 OE2 REMARK 470 GLU B 39 CG CD OE1 OE2 REMARK 470 ARG B 70 CZ NH1 NH2 REMARK 470 GLN B 105 CD OE1 NE2 REMARK 470 THR C 7 OG1 CG2 REMARK 470 GLU C 8 CG CD OE1 OE2 REMARK 470 GLU C 9 CG CD OE1 OE2 REMARK 470 GLN C 10 CG CD OE1 NE2 REMARK 470 GLN C 11 CG CD OE1 NE2 REMARK 470 ARG C 12 CG CD NE CZ NH1 NH2 REMARK 470 GLN C 16 CG CD OE1 NE2 REMARK 470 GLU C 32 CG CD OE1 OE2 REMARK 470 LYS C 44 CG CD CE NZ REMARK 470 GLU C 52 CG CD OE1 OE2 REMARK 470 ARG C 56 CZ NH1 NH2 REMARK 470 ARG C 70 NE CZ NH1 NH2 REMARK 470 LYS C 94 CG CD CE NZ REMARK 470 LYS C 99 CG CD CE NZ REMARK 470 GLU C 101 CG CD OE1 OE2 REMARK 470 GLU C 102 CG CD OE1 OE2 REMARK 470 GLN D 11 CG CD OE1 NE2 REMARK 470 ARG D 12 CG CD NE CZ NH1 NH2 REMARK 470 PHE D 13 CG CD1 CD2 CE1 CE2 CZ REMARK 470 GLN D 16 CG CD OE1 NE2 REMARK 470 GLN D 17 CG CD OE1 NE2 REMARK 470 ARG D 18 CG CD NE CZ NH1 NH2 REMARK 470 LYS D 20 CG CD CE NZ REMARK 470 GLN D 41 CG CD OE1 NE2 REMARK 470 LYS D 44 CD CE NZ REMARK 470 ARG D 56 CG CD NE CZ NH1 NH2 REMARK 470 ARG D 70 CG CD NE CZ NH1 NH2 REMARK 470 LYS D 73 CG CD CE NZ REMARK 470 LYS D 94 CG CD CE NZ REMARK 470 LYS D 99 CG CD CE NZ REMARK 470 GLU D 101 CG CD OE1 OE2 REMARK 470 GLU D 102 CG CD OE1 OE2 REMARK 470 LYS E 24 CE NZ REMARK 470 ASP E 26 CG OD1 OD2 REMARK 470 LYS E 27 CG CD CE NZ REMARK 470 LYS E 29 CE NZ REMARK 470 ARG E 55 CG CD NE CZ NH1 NH2 REMARK 470 LYS F 24 CG CD CE NZ REMARK 470 LYS F 29 CE NZ REMARK 470 LYS G 24 CG CD CE NZ REMARK 470 ASP G 26 CG OD1 OD2 REMARK 470 LYS G 29 CG CD CE NZ REMARK 470 LEU G 63 CG CD1 CD2 REMARK 470 LYS H 12 CG CD CE NZ REMARK 470 LYS H 27 CG CD CE NZ REMARK 470 LYS H 29 CG CD CE NZ REMARK 470 GLN H 36 CG CD OE1 NE2 REMARK 470 LEU H 63 CG CD1 CD2 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 GLN A 17 CD REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 14 -166.46 -74.27 REMARK 500 ASN A 78 -168.27 -115.42 REMARK 500 ASN C 78 -167.83 -120.30 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4DRB RELATED DB: PDB DBREF 4DRA A 1 107 UNP Q8N2Z9 CENPS_HUMAN 1 107 DBREF 4DRA B 1 107 UNP Q8N2Z9 CENPS_HUMAN 1 107 DBREF 4DRA C 1 107 UNP Q8N2Z9 CENPS_HUMAN 1 107 DBREF 4DRA D 1 107 UNP Q8N2Z9 CENPS_HUMAN 1 107 DBREF 4DRA E 1 81 UNP A8MT69 CENPX_HUMAN 1 81 DBREF 4DRA F 1 81 UNP A8MT69 CENPX_HUMAN 1 81 DBREF 4DRA G 1 81 UNP A8MT69 CENPX_HUMAN 1 81 DBREF 4DRA H 1 81 UNP A8MT69 CENPX_HUMAN 1 81 SEQADV 4DRA HIS A -5 UNP Q8N2Z9 EXPRESSION TAG SEQADV 4DRA HIS A -4 UNP Q8N2Z9 EXPRESSION TAG SEQADV 4DRA HIS A -3 UNP Q8N2Z9 EXPRESSION TAG SEQADV 4DRA HIS A -2 UNP Q8N2Z9 EXPRESSION TAG SEQADV 4DRA HIS A -1 UNP Q8N2Z9 EXPRESSION TAG SEQADV 4DRA HIS A 0 UNP Q8N2Z9 EXPRESSION TAG SEQADV 4DRA HIS B -5 UNP Q8N2Z9 EXPRESSION TAG SEQADV 4DRA HIS B -4 UNP Q8N2Z9 EXPRESSION TAG SEQADV 4DRA HIS B -3 UNP Q8N2Z9 EXPRESSION TAG SEQADV 4DRA HIS B -2 UNP Q8N2Z9 EXPRESSION TAG SEQADV 4DRA HIS B -1 UNP Q8N2Z9 EXPRESSION TAG SEQADV 4DRA HIS B 0 UNP Q8N2Z9 EXPRESSION TAG SEQADV 4DRA HIS C -5 UNP Q8N2Z9 EXPRESSION TAG SEQADV 4DRA HIS C -4 UNP Q8N2Z9 EXPRESSION TAG SEQADV 4DRA HIS C -3 UNP Q8N2Z9 EXPRESSION TAG SEQADV 4DRA HIS C -2 UNP Q8N2Z9 EXPRESSION TAG SEQADV 4DRA HIS C -1 UNP Q8N2Z9 EXPRESSION TAG SEQADV 4DRA HIS C 0 UNP Q8N2Z9 EXPRESSION TAG SEQADV 4DRA HIS D -5 UNP Q8N2Z9 EXPRESSION TAG SEQADV 4DRA HIS D -4 UNP Q8N2Z9 EXPRESSION TAG SEQADV 4DRA HIS D -3 UNP Q8N2Z9 EXPRESSION TAG SEQADV 4DRA HIS D -2 UNP Q8N2Z9 EXPRESSION TAG SEQADV 4DRA HIS D -1 UNP Q8N2Z9 EXPRESSION TAG SEQADV 4DRA HIS D 0 UNP Q8N2Z9 EXPRESSION TAG SEQADV 4DRA GLY E -2 UNP A8MT69 EXPRESSION TAG SEQADV 4DRA SER E -1 UNP A8MT69 EXPRESSION TAG SEQADV 4DRA HIS E 0 UNP A8MT69 EXPRESSION TAG SEQADV 4DRA GLY F -2 UNP A8MT69 EXPRESSION TAG SEQADV 4DRA SER F -1 UNP A8MT69 EXPRESSION TAG SEQADV 4DRA HIS F 0 UNP A8MT69 EXPRESSION TAG SEQADV 4DRA GLY G -2 UNP A8MT69 EXPRESSION TAG SEQADV 4DRA SER G -1 UNP A8MT69 EXPRESSION TAG SEQADV 4DRA HIS G 0 UNP A8MT69 EXPRESSION TAG SEQADV 4DRA GLY H -2 UNP A8MT69 EXPRESSION TAG SEQADV 4DRA SER H -1 UNP A8MT69 EXPRESSION TAG SEQADV 4DRA HIS H 0 UNP A8MT69 EXPRESSION TAG SEQRES 1 A 113 HIS HIS HIS HIS HIS HIS MET GLU GLU GLU ALA GLU THR SEQRES 2 A 113 GLU GLU GLN GLN ARG PHE SER TYR GLN GLN ARG LEU LYS SEQRES 3 A 113 ALA ALA VAL HIS TYR THR VAL GLY CYS LEU CYS GLU GLU SEQRES 4 A 113 VAL ALA LEU ASP LYS GLU MET GLN PHE SER LYS GLN THR SEQRES 5 A 113 ILE ALA ALA ILE SER GLU LEU THR PHE ARG GLN CYS GLU SEQRES 6 A 113 ASN PHE ALA LYS ASP LEU GLU MET PHE ALA ARG HIS ALA SEQRES 7 A 113 LYS ARG THR THR ILE ASN THR GLU ASP VAL LYS LEU LEU SEQRES 8 A 113 ALA ARG ARG SER ASN SER LEU LEU LYS TYR ILE THR ASP SEQRES 9 A 113 LYS SER GLU GLU ILE ALA GLN ILE ASN SEQRES 1 B 113 HIS HIS HIS HIS HIS HIS MET GLU GLU GLU ALA GLU THR SEQRES 2 B 113 GLU GLU GLN GLN ARG PHE SER TYR GLN GLN ARG LEU LYS SEQRES 3 B 113 ALA ALA VAL HIS TYR THR VAL GLY CYS LEU CYS GLU GLU SEQRES 4 B 113 VAL ALA LEU ASP LYS GLU MET GLN PHE SER LYS GLN THR SEQRES 5 B 113 ILE ALA ALA ILE SER GLU LEU THR PHE ARG GLN CYS GLU SEQRES 6 B 113 ASN PHE ALA LYS ASP LEU GLU MET PHE ALA ARG HIS ALA SEQRES 7 B 113 LYS ARG THR THR ILE ASN THR GLU ASP VAL LYS LEU LEU SEQRES 8 B 113 ALA ARG ARG SER ASN SER LEU LEU LYS TYR ILE THR ASP SEQRES 9 B 113 LYS SER GLU GLU ILE ALA GLN ILE ASN SEQRES 1 C 113 HIS HIS HIS HIS HIS HIS MET GLU GLU GLU ALA GLU THR SEQRES 2 C 113 GLU GLU GLN GLN ARG PHE SER TYR GLN GLN ARG LEU LYS SEQRES 3 C 113 ALA ALA VAL HIS TYR THR VAL GLY CYS LEU CYS GLU GLU SEQRES 4 C 113 VAL ALA LEU ASP LYS GLU MET GLN PHE SER LYS GLN THR SEQRES 5 C 113 ILE ALA ALA ILE SER GLU LEU THR PHE ARG GLN CYS GLU SEQRES 6 C 113 ASN PHE ALA LYS ASP LEU GLU MET PHE ALA ARG HIS ALA SEQRES 7 C 113 LYS ARG THR THR ILE ASN THR GLU ASP VAL LYS LEU LEU SEQRES 8 C 113 ALA ARG ARG SER ASN SER LEU LEU LYS TYR ILE THR ASP SEQRES 9 C 113 LYS SER GLU GLU ILE ALA GLN ILE ASN SEQRES 1 D 113 HIS HIS HIS HIS HIS HIS MET GLU GLU GLU ALA GLU THR SEQRES 2 D 113 GLU GLU GLN GLN ARG PHE SER TYR GLN GLN ARG LEU LYS SEQRES 3 D 113 ALA ALA VAL HIS TYR THR VAL GLY CYS LEU CYS GLU GLU SEQRES 4 D 113 VAL ALA LEU ASP LYS GLU MET GLN PHE SER LYS GLN THR SEQRES 5 D 113 ILE ALA ALA ILE SER GLU LEU THR PHE ARG GLN CYS GLU SEQRES 6 D 113 ASN PHE ALA LYS ASP LEU GLU MET PHE ALA ARG HIS ALA SEQRES 7 D 113 LYS ARG THR THR ILE ASN THR GLU ASP VAL LYS LEU LEU SEQRES 8 D 113 ALA ARG ARG SER ASN SER LEU LEU LYS TYR ILE THR ASP SEQRES 9 D 113 LYS SER GLU GLU ILE ALA GLN ILE ASN SEQRES 1 E 84 GLY SER HIS MET GLU GLY ALA GLY ALA GLY SER GLY PHE SEQRES 2 E 84 ARG LYS GLU LEU VAL SER ARG LEU LEU HIS LEU HIS PHE SEQRES 3 E 84 LYS ASP ASP LYS THR LYS VAL SER GLY ASP ALA LEU GLN SEQRES 4 E 84 LEU MET VAL GLU LEU LEU LYS VAL PHE VAL VAL GLU ALA SEQRES 5 E 84 ALA VAL ARG GLY VAL ARG GLN ALA GLN ALA GLU ASP ALA SEQRES 6 E 84 LEU ARG VAL ASP VAL ASP GLN LEU GLU LYS VAL LEU PRO SEQRES 7 E 84 GLN LEU LEU LEU ASP PHE SEQRES 1 F 84 GLY SER HIS MET GLU GLY ALA GLY ALA GLY SER GLY PHE SEQRES 2 F 84 ARG LYS GLU LEU VAL SER ARG LEU LEU HIS LEU HIS PHE SEQRES 3 F 84 LYS ASP ASP LYS THR LYS VAL SER GLY ASP ALA LEU GLN SEQRES 4 F 84 LEU MET VAL GLU LEU LEU LYS VAL PHE VAL VAL GLU ALA SEQRES 5 F 84 ALA VAL ARG GLY VAL ARG GLN ALA GLN ALA GLU ASP ALA SEQRES 6 F 84 LEU ARG VAL ASP VAL ASP GLN LEU GLU LYS VAL LEU PRO SEQRES 7 F 84 GLN LEU LEU LEU ASP PHE SEQRES 1 G 84 GLY SER HIS MET GLU GLY ALA GLY ALA GLY SER GLY PHE SEQRES 2 G 84 ARG LYS GLU LEU VAL SER ARG LEU LEU HIS LEU HIS PHE SEQRES 3 G 84 LYS ASP ASP LYS THR LYS VAL SER GLY ASP ALA LEU GLN SEQRES 4 G 84 LEU MET VAL GLU LEU LEU LYS VAL PHE VAL VAL GLU ALA SEQRES 5 G 84 ALA VAL ARG GLY VAL ARG GLN ALA GLN ALA GLU ASP ALA SEQRES 6 G 84 LEU ARG VAL ASP VAL ASP GLN LEU GLU LYS VAL LEU PRO SEQRES 7 G 84 GLN LEU LEU LEU ASP PHE SEQRES 1 H 84 GLY SER HIS MET GLU GLY ALA GLY ALA GLY SER GLY PHE SEQRES 2 H 84 ARG LYS GLU LEU VAL SER ARG LEU LEU HIS LEU HIS PHE SEQRES 3 H 84 LYS ASP ASP LYS THR LYS VAL SER GLY ASP ALA LEU GLN SEQRES 4 H 84 LEU MET VAL GLU LEU LEU LYS VAL PHE VAL VAL GLU ALA SEQRES 5 H 84 ALA VAL ARG GLY VAL ARG GLN ALA GLN ALA GLU ASP ALA SEQRES 6 H 84 LEU ARG VAL ASP VAL ASP GLN LEU GLU LYS VAL LEU PRO SEQRES 7 H 84 GLN LEU LEU LEU ASP PHE FORMUL 9 HOH *116(H2 O) HELIX 1 1 SER A 14 GLU A 39 1 26 HELIX 2 2 SER A 43 ALA A 72 1 30 HELIX 3 3 ASN A 78 ALA A 86 1 9 HELIX 4 4 SER A 89 ALA A 104 1 16 HELIX 5 5 SER B 14 LYS B 38 1 25 HELIX 6 6 SER B 43 ALA B 72 1 30 HELIX 7 7 ASN B 78 ALA B 86 1 9 HELIX 8 8 SER B 89 ASN B 107 1 19 HELIX 9 9 GLU C 8 LYS C 38 1 31 HELIX 10 10 SER C 43 ALA C 72 1 30 HELIX 11 11 ASN C 78 ALA C 86 1 9 HELIX 12 12 SER C 89 ALA C 104 1 16 HELIX 13 13 ARG D 12 LYS D 38 1 27 HELIX 14 14 SER D 43 ALA D 72 1 30 HELIX 15 15 ASN D 78 LEU D 85 1 8 HELIX 16 16 SER D 89 GLU D 102 1 14 HELIX 17 17 ARG E 11 LEU E 21 1 11 HELIX 18 18 SER E 31 GLU E 60 1 30 HELIX 19 19 ASP E 66 PHE E 81 1 16 HELIX 20 20 ARG F 11 LEU F 21 1 11 HELIX 21 21 SER F 31 ASP F 61 1 31 HELIX 22 22 ASP F 66 PHE F 81 1 16 HELIX 23 23 ARG G 11 LEU G 21 1 11 HELIX 24 24 SER G 31 GLU G 60 1 30 HELIX 25 25 ASP G 66 PHE G 81 1 16 HELIX 26 26 ARG H 11 LEU H 21 1 11 HELIX 27 27 SER H 31 GLU H 60 1 30 HELIX 28 28 ASP H 66 PHE H 81 1 16 SHEET 1 A 2 THR A 76 ILE A 77 0 SHEET 2 A 2 LYS E 29 VAL E 30 1 O LYS E 29 N ILE A 77 SHEET 1 B 2 THR B 76 ILE B 77 0 SHEET 2 B 2 LYS F 29 VAL F 30 1 O LYS F 29 N ILE B 77 SHEET 1 C 2 THR C 76 ILE C 77 0 SHEET 2 C 2 LYS G 29 VAL G 30 1 O LYS G 29 N ILE C 77 SHEET 1 D 2 THR D 76 ILE D 77 0 SHEET 2 D 2 LYS H 29 VAL H 30 1 O LYS H 29 N ILE D 77 CRYST1 41.007 128.771 88.697 90.00 100.74 90.00 P 1 21 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.024386 0.000000 0.004626 0.00000 SCALE2 0.000000 0.007766 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011475 0.00000