HEADER ISOMERASE 17-FEB-12 4DRK TITLE EVALUATION OF SYNTHETIC FK506 ANALOGS AS LIGANDS FOR FKBP51 AND TITLE 2 FKBP52: COMPLEX OF FKBP51 WITH {3-[(1R)-3-(3,4-DIMETHOXYPHENYL)-1- TITLE 3 ({[(2S)-1-(3,3-DIMETHYL-2-OXOPENTANOYL)PIPERIDIN-2-YL]CARBONYL}OXY) TITLE 4 PROPYL]PHENOXY}ACETIC ACID COMPND MOL_ID: 1; COMPND 2 MOLECULE: PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP5; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 16-140; COMPND 5 SYNONYM: PPIASE FKBP5, 51 KDA FK506-BINDING PROTEIN, 51 KDA FKBP, COMPND 6 FKBP-51, 54 KDA PROGESTERONE RECEPTOR-ASSOCIATED IMMUNOPHILIN, COMPND 7 ANDROGEN-REGULATED PROTEIN 6, FF1 ANTIGEN, FK506-BINDING PROTEIN 5, COMPND 8 FKBP-5, FKBP54, P54, HSP90-BINDING IMMUNOPHILIN, ROTAMASE; COMPND 9 EC: 5.2.1.8; COMPND 10 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: AIG6, FKBP5, FKBP51; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) CODON+ RIL; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PPROEX-HTB KEYWDS FK-506 BINDING DOMAIN, HSP90 COCHAPERONE, IMMUNOPHILIN, PEPTIDYL- KEYWDS 2 PROLYL ISOMERASE, ISOMERASE EXPDTA X-RAY DIFFRACTION AUTHOR R.GOPALAKRISHNAN,C.KOZANY,S.GAALI,C.KRESS,B.HOOGELAND,A.BRACHER, AUTHOR 2 F.HAUSCH REVDAT 3 13-SEP-23 4DRK 1 REMARK SEQADV REVDAT 2 23-MAY-12 4DRK 1 JRNL REVDAT 1 16-MAY-12 4DRK 0 JRNL AUTH R.GOPALAKRISHNAN,C.KOZANY,S.GAALI,C.KRESS,B.HOOGELAND, JRNL AUTH 2 A.BRACHER,F.HAUSCH JRNL TITL EVALUATION OF SYNTHETIC FK506 ANALOGUES AS LIGANDS FOR THE JRNL TITL 2 FK506-BINDING PROTEINS 51 AND 52. JRNL REF J.MED.CHEM. V. 55 4114 2012 JRNL REFN ISSN 0022-2623 JRNL PMID 22455444 JRNL DOI 10.1021/JM201746X REMARK 2 REMARK 2 RESOLUTION. 1.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 37697 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.168 REMARK 3 R VALUE (WORKING SET) : 0.166 REMARK 3 FREE R VALUE : 0.200 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1995 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.50 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.54 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2674 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 97.93 REMARK 3 BIN R VALUE (WORKING SET) : 0.2000 REMARK 3 BIN FREE R VALUE SET COUNT : 163 REMARK 3 BIN FREE R VALUE : 0.2470 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1947 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 84 REMARK 3 SOLVENT ATOMS : 397 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 11.13 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 12.99 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.54000 REMARK 3 B22 (A**2) : 1.32000 REMARK 3 B33 (A**2) : -0.78000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.078 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.080 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.047 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.724 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.960 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.940 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2276 ; 0.014 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3083 ; 1.579 ; 2.020 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 295 ; 6.894 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 81 ;33.418 ;25.062 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 423 ;12.524 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 6 ;13.890 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 318 ; 0.110 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1724 ; 0.007 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1386 ; 0.881 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2247 ; 1.513 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 890 ; 2.262 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 836 ; 3.643 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 13 A 140 REMARK 3 ORIGIN FOR THE GROUP (A): 29.4373 -13.0157 27.4808 REMARK 3 T TENSOR REMARK 3 T11: 0.0079 T22: 0.0173 REMARK 3 T33: 0.0001 T12: -0.0010 REMARK 3 T13: -0.0010 T23: -0.0028 REMARK 3 L TENSOR REMARK 3 L11: 0.3467 L22: 0.3341 REMARK 3 L33: 0.4971 L12: -0.0605 REMARK 3 L13: 0.0427 L23: -0.1263 REMARK 3 S TENSOR REMARK 3 S11: -0.0035 S12: -0.0032 S13: -0.0018 REMARK 3 S21: -0.0172 S22: 0.0082 S23: 0.0069 REMARK 3 S31: -0.0013 S32: -0.0218 S33: -0.0047 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 13 B 139 REMARK 3 ORIGIN FOR THE GROUP (A): 30.5796 11.7873 41.0846 REMARK 3 T TENSOR REMARK 3 T11: 0.0031 T22: 0.0119 REMARK 3 T33: 0.0033 T12: -0.0021 REMARK 3 T13: 0.0010 T23: -0.0063 REMARK 3 L TENSOR REMARK 3 L11: 0.5621 L22: 0.4603 REMARK 3 L33: 0.4686 L12: 0.0456 REMARK 3 L13: -0.1689 L23: -0.0176 REMARK 3 S TENSOR REMARK 3 S11: -0.0041 S12: 0.0252 S13: -0.0023 REMARK 3 S21: 0.0176 S22: -0.0001 S23: 0.0230 REMARK 3 S31: 0.0149 S32: 0.0157 S33: 0.0043 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 201 A 201 REMARK 3 ORIGIN FOR THE GROUP (A): 19.0716 -14.4273 31.3982 REMARK 3 T TENSOR REMARK 3 T11: 0.0082 T22: 0.0515 REMARK 3 T33: 0.0085 T12: -0.0101 REMARK 3 T13: 0.0074 T23: -0.0073 REMARK 3 L TENSOR REMARK 3 L11: 0.2905 L22: 0.7827 REMARK 3 L33: 1.4498 L12: 0.3829 REMARK 3 L13: -0.4138 L23: -0.5692 REMARK 3 S TENSOR REMARK 3 S11: -0.0016 S12: 0.0793 S13: -0.0190 REMARK 3 S21: 0.0661 S22: -0.0211 S23: 0.0303 REMARK 3 S31: 0.0360 S32: -0.1770 S33: 0.0227 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 201 B 201 REMARK 3 ORIGIN FOR THE GROUP (A): 20.2537 13.2015 36.9929 REMARK 3 T TENSOR REMARK 3 T11: 0.0298 T22: 0.0265 REMARK 3 T33: 0.0157 T12: 0.0055 REMARK 3 T13: 0.0073 T23: -0.0003 REMARK 3 L TENSOR REMARK 3 L11: 3.2739 L22: 0.6630 REMARK 3 L33: 1.8393 L12: -0.3497 REMARK 3 L13: 1.1154 L23: -0.8929 REMARK 3 S TENSOR REMARK 3 S11: -0.0447 S12: -0.0073 S13: -0.0619 REMARK 3 S21: 0.1189 S22: 0.0887 S23: 0.0785 REMARK 3 S31: 0.0612 S32: -0.0322 S33: -0.0440 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : RESIDUAL ONLY REMARK 4 REMARK 4 4DRK COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 28-FEB-12. REMARK 100 THE DEPOSITION ID IS D_1000070693. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 09-AUG-05 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID23-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9757 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA 3.2.19 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 39769 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.500 REMARK 200 RESOLUTION RANGE LOW (A) : 46.438 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 6.500 REMARK 200 R MERGE (I) : 0.08500 REMARK 200 R SYM (I) : 0.08500 REMARK 200 FOR THE DATA SET : 14.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.58 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.7 REMARK 200 DATA REDUNDANCY IN SHELL : 6.20 REMARK 200 R MERGE FOR SHELL (I) : 0.38100 REMARK 200 R SYM FOR SHELL (I) : 0.38100 REMARK 200 FOR SHELL : 2.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 3O5Q REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.38 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.17 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 37.5 % PEG3350, 0.1 M NH4OAC, 0.1 M REMARK 280 HEPES PH 7.5, 10 % DMSO, VAPOR DIFFUSION, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 28.08050 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 34.83800 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 31.14550 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 34.83800 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 28.08050 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 31.14550 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: BIOLOGICAL UNIT IS A MONOMER REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLU B 140 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 140 CG CD OE1 OE2 REMARK 470 GLU B 44 CG CD OE1 OE2 REMARK 470 ASN B 74 CG OD1 ND2 REMARK 470 GLU B 75 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 112 -117.77 -129.70 REMARK 500 ALA B 112 -114.76 -136.69 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE I63 A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE I63 B 201 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4DRM RELATED DB: PDB REMARK 900 RELATED ID: 4DRN RELATED DB: PDB REMARK 900 RELATED ID: 4DRO RELATED DB: PDB REMARK 900 RELATED ID: 4DRP RELATED DB: PDB REMARK 900 RELATED ID: 4DRQ RELATED DB: PDB DBREF 4DRK A 16 140 UNP Q13451 FKBP5_HUMAN 16 140 DBREF 4DRK B 16 140 UNP Q13451 FKBP5_HUMAN 16 140 SEQADV 4DRK GLY A 13 UNP Q13451 EXPRESSION TAG SEQADV 4DRK ALA A 14 UNP Q13451 EXPRESSION TAG SEQADV 4DRK PRO A 15 UNP Q13451 EXPRESSION TAG SEQADV 4DRK THR A 19 UNP Q13451 ALA 19 CONFLICT SEQADV 4DRK GLY B 13 UNP Q13451 EXPRESSION TAG SEQADV 4DRK ALA B 14 UNP Q13451 EXPRESSION TAG SEQADV 4DRK PRO B 15 UNP Q13451 EXPRESSION TAG SEQADV 4DRK THR B 19 UNP Q13451 ALA 19 CONFLICT SEQRES 1 A 128 GLY ALA PRO ALA THR VAL THR GLU GLN GLY GLU ASP ILE SEQRES 2 A 128 THR SER LYS LYS ASP ARG GLY VAL LEU LYS ILE VAL LYS SEQRES 3 A 128 ARG VAL GLY ASN GLY GLU GLU THR PRO MET ILE GLY ASP SEQRES 4 A 128 LYS VAL TYR VAL HIS TYR LYS GLY LYS LEU SER ASN GLY SEQRES 5 A 128 LYS LYS PHE ASP SER SER HIS ASP ARG ASN GLU PRO PHE SEQRES 6 A 128 VAL PHE SER LEU GLY LYS GLY GLN VAL ILE LYS ALA TRP SEQRES 7 A 128 ASP ILE GLY VAL ALA THR MET LYS LYS GLY GLU ILE CYS SEQRES 8 A 128 HIS LEU LEU CYS LYS PRO GLU TYR ALA TYR GLY SER ALA SEQRES 9 A 128 GLY SER LEU PRO LYS ILE PRO SER ASN ALA THR LEU PHE SEQRES 10 A 128 PHE GLU ILE GLU LEU LEU ASP PHE LYS GLY GLU SEQRES 1 B 128 GLY ALA PRO ALA THR VAL THR GLU GLN GLY GLU ASP ILE SEQRES 2 B 128 THR SER LYS LYS ASP ARG GLY VAL LEU LYS ILE VAL LYS SEQRES 3 B 128 ARG VAL GLY ASN GLY GLU GLU THR PRO MET ILE GLY ASP SEQRES 4 B 128 LYS VAL TYR VAL HIS TYR LYS GLY LYS LEU SER ASN GLY SEQRES 5 B 128 LYS LYS PHE ASP SER SER HIS ASP ARG ASN GLU PRO PHE SEQRES 6 B 128 VAL PHE SER LEU GLY LYS GLY GLN VAL ILE LYS ALA TRP SEQRES 7 B 128 ASP ILE GLY VAL ALA THR MET LYS LYS GLY GLU ILE CYS SEQRES 8 B 128 HIS LEU LEU CYS LYS PRO GLU TYR ALA TYR GLY SER ALA SEQRES 9 B 128 GLY SER LEU PRO LYS ILE PRO SER ASN ALA THR LEU PHE SEQRES 10 B 128 PHE GLU ILE GLU LEU LEU ASP PHE LYS GLY GLU HET I63 A 201 42 HET I63 B 201 42 HETNAM I63 {3-[(1R)-3-(3,4-DIMETHOXYPHENYL)-1-({[(2S)-1-(3,3- HETNAM 2 I63 DIMETHYL-2-OXOPENTANOYL)PIPERIDIN-2-YL]CARBONYL}OXY) HETNAM 3 I63 PROPYL]PHENOXY}ACETIC ACID FORMUL 3 I63 2(C32 H41 N O9) FORMUL 5 HOH *397(H2 O) HELIX 1 1 GLY A 13 GLY A 22 1 10 HELIX 2 2 HIS A 71 ASN A 74 5 4 HELIX 3 3 ILE A 87 ALA A 95 1 9 HELIX 4 4 PRO A 109 ALA A 112 5 4 HELIX 5 5 ALA B 14 GLY B 22 1 9 HELIX 6 6 HIS B 71 ASN B 74 5 4 HELIX 7 7 ILE B 87 THR B 96 1 10 HELIX 8 8 PRO B 109 ALA B 112 5 4 SHEET 1 A 6 GLU A 23 ASP A 24 0 SHEET 2 A 6 VAL A 33 ARG A 39 -1 O LYS A 35 N GLU A 23 SHEET 3 A 6 ILE A 102 CYS A 107 -1 O LEU A 106 N LEU A 34 SHEET 4 A 6 LEU A 128 LYS A 138 -1 O LEU A 128 N CYS A 107 SHEET 5 A 6 LYS A 52 LEU A 61 -1 N LYS A 60 O PHE A 129 SHEET 6 A 6 LYS A 66 SER A 69 -1 O ASP A 68 N GLY A 59 SHEET 1 B 6 GLU A 23 ASP A 24 0 SHEET 2 B 6 VAL A 33 ARG A 39 -1 O LYS A 35 N GLU A 23 SHEET 3 B 6 ILE A 102 CYS A 107 -1 O LEU A 106 N LEU A 34 SHEET 4 B 6 LEU A 128 LYS A 138 -1 O LEU A 128 N CYS A 107 SHEET 5 B 6 LYS A 52 LEU A 61 -1 N LYS A 60 O PHE A 129 SHEET 6 B 6 PHE A 77 SER A 80 -1 O PHE A 79 N VAL A 53 SHEET 1 C 6 GLU B 23 ASP B 24 0 SHEET 2 C 6 VAL B 33 ARG B 39 -1 O LYS B 35 N GLU B 23 SHEET 3 C 6 ILE B 102 CYS B 107 -1 O HIS B 104 N ILE B 36 SHEET 4 C 6 LEU B 128 LYS B 138 -1 O LEU B 128 N CYS B 107 SHEET 5 C 6 LYS B 52 LEU B 61 -1 N LYS B 60 O PHE B 129 SHEET 6 C 6 LYS B 66 SER B 69 -1 O ASP B 68 N GLY B 59 SHEET 1 D 6 GLU B 23 ASP B 24 0 SHEET 2 D 6 VAL B 33 ARG B 39 -1 O LYS B 35 N GLU B 23 SHEET 3 D 6 ILE B 102 CYS B 107 -1 O HIS B 104 N ILE B 36 SHEET 4 D 6 LEU B 128 LYS B 138 -1 O LEU B 128 N CYS B 107 SHEET 5 D 6 LYS B 52 LEU B 61 -1 N LYS B 60 O PHE B 129 SHEET 6 D 6 PHE B 77 SER B 80 -1 O PHE B 79 N VAL B 53 CISPEP 1 LEU A 119 PRO A 120 0 3.70 CISPEP 2 LEU B 119 PRO B 120 0 7.04 SITE 1 AC1 18 THR A 19 GLU A 20 ARG A 31 TYR A 57 SITE 2 AC1 18 PHE A 67 ASP A 68 PHE A 77 GLY A 84 SITE 3 AC1 18 GLN A 85 VAL A 86 ILE A 87 TRP A 90 SITE 4 AC1 18 LYS A 108 ALA A 112 TYR A 113 HOH A 314 SITE 5 AC1 18 HOH A 324 HOH A 521 SITE 1 AC2 20 THR B 19 GLU B 20 ARG B 31 TYR B 57 SITE 2 AC2 20 PHE B 67 ASP B 68 GLY B 84 GLN B 85 SITE 3 AC2 20 VAL B 86 ILE B 87 TRP B 90 LYS B 108 SITE 4 AC2 20 ALA B 112 TYR B 113 ILE B 122 PHE B 130 SITE 5 AC2 20 HOH B 301 HOH B 327 HOH B 329 HOH B 432 CRYST1 56.161 62.291 69.676 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017806 0.000000 0.000000 0.00000 SCALE2 0.000000 0.016054 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014352 0.00000