data_4DRZ # _entry.id 4DRZ # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.379 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4DRZ pdb_00004drz 10.2210/pdb4drz/pdb RCSB RCSB070707 ? ? WWPDB D_1000070707 ? ? # _pdbx_database_PDB_obs_spr.id SPRSDE _pdbx_database_PDB_obs_spr.date 2012-02-29 _pdbx_database_PDB_obs_spr.pdb_id 4DRZ _pdbx_database_PDB_obs_spr.replace_pdb_id 2AED _pdbx_database_PDB_obs_spr.details ? # _pdbx_database_status.entry_id 4DRZ _pdbx_database_status.status_code REL _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2012-02-17 _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Wang, J.' 1 'Tempel, W.' 2 'Arrowsmith, C.H.' 3 'Edwards, A.M.' 4 'Sundstrom, M.' 5 'Weigelt, J.' 6 'Bochkarev, A.' 7 'Park, H.' 8 'Structural Genomics Consortium (SGC)' 9 # _citation.id primary _citation.title 'Crystal structure of human RAB14' _citation.journal_abbrev 'to be published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Wang, J.' 1 ? primary 'Tempel, W.' 2 ? primary 'Arrowsmith, C.H.' 3 ? primary 'Edwards, A.M.' 4 ? primary 'Sundstrom, M.' 5 ? primary 'Weigelt, J.' 6 ? primary 'Bochkarev, A.' 7 ? primary 'Park, H.' 8 ? # _cell.entry_id 4DRZ _cell.length_a 42.686 _cell.length_b 40.487 _cell.length_c 46.486 _cell.angle_alpha 90.000 _cell.angle_beta 108.950 _cell.angle_gamma 90.000 _cell.pdbx_unique_axis ? _cell.Z_PDB 2 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4DRZ _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.Int_Tables_number 4 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Ras-related protein Rab-14' 22020.910 1 ? ? 'UNP residues 1-177' ? 2 non-polymer syn "GUANOSINE-5'-DIPHOSPHATE" 443.201 1 ? ? ? ? 3 non-polymer syn 'CALCIUM ION' 40.078 1 ? ? ? ? 4 water nat water 18.015 41 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MGSSHHHHHHSSGLVPRGSMATAPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIK LQIWDTAGQGRFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKADLEAQRDVTYEEAKQ FAEENGLLFLEASAKTGENVEDAFLEAAKKIYQNIQ ; _entity_poly.pdbx_seq_one_letter_code_can ;MGSSHHHHHHSSGLVPRGSMATAPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIK LQIWDTAGQGRFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKADLEAQRDVTYEEAKQ FAEENGLLFLEASAKTGENVEDAFLEAAKKIYQNIQ ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 GLY n 1 3 SER n 1 4 SER n 1 5 HIS n 1 6 HIS n 1 7 HIS n 1 8 HIS n 1 9 HIS n 1 10 HIS n 1 11 SER n 1 12 SER n 1 13 GLY n 1 14 LEU n 1 15 VAL n 1 16 PRO n 1 17 ARG n 1 18 GLY n 1 19 SER n 1 20 MET n 1 21 ALA n 1 22 THR n 1 23 ALA n 1 24 PRO n 1 25 TYR n 1 26 ASN n 1 27 TYR n 1 28 SER n 1 29 TYR n 1 30 ILE n 1 31 PHE n 1 32 LYS n 1 33 TYR n 1 34 ILE n 1 35 ILE n 1 36 ILE n 1 37 GLY n 1 38 ASP n 1 39 MET n 1 40 GLY n 1 41 VAL n 1 42 GLY n 1 43 LYS n 1 44 SER n 1 45 CYS n 1 46 LEU n 1 47 LEU n 1 48 HIS n 1 49 GLN n 1 50 PHE n 1 51 THR n 1 52 GLU n 1 53 LYS n 1 54 LYS n 1 55 PHE n 1 56 MET n 1 57 ALA n 1 58 ASP n 1 59 CYS n 1 60 PRO n 1 61 HIS n 1 62 THR n 1 63 ILE n 1 64 GLY n 1 65 VAL n 1 66 GLU n 1 67 PHE n 1 68 GLY n 1 69 THR n 1 70 ARG n 1 71 ILE n 1 72 ILE n 1 73 GLU n 1 74 VAL n 1 75 SER n 1 76 GLY n 1 77 GLN n 1 78 LYS n 1 79 ILE n 1 80 LYS n 1 81 LEU n 1 82 GLN n 1 83 ILE n 1 84 TRP n 1 85 ASP n 1 86 THR n 1 87 ALA n 1 88 GLY n 1 89 GLN n 1 90 GLY n 1 91 ARG n 1 92 PHE n 1 93 ARG n 1 94 ALA n 1 95 VAL n 1 96 THR n 1 97 ARG n 1 98 SER n 1 99 TYR n 1 100 TYR n 1 101 ARG n 1 102 GLY n 1 103 ALA n 1 104 ALA n 1 105 GLY n 1 106 ALA n 1 107 LEU n 1 108 MET n 1 109 VAL n 1 110 TYR n 1 111 ASP n 1 112 ILE n 1 113 THR n 1 114 ARG n 1 115 ARG n 1 116 SER n 1 117 THR n 1 118 TYR n 1 119 ASN n 1 120 HIS n 1 121 LEU n 1 122 SER n 1 123 SER n 1 124 TRP n 1 125 LEU n 1 126 THR n 1 127 ASP n 1 128 ALA n 1 129 ARG n 1 130 ASN n 1 131 LEU n 1 132 THR n 1 133 ASN n 1 134 PRO n 1 135 ASN n 1 136 THR n 1 137 VAL n 1 138 ILE n 1 139 ILE n 1 140 LEU n 1 141 ILE n 1 142 GLY n 1 143 ASN n 1 144 LYS n 1 145 ALA n 1 146 ASP n 1 147 LEU n 1 148 GLU n 1 149 ALA n 1 150 GLN n 1 151 ARG n 1 152 ASP n 1 153 VAL n 1 154 THR n 1 155 TYR n 1 156 GLU n 1 157 GLU n 1 158 ALA n 1 159 LYS n 1 160 GLN n 1 161 PHE n 1 162 ALA n 1 163 GLU n 1 164 GLU n 1 165 ASN n 1 166 GLY n 1 167 LEU n 1 168 LEU n 1 169 PHE n 1 170 LEU n 1 171 GLU n 1 172 ALA n 1 173 SER n 1 174 ALA n 1 175 LYS n 1 176 THR n 1 177 GLY n 1 178 GLU n 1 179 ASN n 1 180 VAL n 1 181 GLU n 1 182 ASP n 1 183 ALA n 1 184 PHE n 1 185 LEU n 1 186 GLU n 1 187 ALA n 1 188 ALA n 1 189 LYS n 1 190 LYS n 1 191 ILE n 1 192 TYR n 1 193 GLN n 1 194 ASN n 1 195 ILE n 1 196 GLN n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene RAB14 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21 (DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name p28a-LIC _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code RAB14_HUMAN _struct_ref.pdbx_db_accession P61106 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MATAPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQERFRAVTRSY YRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKADLEAQRDVTYEEAKQFAEENGLLFLEASAKTGEN VEDAFLEAAKKIYQNIQ ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4DRZ _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 20 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 196 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P61106 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 177 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 177 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4DRZ MET A 1 ? UNP P61106 ? ? 'expression tag' -18 1 1 4DRZ GLY A 2 ? UNP P61106 ? ? 'expression tag' -17 2 1 4DRZ SER A 3 ? UNP P61106 ? ? 'expression tag' -16 3 1 4DRZ SER A 4 ? UNP P61106 ? ? 'expression tag' -15 4 1 4DRZ HIS A 5 ? UNP P61106 ? ? 'expression tag' -14 5 1 4DRZ HIS A 6 ? UNP P61106 ? ? 'expression tag' -13 6 1 4DRZ HIS A 7 ? UNP P61106 ? ? 'expression tag' -12 7 1 4DRZ HIS A 8 ? UNP P61106 ? ? 'expression tag' -11 8 1 4DRZ HIS A 9 ? UNP P61106 ? ? 'expression tag' -10 9 1 4DRZ HIS A 10 ? UNP P61106 ? ? 'expression tag' -9 10 1 4DRZ SER A 11 ? UNP P61106 ? ? 'expression tag' -8 11 1 4DRZ SER A 12 ? UNP P61106 ? ? 'expression tag' -7 12 1 4DRZ GLY A 13 ? UNP P61106 ? ? 'expression tag' -6 13 1 4DRZ LEU A 14 ? UNP P61106 ? ? 'expression tag' -5 14 1 4DRZ VAL A 15 ? UNP P61106 ? ? 'expression tag' -4 15 1 4DRZ PRO A 16 ? UNP P61106 ? ? 'expression tag' -3 16 1 4DRZ ARG A 17 ? UNP P61106 ? ? 'expression tag' -2 17 1 4DRZ GLY A 18 ? UNP P61106 ? ? 'expression tag' -1 18 1 4DRZ SER A 19 ? UNP P61106 ? ? 'expression tag' 0 19 1 4DRZ GLY A 90 ? UNP P61106 GLU 71 conflict 71 20 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CA non-polymer . 'CALCIUM ION' ? 'Ca 2' 40.078 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GDP 'RNA linking' n "GUANOSINE-5'-DIPHOSPHATE" ? 'C10 H15 N5 O11 P2' 443.201 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.entry_id 4DRZ _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_percent_sol 28.71 _exptl_crystal.density_Matthews 1.73 _exptl_crystal.density_meas ? _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.pH 7.2 _exptl_crystal_grow.temp ? _exptl_crystal_grow.pdbx_details '20% PEG-3350, 0.2M CALCIUM ACETATE, pH 7.2, vapor diffusion, hanging drop' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type SBC-3 _diffrn_detector.pdbx_collection_date 2005-06-30 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97901 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 19-BM' _diffrn_source.pdbx_wavelength_list 0.97901 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 19-BM # _reflns.entry_id 4DRZ _reflns.d_resolution_high 2.300 _reflns.d_resolution_low 30.000 _reflns.number_obs 6885 _reflns.pdbx_Rmerge_I_obs 0.134 _reflns.pdbx_netI_over_sigmaI 7.200 _reflns.pdbx_chi_squared 1.195 _reflns.pdbx_redundancy 3.200 _reflns.percent_possible_obs 95.000 _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.number_all ? _reflns.B_iso_Wilson_estimate ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 2.300 2.380 ? ? ? 0.403 ? ? 0.995 2.600 ? 570 81.200 1 1 2.380 2.480 ? ? ? 0.372 ? ? 1.089 2.700 ? 638 86.900 2 1 2.480 2.590 ? ? ? 0.310 ? ? 1.062 3.000 ? 654 93.400 3 1 2.590 2.730 ? ? ? 0.277 ? ? 1.152 3.200 ? 711 97.700 4 1 2.730 2.900 ? ? ? 0.249 ? ? 1.235 3.400 ? 703 98.700 5 1 2.900 3.120 ? ? ? 0.179 ? ? 1.134 3.600 ? 717 98.000 6 1 3.120 3.430 ? ? ? 0.140 ? ? 1.145 3.600 ? 700 98.700 7 1 3.430 3.930 ? ? ? 0.100 ? ? 1.208 3.500 ? 734 99.100 8 1 3.930 4.950 ? ? ? 0.086 ? ? 1.181 3.400 ? 719 98.500 9 1 4.950 30.000 ? ? ? 0.115 ? ? 1.601 3.300 ? 739 97.400 10 1 # _refine.entry_id 4DRZ _refine.ls_d_res_high 2.3000 _refine.ls_d_res_low 19.76 _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 95.6520 _refine.ls_number_reflns_obs 6534 _refine.ls_number_reflns_all ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details 'O, XFIT, COOT AND MOLPROBITY WERE ALSO USED DURING REFINEMENT' _refine.ls_R_factor_obs 0.1870 _refine.ls_R_factor_R_work 0.1837 _refine.ls_wR_factor_R_work 0.1850 _refine.ls_R_factor_R_free 0.2514 _refine.ls_wR_factor_R_free 0.2470 _refine.ls_percent_reflns_R_free 4.7750 _refine.ls_number_reflns_R_free 312 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 23.7080 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] 0.0440 _refine.aniso_B[2][2] -2.0410 _refine.aniso_B[3][3] 3.2260 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] 1.8920 _refine.aniso_B[2][3] 0.0000 _refine.correlation_coeff_Fo_to_Fc 0.9490 _refine.correlation_coeff_Fo_to_Fc_free 0.8990 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R 0.5020 _refine.pdbx_overall_ESU_R_Free 0.2740 _refine.overall_SU_ML 0.1900 _refine.overall_SU_B 17.1820 _refine.solvent_model_details 'MASK BULK SOLVENT' _refine.pdbx_solvent_vdw_probe_radii 1.2000 _refine.pdbx_solvent_ion_probe_radii 0.8000 _refine.pdbx_solvent_shrinkage_radii 0.8000 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model 'PDB ENTRY 1OIV' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set ? _refine.B_iso_max 71.600 _refine.B_iso_min 13.520 _refine.pdbx_overall_phase_error ? _refine.occupancy_max 1.000 _refine.occupancy_min 1.000 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.ls_R_factor_all ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1239 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 29 _refine_hist.number_atoms_solvent 41 _refine_hist.number_atoms_total 1309 _refine_hist.d_res_high 2.3000 _refine_hist.d_res_low 19.76 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id r_bond_refined_d 1290 0.012 0.020 ? ? 'X-RAY DIFFRACTION' r_bond_other_d 826 0.003 0.020 ? ? 'X-RAY DIFFRACTION' r_angle_refined_deg 1753 1.286 1.967 ? ? 'X-RAY DIFFRACTION' r_angle_other_deg 2012 0.850 3.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_1_deg 157 5.734 5.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_2_deg 58 35.912 24.483 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_3_deg 206 15.034 15.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_4_deg 6 18.919 15.000 ? ? 'X-RAY DIFFRACTION' r_chiral_restr 199 0.066 0.200 ? ? 'X-RAY DIFFRACTION' r_gen_planes_refined 1425 0.004 0.020 ? ? 'X-RAY DIFFRACTION' r_gen_planes_other 269 0.001 0.020 ? ? 'X-RAY DIFFRACTION' # loop_ _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_low _refine_ls_shell.d_res_high _refine_ls_shell.number_reflns_all _refine_ls_shell.percent_reflns_obs _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.number_reflns_R_free _refine_ls_shell.R_factor_R_free _refine_ls_shell.number_reflns_obs _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.R_factor_all _refine_ls_shell.pdbx_refine_id 20 2.359 2.300 494 82.591 388 0.199 20 0.289 . . . . . 'X-RAY DIFFRACTION' 20 2.424 2.359 445 88.090 373 0.215 19 0.364 . . . . . 'X-RAY DIFFRACTION' 20 2.493 2.424 457 91.028 391 0.214 25 0.276 . . . . . 'X-RAY DIFFRACTION' 20 2.570 2.493 437 97.025 404 0.198 20 0.330 . . . . . 'X-RAY DIFFRACTION' 20 2.653 2.570 418 97.608 391 0.215 17 0.335 . . . . . 'X-RAY DIFFRACTION' 20 2.746 2.653 408 98.039 387 0.216 13 0.189 . . . . . 'X-RAY DIFFRACTION' 20 2.848 2.746 389 99.486 372 0.194 15 0.233 . . . . . 'X-RAY DIFFRACTION' 20 2.963 2.848 380 96.579 347 0.215 20 0.273 . . . . . 'X-RAY DIFFRACTION' 20 3.094 2.963 365 98.904 343 0.194 18 0.285 . . . . . 'X-RAY DIFFRACTION' 20 3.243 3.094 337 98.813 318 0.179 15 0.237 . . . . . 'X-RAY DIFFRACTION' 20 3.416 3.243 333 98.799 308 0.183 21 0.264 . . . . . 'X-RAY DIFFRACTION' 20 3.621 3.416 308 99.026 295 0.172 10 0.226 . . . . . 'X-RAY DIFFRACTION' 20 3.867 3.621 291 98.625 272 0.172 15 0.182 . . . . . 'X-RAY DIFFRACTION' 20 4.171 3.867 259 98.842 239 0.161 17 0.228 . . . . . 'X-RAY DIFFRACTION' 20 4.560 4.171 246 97.967 222 0.142 19 0.173 . . . . . 'X-RAY DIFFRACTION' 20 5.084 4.560 224 97.321 210 0.139 8 0.241 . . . . . 'X-RAY DIFFRACTION' 20 5.842 5.084 200 93.000 178 0.187 8 0.308 . . . . . 'X-RAY DIFFRACTION' 20 7.088 5.842 161 99.379 151 0.205 9 0.375 . . . . . 'X-RAY DIFFRACTION' 20 9.756 7.088 122 100.000 120 0.177 2 0.186 . . . . . 'X-RAY DIFFRACTION' 20 30.000 9.756 78 85.897 66 0.200 1 0.049 . . . . . 'X-RAY DIFFRACTION' # _struct.entry_id 4DRZ _struct.title 'Crystal structure of human RAB14' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4DRZ _struct_keywords.text 'RAS, GTPASE, GTP, ONCOGENE, RAB14, STRUCTURAL GENOMICS CONSORTIUM, SGC, PROTEIN TRANSPORT' _struct_keywords.pdbx_keywords 'PROTEIN TRANSPORT' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLY A 42 ? LYS A 53 ? GLY A 23 LYS A 34 1 ? 12 HELX_P HELX_P2 2 VAL A 95 ? GLY A 102 ? VAL A 76 GLY A 83 1 ? 8 HELX_P HELX_P3 3 ARG A 114 ? HIS A 120 ? ARG A 95 HIS A 101 1 ? 7 HELX_P HELX_P4 4 HIS A 120 ? THR A 132 ? HIS A 101 THR A 113 1 ? 13 HELX_P HELX_P5 5 LEU A 147 ? ARG A 151 ? LEU A 128 ARG A 132 5 ? 5 HELX_P HELX_P6 6 THR A 154 ? GLY A 166 ? THR A 135 GLY A 147 1 ? 13 HELX_P HELX_P7 7 ASN A 179 ? GLN A 193 ? ASN A 160 GLN A 174 1 ? 15 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A SER 44 OG ? ? ? 1_555 C CA . CA ? ? A SER 25 A CA 202 1_555 ? ? ? ? ? ? ? 2.410 ? ? metalc2 metalc ? ? A ASP 85 OD2 ? ? ? 1_555 C CA . CA ? ? A ASP 66 A CA 202 1_555 ? ? ? ? ? ? ? 2.335 ? ? metalc3 metalc ? ? B GDP . O1B ? ? ? 1_555 C CA . CA ? ? A GDP 201 A CA 202 1_555 ? ? ? ? ? ? ? 2.317 ? ? metalc4 metalc ? ? C CA . CA ? ? ? 1_555 D HOH . O ? ? A CA 202 A HOH 319 1_555 ? ? ? ? ? ? ? 2.608 ? ? metalc5 metalc ? ? C CA . CA ? ? ? 1_555 D HOH . O ? ? A CA 202 A HOH 334 1_555 ? ? ? ? ? ? ? 2.345 ? ? metalc6 metalc ? ? C CA . CA ? ? ? 1_555 D HOH . O ? ? A CA 202 A HOH 340 1_555 ? ? ? ? ? ? ? 2.591 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 6 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? parallel A 3 4 ? parallel A 4 5 ? parallel A 5 6 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 PHE A 67 ? GLU A 73 ? PHE A 48 GLU A 54 A 2 LYS A 78 ? ASP A 85 ? LYS A 59 ASP A 66 A 3 TYR A 29 ? GLY A 37 ? TYR A 10 GLY A 18 A 4 ALA A 103 ? ASP A 111 ? ALA A 84 ASP A 92 A 5 VAL A 137 ? ASN A 143 ? VAL A 118 ASN A 124 A 6 LEU A 168 ? GLU A 171 ? LEU A 149 GLU A 152 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N GLY A 68 ? N GLY A 49 O ILE A 83 ? O ILE A 64 A 2 3 O GLN A 82 ? O GLN A 63 N TYR A 33 ? N TYR A 14 A 3 4 N ILE A 36 ? N ILE A 17 O VAL A 109 ? O VAL A 90 A 4 5 N MET A 108 ? N MET A 89 O ILE A 141 ? O ILE A 122 A 5 6 N LEU A 140 ? N LEU A 121 O LEU A 168 ? O LEU A 149 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A GDP 201 ? 18 'BINDING SITE FOR RESIDUE GDP A 201' AC2 Software A CA 202 ? 6 'BINDING SITE FOR RESIDUE CA A 202' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 18 GLY A 40 ? GLY A 21 . ? 1_555 ? 2 AC1 18 VAL A 41 ? VAL A 22 . ? 1_555 ? 3 AC1 18 GLY A 42 ? GLY A 23 . ? 1_555 ? 4 AC1 18 LYS A 43 ? LYS A 24 . ? 1_555 ? 5 AC1 18 SER A 44 ? SER A 25 . ? 1_555 ? 6 AC1 18 CYS A 45 ? CYS A 26 . ? 1_555 ? 7 AC1 18 ASP A 85 ? ASP A 66 . ? 1_555 ? 8 AC1 18 ASN A 143 ? ASN A 124 . ? 1_555 ? 9 AC1 18 LYS A 144 ? LYS A 125 . ? 1_555 ? 10 AC1 18 ASP A 146 ? ASP A 127 . ? 1_555 ? 11 AC1 18 LEU A 147 ? LEU A 128 . ? 1_555 ? 12 AC1 18 SER A 173 ? SER A 154 . ? 1_555 ? 13 AC1 18 ALA A 174 ? ALA A 155 . ? 1_555 ? 14 AC1 18 LYS A 175 ? LYS A 156 . ? 1_555 ? 15 AC1 18 CA C . ? CA A 202 . ? 1_555 ? 16 AC1 18 HOH D . ? HOH A 311 . ? 1_555 ? 17 AC1 18 HOH D . ? HOH A 319 . ? 1_555 ? 18 AC1 18 HOH D . ? HOH A 323 . ? 1_555 ? 19 AC2 6 SER A 44 ? SER A 25 . ? 1_555 ? 20 AC2 6 ASP A 85 ? ASP A 66 . ? 1_555 ? 21 AC2 6 GDP B . ? GDP A 201 . ? 1_555 ? 22 AC2 6 HOH D . ? HOH A 319 . ? 1_555 ? 23 AC2 6 HOH D . ? HOH A 334 . ? 1_555 ? 24 AC2 6 HOH D . ? HOH A 340 . ? 1_555 ? # _atom_sites.entry_id 4DRZ _atom_sites.fract_transf_matrix[1][1] 0.023427 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.008044 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.024699 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.022745 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C CA N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 -18 ? ? ? A . n A 1 2 GLY 2 -17 ? ? ? A . n A 1 3 SER 3 -16 ? ? ? A . n A 1 4 SER 4 -15 ? ? ? A . n A 1 5 HIS 5 -14 ? ? ? A . n A 1 6 HIS 6 -13 ? ? ? A . n A 1 7 HIS 7 -12 ? ? ? A . n A 1 8 HIS 8 -11 ? ? ? A . n A 1 9 HIS 9 -10 ? ? ? A . n A 1 10 HIS 10 -9 ? ? ? A . n A 1 11 SER 11 -8 ? ? ? A . n A 1 12 SER 12 -7 ? ? ? A . n A 1 13 GLY 13 -6 ? ? ? A . n A 1 14 LEU 14 -5 ? ? ? A . n A 1 15 VAL 15 -4 ? ? ? A . n A 1 16 PRO 16 -3 ? ? ? A . n A 1 17 ARG 17 -2 ? ? ? A . n A 1 18 GLY 18 -1 ? ? ? A . n A 1 19 SER 19 0 ? ? ? A . n A 1 20 MET 20 1 ? ? ? A . n A 1 21 ALA 21 2 ? ? ? A . n A 1 22 THR 22 3 ? ? ? A . n A 1 23 ALA 23 4 ? ? ? A . n A 1 24 PRO 24 5 ? ? ? A . n A 1 25 TYR 25 6 6 TYR TYR A . n A 1 26 ASN 26 7 7 ASN ASN A . n A 1 27 TYR 27 8 8 TYR TYR A . n A 1 28 SER 28 9 9 SER SER A . n A 1 29 TYR 29 10 10 TYR TYR A . n A 1 30 ILE 30 11 11 ILE ILE A . n A 1 31 PHE 31 12 12 PHE PHE A . n A 1 32 LYS 32 13 13 LYS LYS A . n A 1 33 TYR 33 14 14 TYR TYR A . n A 1 34 ILE 34 15 15 ILE ILE A . n A 1 35 ILE 35 16 16 ILE ILE A . n A 1 36 ILE 36 17 17 ILE ILE A . n A 1 37 GLY 37 18 18 GLY GLY A . n A 1 38 ASP 38 19 19 ASP ASP A . n A 1 39 MET 39 20 20 MET MET A . n A 1 40 GLY 40 21 21 GLY GLY A . n A 1 41 VAL 41 22 22 VAL VAL A . n A 1 42 GLY 42 23 23 GLY GLY A . n A 1 43 LYS 43 24 24 LYS LYS A . n A 1 44 SER 44 25 25 SER SER A . n A 1 45 CYS 45 26 26 CYS CYS A . n A 1 46 LEU 46 27 27 LEU LEU A . n A 1 47 LEU 47 28 28 LEU LEU A . n A 1 48 HIS 48 29 29 HIS HIS A . n A 1 49 GLN 49 30 30 GLN GLN A . n A 1 50 PHE 50 31 31 PHE PHE A . n A 1 51 THR 51 32 32 THR THR A . n A 1 52 GLU 52 33 33 GLU GLU A . n A 1 53 LYS 53 34 34 LYS LYS A . n A 1 54 LYS 54 35 35 LYS LYS A . n A 1 55 PHE 55 36 ? ? ? A . n A 1 56 MET 56 37 ? ? ? A . n A 1 57 ALA 57 38 ? ? ? A . n A 1 58 ASP 58 39 ? ? ? A . n A 1 59 CYS 59 40 40 CYS CYS A . n A 1 60 PRO 60 41 41 PRO PRO A . n A 1 61 HIS 61 42 42 HIS HIS A . n A 1 62 THR 62 43 43 THR THR A . n A 1 63 ILE 63 44 44 ILE ILE A . n A 1 64 GLY 64 45 45 GLY GLY A . n A 1 65 VAL 65 46 46 VAL VAL A . n A 1 66 GLU 66 47 47 GLU GLU A . n A 1 67 PHE 67 48 48 PHE PHE A . n A 1 68 GLY 68 49 49 GLY GLY A . n A 1 69 THR 69 50 50 THR THR A . n A 1 70 ARG 70 51 51 ARG ARG A . n A 1 71 ILE 71 52 52 ILE ILE A . n A 1 72 ILE 72 53 53 ILE ILE A . n A 1 73 GLU 73 54 54 GLU GLU A . n A 1 74 VAL 74 55 55 VAL VAL A . n A 1 75 SER 75 56 56 SER SER A . n A 1 76 GLY 76 57 57 GLY GLY A . n A 1 77 GLN 77 58 58 GLN GLN A . n A 1 78 LYS 78 59 59 LYS LYS A . n A 1 79 ILE 79 60 60 ILE ILE A . n A 1 80 LYS 80 61 61 LYS LYS A . n A 1 81 LEU 81 62 62 LEU LEU A . n A 1 82 GLN 82 63 63 GLN GLN A . n A 1 83 ILE 83 64 64 ILE ILE A . n A 1 84 TRP 84 65 65 TRP TRP A . n A 1 85 ASP 85 66 66 ASP ASP A . n A 1 86 THR 86 67 67 THR THR A . n A 1 87 ALA 87 68 68 ALA ALA A . n A 1 88 GLY 88 69 ? ? ? A . n A 1 89 GLN 89 70 ? ? ? A . n A 1 90 GLY 90 71 ? ? ? A . n A 1 91 ARG 91 72 ? ? ? A . n A 1 92 PHE 92 73 ? ? ? A . n A 1 93 ARG 93 74 ? ? ? A . n A 1 94 ALA 94 75 75 ALA ALA A . n A 1 95 VAL 95 76 76 VAL VAL A . n A 1 96 THR 96 77 77 THR THR A . n A 1 97 ARG 97 78 78 ARG ARG A . n A 1 98 SER 98 79 79 SER SER A . n A 1 99 TYR 99 80 80 TYR TYR A . n A 1 100 TYR 100 81 81 TYR TYR A . n A 1 101 ARG 101 82 82 ARG ARG A . n A 1 102 GLY 102 83 83 GLY GLY A . n A 1 103 ALA 103 84 84 ALA ALA A . n A 1 104 ALA 104 85 85 ALA ALA A . n A 1 105 GLY 105 86 86 GLY GLY A . n A 1 106 ALA 106 87 87 ALA ALA A . n A 1 107 LEU 107 88 88 LEU LEU A . n A 1 108 MET 108 89 89 MET MET A . n A 1 109 VAL 109 90 90 VAL VAL A . n A 1 110 TYR 110 91 91 TYR TYR A . n A 1 111 ASP 111 92 92 ASP ASP A . n A 1 112 ILE 112 93 93 ILE ILE A . n A 1 113 THR 113 94 94 THR THR A . n A 1 114 ARG 114 95 95 ARG ARG A . n A 1 115 ARG 115 96 96 ARG ARG A . n A 1 116 SER 116 97 97 SER SER A . n A 1 117 THR 117 98 98 THR THR A . n A 1 118 TYR 118 99 99 TYR TYR A . n A 1 119 ASN 119 100 100 ASN ASN A . n A 1 120 HIS 120 101 101 HIS HIS A . n A 1 121 LEU 121 102 102 LEU LEU A . n A 1 122 SER 122 103 103 SER SER A . n A 1 123 SER 123 104 104 SER SER A . n A 1 124 TRP 124 105 105 TRP TRP A . n A 1 125 LEU 125 106 106 LEU LEU A . n A 1 126 THR 126 107 107 THR THR A . n A 1 127 ASP 127 108 108 ASP ASP A . n A 1 128 ALA 128 109 109 ALA ALA A . n A 1 129 ARG 129 110 110 ARG ARG A . n A 1 130 ASN 130 111 111 ASN ASN A . n A 1 131 LEU 131 112 112 LEU LEU A . n A 1 132 THR 132 113 113 THR THR A . n A 1 133 ASN 133 114 114 ASN ASN A . n A 1 134 PRO 134 115 115 PRO PRO A . n A 1 135 ASN 135 116 116 ASN ASN A . n A 1 136 THR 136 117 117 THR THR A . n A 1 137 VAL 137 118 118 VAL VAL A . n A 1 138 ILE 138 119 119 ILE ILE A . n A 1 139 ILE 139 120 120 ILE ILE A . n A 1 140 LEU 140 121 121 LEU LEU A . n A 1 141 ILE 141 122 122 ILE ILE A . n A 1 142 GLY 142 123 123 GLY GLY A . n A 1 143 ASN 143 124 124 ASN ASN A . n A 1 144 LYS 144 125 125 LYS LYS A . n A 1 145 ALA 145 126 126 ALA ALA A . n A 1 146 ASP 146 127 127 ASP ASP A . n A 1 147 LEU 147 128 128 LEU LEU A . n A 1 148 GLU 148 129 129 GLU GLU A . n A 1 149 ALA 149 130 130 ALA ALA A . n A 1 150 GLN 150 131 131 GLN GLN A . n A 1 151 ARG 151 132 132 ARG ARG A . n A 1 152 ASP 152 133 133 ASP ASP A . n A 1 153 VAL 153 134 134 VAL VAL A . n A 1 154 THR 154 135 135 THR THR A . n A 1 155 TYR 155 136 136 TYR TYR A . n A 1 156 GLU 156 137 137 GLU GLU A . n A 1 157 GLU 157 138 138 GLU GLU A . n A 1 158 ALA 158 139 139 ALA ALA A . n A 1 159 LYS 159 140 140 LYS LYS A . n A 1 160 GLN 160 141 141 GLN GLN A . n A 1 161 PHE 161 142 142 PHE PHE A . n A 1 162 ALA 162 143 143 ALA ALA A . n A 1 163 GLU 163 144 144 GLU GLU A . n A 1 164 GLU 164 145 145 GLU GLU A . n A 1 165 ASN 165 146 146 ASN ASN A . n A 1 166 GLY 166 147 147 GLY GLY A . n A 1 167 LEU 167 148 148 LEU LEU A . n A 1 168 LEU 168 149 149 LEU LEU A . n A 1 169 PHE 169 150 150 PHE PHE A . n A 1 170 LEU 170 151 151 LEU LEU A . n A 1 171 GLU 171 152 152 GLU GLU A . n A 1 172 ALA 172 153 153 ALA ALA A . n A 1 173 SER 173 154 154 SER SER A . n A 1 174 ALA 174 155 155 ALA ALA A . n A 1 175 LYS 175 156 156 LYS LYS A . n A 1 176 THR 176 157 157 THR THR A . n A 1 177 GLY 177 158 158 GLY GLY A . n A 1 178 GLU 178 159 159 GLU GLU A . n A 1 179 ASN 179 160 160 ASN ASN A . n A 1 180 VAL 180 161 161 VAL VAL A . n A 1 181 GLU 181 162 162 GLU GLU A . n A 1 182 ASP 182 163 163 ASP ASP A . n A 1 183 ALA 183 164 164 ALA ALA A . n A 1 184 PHE 184 165 165 PHE PHE A . n A 1 185 LEU 185 166 166 LEU LEU A . n A 1 186 GLU 186 167 167 GLU GLU A . n A 1 187 ALA 187 168 168 ALA ALA A . n A 1 188 ALA 188 169 169 ALA ALA A . n A 1 189 LYS 189 170 170 LYS LYS A . n A 1 190 LYS 190 171 171 LYS LYS A . n A 1 191 ILE 191 172 172 ILE ILE A . n A 1 192 TYR 192 173 173 TYR TYR A . n A 1 193 GLN 193 174 174 GLN GLN A . n A 1 194 ASN 194 175 175 ASN ASN A . n A 1 195 ILE 195 176 ? ? ? A . n A 1 196 GLN 196 177 ? ? ? A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name ? _pdbx_SG_project.full_name_of_center 'Structural Genomics Consortium' _pdbx_SG_project.initial_of_center SGC # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GDP 1 201 502 GDP GDP A . C 3 CA 1 202 1 CA CA A . D 4 HOH 1 301 301 HOH HOH A . D 4 HOH 2 302 302 HOH HOH A . D 4 HOH 3 303 303 HOH HOH A . D 4 HOH 4 304 304 HOH HOH A . D 4 HOH 5 305 305 HOH HOH A . D 4 HOH 6 306 306 HOH HOH A . D 4 HOH 7 307 308 HOH HOH A . D 4 HOH 8 308 309 HOH HOH A . D 4 HOH 9 309 311 HOH HOH A . D 4 HOH 10 310 313 HOH HOH A . D 4 HOH 11 311 314 HOH HOH A . D 4 HOH 12 312 315 HOH HOH A . D 4 HOH 13 313 316 HOH HOH A . D 4 HOH 14 314 317 HOH HOH A . D 4 HOH 15 315 318 HOH HOH A . D 4 HOH 16 316 319 HOH HOH A . D 4 HOH 17 317 320 HOH HOH A . D 4 HOH 18 318 321 HOH HOH A . D 4 HOH 19 319 322 HOH HOH A . D 4 HOH 20 320 323 HOH HOH A . D 4 HOH 21 321 324 HOH HOH A . D 4 HOH 22 322 325 HOH HOH A . D 4 HOH 23 323 326 HOH HOH A . D 4 HOH 24 324 327 HOH HOH A . D 4 HOH 25 325 328 HOH HOH A . D 4 HOH 26 326 329 HOH HOH A . D 4 HOH 27 327 330 HOH HOH A . D 4 HOH 28 328 331 HOH HOH A . D 4 HOH 29 329 332 HOH HOH A . D 4 HOH 30 330 333 HOH HOH A . D 4 HOH 31 331 334 HOH HOH A . D 4 HOH 32 332 335 HOH HOH A . D 4 HOH 33 333 336 HOH HOH A . D 4 HOH 34 334 338 HOH HOH A . D 4 HOH 35 335 340 HOH HOH A . D 4 HOH 36 336 341 HOH HOH A . D 4 HOH 37 337 342 HOH HOH A . D 4 HOH 38 338 343 HOH HOH A . D 4 HOH 39 339 344 HOH HOH A . D 4 HOH 40 340 345 HOH HOH A . D 4 HOH 41 341 346 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OG ? A SER 44 ? A SER 25 ? 1_555 CA ? C CA . ? A CA 202 ? 1_555 OD2 ? A ASP 85 ? A ASP 66 ? 1_555 77.1 ? 2 OG ? A SER 44 ? A SER 25 ? 1_555 CA ? C CA . ? A CA 202 ? 1_555 O1B ? B GDP . ? A GDP 201 ? 1_555 85.2 ? 3 OD2 ? A ASP 85 ? A ASP 66 ? 1_555 CA ? C CA . ? A CA 202 ? 1_555 O1B ? B GDP . ? A GDP 201 ? 1_555 101.2 ? 4 OG ? A SER 44 ? A SER 25 ? 1_555 CA ? C CA . ? A CA 202 ? 1_555 O ? D HOH . ? A HOH 319 ? 1_555 71.3 ? 5 OD2 ? A ASP 85 ? A ASP 66 ? 1_555 CA ? C CA . ? A CA 202 ? 1_555 O ? D HOH . ? A HOH 319 ? 1_555 148.4 ? 6 O1B ? B GDP . ? A GDP 201 ? 1_555 CA ? C CA . ? A CA 202 ? 1_555 O ? D HOH . ? A HOH 319 ? 1_555 79.1 ? 7 OG ? A SER 44 ? A SER 25 ? 1_555 CA ? C CA . ? A CA 202 ? 1_555 O ? D HOH . ? A HOH 334 ? 1_555 77.3 ? 8 OD2 ? A ASP 85 ? A ASP 66 ? 1_555 CA ? C CA . ? A CA 202 ? 1_555 O ? D HOH . ? A HOH 334 ? 1_555 91.0 ? 9 O1B ? B GDP . ? A GDP 201 ? 1_555 CA ? C CA . ? A CA 202 ? 1_555 O ? D HOH . ? A HOH 334 ? 1_555 155.9 ? 10 O ? D HOH . ? A HOH 319 ? 1_555 CA ? C CA . ? A CA 202 ? 1_555 O ? D HOH . ? A HOH 334 ? 1_555 79.6 ? 11 OG ? A SER 44 ? A SER 25 ? 1_555 CA ? C CA . ? A CA 202 ? 1_555 O ? D HOH . ? A HOH 340 ? 1_555 147.1 ? 12 OD2 ? A ASP 85 ? A ASP 66 ? 1_555 CA ? C CA . ? A CA 202 ? 1_555 O ? D HOH . ? A HOH 340 ? 1_555 70.1 ? 13 O1B ? B GDP . ? A GDP 201 ? 1_555 CA ? C CA . ? A CA 202 ? 1_555 O ? D HOH . ? A HOH 340 ? 1_555 104.2 ? 14 O ? D HOH . ? A HOH 319 ? 1_555 CA ? C CA . ? A CA 202 ? 1_555 O ? D HOH . ? A HOH 340 ? 1_555 141.0 ? 15 O ? D HOH . ? A HOH 334 ? 1_555 CA ? C CA . ? A CA 202 ? 1_555 O ? D HOH . ? A HOH 340 ? 1_555 99.5 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2012-02-29 2 'Structure model' 1 1 2017-11-15 3 'Structure model' 1 2 2023-09-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Refinement description' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' software 2 3 'Structure model' chem_comp_atom 3 3 'Structure model' chem_comp_bond 4 3 'Structure model' database_2 5 3 'Structure model' pdbx_initial_refinement_model 6 3 'Structure model' pdbx_struct_conn_angle 7 3 'Structure model' struct_conn 8 3 'Structure model' struct_ref_seq_dif 9 3 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_software.classification' 2 2 'Structure model' '_software.contact_author' 3 2 'Structure model' '_software.contact_author_email' 4 2 'Structure model' '_software.date' 5 2 'Structure model' '_software.language' 6 2 'Structure model' '_software.location' 7 2 'Structure model' '_software.name' 8 2 'Structure model' '_software.type' 9 2 'Structure model' '_software.version' 10 3 'Structure model' '_database_2.pdbx_DOI' 11 3 'Structure model' '_database_2.pdbx_database_accession' 12 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 13 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 14 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 15 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 16 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 17 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 18 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 19 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 20 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 21 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 22 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 23 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 24 3 'Structure model' '_pdbx_struct_conn_angle.value' 25 3 'Structure model' '_struct_conn.pdbx_dist_value' 26 3 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 27 3 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 28 3 'Structure model' '_struct_conn.ptnr1_label_asym_id' 29 3 'Structure model' '_struct_conn.ptnr1_label_atom_id' 30 3 'Structure model' '_struct_conn.ptnr1_label_comp_id' 31 3 'Structure model' '_struct_conn.ptnr1_label_seq_id' 32 3 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 33 3 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 34 3 'Structure model' '_struct_conn.ptnr2_label_asym_id' 35 3 'Structure model' '_struct_conn.ptnr2_label_atom_id' 36 3 'Structure model' '_struct_conn.ptnr2_label_comp_id' 37 3 'Structure model' '_struct_ref_seq_dif.details' 38 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 39 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 40 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x 10.4983 _pdbx_refine_tls.origin_y 0.3775 _pdbx_refine_tls.origin_z 7.7912 _pdbx_refine_tls.T[1][1] 0.1014 _pdbx_refine_tls.T[2][2] 0.0696 _pdbx_refine_tls.T[3][3] 0.0381 _pdbx_refine_tls.T[1][2] -0.0043 _pdbx_refine_tls.T[1][3] 0.0060 _pdbx_refine_tls.T[2][3] 0.0002 _pdbx_refine_tls.L[1][1] 5.8722 _pdbx_refine_tls.L[2][2] 1.4339 _pdbx_refine_tls.L[3][3] 1.3844 _pdbx_refine_tls.L[1][2] -0.2741 _pdbx_refine_tls.L[1][3] 0.1826 _pdbx_refine_tls.L[2][3] -0.3099 _pdbx_refine_tls.S[1][1] 0.0436 _pdbx_refine_tls.S[2][2] -0.0226 _pdbx_refine_tls.S[3][3] -0.0210 _pdbx_refine_tls.S[1][2] -0.3596 _pdbx_refine_tls.S[1][3] -0.0025 _pdbx_refine_tls.S[2][3] -0.2130 _pdbx_refine_tls.S[2][1] 0.0532 _pdbx_refine_tls.S[3][1] 0.0264 _pdbx_refine_tls.S[3][2] 0.1359 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection_details _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection 'X-RAY DIFFRACTION' 1 1 A 6 A 175 ? . . . . ? 'X-RAY DIFFRACTION' 2 1 A 201 A 201 ? . . . . ? 'X-RAY DIFFRACTION' 3 1 A 301 A 341 ? . . . . ? # _phasing.method MR # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 DENZO . ? package 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data reduction' http://www.hkl-xray.com/ ? ? 2 SCALEPACK . ? package 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data scaling' http://www.hkl-xray.com/ ? ? 3 MOLREP . ? program 'Alexei Vaguine' alexei@ysbl.york.ac.uk phasing http://www.ccp4.ac.uk/dist/html/molrep.html Fortran_77 ? 4 REFMAC 5.6.0117 ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 5 PDB_EXTRACT 3.11 'August 3, 2011' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id THR _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 113 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi -108.12 _pdbx_validate_torsion.psi -136.32 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A TYR 6 ? CG ? A TYR 25 CG 2 1 Y 1 A TYR 6 ? CD1 ? A TYR 25 CD1 3 1 Y 1 A TYR 6 ? CD2 ? A TYR 25 CD2 4 1 Y 1 A TYR 6 ? CE1 ? A TYR 25 CE1 5 1 Y 1 A TYR 6 ? CE2 ? A TYR 25 CE2 6 1 Y 1 A TYR 6 ? CZ ? A TYR 25 CZ 7 1 Y 1 A TYR 6 ? OH ? A TYR 25 OH 8 1 Y 1 A LYS 34 ? CD ? A LYS 53 CD 9 1 Y 1 A LYS 34 ? CE ? A LYS 53 CE 10 1 Y 1 A LYS 34 ? NZ ? A LYS 53 NZ 11 1 Y 1 A LYS 35 ? CG ? A LYS 54 CG 12 1 Y 1 A LYS 35 ? CD ? A LYS 54 CD 13 1 Y 1 A LYS 35 ? CE ? A LYS 54 CE 14 1 Y 1 A LYS 35 ? NZ ? A LYS 54 NZ 15 1 Y 1 A VAL 55 ? CG1 ? A VAL 74 CG1 16 1 Y 1 A VAL 55 ? CG2 ? A VAL 74 CG2 17 1 Y 1 A LYS 61 ? NZ ? A LYS 80 NZ 18 1 Y 1 A ARG 78 ? CD ? A ARG 97 CD 19 1 Y 1 A ARG 78 ? NE ? A ARG 97 NE 20 1 Y 1 A ARG 78 ? CZ ? A ARG 97 CZ 21 1 Y 1 A ARG 78 ? NH1 ? A ARG 97 NH1 22 1 Y 1 A ARG 78 ? NH2 ? A ARG 97 NH2 23 1 Y 1 A LYS 140 ? CE ? A LYS 159 CE 24 1 Y 1 A LYS 140 ? NZ ? A LYS 159 NZ 25 1 Y 1 A GLN 141 ? CD ? A GLN 160 CD 26 1 Y 1 A GLN 141 ? OE1 ? A GLN 160 OE1 27 1 Y 1 A GLN 141 ? NE2 ? A GLN 160 NE2 28 1 Y 1 A LYS 156 ? NZ ? A LYS 175 NZ 29 1 Y 1 A GLU 159 ? CG ? A GLU 178 CG 30 1 Y 1 A GLU 159 ? CD ? A GLU 178 CD 31 1 Y 1 A GLU 159 ? OE1 ? A GLU 178 OE1 32 1 Y 1 A GLU 159 ? OE2 ? A GLU 178 OE2 33 1 Y 1 A LYS 170 ? CE ? A LYS 189 CE 34 1 Y 1 A LYS 170 ? NZ ? A LYS 189 NZ 35 1 Y 1 A LYS 171 ? CE ? A LYS 190 CE 36 1 Y 1 A LYS 171 ? NZ ? A LYS 190 NZ # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET -18 ? A MET 1 2 1 Y 1 A GLY -17 ? A GLY 2 3 1 Y 1 A SER -16 ? A SER 3 4 1 Y 1 A SER -15 ? A SER 4 5 1 Y 1 A HIS -14 ? A HIS 5 6 1 Y 1 A HIS -13 ? A HIS 6 7 1 Y 1 A HIS -12 ? A HIS 7 8 1 Y 1 A HIS -11 ? A HIS 8 9 1 Y 1 A HIS -10 ? A HIS 9 10 1 Y 1 A HIS -9 ? A HIS 10 11 1 Y 1 A SER -8 ? A SER 11 12 1 Y 1 A SER -7 ? A SER 12 13 1 Y 1 A GLY -6 ? A GLY 13 14 1 Y 1 A LEU -5 ? A LEU 14 15 1 Y 1 A VAL -4 ? A VAL 15 16 1 Y 1 A PRO -3 ? A PRO 16 17 1 Y 1 A ARG -2 ? A ARG 17 18 1 Y 1 A GLY -1 ? A GLY 18 19 1 Y 1 A SER 0 ? A SER 19 20 1 Y 1 A MET 1 ? A MET 20 21 1 Y 1 A ALA 2 ? A ALA 21 22 1 Y 1 A THR 3 ? A THR 22 23 1 Y 1 A ALA 4 ? A ALA 23 24 1 Y 1 A PRO 5 ? A PRO 24 25 1 Y 1 A PHE 36 ? A PHE 55 26 1 Y 1 A MET 37 ? A MET 56 27 1 Y 1 A ALA 38 ? A ALA 57 28 1 Y 1 A ASP 39 ? A ASP 58 29 1 Y 1 A GLY 69 ? A GLY 88 30 1 Y 1 A GLN 70 ? A GLN 89 31 1 Y 1 A GLY 71 ? A GLY 90 32 1 Y 1 A ARG 72 ? A ARG 91 33 1 Y 1 A PHE 73 ? A PHE 92 34 1 Y 1 A ARG 74 ? A ARG 93 35 1 Y 1 A ILE 176 ? A ILE 195 36 1 Y 1 A GLN 177 ? A GLN 196 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CA CA CA N N 74 CYS N N N N 75 CYS CA C N R 76 CYS C C N N 77 CYS O O N N 78 CYS CB C N N 79 CYS SG S N N 80 CYS OXT O N N 81 CYS H H N N 82 CYS H2 H N N 83 CYS HA H N N 84 CYS HB2 H N N 85 CYS HB3 H N N 86 CYS HG H N N 87 CYS HXT H N N 88 GDP PB P N N 89 GDP O1B O N N 90 GDP O2B O N N 91 GDP O3B O N N 92 GDP O3A O N N 93 GDP PA P N N 94 GDP O1A O N N 95 GDP O2A O N N 96 GDP "O5'" O N N 97 GDP "C5'" C N N 98 GDP "C4'" C N R 99 GDP "O4'" O N N 100 GDP "C3'" C N S 101 GDP "O3'" O N N 102 GDP "C2'" C N R 103 GDP "O2'" O N N 104 GDP "C1'" C N R 105 GDP N9 N Y N 106 GDP C8 C Y N 107 GDP N7 N Y N 108 GDP C5 C Y N 109 GDP C6 C N N 110 GDP O6 O N N 111 GDP N1 N N N 112 GDP C2 C N N 113 GDP N2 N N N 114 GDP N3 N N N 115 GDP C4 C Y N 116 GDP HOB2 H N N 117 GDP HOB3 H N N 118 GDP HOA2 H N N 119 GDP "H5'" H N N 120 GDP "H5''" H N N 121 GDP "H4'" H N N 122 GDP "H3'" H N N 123 GDP "HO3'" H N N 124 GDP "H2'" H N N 125 GDP "HO2'" H N N 126 GDP "H1'" H N N 127 GDP H8 H N N 128 GDP HN1 H N N 129 GDP HN21 H N N 130 GDP HN22 H N N 131 GLN N N N N 132 GLN CA C N S 133 GLN C C N N 134 GLN O O N N 135 GLN CB C N N 136 GLN CG C N N 137 GLN CD C N N 138 GLN OE1 O N N 139 GLN NE2 N N N 140 GLN OXT O N N 141 GLN H H N N 142 GLN H2 H N N 143 GLN HA H N N 144 GLN HB2 H N N 145 GLN HB3 H N N 146 GLN HG2 H N N 147 GLN HG3 H N N 148 GLN HE21 H N N 149 GLN HE22 H N N 150 GLN HXT H N N 151 GLU N N N N 152 GLU CA C N S 153 GLU C C N N 154 GLU O O N N 155 GLU CB C N N 156 GLU CG C N N 157 GLU CD C N N 158 GLU OE1 O N N 159 GLU OE2 O N N 160 GLU OXT O N N 161 GLU H H N N 162 GLU H2 H N N 163 GLU HA H N N 164 GLU HB2 H N N 165 GLU HB3 H N N 166 GLU HG2 H N N 167 GLU HG3 H N N 168 GLU HE2 H N N 169 GLU HXT H N N 170 GLY N N N N 171 GLY CA C N N 172 GLY C C N N 173 GLY O O N N 174 GLY OXT O N N 175 GLY H H N N 176 GLY H2 H N N 177 GLY HA2 H N N 178 GLY HA3 H N N 179 GLY HXT H N N 180 HIS N N N N 181 HIS CA C N S 182 HIS C C N N 183 HIS O O N N 184 HIS CB C N N 185 HIS CG C Y N 186 HIS ND1 N Y N 187 HIS CD2 C Y N 188 HIS CE1 C Y N 189 HIS NE2 N Y N 190 HIS OXT O N N 191 HIS H H N N 192 HIS H2 H N N 193 HIS HA H N N 194 HIS HB2 H N N 195 HIS HB3 H N N 196 HIS HD1 H N N 197 HIS HD2 H N N 198 HIS HE1 H N N 199 HIS HE2 H N N 200 HIS HXT H N N 201 HOH O O N N 202 HOH H1 H N N 203 HOH H2 H N N 204 ILE N N N N 205 ILE CA C N S 206 ILE C C N N 207 ILE O O N N 208 ILE CB C N S 209 ILE CG1 C N N 210 ILE CG2 C N N 211 ILE CD1 C N N 212 ILE OXT O N N 213 ILE H H N N 214 ILE H2 H N N 215 ILE HA H N N 216 ILE HB H N N 217 ILE HG12 H N N 218 ILE HG13 H N N 219 ILE HG21 H N N 220 ILE HG22 H N N 221 ILE HG23 H N N 222 ILE HD11 H N N 223 ILE HD12 H N N 224 ILE HD13 H N N 225 ILE HXT H N N 226 LEU N N N N 227 LEU CA C N S 228 LEU C C N N 229 LEU O O N N 230 LEU CB C N N 231 LEU CG C N N 232 LEU CD1 C N N 233 LEU CD2 C N N 234 LEU OXT O N N 235 LEU H H N N 236 LEU H2 H N N 237 LEU HA H N N 238 LEU HB2 H N N 239 LEU HB3 H N N 240 LEU HG H N N 241 LEU HD11 H N N 242 LEU HD12 H N N 243 LEU HD13 H N N 244 LEU HD21 H N N 245 LEU HD22 H N N 246 LEU HD23 H N N 247 LEU HXT H N N 248 LYS N N N N 249 LYS CA C N S 250 LYS C C N N 251 LYS O O N N 252 LYS CB C N N 253 LYS CG C N N 254 LYS CD C N N 255 LYS CE C N N 256 LYS NZ N N N 257 LYS OXT O N N 258 LYS H H N N 259 LYS H2 H N N 260 LYS HA H N N 261 LYS HB2 H N N 262 LYS HB3 H N N 263 LYS HG2 H N N 264 LYS HG3 H N N 265 LYS HD2 H N N 266 LYS HD3 H N N 267 LYS HE2 H N N 268 LYS HE3 H N N 269 LYS HZ1 H N N 270 LYS HZ2 H N N 271 LYS HZ3 H N N 272 LYS HXT H N N 273 MET N N N N 274 MET CA C N S 275 MET C C N N 276 MET O O N N 277 MET CB C N N 278 MET CG C N N 279 MET SD S N N 280 MET CE C N N 281 MET OXT O N N 282 MET H H N N 283 MET H2 H N N 284 MET HA H N N 285 MET HB2 H N N 286 MET HB3 H N N 287 MET HG2 H N N 288 MET HG3 H N N 289 MET HE1 H N N 290 MET HE2 H N N 291 MET HE3 H N N 292 MET HXT H N N 293 PHE N N N N 294 PHE CA C N S 295 PHE C C N N 296 PHE O O N N 297 PHE CB C N N 298 PHE CG C Y N 299 PHE CD1 C Y N 300 PHE CD2 C Y N 301 PHE CE1 C Y N 302 PHE CE2 C Y N 303 PHE CZ C Y N 304 PHE OXT O N N 305 PHE H H N N 306 PHE H2 H N N 307 PHE HA H N N 308 PHE HB2 H N N 309 PHE HB3 H N N 310 PHE HD1 H N N 311 PHE HD2 H N N 312 PHE HE1 H N N 313 PHE HE2 H N N 314 PHE HZ H N N 315 PHE HXT H N N 316 PRO N N N N 317 PRO CA C N S 318 PRO C C N N 319 PRO O O N N 320 PRO CB C N N 321 PRO CG C N N 322 PRO CD C N N 323 PRO OXT O N N 324 PRO H H N N 325 PRO HA H N N 326 PRO HB2 H N N 327 PRO HB3 H N N 328 PRO HG2 H N N 329 PRO HG3 H N N 330 PRO HD2 H N N 331 PRO HD3 H N N 332 PRO HXT H N N 333 SER N N N N 334 SER CA C N S 335 SER C C N N 336 SER O O N N 337 SER CB C N N 338 SER OG O N N 339 SER OXT O N N 340 SER H H N N 341 SER H2 H N N 342 SER HA H N N 343 SER HB2 H N N 344 SER HB3 H N N 345 SER HG H N N 346 SER HXT H N N 347 THR N N N N 348 THR CA C N S 349 THR C C N N 350 THR O O N N 351 THR CB C N R 352 THR OG1 O N N 353 THR CG2 C N N 354 THR OXT O N N 355 THR H H N N 356 THR H2 H N N 357 THR HA H N N 358 THR HB H N N 359 THR HG1 H N N 360 THR HG21 H N N 361 THR HG22 H N N 362 THR HG23 H N N 363 THR HXT H N N 364 TRP N N N N 365 TRP CA C N S 366 TRP C C N N 367 TRP O O N N 368 TRP CB C N N 369 TRP CG C Y N 370 TRP CD1 C Y N 371 TRP CD2 C Y N 372 TRP NE1 N Y N 373 TRP CE2 C Y N 374 TRP CE3 C Y N 375 TRP CZ2 C Y N 376 TRP CZ3 C Y N 377 TRP CH2 C Y N 378 TRP OXT O N N 379 TRP H H N N 380 TRP H2 H N N 381 TRP HA H N N 382 TRP HB2 H N N 383 TRP HB3 H N N 384 TRP HD1 H N N 385 TRP HE1 H N N 386 TRP HE3 H N N 387 TRP HZ2 H N N 388 TRP HZ3 H N N 389 TRP HH2 H N N 390 TRP HXT H N N 391 TYR N N N N 392 TYR CA C N S 393 TYR C C N N 394 TYR O O N N 395 TYR CB C N N 396 TYR CG C Y N 397 TYR CD1 C Y N 398 TYR CD2 C Y N 399 TYR CE1 C Y N 400 TYR CE2 C Y N 401 TYR CZ C Y N 402 TYR OH O N N 403 TYR OXT O N N 404 TYR H H N N 405 TYR H2 H N N 406 TYR HA H N N 407 TYR HB2 H N N 408 TYR HB3 H N N 409 TYR HD1 H N N 410 TYR HD2 H N N 411 TYR HE1 H N N 412 TYR HE2 H N N 413 TYR HH H N N 414 TYR HXT H N N 415 VAL N N N N 416 VAL CA C N S 417 VAL C C N N 418 VAL O O N N 419 VAL CB C N N 420 VAL CG1 C N N 421 VAL CG2 C N N 422 VAL OXT O N N 423 VAL H H N N 424 VAL H2 H N N 425 VAL HA H N N 426 VAL HB H N N 427 VAL HG11 H N N 428 VAL HG12 H N N 429 VAL HG13 H N N 430 VAL HG21 H N N 431 VAL HG22 H N N 432 VAL HG23 H N N 433 VAL HXT H N N 434 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GDP PB O1B doub N N 83 GDP PB O2B sing N N 84 GDP PB O3B sing N N 85 GDP PB O3A sing N N 86 GDP O2B HOB2 sing N N 87 GDP O3B HOB3 sing N N 88 GDP O3A PA sing N N 89 GDP PA O1A doub N N 90 GDP PA O2A sing N N 91 GDP PA "O5'" sing N N 92 GDP O2A HOA2 sing N N 93 GDP "O5'" "C5'" sing N N 94 GDP "C5'" "C4'" sing N N 95 GDP "C5'" "H5'" sing N N 96 GDP "C5'" "H5''" sing N N 97 GDP "C4'" "O4'" sing N N 98 GDP "C4'" "C3'" sing N N 99 GDP "C4'" "H4'" sing N N 100 GDP "O4'" "C1'" sing N N 101 GDP "C3'" "O3'" sing N N 102 GDP "C3'" "C2'" sing N N 103 GDP "C3'" "H3'" sing N N 104 GDP "O3'" "HO3'" sing N N 105 GDP "C2'" "O2'" sing N N 106 GDP "C2'" "C1'" sing N N 107 GDP "C2'" "H2'" sing N N 108 GDP "O2'" "HO2'" sing N N 109 GDP "C1'" N9 sing N N 110 GDP "C1'" "H1'" sing N N 111 GDP N9 C8 sing Y N 112 GDP N9 C4 sing Y N 113 GDP C8 N7 doub Y N 114 GDP C8 H8 sing N N 115 GDP N7 C5 sing Y N 116 GDP C5 C6 sing N N 117 GDP C5 C4 doub Y N 118 GDP C6 O6 doub N N 119 GDP C6 N1 sing N N 120 GDP N1 C2 sing N N 121 GDP N1 HN1 sing N N 122 GDP C2 N2 sing N N 123 GDP C2 N3 doub N N 124 GDP N2 HN21 sing N N 125 GDP N2 HN22 sing N N 126 GDP N3 C4 sing N N 127 GLN N CA sing N N 128 GLN N H sing N N 129 GLN N H2 sing N N 130 GLN CA C sing N N 131 GLN CA CB sing N N 132 GLN CA HA sing N N 133 GLN C O doub N N 134 GLN C OXT sing N N 135 GLN CB CG sing N N 136 GLN CB HB2 sing N N 137 GLN CB HB3 sing N N 138 GLN CG CD sing N N 139 GLN CG HG2 sing N N 140 GLN CG HG3 sing N N 141 GLN CD OE1 doub N N 142 GLN CD NE2 sing N N 143 GLN NE2 HE21 sing N N 144 GLN NE2 HE22 sing N N 145 GLN OXT HXT sing N N 146 GLU N CA sing N N 147 GLU N H sing N N 148 GLU N H2 sing N N 149 GLU CA C sing N N 150 GLU CA CB sing N N 151 GLU CA HA sing N N 152 GLU C O doub N N 153 GLU C OXT sing N N 154 GLU CB CG sing N N 155 GLU CB HB2 sing N N 156 GLU CB HB3 sing N N 157 GLU CG CD sing N N 158 GLU CG HG2 sing N N 159 GLU CG HG3 sing N N 160 GLU CD OE1 doub N N 161 GLU CD OE2 sing N N 162 GLU OE2 HE2 sing N N 163 GLU OXT HXT sing N N 164 GLY N CA sing N N 165 GLY N H sing N N 166 GLY N H2 sing N N 167 GLY CA C sing N N 168 GLY CA HA2 sing N N 169 GLY CA HA3 sing N N 170 GLY C O doub N N 171 GLY C OXT sing N N 172 GLY OXT HXT sing N N 173 HIS N CA sing N N 174 HIS N H sing N N 175 HIS N H2 sing N N 176 HIS CA C sing N N 177 HIS CA CB sing N N 178 HIS CA HA sing N N 179 HIS C O doub N N 180 HIS C OXT sing N N 181 HIS CB CG sing N N 182 HIS CB HB2 sing N N 183 HIS CB HB3 sing N N 184 HIS CG ND1 sing Y N 185 HIS CG CD2 doub Y N 186 HIS ND1 CE1 doub Y N 187 HIS ND1 HD1 sing N N 188 HIS CD2 NE2 sing Y N 189 HIS CD2 HD2 sing N N 190 HIS CE1 NE2 sing Y N 191 HIS CE1 HE1 sing N N 192 HIS NE2 HE2 sing N N 193 HIS OXT HXT sing N N 194 HOH O H1 sing N N 195 HOH O H2 sing N N 196 ILE N CA sing N N 197 ILE N H sing N N 198 ILE N H2 sing N N 199 ILE CA C sing N N 200 ILE CA CB sing N N 201 ILE CA HA sing N N 202 ILE C O doub N N 203 ILE C OXT sing N N 204 ILE CB CG1 sing N N 205 ILE CB CG2 sing N N 206 ILE CB HB sing N N 207 ILE CG1 CD1 sing N N 208 ILE CG1 HG12 sing N N 209 ILE CG1 HG13 sing N N 210 ILE CG2 HG21 sing N N 211 ILE CG2 HG22 sing N N 212 ILE CG2 HG23 sing N N 213 ILE CD1 HD11 sing N N 214 ILE CD1 HD12 sing N N 215 ILE CD1 HD13 sing N N 216 ILE OXT HXT sing N N 217 LEU N CA sing N N 218 LEU N H sing N N 219 LEU N H2 sing N N 220 LEU CA C sing N N 221 LEU CA CB sing N N 222 LEU CA HA sing N N 223 LEU C O doub N N 224 LEU C OXT sing N N 225 LEU CB CG sing N N 226 LEU CB HB2 sing N N 227 LEU CB HB3 sing N N 228 LEU CG CD1 sing N N 229 LEU CG CD2 sing N N 230 LEU CG HG sing N N 231 LEU CD1 HD11 sing N N 232 LEU CD1 HD12 sing N N 233 LEU CD1 HD13 sing N N 234 LEU CD2 HD21 sing N N 235 LEU CD2 HD22 sing N N 236 LEU CD2 HD23 sing N N 237 LEU OXT HXT sing N N 238 LYS N CA sing N N 239 LYS N H sing N N 240 LYS N H2 sing N N 241 LYS CA C sing N N 242 LYS CA CB sing N N 243 LYS CA HA sing N N 244 LYS C O doub N N 245 LYS C OXT sing N N 246 LYS CB CG sing N N 247 LYS CB HB2 sing N N 248 LYS CB HB3 sing N N 249 LYS CG CD sing N N 250 LYS CG HG2 sing N N 251 LYS CG HG3 sing N N 252 LYS CD CE sing N N 253 LYS CD HD2 sing N N 254 LYS CD HD3 sing N N 255 LYS CE NZ sing N N 256 LYS CE HE2 sing N N 257 LYS CE HE3 sing N N 258 LYS NZ HZ1 sing N N 259 LYS NZ HZ2 sing N N 260 LYS NZ HZ3 sing N N 261 LYS OXT HXT sing N N 262 MET N CA sing N N 263 MET N H sing N N 264 MET N H2 sing N N 265 MET CA C sing N N 266 MET CA CB sing N N 267 MET CA HA sing N N 268 MET C O doub N N 269 MET C OXT sing N N 270 MET CB CG sing N N 271 MET CB HB2 sing N N 272 MET CB HB3 sing N N 273 MET CG SD sing N N 274 MET CG HG2 sing N N 275 MET CG HG3 sing N N 276 MET SD CE sing N N 277 MET CE HE1 sing N N 278 MET CE HE2 sing N N 279 MET CE HE3 sing N N 280 MET OXT HXT sing N N 281 PHE N CA sing N N 282 PHE N H sing N N 283 PHE N H2 sing N N 284 PHE CA C sing N N 285 PHE CA CB sing N N 286 PHE CA HA sing N N 287 PHE C O doub N N 288 PHE C OXT sing N N 289 PHE CB CG sing N N 290 PHE CB HB2 sing N N 291 PHE CB HB3 sing N N 292 PHE CG CD1 doub Y N 293 PHE CG CD2 sing Y N 294 PHE CD1 CE1 sing Y N 295 PHE CD1 HD1 sing N N 296 PHE CD2 CE2 doub Y N 297 PHE CD2 HD2 sing N N 298 PHE CE1 CZ doub Y N 299 PHE CE1 HE1 sing N N 300 PHE CE2 CZ sing Y N 301 PHE CE2 HE2 sing N N 302 PHE CZ HZ sing N N 303 PHE OXT HXT sing N N 304 PRO N CA sing N N 305 PRO N CD sing N N 306 PRO N H sing N N 307 PRO CA C sing N N 308 PRO CA CB sing N N 309 PRO CA HA sing N N 310 PRO C O doub N N 311 PRO C OXT sing N N 312 PRO CB CG sing N N 313 PRO CB HB2 sing N N 314 PRO CB HB3 sing N N 315 PRO CG CD sing N N 316 PRO CG HG2 sing N N 317 PRO CG HG3 sing N N 318 PRO CD HD2 sing N N 319 PRO CD HD3 sing N N 320 PRO OXT HXT sing N N 321 SER N CA sing N N 322 SER N H sing N N 323 SER N H2 sing N N 324 SER CA C sing N N 325 SER CA CB sing N N 326 SER CA HA sing N N 327 SER C O doub N N 328 SER C OXT sing N N 329 SER CB OG sing N N 330 SER CB HB2 sing N N 331 SER CB HB3 sing N N 332 SER OG HG sing N N 333 SER OXT HXT sing N N 334 THR N CA sing N N 335 THR N H sing N N 336 THR N H2 sing N N 337 THR CA C sing N N 338 THR CA CB sing N N 339 THR CA HA sing N N 340 THR C O doub N N 341 THR C OXT sing N N 342 THR CB OG1 sing N N 343 THR CB CG2 sing N N 344 THR CB HB sing N N 345 THR OG1 HG1 sing N N 346 THR CG2 HG21 sing N N 347 THR CG2 HG22 sing N N 348 THR CG2 HG23 sing N N 349 THR OXT HXT sing N N 350 TRP N CA sing N N 351 TRP N H sing N N 352 TRP N H2 sing N N 353 TRP CA C sing N N 354 TRP CA CB sing N N 355 TRP CA HA sing N N 356 TRP C O doub N N 357 TRP C OXT sing N N 358 TRP CB CG sing N N 359 TRP CB HB2 sing N N 360 TRP CB HB3 sing N N 361 TRP CG CD1 doub Y N 362 TRP CG CD2 sing Y N 363 TRP CD1 NE1 sing Y N 364 TRP CD1 HD1 sing N N 365 TRP CD2 CE2 doub Y N 366 TRP CD2 CE3 sing Y N 367 TRP NE1 CE2 sing Y N 368 TRP NE1 HE1 sing N N 369 TRP CE2 CZ2 sing Y N 370 TRP CE3 CZ3 doub Y N 371 TRP CE3 HE3 sing N N 372 TRP CZ2 CH2 doub Y N 373 TRP CZ2 HZ2 sing N N 374 TRP CZ3 CH2 sing Y N 375 TRP CZ3 HZ3 sing N N 376 TRP CH2 HH2 sing N N 377 TRP OXT HXT sing N N 378 TYR N CA sing N N 379 TYR N H sing N N 380 TYR N H2 sing N N 381 TYR CA C sing N N 382 TYR CA CB sing N N 383 TYR CA HA sing N N 384 TYR C O doub N N 385 TYR C OXT sing N N 386 TYR CB CG sing N N 387 TYR CB HB2 sing N N 388 TYR CB HB3 sing N N 389 TYR CG CD1 doub Y N 390 TYR CG CD2 sing Y N 391 TYR CD1 CE1 sing Y N 392 TYR CD1 HD1 sing N N 393 TYR CD2 CE2 doub Y N 394 TYR CD2 HD2 sing N N 395 TYR CE1 CZ doub Y N 396 TYR CE1 HE1 sing N N 397 TYR CE2 CZ sing Y N 398 TYR CE2 HE2 sing N N 399 TYR CZ OH sing N N 400 TYR OH HH sing N N 401 TYR OXT HXT sing N N 402 VAL N CA sing N N 403 VAL N H sing N N 404 VAL N H2 sing N N 405 VAL CA C sing N N 406 VAL CA CB sing N N 407 VAL CA HA sing N N 408 VAL C O doub N N 409 VAL C OXT sing N N 410 VAL CB CG1 sing N N 411 VAL CB CG2 sing N N 412 VAL CB HB sing N N 413 VAL CG1 HG11 sing N N 414 VAL CG1 HG12 sing N N 415 VAL CG1 HG13 sing N N 416 VAL CG2 HG21 sing N N 417 VAL CG2 HG22 sing N N 418 VAL CG2 HG23 sing N N 419 VAL OXT HXT sing N N 420 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 "GUANOSINE-5'-DIPHOSPHATE" GDP 3 'CALCIUM ION' CA 4 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1OIV _pdbx_initial_refinement_model.details 'PDB ENTRY 1OIV' #