HEADER ISOMERASE 18-FEB-12 4DSG TITLE CRYSTAL STRUCTURE OF OXIDIZED UDP-GALACTOPYRANOSE MUTASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: UDP-GALACTOPYRANOSE MUTASE; COMPND 3 CHAIN: A, B; COMPND 4 EC: 5.4.99.9; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: TRYPANOSOMA CRUZI; SOURCE 3 ORGANISM_TAXID: 5693; SOURCE 4 GENE: TC00.1047053507993.160; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS ROSSMANN FOLD, FLAVIN ADENINE DINUCLEOTIDE, ISOMERASE EXPDTA X-RAY DIFFRACTION AUTHOR H.SINGH,R.DHATWALIA,J.J.TANNER REVDAT 3 13-SEP-23 4DSG 1 REMARK SEQADV REVDAT 2 05-SEP-12 4DSG 1 JRNL REVDAT 1 13-JUN-12 4DSG 0 JRNL AUTH R.DHATWALIA,H.SINGH,M.OPPENHEIMER,P.SOBRADO,J.J.TANNER JRNL TITL CRYSTAL STRUCTURES OF TRYPANOSOMA CRUZI UDP-GALACTOPYRANOSE JRNL TITL 2 MUTASE IMPLICATE FLEXIBILITY OF THE HISTIDINE LOOP IN ENZYME JRNL TITL 3 ACTIVATION. JRNL REF BIOCHEMISTRY V. 51 4968 2012 JRNL REFN ISSN 0006-2960 JRNL PMID 22646091 JRNL DOI 10.1021/BI300498C REMARK 2 REMARK 2 RESOLUTION. 2.25 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.6.2_432 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.25 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.94 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 3 NUMBER OF REFLECTIONS : 101705 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.184 REMARK 3 R VALUE (WORKING SET) : 0.183 REMARK 3 FREE R VALUE : 0.213 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.010 REMARK 3 FREE R VALUE TEST SET COUNT : 5093 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 46.9466 - 4.8444 0.96 9950 544 0.1725 0.1878 REMARK 3 2 4.8444 - 3.8457 0.99 9764 524 0.1341 0.1470 REMARK 3 3 3.8457 - 3.3597 0.99 9691 504 0.1845 0.2055 REMARK 3 4 3.3597 - 3.0526 0.99 9667 499 0.1942 0.2455 REMARK 3 5 3.0526 - 2.8338 1.00 9652 515 0.1928 0.2336 REMARK 3 6 2.8338 - 2.6668 1.00 9595 501 0.1941 0.2281 REMARK 3 7 2.6668 - 2.5332 1.00 9595 531 0.2045 0.2512 REMARK 3 8 2.5332 - 2.4230 1.00 9598 481 0.2085 0.2524 REMARK 3 9 2.4230 - 2.3297 1.00 9594 486 0.2221 0.2741 REMARK 3 10 2.3297 - 2.2490 1.00 9506 508 0.2463 0.2979 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.20 REMARK 3 SHRINKAGE RADIUS : 0.95 REMARK 3 K_SOL : 0.35 REMARK 3 B_SOL : 27.65 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.320 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 19.600 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 29.94 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 2.88560 REMARK 3 B22 (A**2) : 2.88560 REMARK 3 B33 (A**2) : -5.77120 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 7901 REMARK 3 ANGLE : 1.122 10801 REMARK 3 CHIRALITY : 0.075 1138 REMARK 3 PLANARITY : 0.005 1372 REMARK 3 DIHEDRAL : 15.180 2927 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A REMARK 3 ORIGIN FOR THE GROUP (A): 65.9513 -12.1473 -35.0285 REMARK 3 T TENSOR REMARK 3 T11: 0.1345 T22: -0.0073 REMARK 3 T33: 0.0338 T12: -0.0424 REMARK 3 T13: 0.0034 T23: 0.0128 REMARK 3 L TENSOR REMARK 3 L11: 0.0825 L22: 1.3368 REMARK 3 L33: 0.3578 L12: 0.0370 REMARK 3 L13: -0.0459 L23: -0.6957 REMARK 3 S TENSOR REMARK 3 S11: -0.0031 S12: -0.0140 S13: -0.0101 REMARK 3 S21: 0.2667 S22: -0.0524 S23: 0.0702 REMARK 3 S31: -0.1457 S32: -0.0098 S33: 0.0304 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN B REMARK 3 ORIGIN FOR THE GROUP (A): 69.7720 -41.2222 -67.8647 REMARK 3 T TENSOR REMARK 3 T11: 0.0141 T22: 0.1104 REMARK 3 T33: 0.0645 T12: -0.0285 REMARK 3 T13: -0.0263 T23: -0.0243 REMARK 3 L TENSOR REMARK 3 L11: 0.4318 L22: 0.2690 REMARK 3 L33: 0.4481 L12: -0.0193 REMARK 3 L13: -0.2159 L23: 0.1997 REMARK 3 S TENSOR REMARK 3 S11: 0.0023 S12: -0.1216 S13: 0.0948 REMARK 3 S21: -0.0273 S22: 0.0565 S23: 0.0174 REMARK 3 S31: -0.0188 S32: 0.1783 S33: -0.0587 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4DSG COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 24-FEB-12. REMARK 100 THE DEPOSITION ID IS D_1000070724. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 06-AUG-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97915 REMARK 200 MONOCHROMATOR : ROSENBAUM-ROCK DOUBLE CRYSTAL REMARK 200 SI(111) REMARK 200 OPTICS : ROSENBAUM-ROCK VERTICAL FOCUSING REMARK 200 MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 101725 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.249 REMARK 200 RESOLUTION RANGE LOW (A) : 55.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 200 DATA REDUNDANCY : 5.100 REMARK 200 R MERGE (I) : 0.10500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.0770 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.25 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.33 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 5.20 REMARK 200 R MERGE FOR SHELL (I) : 0.54200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.214 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 3UTE REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 74.15 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.76 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.0 M AMMONIUM SULFATE, 0.5% PEG8000, REMARK 280 0.1 M HEPES, PH 7.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE REMARK 280 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 65 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/6 REMARK 290 6555 X-Y,X,Z+5/6 REMARK 290 7555 Y,X,-Z+2/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+1/3 REMARK 290 10555 -Y,-X,-Z+1/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+5/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 236.13667 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 118.06833 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 177.10250 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 59.03417 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 295.17083 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 236.13667 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 118.06833 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 59.03417 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 177.10250 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 295.17083 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A -2 REMARK 465 ILE A -1 REMARK 465 ALA A 0 REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 GLU A 3 REMARK 465 GLN A 477 REMARK 465 LYS A 478 REMARK 465 ASP A 479 REMARK 465 MET A 480 REMARK 465 VAL A 481 REMARK 465 ALA B -2 REMARK 465 ILE B -1 REMARK 465 ALA B 0 REMARK 465 MET B 1 REMARK 465 ALA B 2 REMARK 465 GLU B 3 REMARK 465 LEU B 4 REMARK 465 LEU B 5 REMARK 465 GLY B 466 REMARK 465 THR B 467 REMARK 465 ARG B 468 REMARK 465 ALA B 469 REMARK 465 THR B 470 REMARK 465 GLN B 477 REMARK 465 LYS B 478 REMARK 465 ASP B 479 REMARK 465 MET B 480 REMARK 465 VAL B 481 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LEU A 5 CG CD1 CD2 REMARK 470 LYS A 31 CE NZ REMARK 470 ARG A 47 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 52 CG CD OE1 OE2 REMARK 470 LYS A 115 NZ REMARK 470 ARG A 123 CZ NH1 NH2 REMARK 470 LYS A 278 CE NZ REMARK 470 GLU A 341 CD OE1 OE2 REMARK 470 LYS A 354 CD CE NZ REMARK 470 ARG A 428 CZ NH1 NH2 REMARK 470 GLU A 454 CD OE1 OE2 REMARK 470 ASN A 460 OD1 ND2 REMARK 470 ARG A 463 CG CD NE CZ NH1 NH2 REMARK 470 THR A 470 OG1 CG2 REMARK 470 LYS B 31 CE NZ REMARK 470 ASP B 40 CG OD1 OD2 REMARK 470 GLU B 52 CG CD OE1 OE2 REMARK 470 ARG B 123 CZ NH1 NH2 REMARK 470 GLU B 171 CG CD OE1 OE2 REMARK 470 GLU B 174 CG CD OE1 OE2 REMARK 470 ARG B 184 CZ NH1 NH2 REMARK 470 ARG B 187 NE CZ NH1 NH2 REMARK 470 GLU B 252 CD OE1 OE2 REMARK 470 LYS B 273 CD CE NZ REMARK 470 LYS B 278 CE NZ REMARK 470 GLU B 282 CD OE1 OE2 REMARK 470 GLU B 341 CG CD OE1 OE2 REMARK 470 LYS B 354 CD CE NZ REMARK 470 ASN B 404 OD1 ND2 REMARK 470 GLU B 407 CG CD OE1 OE2 REMARK 470 GLU B 454 CD OE1 OE2 REMARK 470 ASN B 460 OD1 ND2 REMARK 470 ARG B 463 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 59 57.06 -94.60 REMARK 500 PHE A 152 -58.04 -126.63 REMARK 500 PHE A 234 43.47 -101.93 REMARK 500 CYS A 314 -77.64 -103.65 REMARK 500 LEU B 59 63.34 -101.31 REMARK 500 PHE B 152 -60.35 -126.03 REMARK 500 ASN B 192 55.21 35.96 REMARK 500 PHE B 234 48.50 -98.43 REMARK 500 CYS B 314 -81.16 -101.18 REMARK 500 LEU B 475 -165.61 61.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FAD A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE UDP A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FAD B 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE UDP B 502 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4DSH RELATED DB: PDB DBREF 4DSG A 1 480 UNP Q4E1W2 Q4E1W2_TRYCC 1 480 DBREF 4DSG B 1 480 UNP Q4E1W2 Q4E1W2_TRYCC 1 480 SEQADV 4DSG ALA A -2 UNP Q4E1W2 EXPRESSION TAG SEQADV 4DSG ILE A -1 UNP Q4E1W2 EXPRESSION TAG SEQADV 4DSG ALA A 0 UNP Q4E1W2 EXPRESSION TAG SEQADV 4DSG VAL A 481 UNP Q4E1W2 CLONING ARTIFACT SEQADV 4DSG ALA B -2 UNP Q4E1W2 EXPRESSION TAG SEQADV 4DSG ILE B -1 UNP Q4E1W2 EXPRESSION TAG SEQADV 4DSG ALA B 0 UNP Q4E1W2 EXPRESSION TAG SEQADV 4DSG VAL B 481 UNP Q4E1W2 CLONING ARTIFACT SEQRES 1 A 484 ALA ILE ALA MET ALA GLU LEU LEU THR PRO LYS ILE VAL SEQRES 2 A 484 ILE ILE GLY ALA GLY PRO THR GLY LEU GLY ALA ALA VAL SEQRES 3 A 484 ARG LEU THR GLU LEU GLY TYR LYS ASN TRP HIS LEU TYR SEQRES 4 A 484 GLU CYS ASN ASP THR PRO GLY GLY LEU SER ARG SER PHE SEQRES 5 A 484 LEU ASP GLU ASN GLY PHE THR TRP ASP LEU GLY GLY HIS SEQRES 6 A 484 VAL ILE PHE SER HIS TYR GLN TYR PHE ASP ASP VAL MET SEQRES 7 A 484 ASP TRP ALA VAL GLN GLY TRP ASN VAL LEU GLN ARG GLU SEQRES 8 A 484 SER TRP VAL TRP VAL ARG GLY ARG TRP VAL PRO TYR PRO SEQRES 9 A 484 PHE GLN ASN ASN ILE HIS ARG LEU PRO GLU GLN ASP ARG SEQRES 10 A 484 LYS ARG CYS LEU ASP GLU LEU VAL ARG SER HIS ALA ARG SEQRES 11 A 484 THR TYR THR GLU PRO PRO ASN ASN PHE GLU GLU SER PHE SEQRES 12 A 484 THR ARG GLN PHE GLY GLU GLY ILE ALA ASP ILE PHE MET SEQRES 13 A 484 ARG PRO TYR ASN PHE LYS VAL TRP ALA VAL PRO PRO CYS SEQRES 14 A 484 LEU MET SER THR GLU TRP VAL GLU GLU ARG VAL ALA PRO SEQRES 15 A 484 VAL ASP LEU GLU ARG ILE ARG ARG ASN ILE GLN GLU ASN SEQRES 16 A 484 ARG ASP ASP LEU GLY TRP GLY PRO ASN ALA THR PHE ARG SEQRES 17 A 484 PHE PRO GLN ARG GLY GLY THR GLY ILE ILE TYR GLN ALA SEQRES 18 A 484 ILE LYS GLU LYS LEU PRO SER GLU LYS LEU THR PHE ASN SEQRES 19 A 484 SER GLY PHE GLN ALA ILE ALA ILE ASP ALA ASP ALA LYS SEQRES 20 A 484 THR ILE THR PHE SER ASN GLY GLU VAL VAL SER TYR ASP SEQRES 21 A 484 TYR LEU ILE SER THR VAL PRO PHE ASP ASN LEU LEU ARG SEQRES 22 A 484 MET THR LYS GLY THR GLY PHE LYS GLY TYR ASP GLU TRP SEQRES 23 A 484 PRO ALA ILE ALA ASP LYS MET VAL TYR SER SER THR ASN SEQRES 24 A 484 VAL ILE GLY ILE GLY VAL LYS GLY THR PRO PRO PRO HIS SEQRES 25 A 484 LEU LYS THR ALA CYS TRP LEU TYR PHE PRO GLU ASP THR SEQRES 26 A 484 SER PRO PHE TYR ARG ALA THR VAL PHE SER ASN TYR SER SEQRES 27 A 484 LYS TYR ASN VAL PRO GLU GLY HIS TRP SER LEU MET LEU SEQRES 28 A 484 GLU VAL SER GLU SER LYS TYR LYS PRO VAL ASN HIS SER SEQRES 29 A 484 THR LEU ILE GLU ASP CYS ILE VAL GLY CYS LEU ALA SER SEQRES 30 A 484 ASN LEU LEU LEU PRO GLU ASP LEU LEU VAL SER LYS TRP SEQRES 31 A 484 HIS TYR ARG ILE GLU LYS GLY TYR PRO THR PRO PHE ILE SEQRES 32 A 484 GLY ARG ASN ASN LEU LEU GLU LYS ALA GLN PRO GLU LEU SEQRES 33 A 484 MET SER ARG CYS ILE TYR SER ARG GLY ARG PHE GLY ALA SEQRES 34 A 484 TRP ARG TYR GLU VAL GLY ASN GLN ASP HIS SER PHE MET SEQRES 35 A 484 GLN GLY VAL GLU ALA ILE ASP HIS VAL LEU GLY LEU ALA SEQRES 36 A 484 THR GLU GLU THR THR VAL ALA ASN PRO GLY ARG VAL ASN SEQRES 37 A 484 GLY THR ARG ALA THR THR HIS PHE GLY LEU LEU GLN LYS SEQRES 38 A 484 ASP MET VAL SEQRES 1 B 484 ALA ILE ALA MET ALA GLU LEU LEU THR PRO LYS ILE VAL SEQRES 2 B 484 ILE ILE GLY ALA GLY PRO THR GLY LEU GLY ALA ALA VAL SEQRES 3 B 484 ARG LEU THR GLU LEU GLY TYR LYS ASN TRP HIS LEU TYR SEQRES 4 B 484 GLU CYS ASN ASP THR PRO GLY GLY LEU SER ARG SER PHE SEQRES 5 B 484 LEU ASP GLU ASN GLY PHE THR TRP ASP LEU GLY GLY HIS SEQRES 6 B 484 VAL ILE PHE SER HIS TYR GLN TYR PHE ASP ASP VAL MET SEQRES 7 B 484 ASP TRP ALA VAL GLN GLY TRP ASN VAL LEU GLN ARG GLU SEQRES 8 B 484 SER TRP VAL TRP VAL ARG GLY ARG TRP VAL PRO TYR PRO SEQRES 9 B 484 PHE GLN ASN ASN ILE HIS ARG LEU PRO GLU GLN ASP ARG SEQRES 10 B 484 LYS ARG CYS LEU ASP GLU LEU VAL ARG SER HIS ALA ARG SEQRES 11 B 484 THR TYR THR GLU PRO PRO ASN ASN PHE GLU GLU SER PHE SEQRES 12 B 484 THR ARG GLN PHE GLY GLU GLY ILE ALA ASP ILE PHE MET SEQRES 13 B 484 ARG PRO TYR ASN PHE LYS VAL TRP ALA VAL PRO PRO CYS SEQRES 14 B 484 LEU MET SER THR GLU TRP VAL GLU GLU ARG VAL ALA PRO SEQRES 15 B 484 VAL ASP LEU GLU ARG ILE ARG ARG ASN ILE GLN GLU ASN SEQRES 16 B 484 ARG ASP ASP LEU GLY TRP GLY PRO ASN ALA THR PHE ARG SEQRES 17 B 484 PHE PRO GLN ARG GLY GLY THR GLY ILE ILE TYR GLN ALA SEQRES 18 B 484 ILE LYS GLU LYS LEU PRO SER GLU LYS LEU THR PHE ASN SEQRES 19 B 484 SER GLY PHE GLN ALA ILE ALA ILE ASP ALA ASP ALA LYS SEQRES 20 B 484 THR ILE THR PHE SER ASN GLY GLU VAL VAL SER TYR ASP SEQRES 21 B 484 TYR LEU ILE SER THR VAL PRO PHE ASP ASN LEU LEU ARG SEQRES 22 B 484 MET THR LYS GLY THR GLY PHE LYS GLY TYR ASP GLU TRP SEQRES 23 B 484 PRO ALA ILE ALA ASP LYS MET VAL TYR SER SER THR ASN SEQRES 24 B 484 VAL ILE GLY ILE GLY VAL LYS GLY THR PRO PRO PRO HIS SEQRES 25 B 484 LEU LYS THR ALA CYS TRP LEU TYR PHE PRO GLU ASP THR SEQRES 26 B 484 SER PRO PHE TYR ARG ALA THR VAL PHE SER ASN TYR SER SEQRES 27 B 484 LYS TYR ASN VAL PRO GLU GLY HIS TRP SER LEU MET LEU SEQRES 28 B 484 GLU VAL SER GLU SER LYS TYR LYS PRO VAL ASN HIS SER SEQRES 29 B 484 THR LEU ILE GLU ASP CYS ILE VAL GLY CYS LEU ALA SER SEQRES 30 B 484 ASN LEU LEU LEU PRO GLU ASP LEU LEU VAL SER LYS TRP SEQRES 31 B 484 HIS TYR ARG ILE GLU LYS GLY TYR PRO THR PRO PHE ILE SEQRES 32 B 484 GLY ARG ASN ASN LEU LEU GLU LYS ALA GLN PRO GLU LEU SEQRES 33 B 484 MET SER ARG CYS ILE TYR SER ARG GLY ARG PHE GLY ALA SEQRES 34 B 484 TRP ARG TYR GLU VAL GLY ASN GLN ASP HIS SER PHE MET SEQRES 35 B 484 GLN GLY VAL GLU ALA ILE ASP HIS VAL LEU GLY LEU ALA SEQRES 36 B 484 THR GLU GLU THR THR VAL ALA ASN PRO GLY ARG VAL ASN SEQRES 37 B 484 GLY THR ARG ALA THR THR HIS PHE GLY LEU LEU GLN LYS SEQRES 38 B 484 ASP MET VAL HET FAD A 501 53 HET UDP A 502 25 HET SO4 A 503 5 HET FAD B 501 53 HET UDP B 502 25 HETNAM FAD FLAVIN-ADENINE DINUCLEOTIDE HETNAM UDP URIDINE-5'-DIPHOSPHATE HETNAM SO4 SULFATE ION FORMUL 3 FAD 2(C27 H33 N9 O15 P2) FORMUL 4 UDP 2(C9 H14 N2 O12 P2) FORMUL 5 SO4 O4 S 2- FORMUL 8 HOH *381(H2 O) HELIX 1 1 GLY A 15 LEU A 28 1 14 HELIX 2 2 GLY A 43 SER A 46 5 4 HELIX 3 3 TYR A 68 VAL A 79 1 12 HELIX 4 4 PRO A 101 LEU A 109 5 9 HELIX 5 5 PRO A 110 ARG A 127 1 18 HELIX 6 6 ASN A 135 PHE A 152 1 18 HELIX 7 7 PHE A 152 ALA A 162 1 11 HELIX 8 8 PRO A 164 MET A 168 5 5 HELIX 9 9 ASP A 181 ASN A 192 1 12 HELIX 10 10 THR A 212 LEU A 223 1 12 HELIX 11 11 PRO A 224 GLU A 226 5 3 HELIX 12 12 SER A 232 PHE A 234 5 3 HELIX 13 13 PRO A 264 MET A 271 1 8 HELIX 14 14 GLY A 279 ASP A 281 5 3 HELIX 15 15 GLU A 282 MET A 290 1 9 HELIX 16 16 PRO A 307 LYS A 311 5 5 HELIX 17 17 PHE A 331 TYR A 334 5 4 HELIX 18 18 SER A 335 VAL A 339 5 5 HELIX 19 19 THR A 362 SER A 374 1 13 HELIX 20 20 GLY A 401 ARG A 416 1 16 HELIX 21 21 ARG A 428 GLY A 432 5 5 HELIX 22 22 ASN A 433 LEU A 449 1 17 HELIX 23 23 GLU A 455 ASN A 460 1 6 HELIX 24 24 ASN A 460 ASN A 465 1 6 HELIX 25 25 GLY B 15 LEU B 28 1 14 HELIX 26 26 GLY B 43 SER B 46 5 4 HELIX 27 27 TYR B 68 VAL B 79 1 12 HELIX 28 28 PRO B 101 LEU B 109 5 9 HELIX 29 29 PRO B 110 ARG B 127 1 18 HELIX 30 30 ASN B 135 PHE B 152 1 18 HELIX 31 31 PHE B 152 ALA B 162 1 11 HELIX 32 32 PRO B 164 MET B 168 5 5 HELIX 33 33 ASP B 181 ASN B 192 1 12 HELIX 34 34 THR B 212 LEU B 223 1 12 HELIX 35 35 PRO B 224 GLU B 226 5 3 HELIX 36 36 PRO B 264 MET B 271 1 8 HELIX 37 37 GLY B 279 ASP B 281 5 3 HELIX 38 38 GLU B 282 MET B 290 1 9 HELIX 39 39 PRO B 307 LYS B 311 5 5 HELIX 40 40 PHE B 331 TYR B 334 5 4 HELIX 41 41 SER B 335 VAL B 339 5 5 HELIX 42 42 THR B 362 SER B 374 1 13 HELIX 43 43 GLY B 401 ARG B 416 1 16 HELIX 44 44 ARG B 428 GLY B 432 5 5 HELIX 45 45 ASN B 433 LEU B 449 1 17 HELIX 46 46 GLU B 455 ASN B 460 1 6 HELIX 47 47 ASN B 460 ASN B 465 1 6 SHEET 1 A 5 LEU A 228 PHE A 230 0 SHEET 2 A 5 TRP A 33 GLU A 37 1 N GLU A 37 O THR A 229 SHEET 3 A 5 ILE A 9 ILE A 12 1 N ILE A 11 O TYR A 36 SHEET 4 A 5 TYR A 258 SER A 261 1 O ILE A 260 N VAL A 10 SHEET 5 A 5 ILE A 418 SER A 420 1 O TYR A 419 N LEU A 259 SHEET 1 B 2 SER A 48 LEU A 50 0 SHEET 2 B 2 THR A 56 ASP A 58 -1 O TRP A 57 N PHE A 49 SHEET 1 C 2 TRP A 82 GLN A 86 0 SHEET 2 C 2 THR A 203 PRO A 207 -1 O PHE A 204 N LEU A 85 SHEET 1 D 7 ARG A 96 PRO A 99 0 SHEET 2 D 7 TRP A 90 VAL A 93 -1 N VAL A 91 O VAL A 98 SHEET 3 D 7 TRP A 315 TYR A 317 1 O TYR A 317 N TRP A 92 SHEET 4 D 7 ARG A 327 THR A 329 -1 O ALA A 328 N LEU A 316 SHEET 5 D 7 HIS A 343 GLU A 352 -1 O MET A 347 N THR A 329 SHEET 6 D 7 TYR A 292 LYS A 303 -1 N ILE A 298 O LEU A 348 SHEET 7 D 7 LEU A 383 PRO A 396 -1 O VAL A 384 N GLY A 301 SHEET 1 E 4 VAL A 253 SER A 255 0 SHEET 2 E 4 THR A 245 PHE A 248 -1 N ILE A 246 O VAL A 254 SHEET 3 E 4 ALA A 236 ASP A 240 -1 N ALA A 238 O THR A 247 SHEET 4 E 4 THR A 272 LYS A 273 1 O LYS A 273 N ILE A 239 SHEET 1 F 5 LEU B 228 PHE B 230 0 SHEET 2 F 5 TRP B 33 GLU B 37 1 N GLU B 37 O THR B 229 SHEET 3 F 5 ILE B 9 ILE B 12 1 N ILE B 11 O HIS B 34 SHEET 4 F 5 TYR B 258 SER B 261 1 O ILE B 260 N VAL B 10 SHEET 5 F 5 ILE B 418 SER B 420 1 O TYR B 419 N LEU B 259 SHEET 1 G 2 SER B 48 LEU B 50 0 SHEET 2 G 2 THR B 56 ASP B 58 -1 O TRP B 57 N PHE B 49 SHEET 1 H 2 TRP B 82 GLN B 86 0 SHEET 2 H 2 THR B 203 PRO B 207 -1 O PHE B 206 N ASN B 83 SHEET 1 I 7 ARG B 96 PRO B 99 0 SHEET 2 I 7 TRP B 90 VAL B 93 -1 N VAL B 91 O VAL B 98 SHEET 3 I 7 TRP B 315 TYR B 317 1 O TYR B 317 N TRP B 90 SHEET 4 I 7 ARG B 327 THR B 329 -1 O ALA B 328 N LEU B 316 SHEET 5 I 7 HIS B 343 GLU B 352 -1 O GLU B 349 N ARG B 327 SHEET 6 I 7 TYR B 292 LYS B 303 -1 N SER B 294 O GLU B 352 SHEET 7 I 7 LEU B 383 PRO B 396 -1 O ILE B 391 N THR B 295 SHEET 1 J 4 VAL B 253 SER B 255 0 SHEET 2 J 4 THR B 245 PHE B 248 -1 N ILE B 246 O VAL B 254 SHEET 3 J 4 ALA B 236 ASP B 240 -1 N ALA B 238 O THR B 247 SHEET 4 J 4 THR B 272 LYS B 273 1 O LYS B 273 N ILE B 239 SSBOND 1 CYS A 166 CYS B 166 1555 1555 2.10 CISPEP 1 TYR A 100 PRO A 101 0 -8.31 CISPEP 2 TYR B 100 PRO B 101 0 -5.10 SITE 1 AC1 33 ILE A 12 GLY A 13 GLY A 15 PRO A 16 SITE 2 AC1 33 THR A 17 GLU A 37 CYS A 38 ASN A 39 SITE 3 AC1 33 GLY A 44 LEU A 45 SER A 46 LEU A 59 SITE 4 AC1 33 HIS A 62 VAL A 63 PHE A 234 GLN A 235 SITE 5 AC1 33 ALA A 236 VAL A 263 GLU A 349 GLY A 394 SITE 6 AC1 33 GLY A 422 ARG A 423 GLY A 432 ASN A 433 SITE 7 AC1 33 GLN A 434 SER A 437 HOH A 603 HOH A 607 SITE 8 AC1 33 HOH A 620 HOH A 622 HOH A 681 HOH A 685 SITE 9 AC1 33 HOH A 766 SITE 1 AC2 19 TYR A 100 PRO A 101 PHE A 102 GLN A 103 SITE 2 AC2 19 PHE A 152 MET A 153 ASN A 157 TRP A 161 SITE 3 AC2 19 ARG A 176 TYR A 317 ARG A 327 TYR A 395 SITE 4 AC2 19 TYR A 429 HOH A 619 HOH A 636 HOH A 638 SITE 5 AC2 19 HOH A 639 HOH A 640 HOH A 693 SITE 1 AC3 4 ARG A 270 TYR A 292 HOH A 653 HOH A 686 SITE 1 AC4 31 GLY B 13 GLY B 15 PRO B 16 THR B 17 SITE 2 AC4 31 GLU B 37 CYS B 38 ASN B 39 GLY B 44 SITE 3 AC4 31 LEU B 45 SER B 46 LEU B 59 HIS B 62 SITE 4 AC4 31 VAL B 63 PHE B 234 GLN B 235 ALA B 236 SITE 5 AC4 31 VAL B 263 GLU B 349 GLY B 394 GLY B 422 SITE 6 AC4 31 ARG B 423 GLY B 432 ASN B 433 GLN B 434 SITE 7 AC4 31 SER B 437 HOH B 604 HOH B 608 HOH B 631 SITE 8 AC4 31 HOH B 632 HOH B 635 HOH B 740 SITE 1 AC5 20 TYR B 100 PRO B 101 PHE B 102 GLN B 103 SITE 2 AC5 20 PHE B 152 MET B 153 ASN B 157 TRP B 161 SITE 3 AC5 20 ARG B 176 VAL B 177 TYR B 317 ARG B 327 SITE 4 AC5 20 TYR B 395 TYR B 429 HOH B 605 HOH B 606 SITE 5 AC5 20 HOH B 659 HOH B 660 HOH B 662 HOH B 722 CRYST1 143.393 143.393 354.205 90.00 90.00 120.00 P 65 2 2 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006974 0.004026 0.000000 0.00000 SCALE2 0.000000 0.008053 0.000000 0.00000 SCALE3 0.000000 0.000000 0.002823 0.00000