data_4DST # _entry.id 4DST # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4DST pdb_00004dst 10.2210/pdb4dst/pdb RCSB RCSB070737 ? ? WWPDB D_1000070737 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2012-04-04 2 'Structure model' 1 1 2012-04-18 3 'Structure model' 1 2 2012-06-06 4 'Structure model' 1 3 2024-02-28 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' pdbx_struct_conn_angle 5 4 'Structure model' struct_conn 6 4 'Structure model' struct_ref_seq_dif 7 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 4 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 5 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 6 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 7 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 8 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 9 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_seq_id' 10 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 11 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 12 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 13 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 14 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 15 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 16 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 17 4 'Structure model' '_pdbx_struct_conn_angle.value' 18 4 'Structure model' '_struct_conn.pdbx_dist_value' 19 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 20 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 21 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 22 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 23 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 24 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 25 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 26 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 27 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 28 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 29 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 30 4 'Structure model' '_struct_ref_seq_dif.details' 31 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 32 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 33 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4DST _pdbx_database_status.recvd_initial_deposition_date 2012-02-19 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 4DSN . unspecified PDB 4DSO . unspecified PDB 4DSU . unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Oh, A.' 1 'Maurer, T.' 2 'Garrenton, L.S.' 3 'Pitts, K.' 4 'Anderson, D.J.' 5 'Skelton, N.J.' 6 'Fauber, B.P.' 7 'Pan, B.' 8 'Malek, S.' 9 'Stokoe, D.' 10 'Ludlam, M.' 11 'Bowman, K.K.' 12 'Wu, J.' 13 'Giannetti, A.M.' 14 'Starovasnik, M.A.' 15 'Mellman, I.' 16 'Jackson, P.K.' 17 'Ruldolph, J.' 18 'Fang, G.' 19 'Wang, W.' 20 # _citation.id primary _citation.title 'Small-molecule ligands bind to a distinct pocket in Ras and inhibit SOS-mediated nucleotide exchange activity.' _citation.journal_abbrev Proc.Natl.Acad.Sci.USA _citation.journal_volume 109 _citation.page_first 5299 _citation.page_last 5304 _citation.year 2012 _citation.journal_id_ASTM PNASA6 _citation.country US _citation.journal_id_ISSN 0027-8424 _citation.journal_id_CSD 0040 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 22431598 _citation.pdbx_database_id_DOI 10.1073/pnas.1116510109 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Maurer, T.' 1 ? primary 'Garrenton, L.S.' 2 ? primary 'Oh, A.' 3 ? primary 'Pitts, K.' 4 ? primary 'Anderson, D.J.' 5 ? primary 'Skelton, N.J.' 6 ? primary 'Fauber, B.P.' 7 ? primary 'Pan, B.' 8 ? primary 'Malek, S.' 9 ? primary 'Stokoe, D.' 10 ? primary 'Ludlam, M.J.' 11 ? primary 'Bowman, K.K.' 12 ? primary 'Wu, J.' 13 ? primary 'Giannetti, A.M.' 14 ? primary 'Starovasnik, M.A.' 15 ? primary 'Mellman, I.' 16 ? primary 'Jackson, P.K.' 17 ? primary 'Rudolph, J.' 18 ? primary 'Wang, W.' 19 ? primary 'Fang, G.' 20 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'GTPase KRas, isoform 2B' 21530.574 1 3.6.-.- G12D ? ? 2 non-polymer syn '2-(4,6-dichloro-2-methyl-1H-indol-3-yl)ethanamine' 243.132 1 ? ? ? ? 3 non-polymer syn 'PHOSPHOMETHYLPHOSPHONIC ACID GUANYLATE ESTER' 521.208 1 ? ? ? ? 4 non-polymer syn 'MAGNESIUM ION' 24.305 2 ? ? ? ? 5 non-polymer syn GLYCEROL 92.094 1 ? ? ? ? 6 non-polymer syn 1,2-ETHANEDIOL 62.068 1 ? ? ? ? 7 non-polymer syn 'DIMETHYL SULFOXIDE' 78.133 1 ? ? ? ? 8 non-polymer syn 'ACETATE ION' 59.044 1 ? ? ? ? 9 water nat water 18.015 90 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'KRas 4B, K-Ras 2, Ki-Ras, c-K-ras, c-Ki-ras, GTPase KRas, N-terminally processed' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSTEYKLVVVGADGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFL CVFAINNTKSFEDIHHYREQIKRVKDSEDVPMVLVGNKCDLPSRTVDTKQAQDLARSYGIPFIETSAKTRQGVDDAFYTL VREIRKHKEKMSKDGKKKKKKSKTKCVIM ; _entity_poly.pdbx_seq_one_letter_code_can ;GSTEYKLVVVGADGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFL CVFAINNTKSFEDIHHYREQIKRVKDSEDVPMVLVGNKCDLPSRTVDTKQAQDLARSYGIPFIETSAKTRQGVDDAFYTL VREIRKHKEKMSKDGKKKKKKSKTKCVIM ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 '2-(4,6-dichloro-2-methyl-1H-indol-3-yl)ethanamine' 9LI 3 'PHOSPHOMETHYLPHOSPHONIC ACID GUANYLATE ESTER' GCP 4 'MAGNESIUM ION' MG 5 GLYCEROL GOL 6 1,2-ETHANEDIOL EDO 7 'DIMETHYL SULFOXIDE' DMS 8 'ACETATE ION' ACT 9 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 THR n 1 4 GLU n 1 5 TYR n 1 6 LYS n 1 7 LEU n 1 8 VAL n 1 9 VAL n 1 10 VAL n 1 11 GLY n 1 12 ALA n 1 13 ASP n 1 14 GLY n 1 15 VAL n 1 16 GLY n 1 17 LYS n 1 18 SER n 1 19 ALA n 1 20 LEU n 1 21 THR n 1 22 ILE n 1 23 GLN n 1 24 LEU n 1 25 ILE n 1 26 GLN n 1 27 ASN n 1 28 HIS n 1 29 PHE n 1 30 VAL n 1 31 ASP n 1 32 GLU n 1 33 TYR n 1 34 ASP n 1 35 PRO n 1 36 THR n 1 37 ILE n 1 38 GLU n 1 39 ASP n 1 40 SER n 1 41 TYR n 1 42 ARG n 1 43 LYS n 1 44 GLN n 1 45 VAL n 1 46 VAL n 1 47 ILE n 1 48 ASP n 1 49 GLY n 1 50 GLU n 1 51 THR n 1 52 CYS n 1 53 LEU n 1 54 LEU n 1 55 ASP n 1 56 ILE n 1 57 LEU n 1 58 ASP n 1 59 THR n 1 60 ALA n 1 61 GLY n 1 62 GLN n 1 63 GLU n 1 64 GLU n 1 65 TYR n 1 66 SER n 1 67 ALA n 1 68 MET n 1 69 ARG n 1 70 ASP n 1 71 GLN n 1 72 TYR n 1 73 MET n 1 74 ARG n 1 75 THR n 1 76 GLY n 1 77 GLU n 1 78 GLY n 1 79 PHE n 1 80 LEU n 1 81 CYS n 1 82 VAL n 1 83 PHE n 1 84 ALA n 1 85 ILE n 1 86 ASN n 1 87 ASN n 1 88 THR n 1 89 LYS n 1 90 SER n 1 91 PHE n 1 92 GLU n 1 93 ASP n 1 94 ILE n 1 95 HIS n 1 96 HIS n 1 97 TYR n 1 98 ARG n 1 99 GLU n 1 100 GLN n 1 101 ILE n 1 102 LYS n 1 103 ARG n 1 104 VAL n 1 105 LYS n 1 106 ASP n 1 107 SER n 1 108 GLU n 1 109 ASP n 1 110 VAL n 1 111 PRO n 1 112 MET n 1 113 VAL n 1 114 LEU n 1 115 VAL n 1 116 GLY n 1 117 ASN n 1 118 LYS n 1 119 CYS n 1 120 ASP n 1 121 LEU n 1 122 PRO n 1 123 SER n 1 124 ARG n 1 125 THR n 1 126 VAL n 1 127 ASP n 1 128 THR n 1 129 LYS n 1 130 GLN n 1 131 ALA n 1 132 GLN n 1 133 ASP n 1 134 LEU n 1 135 ALA n 1 136 ARG n 1 137 SER n 1 138 TYR n 1 139 GLY n 1 140 ILE n 1 141 PRO n 1 142 PHE n 1 143 ILE n 1 144 GLU n 1 145 THR n 1 146 SER n 1 147 ALA n 1 148 LYS n 1 149 THR n 1 150 ARG n 1 151 GLN n 1 152 GLY n 1 153 VAL n 1 154 ASP n 1 155 ASP n 1 156 ALA n 1 157 PHE n 1 158 TYR n 1 159 THR n 1 160 LEU n 1 161 VAL n 1 162 ARG n 1 163 GLU n 1 164 ILE n 1 165 ARG n 1 166 LYS n 1 167 HIS n 1 168 LYS n 1 169 GLU n 1 170 LYS n 1 171 MET n 1 172 SER n 1 173 LYS n 1 174 ASP n 1 175 GLY n 1 176 LYS n 1 177 LYS n 1 178 LYS n 1 179 LYS n 1 180 LYS n 1 181 LYS n 1 182 SER n 1 183 LYS n 1 184 THR n 1 185 LYS n 1 186 CYS n 1 187 VAL n 1 188 ILE n 1 189 MET n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'KRAS, KRAS2, RASK2' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 9LI non-polymer . '2-(4,6-dichloro-2-methyl-1H-indol-3-yl)ethanamine' ? 'C11 H12 Cl2 N2' 243.132 ACT non-polymer . 'ACETATE ION' ? 'C2 H3 O2 -1' 59.044 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DMS non-polymer . 'DIMETHYL SULFOXIDE' ? 'C2 H6 O S' 78.133 EDO non-polymer . 1,2-ETHANEDIOL 'ETHYLENE GLYCOL' 'C2 H6 O2' 62.068 GCP non-polymer . 'PHOSPHOMETHYLPHOSPHONIC ACID GUANYLATE ESTER' ? 'C11 H18 N5 O13 P3' 521.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 0 ? ? ? A . n A 1 2 SER 2 1 1 SER SER A . n A 1 3 THR 3 2 2 THR THR A . n A 1 4 GLU 4 3 3 GLU GLU A . n A 1 5 TYR 5 4 4 TYR TYR A . n A 1 6 LYS 6 5 5 LYS LYS A . n A 1 7 LEU 7 6 6 LEU LEU A . n A 1 8 VAL 8 7 7 VAL VAL A . n A 1 9 VAL 9 8 8 VAL VAL A . n A 1 10 VAL 10 9 9 VAL VAL A . n A 1 11 GLY 11 10 10 GLY GLY A . n A 1 12 ALA 12 11 11 ALA ALA A . n A 1 13 ASP 13 12 12 ASP ASP A . n A 1 14 GLY 14 13 13 GLY GLY A . n A 1 15 VAL 15 14 14 VAL VAL A . n A 1 16 GLY 16 15 15 GLY GLY A . n A 1 17 LYS 17 16 16 LYS LYS A . n A 1 18 SER 18 17 17 SER SER A . n A 1 19 ALA 19 18 18 ALA ALA A . n A 1 20 LEU 20 19 19 LEU LEU A . n A 1 21 THR 21 20 20 THR THR A . n A 1 22 ILE 22 21 21 ILE ILE A . n A 1 23 GLN 23 22 22 GLN GLN A . n A 1 24 LEU 24 23 23 LEU LEU A . n A 1 25 ILE 25 24 24 ILE ILE A . n A 1 26 GLN 26 25 25 GLN GLN A . n A 1 27 ASN 27 26 26 ASN ASN A . n A 1 28 HIS 28 27 27 HIS HIS A . n A 1 29 PHE 29 28 28 PHE PHE A . n A 1 30 VAL 30 29 29 VAL VAL A . n A 1 31 ASP 31 30 30 ASP ASP A . n A 1 32 GLU 32 31 31 GLU GLU A . n A 1 33 TYR 33 32 32 TYR TYR A . n A 1 34 ASP 34 33 33 ASP ASP A . n A 1 35 PRO 35 34 34 PRO PRO A . n A 1 36 THR 36 35 35 THR THR A . n A 1 37 ILE 37 36 36 ILE ILE A . n A 1 38 GLU 38 37 37 GLU GLU A . n A 1 39 ASP 39 38 38 ASP ASP A . n A 1 40 SER 40 39 39 SER SER A . n A 1 41 TYR 41 40 40 TYR TYR A . n A 1 42 ARG 42 41 41 ARG ARG A . n A 1 43 LYS 43 42 42 LYS LYS A . n A 1 44 GLN 44 43 43 GLN GLN A . n A 1 45 VAL 45 44 44 VAL VAL A . n A 1 46 VAL 46 45 45 VAL VAL A . n A 1 47 ILE 47 46 46 ILE ILE A . n A 1 48 ASP 48 47 47 ASP ASP A . n A 1 49 GLY 49 48 48 GLY GLY A . n A 1 50 GLU 50 49 49 GLU GLU A . n A 1 51 THR 51 50 50 THR THR A . n A 1 52 CYS 52 51 51 CYS CYS A . n A 1 53 LEU 53 52 52 LEU LEU A . n A 1 54 LEU 54 53 53 LEU LEU A . n A 1 55 ASP 55 54 54 ASP ASP A . n A 1 56 ILE 56 55 55 ILE ILE A . n A 1 57 LEU 57 56 56 LEU LEU A . n A 1 58 ASP 58 57 57 ASP ASP A . n A 1 59 THR 59 58 58 THR THR A . n A 1 60 ALA 60 59 59 ALA ALA A . n A 1 61 GLY 61 60 60 GLY GLY A . n A 1 62 GLN 62 61 61 GLN GLN A . n A 1 63 GLU 63 62 62 GLU GLU A . n A 1 64 GLU 64 63 63 GLU GLU A . n A 1 65 TYR 65 64 64 TYR TYR A . n A 1 66 SER 66 65 65 SER SER A . n A 1 67 ALA 67 66 66 ALA ALA A . n A 1 68 MET 68 67 67 MET MET A . n A 1 69 ARG 69 68 68 ARG ARG A . n A 1 70 ASP 70 69 69 ASP ASP A . n A 1 71 GLN 71 70 70 GLN GLN A . n A 1 72 TYR 72 71 71 TYR TYR A . n A 1 73 MET 73 72 72 MET MET A . n A 1 74 ARG 74 73 73 ARG ARG A . n A 1 75 THR 75 74 74 THR THR A . n A 1 76 GLY 76 75 75 GLY GLY A . n A 1 77 GLU 77 76 76 GLU GLU A . n A 1 78 GLY 78 77 77 GLY GLY A . n A 1 79 PHE 79 78 78 PHE PHE A . n A 1 80 LEU 80 79 79 LEU LEU A . n A 1 81 CYS 81 80 80 CYS CYS A . n A 1 82 VAL 82 81 81 VAL VAL A . n A 1 83 PHE 83 82 82 PHE PHE A . n A 1 84 ALA 84 83 83 ALA ALA A . n A 1 85 ILE 85 84 84 ILE ILE A . n A 1 86 ASN 86 85 85 ASN ASN A . n A 1 87 ASN 87 86 86 ASN ASN A . n A 1 88 THR 88 87 87 THR THR A . n A 1 89 LYS 89 88 88 LYS LYS A . n A 1 90 SER 90 89 89 SER SER A . n A 1 91 PHE 91 90 90 PHE PHE A . n A 1 92 GLU 92 91 91 GLU GLU A . n A 1 93 ASP 93 92 92 ASP ASP A . n A 1 94 ILE 94 93 93 ILE ILE A . n A 1 95 HIS 95 94 94 HIS HIS A . n A 1 96 HIS 96 95 95 HIS HIS A . n A 1 97 TYR 97 96 96 TYR TYR A . n A 1 98 ARG 98 97 97 ARG ARG A . n A 1 99 GLU 99 98 98 GLU GLU A . n A 1 100 GLN 100 99 99 GLN GLN A . n A 1 101 ILE 101 100 100 ILE ILE A . n A 1 102 LYS 102 101 101 LYS LYS A . n A 1 103 ARG 103 102 102 ARG ARG A . n A 1 104 VAL 104 103 103 VAL VAL A . n A 1 105 LYS 105 104 104 LYS LYS A . n A 1 106 ASP 106 105 105 ASP ASP A . n A 1 107 SER 107 106 106 SER SER A . n A 1 108 GLU 108 107 107 GLU GLU A . n A 1 109 ASP 109 108 108 ASP ASP A . n A 1 110 VAL 110 109 109 VAL VAL A . n A 1 111 PRO 111 110 110 PRO PRO A . n A 1 112 MET 112 111 111 MET MET A . n A 1 113 VAL 113 112 112 VAL VAL A . n A 1 114 LEU 114 113 113 LEU LEU A . n A 1 115 VAL 115 114 114 VAL VAL A . n A 1 116 GLY 116 115 115 GLY GLY A . n A 1 117 ASN 117 116 116 ASN ASN A . n A 1 118 LYS 118 117 117 LYS LYS A . n A 1 119 CYS 119 118 118 CYS CYS A . n A 1 120 ASP 120 119 119 ASP ASP A . n A 1 121 LEU 121 120 120 LEU LEU A . n A 1 122 PRO 122 121 121 PRO PRO A . n A 1 123 SER 123 122 122 SER SER A . n A 1 124 ARG 124 123 123 ARG ARG A . n A 1 125 THR 125 124 124 THR THR A . n A 1 126 VAL 126 125 125 VAL VAL A . n A 1 127 ASP 127 126 126 ASP ASP A . n A 1 128 THR 128 127 127 THR THR A . n A 1 129 LYS 129 128 128 LYS LYS A . n A 1 130 GLN 130 129 129 GLN GLN A . n A 1 131 ALA 131 130 130 ALA ALA A . n A 1 132 GLN 132 131 131 GLN GLN A . n A 1 133 ASP 133 132 132 ASP ASP A . n A 1 134 LEU 134 133 133 LEU LEU A . n A 1 135 ALA 135 134 134 ALA ALA A . n A 1 136 ARG 136 135 135 ARG ARG A . n A 1 137 SER 137 136 136 SER SER A . n A 1 138 TYR 138 137 137 TYR TYR A . n A 1 139 GLY 139 138 138 GLY GLY A . n A 1 140 ILE 140 139 139 ILE ILE A . n A 1 141 PRO 141 140 140 PRO PRO A . n A 1 142 PHE 142 141 141 PHE PHE A . n A 1 143 ILE 143 142 142 ILE ILE A . n A 1 144 GLU 144 143 143 GLU GLU A . n A 1 145 THR 145 144 144 THR THR A . n A 1 146 SER 146 145 145 SER SER A . n A 1 147 ALA 147 146 146 ALA ALA A . n A 1 148 LYS 148 147 147 LYS LYS A . n A 1 149 THR 149 148 148 THR THR A . n A 1 150 ARG 150 149 149 ARG ARG A . n A 1 151 GLN 151 150 150 GLN GLN A . n A 1 152 GLY 152 151 151 GLY GLY A . n A 1 153 VAL 153 152 152 VAL VAL A . n A 1 154 ASP 154 153 153 ASP ASP A . n A 1 155 ASP 155 154 154 ASP ASP A . n A 1 156 ALA 156 155 155 ALA ALA A . n A 1 157 PHE 157 156 156 PHE PHE A . n A 1 158 TYR 158 157 157 TYR TYR A . n A 1 159 THR 159 158 158 THR THR A . n A 1 160 LEU 160 159 159 LEU LEU A . n A 1 161 VAL 161 160 160 VAL VAL A . n A 1 162 ARG 162 161 161 ARG ARG A . n A 1 163 GLU 163 162 162 GLU GLU A . n A 1 164 ILE 164 163 163 ILE ILE A . n A 1 165 ARG 165 164 164 ARG ARG A . n A 1 166 LYS 166 165 165 LYS LYS A . n A 1 167 HIS 167 166 166 HIS HIS A . n A 1 168 LYS 168 167 167 LYS LYS A . n A 1 169 GLU 169 168 168 GLU GLU A . n A 1 170 LYS 170 169 169 LYS LYS A . n A 1 171 MET 171 170 170 MET MET A . n A 1 172 SER 172 171 171 SER SER A . n A 1 173 LYS 173 172 172 LYS LYS A . n A 1 174 ASP 174 173 173 ASP ASP A . n A 1 175 GLY 175 174 174 GLY GLY A . n A 1 176 LYS 176 175 175 LYS LYS A . n A 1 177 LYS 177 176 176 LYS LYS A . n A 1 178 LYS 178 177 177 LYS LYS A . n A 1 179 LYS 179 178 178 LYS LYS A . n A 1 180 LYS 180 179 179 LYS LYS A . n A 1 181 LYS 181 180 180 LYS LYS A . n A 1 182 SER 182 181 ? ? ? A . n A 1 183 LYS 183 182 ? ? ? A . n A 1 184 THR 184 183 ? ? ? A . n A 1 185 LYS 185 184 ? ? ? A . n A 1 186 CYS 186 185 ? ? ? A . n A 1 187 VAL 187 186 ? ? ? A . n A 1 188 ILE 188 187 ? ? ? A . n A 1 189 MET 189 188 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 9LI 1 201 1 9LI 9LI A . C 3 GCP 1 202 1 GCP GCP A . D 4 MG 1 203 1 MG MG A . E 5 GOL 1 204 5 GOL GOL A . F 6 EDO 1 205 6 EDO EDO A . G 7 DMS 1 206 7 DMS DMS A . H 8 ACT 1 207 8 ACT ACT A . I 4 MG 1 208 9 MG MG A . J 9 HOH 1 301 1 HOH HOH A . J 9 HOH 2 302 2 HOH HOH A . J 9 HOH 3 303 3 HOH HOH A . J 9 HOH 4 304 4 HOH HOH A . J 9 HOH 5 305 5 HOH HOH A . J 9 HOH 6 306 6 HOH HOH A . J 9 HOH 7 307 7 HOH HOH A . J 9 HOH 8 308 8 HOH HOH A . J 9 HOH 9 309 9 HOH HOH A . J 9 HOH 10 310 10 HOH HOH A . J 9 HOH 11 311 11 HOH HOH A . J 9 HOH 12 312 12 HOH HOH A . J 9 HOH 13 313 14 HOH HOH A . J 9 HOH 14 314 15 HOH HOH A . J 9 HOH 15 315 16 HOH HOH A . J 9 HOH 16 316 17 HOH HOH A . J 9 HOH 17 317 18 HOH HOH A . J 9 HOH 18 318 19 HOH HOH A . J 9 HOH 19 319 20 HOH HOH A . J 9 HOH 20 320 21 HOH HOH A . J 9 HOH 21 321 22 HOH HOH A . J 9 HOH 22 322 23 HOH HOH A . J 9 HOH 23 323 24 HOH HOH A . J 9 HOH 24 324 25 HOH HOH A . J 9 HOH 25 325 26 HOH HOH A . J 9 HOH 26 326 27 HOH HOH A . J 9 HOH 27 327 28 HOH HOH A . J 9 HOH 28 328 29 HOH HOH A . J 9 HOH 29 329 30 HOH HOH A . J 9 HOH 30 330 31 HOH HOH A . J 9 HOH 31 331 32 HOH HOH A . J 9 HOH 32 332 33 HOH HOH A . J 9 HOH 33 333 34 HOH HOH A . J 9 HOH 34 334 35 HOH HOH A . J 9 HOH 35 335 36 HOH HOH A . J 9 HOH 36 336 37 HOH HOH A . J 9 HOH 37 337 38 HOH HOH A . J 9 HOH 38 338 39 HOH HOH A . J 9 HOH 39 339 40 HOH HOH A . J 9 HOH 40 340 41 HOH HOH A . J 9 HOH 41 341 42 HOH HOH A . J 9 HOH 42 342 43 HOH HOH A . J 9 HOH 43 343 44 HOH HOH A . J 9 HOH 44 344 45 HOH HOH A . J 9 HOH 45 345 46 HOH HOH A . J 9 HOH 46 346 47 HOH HOH A . J 9 HOH 47 347 48 HOH HOH A . J 9 HOH 48 348 49 HOH HOH A . J 9 HOH 49 349 50 HOH HOH A . J 9 HOH 50 350 51 HOH HOH A . J 9 HOH 51 351 52 HOH HOH A . J 9 HOH 52 352 53 HOH HOH A . J 9 HOH 53 353 54 HOH HOH A . J 9 HOH 54 354 55 HOH HOH A . J 9 HOH 55 355 56 HOH HOH A . J 9 HOH 56 356 57 HOH HOH A . J 9 HOH 57 357 58 HOH HOH A . J 9 HOH 58 358 59 HOH HOH A . J 9 HOH 59 359 60 HOH HOH A . J 9 HOH 60 360 61 HOH HOH A . J 9 HOH 61 361 62 HOH HOH A . J 9 HOH 62 362 63 HOH HOH A . J 9 HOH 63 363 64 HOH HOH A . J 9 HOH 64 364 65 HOH HOH A . J 9 HOH 65 365 66 HOH HOH A . J 9 HOH 66 366 68 HOH HOH A . J 9 HOH 67 367 69 HOH HOH A . J 9 HOH 68 368 70 HOH HOH A . J 9 HOH 69 369 73 HOH HOH A . J 9 HOH 70 370 75 HOH HOH A . J 9 HOH 71 371 76 HOH HOH A . J 9 HOH 72 372 77 HOH HOH A . J 9 HOH 73 373 78 HOH HOH A . J 9 HOH 74 374 79 HOH HOH A . J 9 HOH 75 375 80 HOH HOH A . J 9 HOH 76 376 82 HOH HOH A . J 9 HOH 77 377 83 HOH HOH A . J 9 HOH 78 378 84 HOH HOH A . J 9 HOH 79 379 85 HOH HOH A . J 9 HOH 80 380 86 HOH HOH A . J 9 HOH 81 381 87 HOH HOH A . J 9 HOH 82 382 88 HOH HOH A . J 9 HOH 83 383 89 HOH HOH A . J 9 HOH 84 384 90 HOH HOH A . J 9 HOH 85 385 91 HOH HOH A . J 9 HOH 86 386 92 HOH HOH A . J 9 HOH 87 387 93 HOH HOH A . J 9 HOH 88 388 94 HOH HOH A . J 9 HOH 89 389 95 HOH HOH A . J 9 HOH 90 390 96 HOH HOH A . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 175 ? CG ? A LYS 176 CG 2 1 Y 1 A LYS 175 ? CD ? A LYS 176 CD 3 1 Y 1 A LYS 175 ? CE ? A LYS 176 CE 4 1 Y 1 A LYS 175 ? NZ ? A LYS 176 NZ 5 1 Y 1 A LYS 176 ? CG ? A LYS 177 CG 6 1 Y 1 A LYS 176 ? CD ? A LYS 177 CD 7 1 Y 1 A LYS 176 ? CE ? A LYS 177 CE 8 1 Y 1 A LYS 176 ? NZ ? A LYS 177 NZ 9 1 Y 1 A LYS 177 ? CG ? A LYS 178 CG 10 1 Y 1 A LYS 177 ? CD ? A LYS 178 CD 11 1 Y 1 A LYS 177 ? CE ? A LYS 178 CE 12 1 Y 1 A LYS 177 ? NZ ? A LYS 178 NZ 13 1 Y 1 A LYS 178 ? CG ? A LYS 179 CG 14 1 Y 1 A LYS 178 ? CD ? A LYS 179 CD 15 1 Y 1 A LYS 178 ? CE ? A LYS 179 CE 16 1 Y 1 A LYS 178 ? NZ ? A LYS 179 NZ 17 1 Y 1 A LYS 179 ? CG ? A LYS 180 CG 18 1 Y 1 A LYS 179 ? CD ? A LYS 180 CD 19 1 Y 1 A LYS 179 ? CE ? A LYS 180 CE 20 1 Y 1 A LYS 179 ? NZ ? A LYS 180 NZ 21 1 Y 1 A LYS 180 ? CG ? A LYS 181 CG 22 1 Y 1 A LYS 180 ? CD ? A LYS 181 CD 23 1 Y 1 A LYS 180 ? CE ? A LYS 181 CE 24 1 Y 1 A LYS 180 ? NZ ? A LYS 181 NZ # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal BOS 'data collection' . ? 1 PHASER phasing . ? 2 PHENIX refinement '(phenix.refine: 1.6.4_486)' ? 3 HKL-2000 'data reduction' . ? 4 SCALEPACK 'data scaling' . ? 5 # _cell.entry_id 4DST _cell.length_a 78.923 _cell.length_b 78.923 _cell.length_c 78.631 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 9 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4DST _symmetry.space_group_name_H-M 'H 3' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 146 _symmetry.space_group_name_Hall ? # _exptl.entry_id 4DST _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.19 _exptl_crystal.density_percent_sol 43.81 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 277 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 8.5 _exptl_crystal_grow.pdbx_details ;0.2 uL + 0.2 uL drops containing 40 mg/mL KRas, 0.1 M TrisCl, 25% polyethylene glycol 4000, 0.2 M NaOAc, 2% benzamidine-HCl, pH 8.5, VAPOR DIFFUSION, SITTING DROP, temperature 277K ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 93 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.pdbx_collection_date 2010-09-03 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Liquid Nitrogen cooled Dual Crystal' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97740 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ALS BEAMLINE 5.0.2' _diffrn_source.pdbx_synchrotron_site ALS _diffrn_source.pdbx_synchrotron_beamline 5.0.2 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.97740 # _reflns.entry_id 4DST _reflns.observed_criterion_sigma_I 1 _reflns.observed_criterion_sigma_F 1 _reflns.d_resolution_low 30 _reflns.d_resolution_high 2.30 _reflns.number_obs 8242 _reflns.number_all 7788 _reflns.percent_possible_obs 94.5 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.092 _reflns.pdbx_netI_over_sigmaI 18 _reflns.B_iso_Wilson_estimate 35.7 _reflns.pdbx_redundancy 5.2 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.30 _reflns_shell.d_res_low 2.38 _reflns_shell.percent_possible_all 70.8 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value 0.332 _reflns_shell.meanI_over_sigI_obs 3.0 _reflns_shell.pdbx_redundancy 3.3 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 832 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 4DST _refine.ls_number_reflns_obs 7716 _refine.ls_number_reflns_all 8109 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.97 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 25.793 _refine.ls_d_res_high 2.3 _refine.ls_percent_reflns_obs 94.44 _refine.ls_R_factor_obs 0.1617 _refine.ls_R_factor_all 0.162 _refine.ls_R_factor_R_work 0.1592 _refine.ls_R_factor_R_free 0.2087 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.09 _refine.ls_number_reflns_R_free 393 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] -3.5514 _refine.aniso_B[2][2] -3.5514 _refine.aniso_B[3][3] 7.1029 _refine.aniso_B[1][2] -0.0000 _refine.aniso_B[1][3] 0.0000 _refine.aniso_B[2][3] -0.0000 _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol 0.342 _refine.solvent_model_param_bsol 46.259 _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.22 _refine.pdbx_overall_phase_error 19.95 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1417 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 67 _refine_hist.number_atoms_solvent 90 _refine_hist.number_atoms_total 1574 _refine_hist.d_res_high 2.3 _refine_hist.d_res_low 25.793 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id f_bond_d 0.005 ? ? 1520 ? 'X-RAY DIFFRACTION' f_angle_d 1.005 ? ? 2058 ? 'X-RAY DIFFRACTION' f_dihedral_angle_d 14.818 ? ? 567 ? 'X-RAY DIFFRACTION' f_chiral_restr 0.059 ? ? 227 ? 'X-RAY DIFFRACTION' f_plane_restr 0.003 ? ? 263 ? 'X-RAY DIFFRACTION' # loop_ _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.pdbx_refine_id . 2.3 2.38 2186 0.1691 84.00 0.2472 . . 112 . . . . 'X-RAY DIFFRACTION' . 2.6282 3.3102 2567 0.1530 100.00 0.2053 . . 134 . . . . 'X-RAY DIFFRACTION' . 3.3102 25.7941 2570 0.1597 100.00 0.2015 . . 147 . . . . 'X-RAY DIFFRACTION' # _database_PDB_matrix.entry_id 4DST _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 4DST _struct.title 'Small-molecule ligands bind to a distinct pocket in Ras and inhibit SOS-mediated nucleotide exchange activity' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4DST _struct_keywords.pdbx_keywords HYDROLASE _struct_keywords.text 'Small G-protein, Signaling, Hydrolase' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 6 ? G N N 7 ? H N N 8 ? I N N 4 ? J N N 9 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code RASK_HUMAN _struct_ref.pdbx_db_accession P01116 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;TEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCV FAINNTKSFEDIHHYREQIKRVKDSEDVPMVLVGNKCDLPSRTVDTKQAQDLARSYGIPFIETSAKTRQGVDDAFYTLVR EIRKHKEKMSKDGKKKKKKSKTKCVIM ; _struct_ref.pdbx_align_begin 2 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4DST _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 3 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 189 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P01116 _struct_ref_seq.db_align_beg 2 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 188 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 2 _struct_ref_seq.pdbx_auth_seq_align_end 188 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4DST GLY A 1 ? UNP P01116 ? ? 'expression tag' 0 1 1 4DST SER A 2 ? UNP P01116 ? ? 'expression tag' 1 2 1 4DST ASP A 13 ? UNP P01116 GLY 12 'engineered mutation' 12 3 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLY A 16 ? ASN A 27 ? GLY A 15 ASN A 26 1 ? 12 HELX_P HELX_P2 2 TYR A 65 ? GLY A 76 ? TYR A 64 GLY A 75 1 ? 12 HELX_P HELX_P3 3 ASN A 87 ? ASP A 106 ? ASN A 86 ASP A 105 1 ? 20 HELX_P HELX_P4 4 ASP A 127 ? GLY A 139 ? ASP A 126 GLY A 138 1 ? 13 HELX_P HELX_P5 5 GLY A 152 ? ASP A 174 ? GLY A 151 ASP A 173 1 ? 23 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A GLY 11 O ? ? ? 1_555 I MG . MG ? ? A GLY 10 A MG 208 1_555 ? ? ? ? ? ? ? 2.623 ? ? metalc2 metalc ? ? A SER 18 OG ? ? ? 1_555 D MG . MG ? ? A SER 17 A MG 203 1_555 ? ? ? ? ? ? ? 2.282 ? ? metalc3 metalc ? ? A THR 36 OG1 ? ? ? 1_555 D MG . MG ? ? A THR 35 A MG 203 1_555 ? ? ? ? ? ? ? 2.450 ? ? metalc4 metalc ? ? A ALA 60 O ? ? ? 1_555 I MG . MG ? ? A ALA 59 A MG 208 1_555 ? ? ? ? ? ? ? 2.668 ? ? metalc5 metalc ? ? A GLY 61 O ? ? ? 1_555 I MG . MG ? ? A GLY 60 A MG 208 1_555 ? ? ? ? ? ? ? 2.604 ? ? metalc6 metalc ? ? A TYR 97 OH ? ? ? 1_555 I MG . MG ? ? A TYR 96 A MG 208 1_555 ? ? ? ? ? ? ? 2.444 ? ? metalc7 metalc ? ? C GCP . O2B ? ? ? 1_555 D MG . MG ? ? A GCP 202 A MG 203 1_555 ? ? ? ? ? ? ? 2.171 ? ? metalc8 metalc ? ? C GCP . O1G ? ? ? 1_555 D MG . MG ? ? A GCP 202 A MG 203 1_555 ? ? ? ? ? ? ? 2.189 ? ? metalc9 metalc ? ? D MG . MG ? ? ? 1_555 J HOH . O ? ? A MG 203 A HOH 301 1_555 ? ? ? ? ? ? ? 2.341 ? ? metalc10 metalc ? ? D MG . MG ? ? ? 1_555 J HOH . O ? ? A MG 203 A HOH 302 1_555 ? ? ? ? ? ? ? 2.317 ? ? metalc11 metalc ? ? I MG . MG ? ? ? 1_555 J HOH . O ? ? A MG 208 A HOH 305 1_555 ? ? ? ? ? ? ? 2.534 ? ? metalc12 metalc ? ? I MG . MG ? ? ? 1_555 J HOH . O ? ? A MG 208 A HOH 308 1_555 ? ? ? ? ? ? ? 2.535 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O ? A GLY 11 ? A GLY 10 ? 1_555 MG ? I MG . ? A MG 208 ? 1_555 O ? A ALA 60 ? A ALA 59 ? 1_555 101.5 ? 2 O ? A GLY 11 ? A GLY 10 ? 1_555 MG ? I MG . ? A MG 208 ? 1_555 O ? A GLY 61 ? A GLY 60 ? 1_555 89.9 ? 3 O ? A ALA 60 ? A ALA 59 ? 1_555 MG ? I MG . ? A MG 208 ? 1_555 O ? A GLY 61 ? A GLY 60 ? 1_555 83.8 ? 4 O ? A GLY 11 ? A GLY 10 ? 1_555 MG ? I MG . ? A MG 208 ? 1_555 OH ? A TYR 97 ? A TYR 96 ? 1_555 76.3 ? 5 O ? A ALA 60 ? A ALA 59 ? 1_555 MG ? I MG . ? A MG 208 ? 1_555 OH ? A TYR 97 ? A TYR 96 ? 1_555 175.4 ? 6 O ? A GLY 61 ? A GLY 60 ? 1_555 MG ? I MG . ? A MG 208 ? 1_555 OH ? A TYR 97 ? A TYR 96 ? 1_555 92.2 ? 7 O ? A GLY 11 ? A GLY 10 ? 1_555 MG ? I MG . ? A MG 208 ? 1_555 O ? J HOH . ? A HOH 305 ? 1_555 93.5 ? 8 O ? A ALA 60 ? A ALA 59 ? 1_555 MG ? I MG . ? A MG 208 ? 1_555 O ? J HOH . ? A HOH 305 ? 1_555 79.2 ? 9 O ? A GLY 61 ? A GLY 60 ? 1_555 MG ? I MG . ? A MG 208 ? 1_555 O ? J HOH . ? A HOH 305 ? 1_555 163.0 ? 10 OH ? A TYR 97 ? A TYR 96 ? 1_555 MG ? I MG . ? A MG 208 ? 1_555 O ? J HOH . ? A HOH 305 ? 1_555 104.8 ? 11 O ? A GLY 11 ? A GLY 10 ? 1_555 MG ? I MG . ? A MG 208 ? 1_555 O ? J HOH . ? A HOH 308 ? 1_555 166.2 ? 12 O ? A ALA 60 ? A ALA 59 ? 1_555 MG ? I MG . ? A MG 208 ? 1_555 O ? J HOH . ? A HOH 308 ? 1_555 92.3 ? 13 O ? A GLY 61 ? A GLY 60 ? 1_555 MG ? I MG . ? A MG 208 ? 1_555 O ? J HOH . ? A HOH 308 ? 1_555 91.2 ? 14 OH ? A TYR 97 ? A TYR 96 ? 1_555 MG ? I MG . ? A MG 208 ? 1_555 O ? J HOH . ? A HOH 308 ? 1_555 89.9 ? 15 O ? J HOH . ? A HOH 305 ? 1_555 MG ? I MG . ? A MG 208 ? 1_555 O ? J HOH . ? A HOH 308 ? 1_555 89.5 ? 16 OG ? A SER 18 ? A SER 17 ? 1_555 MG ? D MG . ? A MG 203 ? 1_555 OG1 ? A THR 36 ? A THR 35 ? 1_555 77.6 ? 17 OG ? A SER 18 ? A SER 17 ? 1_555 MG ? D MG . ? A MG 203 ? 1_555 O2B ? C GCP . ? A GCP 202 ? 1_555 93.8 ? 18 OG1 ? A THR 36 ? A THR 35 ? 1_555 MG ? D MG . ? A MG 203 ? 1_555 O2B ? C GCP . ? A GCP 202 ? 1_555 168.2 ? 19 OG ? A SER 18 ? A SER 17 ? 1_555 MG ? D MG . ? A MG 203 ? 1_555 O1G ? C GCP . ? A GCP 202 ? 1_555 173.1 ? 20 OG1 ? A THR 36 ? A THR 35 ? 1_555 MG ? D MG . ? A MG 203 ? 1_555 O1G ? C GCP . ? A GCP 202 ? 1_555 95.8 ? 21 O2B ? C GCP . ? A GCP 202 ? 1_555 MG ? D MG . ? A MG 203 ? 1_555 O1G ? C GCP . ? A GCP 202 ? 1_555 92.5 ? 22 OG ? A SER 18 ? A SER 17 ? 1_555 MG ? D MG . ? A MG 203 ? 1_555 O ? J HOH . ? A HOH 301 ? 1_555 95.8 ? 23 OG1 ? A THR 36 ? A THR 35 ? 1_555 MG ? D MG . ? A MG 203 ? 1_555 O ? J HOH . ? A HOH 301 ? 1_555 87.4 ? 24 O2B ? C GCP . ? A GCP 202 ? 1_555 MG ? D MG . ? A MG 203 ? 1_555 O ? J HOH . ? A HOH 301 ? 1_555 101.7 ? 25 O1G ? C GCP . ? A GCP 202 ? 1_555 MG ? D MG . ? A MG 203 ? 1_555 O ? J HOH . ? A HOH 301 ? 1_555 85.6 ? 26 OG ? A SER 18 ? A SER 17 ? 1_555 MG ? D MG . ? A MG 203 ? 1_555 O ? J HOH . ? A HOH 302 ? 1_555 79.5 ? 27 OG1 ? A THR 36 ? A THR 35 ? 1_555 MG ? D MG . ? A MG 203 ? 1_555 O ? J HOH . ? A HOH 302 ? 1_555 84.2 ? 28 O2B ? C GCP . ? A GCP 202 ? 1_555 MG ? D MG . ? A MG 203 ? 1_555 O ? J HOH . ? A HOH 302 ? 1_555 86.3 ? 29 O1G ? C GCP . ? A GCP 202 ? 1_555 MG ? D MG . ? A MG 203 ? 1_555 O ? J HOH . ? A HOH 302 ? 1_555 98.2 ? 30 O ? J HOH . ? A HOH 301 ? 1_555 MG ? D MG . ? A MG 203 ? 1_555 O ? J HOH . ? A HOH 302 ? 1_555 171.0 ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 ASP 174 A . ? ASP 173 A GLY 175 A ? GLY 174 A 1 -0.44 2 LYS 178 A . ? LYS 177 A LYS 179 A ? LYS 178 A 1 1.72 # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 6 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? parallel A 3 4 ? parallel A 4 5 ? parallel A 5 6 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLU A 38 ? ILE A 47 ? GLU A 37 ILE A 46 A 2 GLU A 50 ? THR A 59 ? GLU A 49 THR A 58 A 3 THR A 3 ? GLY A 11 ? THR A 2 GLY A 10 A 4 GLY A 78 ? ALA A 84 ? GLY A 77 ALA A 83 A 5 MET A 112 ? ASN A 117 ? MET A 111 ASN A 116 A 6 PHE A 142 ? GLU A 144 ? PHE A 141 GLU A 143 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N VAL A 45 ? N VAL A 44 O CYS A 52 ? O CYS A 51 A 2 3 O ASP A 55 ? O ASP A 54 N TYR A 5 ? N TYR A 4 A 3 4 N VAL A 10 ? N VAL A 9 O VAL A 82 ? O VAL A 81 A 4 5 N PHE A 83 ? N PHE A 82 O ASN A 117 ? O ASN A 116 A 5 6 N LEU A 114 ? N LEU A 113 O ILE A 143 ? O ILE A 142 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A 9LI 201 ? 11 'BINDING SITE FOR RESIDUE 9LI A 201' AC2 Software A GCP 202 ? 27 'BINDING SITE FOR RESIDUE GCP A 202' AC3 Software A MG 203 ? 5 'BINDING SITE FOR RESIDUE MG A 203' AC4 Software A GOL 204 ? 3 'BINDING SITE FOR RESIDUE GOL A 204' AC5 Software A EDO 205 ? 4 'BINDING SITE FOR RESIDUE EDO A 205' AC6 Software A DMS 206 ? 5 'BINDING SITE FOR RESIDUE DMS A 206' AC7 Software A ACT 207 ? 3 'BINDING SITE FOR RESIDUE ACT A 207' AC8 Software A MG 208 ? 6 'BINDING SITE FOR RESIDUE MG A 208' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 11 LYS A 6 ? LYS A 5 . ? 1_555 ? 2 AC1 11 VAL A 8 ? VAL A 7 . ? 1_555 ? 3 AC1 11 SER A 40 ? SER A 39 . ? 1_555 ? 4 AC1 11 LEU A 57 ? LEU A 56 . ? 1_555 ? 5 AC1 11 THR A 75 ? THR A 74 . ? 1_555 ? 6 AC1 11 GLY A 76 ? GLY A 75 . ? 1_555 ? 7 AC1 11 CYS A 119 ? CYS A 118 . ? 6_555 ? 8 AC1 11 ASP A 120 ? ASP A 119 . ? 6_555 ? 9 AC1 11 LEU A 121 ? LEU A 120 . ? 6_555 ? 10 AC1 11 ARG A 124 ? ARG A 123 . ? 6_555 ? 11 AC1 11 HOH J . ? HOH A 376 . ? 1_555 ? 12 AC2 27 ASP A 13 ? ASP A 12 . ? 1_555 ? 13 AC2 27 GLY A 14 ? GLY A 13 . ? 1_555 ? 14 AC2 27 VAL A 15 ? VAL A 14 . ? 1_555 ? 15 AC2 27 GLY A 16 ? GLY A 15 . ? 1_555 ? 16 AC2 27 LYS A 17 ? LYS A 16 . ? 1_555 ? 17 AC2 27 SER A 18 ? SER A 17 . ? 1_555 ? 18 AC2 27 ALA A 19 ? ALA A 18 . ? 1_555 ? 19 AC2 27 PHE A 29 ? PHE A 28 . ? 1_555 ? 20 AC2 27 VAL A 30 ? VAL A 29 . ? 1_555 ? 21 AC2 27 ASP A 31 ? ASP A 30 . ? 1_555 ? 22 AC2 27 GLU A 32 ? GLU A 31 . ? 1_555 ? 23 AC2 27 TYR A 33 ? TYR A 32 . ? 1_555 ? 24 AC2 27 PRO A 35 ? PRO A 34 . ? 1_555 ? 25 AC2 27 THR A 36 ? THR A 35 . ? 1_555 ? 26 AC2 27 GLY A 61 ? GLY A 60 . ? 1_555 ? 27 AC2 27 ASN A 117 ? ASN A 116 . ? 1_555 ? 28 AC2 27 LYS A 118 ? LYS A 117 . ? 1_555 ? 29 AC2 27 ASP A 120 ? ASP A 119 . ? 1_555 ? 30 AC2 27 LEU A 121 ? LEU A 120 . ? 1_555 ? 31 AC2 27 SER A 146 ? SER A 145 . ? 1_555 ? 32 AC2 27 ALA A 147 ? ALA A 146 . ? 1_555 ? 33 AC2 27 MG D . ? MG A 203 . ? 1_555 ? 34 AC2 27 HOH J . ? HOH A 301 . ? 1_555 ? 35 AC2 27 HOH J . ? HOH A 302 . ? 1_555 ? 36 AC2 27 HOH J . ? HOH A 303 . ? 1_555 ? 37 AC2 27 HOH J . ? HOH A 310 . ? 1_555 ? 38 AC2 27 HOH J . ? HOH A 342 . ? 1_555 ? 39 AC3 5 SER A 18 ? SER A 17 . ? 1_555 ? 40 AC3 5 THR A 36 ? THR A 35 . ? 1_555 ? 41 AC3 5 GCP C . ? GCP A 202 . ? 1_555 ? 42 AC3 5 HOH J . ? HOH A 301 . ? 1_555 ? 43 AC3 5 HOH J . ? HOH A 302 . ? 1_555 ? 44 AC4 3 ASP A 93 ? ASP A 92 . ? 1_555 ? 45 AC4 3 TYR A 97 ? TYR A 96 . ? 1_555 ? 46 AC4 3 GLN A 100 ? GLN A 99 . ? 1_555 ? 47 AC5 4 LYS A 102 ? LYS A 101 . ? 1_555 ? 48 AC5 4 ARG A 103 ? ARG A 102 . ? 1_555 ? 49 AC5 4 ASP A 106 ? ASP A 105 . ? 1_555 ? 50 AC5 4 SER A 107 ? SER A 106 . ? 1_555 ? 51 AC6 5 ASP A 34 ? ASP A 33 . ? 1_555 ? 52 AC6 5 ILE A 37 ? ILE A 36 . ? 1_555 ? 53 AC6 5 GLU A 38 ? GLU A 37 . ? 1_555 ? 54 AC6 5 ASP A 39 ? ASP A 38 . ? 1_555 ? 55 AC6 5 HOH J . ? HOH A 339 . ? 6_555 ? 56 AC7 3 ARG A 98 ? ARG A 97 . ? 1_555 ? 57 AC7 3 VAL A 110 ? VAL A 109 . ? 1_555 ? 58 AC7 3 GLY A 139 ? GLY A 138 . ? 1_555 ? 59 AC8 6 GLY A 11 ? GLY A 10 . ? 1_555 ? 60 AC8 6 ALA A 60 ? ALA A 59 . ? 1_555 ? 61 AC8 6 GLY A 61 ? GLY A 60 . ? 1_555 ? 62 AC8 6 TYR A 97 ? TYR A 96 . ? 1_555 ? 63 AC8 6 HOH J . ? HOH A 305 . ? 1_555 ? 64 AC8 6 HOH J . ? HOH A 308 . ? 1_555 ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ILE A 36 ? ? -92.11 -62.88 2 1 GLU A 37 ? ? -171.00 136.96 3 1 SER A 122 ? ? -85.85 33.71 4 1 ARG A 149 ? ? 80.40 7.62 5 1 LYS A 176 ? ? -100.90 47.69 6 1 LYS A 177 ? ? 166.72 -110.27 7 1 LYS A 178 ? ? -146.48 -20.90 8 1 LYS A 179 ? ? 127.22 111.62 # _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x 18.7262 _pdbx_refine_tls.origin_y 9.8187 _pdbx_refine_tls.origin_z 0.2962 _pdbx_refine_tls.T[1][1] 0.1244 _pdbx_refine_tls.T[2][2] 0.1504 _pdbx_refine_tls.T[3][3] 0.1346 _pdbx_refine_tls.T[1][2] -0.0101 _pdbx_refine_tls.T[1][3] -0.0095 _pdbx_refine_tls.T[2][3] -0.0133 _pdbx_refine_tls.L[1][1] 1.2115 _pdbx_refine_tls.L[2][2] 0.9535 _pdbx_refine_tls.L[3][3] 1.1451 _pdbx_refine_tls.L[1][2] 0.1333 _pdbx_refine_tls.L[1][3] 0.2607 _pdbx_refine_tls.L[2][3] -0.5664 _pdbx_refine_tls.S[1][1] -0.0648 _pdbx_refine_tls.S[1][2] -0.0179 _pdbx_refine_tls.S[1][3] 0.1087 _pdbx_refine_tls.S[2][1] 0.0390 _pdbx_refine_tls.S[2][2] -0.0849 _pdbx_refine_tls.S[2][3] -0.0407 _pdbx_refine_tls.S[3][1] -0.0642 _pdbx_refine_tls.S[3][2] 0.1230 _pdbx_refine_tls.S[3][3] 0.0000 # _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_auth_asym_id ? _pdbx_refine_tls_group.beg_auth_seq_id ? _pdbx_refine_tls_group.beg_label_asym_id ? _pdbx_refine_tls_group.beg_label_seq_id ? _pdbx_refine_tls_group.end_auth_asym_id ? _pdbx_refine_tls_group.end_auth_seq_id ? _pdbx_refine_tls_group.end_label_asym_id ? _pdbx_refine_tls_group.end_label_seq_id ? _pdbx_refine_tls_group.selection ? _pdbx_refine_tls_group.selection_details ALL # _pdbx_entry_details.entry_id 4DST _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details 'THE SEQUENCE MATCHES UNIPROT ENTRY P01116, ISOFORM 2B WITH IDENTIFIER P01116-2.' _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest ? # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 0 ? A GLY 1 2 1 Y 1 A SER 181 ? A SER 182 3 1 Y 1 A LYS 182 ? A LYS 183 4 1 Y 1 A THR 183 ? A THR 184 5 1 Y 1 A LYS 184 ? A LYS 185 6 1 Y 1 A CYS 185 ? A CYS 186 7 1 Y 1 A VAL 186 ? A VAL 187 8 1 Y 1 A ILE 187 ? A ILE 188 9 1 Y 1 A MET 188 ? A MET 189 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 9LI C1 C N N 1 9LI CL1 CL N N 2 9LI C2 C Y N 3 9LI CL2 CL N N 4 9LI C3 C Y N 5 9LI C4 C Y N 6 9LI C5 C Y N 7 9LI N6 N Y N 8 9LI C8 C Y N 9 9LI C9 C Y N 10 9LI C10 C Y N 11 9LI C11 C Y N 12 9LI C14 C N N 13 9LI C15 C N N 14 9LI N16 N N N 15 9LI H1 H N N 16 9LI H1A H N N 17 9LI H1B H N N 18 9LI H8 H N N 19 9LI H10 H N N 20 9LI H14 H N N 21 9LI H14A H N N 22 9LI H15 H N N 23 9LI H15A H N N 24 9LI HN16 H N N 25 9LI HN1A H N N 26 9LI HN6 H N N 27 ACT C C N N 28 ACT O O N N 29 ACT OXT O N N 30 ACT CH3 C N N 31 ACT H1 H N N 32 ACT H2 H N N 33 ACT H3 H N N 34 ALA N N N N 35 ALA CA C N S 36 ALA C C N N 37 ALA O O N N 38 ALA CB C N N 39 ALA OXT O N N 40 ALA H H N N 41 ALA H2 H N N 42 ALA HA H N N 43 ALA HB1 H N N 44 ALA HB2 H N N 45 ALA HB3 H N N 46 ALA HXT H N N 47 ARG N N N N 48 ARG CA C N S 49 ARG C C N N 50 ARG O O N N 51 ARG CB C N N 52 ARG CG C N N 53 ARG CD C N N 54 ARG NE N N N 55 ARG CZ C N N 56 ARG NH1 N N N 57 ARG NH2 N N N 58 ARG OXT O N N 59 ARG H H N N 60 ARG H2 H N N 61 ARG HA H N N 62 ARG HB2 H N N 63 ARG HB3 H N N 64 ARG HG2 H N N 65 ARG HG3 H N N 66 ARG HD2 H N N 67 ARG HD3 H N N 68 ARG HE H N N 69 ARG HH11 H N N 70 ARG HH12 H N N 71 ARG HH21 H N N 72 ARG HH22 H N N 73 ARG HXT H N N 74 ASN N N N N 75 ASN CA C N S 76 ASN C C N N 77 ASN O O N N 78 ASN CB C N N 79 ASN CG C N N 80 ASN OD1 O N N 81 ASN ND2 N N N 82 ASN OXT O N N 83 ASN H H N N 84 ASN H2 H N N 85 ASN HA H N N 86 ASN HB2 H N N 87 ASN HB3 H N N 88 ASN HD21 H N N 89 ASN HD22 H N N 90 ASN HXT H N N 91 ASP N N N N 92 ASP CA C N S 93 ASP C C N N 94 ASP O O N N 95 ASP CB C N N 96 ASP CG C N N 97 ASP OD1 O N N 98 ASP OD2 O N N 99 ASP OXT O N N 100 ASP H H N N 101 ASP H2 H N N 102 ASP HA H N N 103 ASP HB2 H N N 104 ASP HB3 H N N 105 ASP HD2 H N N 106 ASP HXT H N N 107 CYS N N N N 108 CYS CA C N R 109 CYS C C N N 110 CYS O O N N 111 CYS CB C N N 112 CYS SG S N N 113 CYS OXT O N N 114 CYS H H N N 115 CYS H2 H N N 116 CYS HA H N N 117 CYS HB2 H N N 118 CYS HB3 H N N 119 CYS HG H N N 120 CYS HXT H N N 121 DMS S S N N 122 DMS O O N N 123 DMS C1 C N N 124 DMS C2 C N N 125 DMS H11 H N N 126 DMS H12 H N N 127 DMS H13 H N N 128 DMS H21 H N N 129 DMS H22 H N N 130 DMS H23 H N N 131 EDO C1 C N N 132 EDO O1 O N N 133 EDO C2 C N N 134 EDO O2 O N N 135 EDO H11 H N N 136 EDO H12 H N N 137 EDO HO1 H N N 138 EDO H21 H N N 139 EDO H22 H N N 140 EDO HO2 H N N 141 GCP PG P N N 142 GCP O1G O N N 143 GCP O2G O N N 144 GCP O3G O N N 145 GCP C3B C N N 146 GCP PB P N R 147 GCP O1B O N N 148 GCP O2B O N N 149 GCP O3A O N N 150 GCP PA P N S 151 GCP O1A O N N 152 GCP O2A O N N 153 GCP "O5'" O N N 154 GCP "C5'" C N N 155 GCP "C4'" C N R 156 GCP "O4'" O N N 157 GCP "C3'" C N S 158 GCP "O3'" O N N 159 GCP "C2'" C N R 160 GCP "O2'" O N N 161 GCP "C1'" C N R 162 GCP N9 N Y N 163 GCP C8 C Y N 164 GCP N7 N Y N 165 GCP C5 C Y N 166 GCP C6 C Y N 167 GCP O6 O N N 168 GCP N1 N Y N 169 GCP C2 C Y N 170 GCP N2 N N N 171 GCP N3 N Y N 172 GCP C4 C Y N 173 GCP HOG2 H N N 174 GCP HOG3 H N N 175 GCP H3B1 H N N 176 GCP H3B2 H N N 177 GCP HOB2 H N N 178 GCP HOA2 H N N 179 GCP "H5'2" H N N 180 GCP "H5'1" H N N 181 GCP "H4'" H N N 182 GCP "H3'" H N N 183 GCP "HO3'" H N N 184 GCP "H2'" H N N 185 GCP "HO2'" H N N 186 GCP "H1'" H N N 187 GCP H8 H N N 188 GCP HN1 H N N 189 GCP HN21 H N N 190 GCP HN22 H N N 191 GLN N N N N 192 GLN CA C N S 193 GLN C C N N 194 GLN O O N N 195 GLN CB C N N 196 GLN CG C N N 197 GLN CD C N N 198 GLN OE1 O N N 199 GLN NE2 N N N 200 GLN OXT O N N 201 GLN H H N N 202 GLN H2 H N N 203 GLN HA H N N 204 GLN HB2 H N N 205 GLN HB3 H N N 206 GLN HG2 H N N 207 GLN HG3 H N N 208 GLN HE21 H N N 209 GLN HE22 H N N 210 GLN HXT H N N 211 GLU N N N N 212 GLU CA C N S 213 GLU C C N N 214 GLU O O N N 215 GLU CB C N N 216 GLU CG C N N 217 GLU CD C N N 218 GLU OE1 O N N 219 GLU OE2 O N N 220 GLU OXT O N N 221 GLU H H N N 222 GLU H2 H N N 223 GLU HA H N N 224 GLU HB2 H N N 225 GLU HB3 H N N 226 GLU HG2 H N N 227 GLU HG3 H N N 228 GLU HE2 H N N 229 GLU HXT H N N 230 GLY N N N N 231 GLY CA C N N 232 GLY C C N N 233 GLY O O N N 234 GLY OXT O N N 235 GLY H H N N 236 GLY H2 H N N 237 GLY HA2 H N N 238 GLY HA3 H N N 239 GLY HXT H N N 240 GOL C1 C N N 241 GOL O1 O N N 242 GOL C2 C N N 243 GOL O2 O N N 244 GOL C3 C N N 245 GOL O3 O N N 246 GOL H11 H N N 247 GOL H12 H N N 248 GOL HO1 H N N 249 GOL H2 H N N 250 GOL HO2 H N N 251 GOL H31 H N N 252 GOL H32 H N N 253 GOL HO3 H N N 254 HIS N N N N 255 HIS CA C N S 256 HIS C C N N 257 HIS O O N N 258 HIS CB C N N 259 HIS CG C Y N 260 HIS ND1 N Y N 261 HIS CD2 C Y N 262 HIS CE1 C Y N 263 HIS NE2 N Y N 264 HIS OXT O N N 265 HIS H H N N 266 HIS H2 H N N 267 HIS HA H N N 268 HIS HB2 H N N 269 HIS HB3 H N N 270 HIS HD1 H N N 271 HIS HD2 H N N 272 HIS HE1 H N N 273 HIS HE2 H N N 274 HIS HXT H N N 275 HOH O O N N 276 HOH H1 H N N 277 HOH H2 H N N 278 ILE N N N N 279 ILE CA C N S 280 ILE C C N N 281 ILE O O N N 282 ILE CB C N S 283 ILE CG1 C N N 284 ILE CG2 C N N 285 ILE CD1 C N N 286 ILE OXT O N N 287 ILE H H N N 288 ILE H2 H N N 289 ILE HA H N N 290 ILE HB H N N 291 ILE HG12 H N N 292 ILE HG13 H N N 293 ILE HG21 H N N 294 ILE HG22 H N N 295 ILE HG23 H N N 296 ILE HD11 H N N 297 ILE HD12 H N N 298 ILE HD13 H N N 299 ILE HXT H N N 300 LEU N N N N 301 LEU CA C N S 302 LEU C C N N 303 LEU O O N N 304 LEU CB C N N 305 LEU CG C N N 306 LEU CD1 C N N 307 LEU CD2 C N N 308 LEU OXT O N N 309 LEU H H N N 310 LEU H2 H N N 311 LEU HA H N N 312 LEU HB2 H N N 313 LEU HB3 H N N 314 LEU HG H N N 315 LEU HD11 H N N 316 LEU HD12 H N N 317 LEU HD13 H N N 318 LEU HD21 H N N 319 LEU HD22 H N N 320 LEU HD23 H N N 321 LEU HXT H N N 322 LYS N N N N 323 LYS CA C N S 324 LYS C C N N 325 LYS O O N N 326 LYS CB C N N 327 LYS CG C N N 328 LYS CD C N N 329 LYS CE C N N 330 LYS NZ N N N 331 LYS OXT O N N 332 LYS H H N N 333 LYS H2 H N N 334 LYS HA H N N 335 LYS HB2 H N N 336 LYS HB3 H N N 337 LYS HG2 H N N 338 LYS HG3 H N N 339 LYS HD2 H N N 340 LYS HD3 H N N 341 LYS HE2 H N N 342 LYS HE3 H N N 343 LYS HZ1 H N N 344 LYS HZ2 H N N 345 LYS HZ3 H N N 346 LYS HXT H N N 347 MET N N N N 348 MET CA C N S 349 MET C C N N 350 MET O O N N 351 MET CB C N N 352 MET CG C N N 353 MET SD S N N 354 MET CE C N N 355 MET OXT O N N 356 MET H H N N 357 MET H2 H N N 358 MET HA H N N 359 MET HB2 H N N 360 MET HB3 H N N 361 MET HG2 H N N 362 MET HG3 H N N 363 MET HE1 H N N 364 MET HE2 H N N 365 MET HE3 H N N 366 MET HXT H N N 367 MG MG MG N N 368 PHE N N N N 369 PHE CA C N S 370 PHE C C N N 371 PHE O O N N 372 PHE CB C N N 373 PHE CG C Y N 374 PHE CD1 C Y N 375 PHE CD2 C Y N 376 PHE CE1 C Y N 377 PHE CE2 C Y N 378 PHE CZ C Y N 379 PHE OXT O N N 380 PHE H H N N 381 PHE H2 H N N 382 PHE HA H N N 383 PHE HB2 H N N 384 PHE HB3 H N N 385 PHE HD1 H N N 386 PHE HD2 H N N 387 PHE HE1 H N N 388 PHE HE2 H N N 389 PHE HZ H N N 390 PHE HXT H N N 391 PRO N N N N 392 PRO CA C N S 393 PRO C C N N 394 PRO O O N N 395 PRO CB C N N 396 PRO CG C N N 397 PRO CD C N N 398 PRO OXT O N N 399 PRO H H N N 400 PRO HA H N N 401 PRO HB2 H N N 402 PRO HB3 H N N 403 PRO HG2 H N N 404 PRO HG3 H N N 405 PRO HD2 H N N 406 PRO HD3 H N N 407 PRO HXT H N N 408 SER N N N N 409 SER CA C N S 410 SER C C N N 411 SER O O N N 412 SER CB C N N 413 SER OG O N N 414 SER OXT O N N 415 SER H H N N 416 SER H2 H N N 417 SER HA H N N 418 SER HB2 H N N 419 SER HB3 H N N 420 SER HG H N N 421 SER HXT H N N 422 THR N N N N 423 THR CA C N S 424 THR C C N N 425 THR O O N N 426 THR CB C N R 427 THR OG1 O N N 428 THR CG2 C N N 429 THR OXT O N N 430 THR H H N N 431 THR H2 H N N 432 THR HA H N N 433 THR HB H N N 434 THR HG1 H N N 435 THR HG21 H N N 436 THR HG22 H N N 437 THR HG23 H N N 438 THR HXT H N N 439 TYR N N N N 440 TYR CA C N S 441 TYR C C N N 442 TYR O O N N 443 TYR CB C N N 444 TYR CG C Y N 445 TYR CD1 C Y N 446 TYR CD2 C Y N 447 TYR CE1 C Y N 448 TYR CE2 C Y N 449 TYR CZ C Y N 450 TYR OH O N N 451 TYR OXT O N N 452 TYR H H N N 453 TYR H2 H N N 454 TYR HA H N N 455 TYR HB2 H N N 456 TYR HB3 H N N 457 TYR HD1 H N N 458 TYR HD2 H N N 459 TYR HE1 H N N 460 TYR HE2 H N N 461 TYR HH H N N 462 TYR HXT H N N 463 VAL N N N N 464 VAL CA C N S 465 VAL C C N N 466 VAL O O N N 467 VAL CB C N N 468 VAL CG1 C N N 469 VAL CG2 C N N 470 VAL OXT O N N 471 VAL H H N N 472 VAL H2 H N N 473 VAL HA H N N 474 VAL HB H N N 475 VAL HG11 H N N 476 VAL HG12 H N N 477 VAL HG13 H N N 478 VAL HG21 H N N 479 VAL HG22 H N N 480 VAL HG23 H N N 481 VAL HXT H N N 482 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 9LI C2 C1 sing N N 1 9LI C1 H1 sing N N 2 9LI C1 H1A sing N N 3 9LI C1 H1B sing N N 4 9LI CL1 C11 sing N N 5 9LI C3 C2 doub Y N 6 9LI N6 C2 sing Y N 7 9LI CL2 C9 sing N N 8 9LI C4 C3 sing Y N 9 9LI C3 C14 sing N N 10 9LI C11 C4 doub Y N 11 9LI C4 C5 sing Y N 12 9LI C8 C5 doub Y N 13 9LI C5 N6 sing Y N 14 9LI C9 C8 sing Y N 15 9LI C8 H8 sing N N 16 9LI C10 C9 doub Y N 17 9LI C10 C11 sing Y N 18 9LI C10 H10 sing N N 19 9LI C14 C15 sing N N 20 9LI C14 H14 sing N N 21 9LI C14 H14A sing N N 22 9LI C15 N16 sing N N 23 9LI C15 H15 sing N N 24 9LI C15 H15A sing N N 25 9LI N16 HN16 sing N N 26 9LI N16 HN1A sing N N 27 9LI N6 HN6 sing N N 28 ACT C O doub N N 29 ACT C OXT sing N N 30 ACT C CH3 sing N N 31 ACT CH3 H1 sing N N 32 ACT CH3 H2 sing N N 33 ACT CH3 H3 sing N N 34 ALA N CA sing N N 35 ALA N H sing N N 36 ALA N H2 sing N N 37 ALA CA C sing N N 38 ALA CA CB sing N N 39 ALA CA HA sing N N 40 ALA C O doub N N 41 ALA C OXT sing N N 42 ALA CB HB1 sing N N 43 ALA CB HB2 sing N N 44 ALA CB HB3 sing N N 45 ALA OXT HXT sing N N 46 ARG N CA sing N N 47 ARG N H sing N N 48 ARG N H2 sing N N 49 ARG CA C sing N N 50 ARG CA CB sing N N 51 ARG CA HA sing N N 52 ARG C O doub N N 53 ARG C OXT sing N N 54 ARG CB CG sing N N 55 ARG CB HB2 sing N N 56 ARG CB HB3 sing N N 57 ARG CG CD sing N N 58 ARG CG HG2 sing N N 59 ARG CG HG3 sing N N 60 ARG CD NE sing N N 61 ARG CD HD2 sing N N 62 ARG CD HD3 sing N N 63 ARG NE CZ sing N N 64 ARG NE HE sing N N 65 ARG CZ NH1 sing N N 66 ARG CZ NH2 doub N N 67 ARG NH1 HH11 sing N N 68 ARG NH1 HH12 sing N N 69 ARG NH2 HH21 sing N N 70 ARG NH2 HH22 sing N N 71 ARG OXT HXT sing N N 72 ASN N CA sing N N 73 ASN N H sing N N 74 ASN N H2 sing N N 75 ASN CA C sing N N 76 ASN CA CB sing N N 77 ASN CA HA sing N N 78 ASN C O doub N N 79 ASN C OXT sing N N 80 ASN CB CG sing N N 81 ASN CB HB2 sing N N 82 ASN CB HB3 sing N N 83 ASN CG OD1 doub N N 84 ASN CG ND2 sing N N 85 ASN ND2 HD21 sing N N 86 ASN ND2 HD22 sing N N 87 ASN OXT HXT sing N N 88 ASP N CA sing N N 89 ASP N H sing N N 90 ASP N H2 sing N N 91 ASP CA C sing N N 92 ASP CA CB sing N N 93 ASP CA HA sing N N 94 ASP C O doub N N 95 ASP C OXT sing N N 96 ASP CB CG sing N N 97 ASP CB HB2 sing N N 98 ASP CB HB3 sing N N 99 ASP CG OD1 doub N N 100 ASP CG OD2 sing N N 101 ASP OD2 HD2 sing N N 102 ASP OXT HXT sing N N 103 CYS N CA sing N N 104 CYS N H sing N N 105 CYS N H2 sing N N 106 CYS CA C sing N N 107 CYS CA CB sing N N 108 CYS CA HA sing N N 109 CYS C O doub N N 110 CYS C OXT sing N N 111 CYS CB SG sing N N 112 CYS CB HB2 sing N N 113 CYS CB HB3 sing N N 114 CYS SG HG sing N N 115 CYS OXT HXT sing N N 116 DMS S O doub N N 117 DMS S C1 sing N N 118 DMS S C2 sing N N 119 DMS C1 H11 sing N N 120 DMS C1 H12 sing N N 121 DMS C1 H13 sing N N 122 DMS C2 H21 sing N N 123 DMS C2 H22 sing N N 124 DMS C2 H23 sing N N 125 EDO C1 O1 sing N N 126 EDO C1 C2 sing N N 127 EDO C1 H11 sing N N 128 EDO C1 H12 sing N N 129 EDO O1 HO1 sing N N 130 EDO C2 O2 sing N N 131 EDO C2 H21 sing N N 132 EDO C2 H22 sing N N 133 EDO O2 HO2 sing N N 134 GCP PG O1G doub N N 135 GCP PG O2G sing N N 136 GCP PG O3G sing N N 137 GCP PG C3B sing N N 138 GCP O2G HOG2 sing N N 139 GCP O3G HOG3 sing N N 140 GCP C3B PB sing N N 141 GCP C3B H3B1 sing N N 142 GCP C3B H3B2 sing N N 143 GCP PB O1B doub N N 144 GCP PB O2B sing N N 145 GCP PB O3A sing N N 146 GCP O2B HOB2 sing N N 147 GCP O3A PA sing N N 148 GCP PA O1A doub N N 149 GCP PA O2A sing N N 150 GCP PA "O5'" sing N N 151 GCP O2A HOA2 sing N N 152 GCP "O5'" "C5'" sing N N 153 GCP "C5'" "C4'" sing N N 154 GCP "C5'" "H5'2" sing N N 155 GCP "C5'" "H5'1" sing N N 156 GCP "C4'" "O4'" sing N N 157 GCP "C4'" "C3'" sing N N 158 GCP "C4'" "H4'" sing N N 159 GCP "O4'" "C1'" sing N N 160 GCP "C3'" "O3'" sing N N 161 GCP "C3'" "C2'" sing N N 162 GCP "C3'" "H3'" sing N N 163 GCP "O3'" "HO3'" sing N N 164 GCP "C2'" "O2'" sing N N 165 GCP "C2'" "C1'" sing N N 166 GCP "C2'" "H2'" sing N N 167 GCP "O2'" "HO2'" sing N N 168 GCP "C1'" N9 sing N N 169 GCP "C1'" "H1'" sing N N 170 GCP N9 C8 sing Y N 171 GCP N9 C4 sing Y N 172 GCP C8 N7 doub Y N 173 GCP C8 H8 sing N N 174 GCP N7 C5 sing Y N 175 GCP C5 C6 sing Y N 176 GCP C5 C4 doub Y N 177 GCP C6 O6 doub N N 178 GCP C6 N1 sing Y N 179 GCP N1 C2 sing Y N 180 GCP N1 HN1 sing N N 181 GCP C2 N2 sing N N 182 GCP C2 N3 doub Y N 183 GCP N2 HN21 sing N N 184 GCP N2 HN22 sing N N 185 GCP N3 C4 sing Y N 186 GLN N CA sing N N 187 GLN N H sing N N 188 GLN N H2 sing N N 189 GLN CA C sing N N 190 GLN CA CB sing N N 191 GLN CA HA sing N N 192 GLN C O doub N N 193 GLN C OXT sing N N 194 GLN CB CG sing N N 195 GLN CB HB2 sing N N 196 GLN CB HB3 sing N N 197 GLN CG CD sing N N 198 GLN CG HG2 sing N N 199 GLN CG HG3 sing N N 200 GLN CD OE1 doub N N 201 GLN CD NE2 sing N N 202 GLN NE2 HE21 sing N N 203 GLN NE2 HE22 sing N N 204 GLN OXT HXT sing N N 205 GLU N CA sing N N 206 GLU N H sing N N 207 GLU N H2 sing N N 208 GLU CA C sing N N 209 GLU CA CB sing N N 210 GLU CA HA sing N N 211 GLU C O doub N N 212 GLU C OXT sing N N 213 GLU CB CG sing N N 214 GLU CB HB2 sing N N 215 GLU CB HB3 sing N N 216 GLU CG CD sing N N 217 GLU CG HG2 sing N N 218 GLU CG HG3 sing N N 219 GLU CD OE1 doub N N 220 GLU CD OE2 sing N N 221 GLU OE2 HE2 sing N N 222 GLU OXT HXT sing N N 223 GLY N CA sing N N 224 GLY N H sing N N 225 GLY N H2 sing N N 226 GLY CA C sing N N 227 GLY CA HA2 sing N N 228 GLY CA HA3 sing N N 229 GLY C O doub N N 230 GLY C OXT sing N N 231 GLY OXT HXT sing N N 232 GOL C1 O1 sing N N 233 GOL C1 C2 sing N N 234 GOL C1 H11 sing N N 235 GOL C1 H12 sing N N 236 GOL O1 HO1 sing N N 237 GOL C2 O2 sing N N 238 GOL C2 C3 sing N N 239 GOL C2 H2 sing N N 240 GOL O2 HO2 sing N N 241 GOL C3 O3 sing N N 242 GOL C3 H31 sing N N 243 GOL C3 H32 sing N N 244 GOL O3 HO3 sing N N 245 HIS N CA sing N N 246 HIS N H sing N N 247 HIS N H2 sing N N 248 HIS CA C sing N N 249 HIS CA CB sing N N 250 HIS CA HA sing N N 251 HIS C O doub N N 252 HIS C OXT sing N N 253 HIS CB CG sing N N 254 HIS CB HB2 sing N N 255 HIS CB HB3 sing N N 256 HIS CG ND1 sing Y N 257 HIS CG CD2 doub Y N 258 HIS ND1 CE1 doub Y N 259 HIS ND1 HD1 sing N N 260 HIS CD2 NE2 sing Y N 261 HIS CD2 HD2 sing N N 262 HIS CE1 NE2 sing Y N 263 HIS CE1 HE1 sing N N 264 HIS NE2 HE2 sing N N 265 HIS OXT HXT sing N N 266 HOH O H1 sing N N 267 HOH O H2 sing N N 268 ILE N CA sing N N 269 ILE N H sing N N 270 ILE N H2 sing N N 271 ILE CA C sing N N 272 ILE CA CB sing N N 273 ILE CA HA sing N N 274 ILE C O doub N N 275 ILE C OXT sing N N 276 ILE CB CG1 sing N N 277 ILE CB CG2 sing N N 278 ILE CB HB sing N N 279 ILE CG1 CD1 sing N N 280 ILE CG1 HG12 sing N N 281 ILE CG1 HG13 sing N N 282 ILE CG2 HG21 sing N N 283 ILE CG2 HG22 sing N N 284 ILE CG2 HG23 sing N N 285 ILE CD1 HD11 sing N N 286 ILE CD1 HD12 sing N N 287 ILE CD1 HD13 sing N N 288 ILE OXT HXT sing N N 289 LEU N CA sing N N 290 LEU N H sing N N 291 LEU N H2 sing N N 292 LEU CA C sing N N 293 LEU CA CB sing N N 294 LEU CA HA sing N N 295 LEU C O doub N N 296 LEU C OXT sing N N 297 LEU CB CG sing N N 298 LEU CB HB2 sing N N 299 LEU CB HB3 sing N N 300 LEU CG CD1 sing N N 301 LEU CG CD2 sing N N 302 LEU CG HG sing N N 303 LEU CD1 HD11 sing N N 304 LEU CD1 HD12 sing N N 305 LEU CD1 HD13 sing N N 306 LEU CD2 HD21 sing N N 307 LEU CD2 HD22 sing N N 308 LEU CD2 HD23 sing N N 309 LEU OXT HXT sing N N 310 LYS N CA sing N N 311 LYS N H sing N N 312 LYS N H2 sing N N 313 LYS CA C sing N N 314 LYS CA CB sing N N 315 LYS CA HA sing N N 316 LYS C O doub N N 317 LYS C OXT sing N N 318 LYS CB CG sing N N 319 LYS CB HB2 sing N N 320 LYS CB HB3 sing N N 321 LYS CG CD sing N N 322 LYS CG HG2 sing N N 323 LYS CG HG3 sing N N 324 LYS CD CE sing N N 325 LYS CD HD2 sing N N 326 LYS CD HD3 sing N N 327 LYS CE NZ sing N N 328 LYS CE HE2 sing N N 329 LYS CE HE3 sing N N 330 LYS NZ HZ1 sing N N 331 LYS NZ HZ2 sing N N 332 LYS NZ HZ3 sing N N 333 LYS OXT HXT sing N N 334 MET N CA sing N N 335 MET N H sing N N 336 MET N H2 sing N N 337 MET CA C sing N N 338 MET CA CB sing N N 339 MET CA HA sing N N 340 MET C O doub N N 341 MET C OXT sing N N 342 MET CB CG sing N N 343 MET CB HB2 sing N N 344 MET CB HB3 sing N N 345 MET CG SD sing N N 346 MET CG HG2 sing N N 347 MET CG HG3 sing N N 348 MET SD CE sing N N 349 MET CE HE1 sing N N 350 MET CE HE2 sing N N 351 MET CE HE3 sing N N 352 MET OXT HXT sing N N 353 PHE N CA sing N N 354 PHE N H sing N N 355 PHE N H2 sing N N 356 PHE CA C sing N N 357 PHE CA CB sing N N 358 PHE CA HA sing N N 359 PHE C O doub N N 360 PHE C OXT sing N N 361 PHE CB CG sing N N 362 PHE CB HB2 sing N N 363 PHE CB HB3 sing N N 364 PHE CG CD1 doub Y N 365 PHE CG CD2 sing Y N 366 PHE CD1 CE1 sing Y N 367 PHE CD1 HD1 sing N N 368 PHE CD2 CE2 doub Y N 369 PHE CD2 HD2 sing N N 370 PHE CE1 CZ doub Y N 371 PHE CE1 HE1 sing N N 372 PHE CE2 CZ sing Y N 373 PHE CE2 HE2 sing N N 374 PHE CZ HZ sing N N 375 PHE OXT HXT sing N N 376 PRO N CA sing N N 377 PRO N CD sing N N 378 PRO N H sing N N 379 PRO CA C sing N N 380 PRO CA CB sing N N 381 PRO CA HA sing N N 382 PRO C O doub N N 383 PRO C OXT sing N N 384 PRO CB CG sing N N 385 PRO CB HB2 sing N N 386 PRO CB HB3 sing N N 387 PRO CG CD sing N N 388 PRO CG HG2 sing N N 389 PRO CG HG3 sing N N 390 PRO CD HD2 sing N N 391 PRO CD HD3 sing N N 392 PRO OXT HXT sing N N 393 SER N CA sing N N 394 SER N H sing N N 395 SER N H2 sing N N 396 SER CA C sing N N 397 SER CA CB sing N N 398 SER CA HA sing N N 399 SER C O doub N N 400 SER C OXT sing N N 401 SER CB OG sing N N 402 SER CB HB2 sing N N 403 SER CB HB3 sing N N 404 SER OG HG sing N N 405 SER OXT HXT sing N N 406 THR N CA sing N N 407 THR N H sing N N 408 THR N H2 sing N N 409 THR CA C sing N N 410 THR CA CB sing N N 411 THR CA HA sing N N 412 THR C O doub N N 413 THR C OXT sing N N 414 THR CB OG1 sing N N 415 THR CB CG2 sing N N 416 THR CB HB sing N N 417 THR OG1 HG1 sing N N 418 THR CG2 HG21 sing N N 419 THR CG2 HG22 sing N N 420 THR CG2 HG23 sing N N 421 THR OXT HXT sing N N 422 TYR N CA sing N N 423 TYR N H sing N N 424 TYR N H2 sing N N 425 TYR CA C sing N N 426 TYR CA CB sing N N 427 TYR CA HA sing N N 428 TYR C O doub N N 429 TYR C OXT sing N N 430 TYR CB CG sing N N 431 TYR CB HB2 sing N N 432 TYR CB HB3 sing N N 433 TYR CG CD1 doub Y N 434 TYR CG CD2 sing Y N 435 TYR CD1 CE1 sing Y N 436 TYR CD1 HD1 sing N N 437 TYR CD2 CE2 doub Y N 438 TYR CD2 HD2 sing N N 439 TYR CE1 CZ doub Y N 440 TYR CE1 HE1 sing N N 441 TYR CE2 CZ sing Y N 442 TYR CE2 HE2 sing N N 443 TYR CZ OH sing N N 444 TYR OH HH sing N N 445 TYR OXT HXT sing N N 446 VAL N CA sing N N 447 VAL N H sing N N 448 VAL N H2 sing N N 449 VAL CA C sing N N 450 VAL CA CB sing N N 451 VAL CA HA sing N N 452 VAL C O doub N N 453 VAL C OXT sing N N 454 VAL CB CG1 sing N N 455 VAL CB CG2 sing N N 456 VAL CB HB sing N N 457 VAL CG1 HG11 sing N N 458 VAL CG1 HG12 sing N N 459 VAL CG1 HG13 sing N N 460 VAL CG2 HG21 sing N N 461 VAL CG2 HG22 sing N N 462 VAL CG2 HG23 sing N N 463 VAL OXT HXT sing N N 464 # _atom_sites.entry_id 4DST _atom_sites.fract_transf_matrix[1][1] 0.012671 _atom_sites.fract_transf_matrix[1][2] 0.007315 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.014631 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.012718 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CL MG N O P S # loop_