HEADER NUCLEIC ACID BINDING PROTEIN 24-FEB-12 4DWL TITLE AVD MOLECULE FROM BORDETELLA BACTERIOPHAGE DGR COMPND MOL_ID: 1; COMPND 2 MOLECULE: BBP7; COMPND 3 CHAIN: A, B, E, C, D; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BORDETELLA PHAGE BPP-1; SOURCE 3 ORGANISM_TAXID: 194699; SOURCE 4 GENE: BBP7; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS PENTAMERIC FOUR HELIX BUNDLE, ACCESSORY VARIABILITY DETERMINANT FROM KEYWDS 2 BORDETELLA BACTERIOPHAGE DIVERSITY GENERATING RETROELEMENTS, REVERSE KEYWDS 3 TRANSCRIPTASE, PHOSPHATE BINDING PROTEIN, NUCLEIC ACID BINDING KEYWDS 4 PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR P.GHOSH,M.AL-AYYOUBI REVDAT 2 14-JAN-15 4DWL 1 JRNL REVDAT 1 27-FEB-13 4DWL 0 JRNL AUTH M.ALAYYOUBI,H.GUO,S.DEY,T.GOLNAZARIAN,G.A.BROOKS,A.RONG, JRNL AUTH 2 J.F.MILLER,P.GHOSH JRNL TITL STRUCTURE OF THE ESSENTIAL DIVERSITY-GENERATING RETROELEMENT JRNL TITL 2 PROTEIN BAVD AND ITS FUNCTIONALLY IMPORTANT INTERACTION WITH JRNL TITL 3 REVERSE TRANSCRIPTASE. JRNL REF STRUCTURE V. 21 266 2013 JRNL REFN ISSN 0969-2126 JRNL PMID 23273427 JRNL DOI 10.1016/J.STR.2012.11.016 REMARK 2 REMARK 2 RESOLUTION. 2.69 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.7.3_928) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE- REMARK 3 : KUNSTLEVE,LI-WEI HUNG,ROBERT IMMORMINO, REMARK 3 : TOM IOERGER,AIRLIE MCCOY,ERIK MCKEE,NIGEL REMARK 3 : MORIARTY,REETAL PAI,RANDY READ,JANE REMARK 3 : RICHARDSON,DAVID RICHARDSON,TOD ROMO,JIM REMARK 3 : SACCHETTINI,NICHOLAS SAUTER,JACOB SMITH, REMARK 3 : LAURENT STORONI,TOM TERWILLIGER,PETER REMARK 3 : ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.69 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 42.91 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.940 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.0 REMARK 3 NUMBER OF REFLECTIONS : 36535 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.197 REMARK 3 R VALUE (WORKING SET) : 0.194 REMARK 3 FREE R VALUE : 0.244 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.070 REMARK 3 FREE R VALUE TEST SET COUNT : 1854 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 42.9150 - 5.7912 0.99 3544 216 0.1883 0.2310 REMARK 3 2 5.7912 - 4.5984 1.00 3559 193 0.1943 0.2363 REMARK 3 3 4.5984 - 4.0176 1.00 3611 176 0.1570 0.2038 REMARK 3 4 4.0176 - 3.6505 1.00 3566 173 0.1666 0.1966 REMARK 3 5 3.6505 - 3.3889 1.00 3573 203 0.2022 0.2526 REMARK 3 6 3.3889 - 3.1892 1.00 3551 204 0.2044 0.2519 REMARK 3 7 3.1892 - 3.0295 1.00 3603 188 0.2228 0.2807 REMARK 3 8 3.0295 - 2.8977 0.95 3417 179 0.2348 0.2896 REMARK 3 9 2.8977 - 2.7862 0.91 3276 175 0.2482 0.3460 REMARK 3 10 2.7862 - 2.6900 0.84 2981 147 0.2481 0.3318 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : 0.33 REMARK 3 B_SOL : 36.48 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.340 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 27.560 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 28.62530 REMARK 3 B22 (A**2) : -16.46080 REMARK 3 B33 (A**2) : -12.96130 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -11.37510 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 4416 REMARK 3 ANGLE : 1.169 5955 REMARK 3 CHIRALITY : 0.071 676 REMARK 3 PLANARITY : 0.005 737 REMARK 3 DIHEDRAL : 15.508 1637 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 2 REMARK 3 NCS GROUP : 1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: chain 'B' and ((resseq 64:66)) REMARK 3 SELECTION : chain 'A' and ((resseq 64:66)) REMARK 3 ATOM PAIRS NUMBER : 22 REMARK 3 RMSD : 0.008 REMARK 3 NCS OPERATOR : 2 REMARK 3 REFERENCE SELECTION: chain 'B' and ((resseq 64:66)) REMARK 3 SELECTION : chain 'E' and ((resseq 64:66)) REMARK 3 ATOM PAIRS NUMBER : 22 REMARK 3 RMSD : 0.008 REMARK 3 NCS OPERATOR : 3 REMARK 3 REFERENCE SELECTION: chain 'B' and ((resseq 64:66)) REMARK 3 SELECTION : chain 'C' and ((resseq 64:66)) REMARK 3 ATOM PAIRS NUMBER : 22 REMARK 3 RMSD : 0.009 REMARK 3 NCS OPERATOR : 4 REMARK 3 REFERENCE SELECTION: chain 'B' and ((resseq 64:66)) REMARK 3 SELECTION : chain 'D' and ((resseq 64:66)) REMARK 3 ATOM PAIRS NUMBER : 22 REMARK 3 RMSD : 0.008 REMARK 3 NCS GROUP : 2 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: chain 'C' and ((resseq 14:16)) REMARK 3 SELECTION : chain 'E' and ((resseq 14:16)) REMARK 3 ATOM PAIRS NUMBER : 24 REMARK 3 RMSD : 0.013 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4DWL COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 29-FEB-12. REMARK 100 THE RCSB ID CODE IS RCSB070873. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 30-JUN-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 5.0.2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97941, 0.97950, 0.97630 REMARK 200 MONOCHROMATOR : DOUBLE-CRYSTAL, SI(111) LIQUID REMARK 200 N2 COOLED REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 43542 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 92.3 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.09300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.54 REMARK 200 COMPLETENESS FOR SHELL (%) : 66.4 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.31 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.33 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% PEG 3350, 0.2M MAGNESIUM CHLORIDE, REMARK 280 0.4M BARIUM CHLORIDE, 0.1M BIS-TRIS, PH 6.0, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 298.0K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 31.53600 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: FIVE AVD MOLECULES IN THE ASSYMETRIC UNIT ARRANGED AROUND A REMARK 300 FIVE FOLD AXIS OF SYMMETRY REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: PENTAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: PENTAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7130 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 25480 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -61.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, E, D, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -2 REMARK 465 SER A -1 REMARK 465 HIS A 0 REMARK 465 MSE A 1 REMARK 465 GLU A 2 REMARK 465 PRO A 3 REMARK 465 ILE A 4 REMARK 465 GLU A 5 REMARK 465 GLU A 6 REMARK 465 ALA A 7 REMARK 465 THR A 8 REMARK 465 LYS A 9 REMARK 465 CYS A 10 REMARK 465 TYR A 11 REMARK 465 ASP A 12 REMARK 465 GLN A 13 REMARK 465 LYS A 123 REMARK 465 GLY A 124 REMARK 465 GLN A 125 REMARK 465 ALA A 126 REMARK 465 GLY A 127 REMARK 465 LYS A 128 REMARK 465 GLY B -2 REMARK 465 SER B -1 REMARK 465 HIS B 0 REMARK 465 MSE B 1 REMARK 465 GLU B 2 REMARK 465 PRO B 3 REMARK 465 ILE B 4 REMARK 465 GLU B 5 REMARK 465 GLU B 6 REMARK 465 ALA B 7 REMARK 465 THR B 8 REMARK 465 LYS B 9 REMARK 465 CYS B 10 REMARK 465 TYR B 11 REMARK 465 ASP B 12 REMARK 465 GLN B 13 REMARK 465 MSE B 14 REMARK 465 GLN B 125 REMARK 465 ALA B 126 REMARK 465 GLY B 127 REMARK 465 LYS B 128 REMARK 465 GLY E -2 REMARK 465 SER E -1 REMARK 465 HIS E 0 REMARK 465 MSE E 1 REMARK 465 GLU E 2 REMARK 465 PRO E 3 REMARK 465 ILE E 4 REMARK 465 GLU E 5 REMARK 465 GLU E 6 REMARK 465 ALA E 7 REMARK 465 THR E 8 REMARK 465 LYS E 9 REMARK 465 CYS E 10 REMARK 465 TYR E 11 REMARK 465 ASP E 12 REMARK 465 GLN E 13 REMARK 465 ILE E 88 REMARK 465 GLN E 89 REMARK 465 GLN E 125 REMARK 465 ALA E 126 REMARK 465 GLY E 127 REMARK 465 LYS E 128 REMARK 465 GLY C -2 REMARK 465 SER C -1 REMARK 465 HIS C 0 REMARK 465 MSE C 1 REMARK 465 GLU C 2 REMARK 465 PRO C 3 REMARK 465 ILE C 4 REMARK 465 GLU C 5 REMARK 465 GLU C 6 REMARK 465 ALA C 7 REMARK 465 THR C 8 REMARK 465 LYS C 9 REMARK 465 CYS C 10 REMARK 465 TYR C 11 REMARK 465 ASP C 12 REMARK 465 GLN C 13 REMARK 465 LYS C 90 REMARK 465 PRO C 91 REMARK 465 ALA C 126 REMARK 465 GLY C 127 REMARK 465 LYS C 128 REMARK 465 GLY D -2 REMARK 465 SER D -1 REMARK 465 HIS D 0 REMARK 465 MSE D 1 REMARK 465 GLU D 2 REMARK 465 PRO D 3 REMARK 465 ILE D 4 REMARK 465 GLU D 5 REMARK 465 GLU D 6 REMARK 465 ALA D 7 REMARK 465 THR D 8 REMARK 465 LYS D 9 REMARK 465 CYS D 10 REMARK 465 TYR D 11 REMARK 465 ASP D 12 REMARK 465 GLN D 13 REMARK 465 GLN D 89 REMARK 465 LYS D 90 REMARK 465 PRO D 91 REMARK 465 GLY D 124 REMARK 465 GLN D 125 REMARK 465 ALA D 126 REMARK 465 GLY D 127 REMARK 465 LYS D 128 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS E 90 CG CD CE NZ REMARK 470 GLN C 89 CG CD OE1 NE2 REMARK 470 HIS C 92 CG ND1 CD2 CE1 NE2 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 ARG A 36 CG CD NE CZ NH1 NH2 REMARK 480 LYS A 37 CG CD CE NZ REMARK 480 ASN A 63 CB CG OD1 ND2 REMARK 480 LYS A 90 CB CG CD CE NZ REMARK 480 GLU A 100 CD OE1 OE2 REMARK 480 ARG B 36 CG CD NE CZ NH1 NH2 REMARK 480 LYS B 90 CD CE NZ REMARK 480 ARG B 122 CG CD NE CZ NH1 NH2 REMARK 480 LYS B 123 CG CD CE NZ REMARK 480 LEU E 15 CB CG CD1 CD2 REMARK 480 GLU E 18 CG CD OE1 OE2 REMARK 480 ARG E 36 CB CG CD NE CZ NH1 NH2 REMARK 480 GLU E 100 CB CG CD OE1 OE2 REMARK 480 ARG E 111 CB CG CD NE CZ NH1 NH2 REMARK 480 ARG E 122 CD NE CZ NH1 NH2 REMARK 480 LYS E 123 CA CB CG CD CE NZ REMARK 480 ARG C 36 CB CG CD NE CZ NH1 NH2 REMARK 480 LYS C 61 CG CD CE NZ REMARK 480 VAL C 65 CG1 CG2 REMARK 480 ARG C 122 CB CG CD NE CZ NH1 NH2 REMARK 480 LYS C 123 CB CG CD CE NZ REMARK 480 LEU D 15 CB CG CD1 CD2 REMARK 480 GLN D 32 CD OE1 NE2 REMARK 480 ARG D 36 CG CD NE CZ NH1 NH2 REMARK 480 ASN D 63 CB CG OD1 ND2 REMARK 480 GLN D 64 CB CG CD OE1 NE2 REMARK 480 GLU D 100 CB CG CD OE1 OE2 REMARK 480 GLN D 103 CG CD OE1 NE2 REMARK 480 LYS D 123 CB CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 93 -38.23 -137.81 REMARK 500 ASN A 121 -7.78 -55.05 REMARK 500 PRO B 35 155.93 -49.37 REMARK 500 LYS B 61 49.15 -83.83 REMARK 500 LYS B 123 36.67 -79.98 REMARK 500 ALA E 93 -3.85 -152.18 REMARK 500 LYS C 61 35.40 -94.62 REMARK 500 HIS D 38 45.86 -91.29 REMARK 500 LYS D 61 46.41 -84.59 REMARK 500 ALA D 93 -8.72 81.70 REMARK 500 MSE D 94 113.13 -172.97 REMARK 500 ARG D 122 80.39 -64.35 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 A 201 DBREF 4DWL A 1 128 UNP Q775D7 Q775D7_BPBPP 1 128 DBREF 4DWL B 1 128 UNP Q775D7 Q775D7_BPBPP 1 128 DBREF 4DWL E 1 128 UNP Q775D7 Q775D7_BPBPP 1 128 DBREF 4DWL C 1 128 UNP Q775D7 Q775D7_BPBPP 1 128 DBREF 4DWL D 1 128 UNP Q775D7 Q775D7_BPBPP 1 128 SEQADV 4DWL GLY A -2 UNP Q775D7 EXPRESSION TAG SEQADV 4DWL SER A -1 UNP Q775D7 EXPRESSION TAG SEQADV 4DWL HIS A 0 UNP Q775D7 EXPRESSION TAG SEQADV 4DWL GLY B -2 UNP Q775D7 EXPRESSION TAG SEQADV 4DWL SER B -1 UNP Q775D7 EXPRESSION TAG SEQADV 4DWL HIS B 0 UNP Q775D7 EXPRESSION TAG SEQADV 4DWL GLY E -2 UNP Q775D7 EXPRESSION TAG SEQADV 4DWL SER E -1 UNP Q775D7 EXPRESSION TAG SEQADV 4DWL HIS E 0 UNP Q775D7 EXPRESSION TAG SEQADV 4DWL GLY C -2 UNP Q775D7 EXPRESSION TAG SEQADV 4DWL SER C -1 UNP Q775D7 EXPRESSION TAG SEQADV 4DWL HIS C 0 UNP Q775D7 EXPRESSION TAG SEQADV 4DWL GLY D -2 UNP Q775D7 EXPRESSION TAG SEQADV 4DWL SER D -1 UNP Q775D7 EXPRESSION TAG SEQADV 4DWL HIS D 0 UNP Q775D7 EXPRESSION TAG SEQRES 1 A 131 GLY SER HIS MSE GLU PRO ILE GLU GLU ALA THR LYS CYS SEQRES 2 A 131 TYR ASP GLN MSE LEU ILE VAL GLU ARG TYR GLU ARG VAL SEQRES 3 A 131 ILE SER TYR LEU TYR PRO ILE ALA GLN SER ILE PRO ARG SEQRES 4 A 131 LYS HIS GLY VAL ALA ARG GLU MSE PHE LEU LYS CYS LEU SEQRES 5 A 131 LEU GLY GLN VAL GLU LEU PHE ILE VAL ALA GLY LYS SER SEQRES 6 A 131 ASN GLN VAL SER LYS LEU TYR ALA ALA ASP ALA GLY LEU SEQRES 7 A 131 ALA MSE LEU ARG PHE TRP LEU ARG PHE LEU ALA GLY ILE SEQRES 8 A 131 GLN LYS PRO HIS ALA MSE THR PRO HIS GLN VAL GLU THR SEQRES 9 A 131 ALA GLN VAL LEU ILE ALA GLU VAL GLY ARG ILE LEU GLY SEQRES 10 A 131 SER TRP ILE ALA ARG VAL ASN ARG LYS GLY GLN ALA GLY SEQRES 11 A 131 LYS SEQRES 1 B 131 GLY SER HIS MSE GLU PRO ILE GLU GLU ALA THR LYS CYS SEQRES 2 B 131 TYR ASP GLN MSE LEU ILE VAL GLU ARG TYR GLU ARG VAL SEQRES 3 B 131 ILE SER TYR LEU TYR PRO ILE ALA GLN SER ILE PRO ARG SEQRES 4 B 131 LYS HIS GLY VAL ALA ARG GLU MSE PHE LEU LYS CYS LEU SEQRES 5 B 131 LEU GLY GLN VAL GLU LEU PHE ILE VAL ALA GLY LYS SER SEQRES 6 B 131 ASN GLN VAL SER LYS LEU TYR ALA ALA ASP ALA GLY LEU SEQRES 7 B 131 ALA MSE LEU ARG PHE TRP LEU ARG PHE LEU ALA GLY ILE SEQRES 8 B 131 GLN LYS PRO HIS ALA MSE THR PRO HIS GLN VAL GLU THR SEQRES 9 B 131 ALA GLN VAL LEU ILE ALA GLU VAL GLY ARG ILE LEU GLY SEQRES 10 B 131 SER TRP ILE ALA ARG VAL ASN ARG LYS GLY GLN ALA GLY SEQRES 11 B 131 LYS SEQRES 1 E 131 GLY SER HIS MSE GLU PRO ILE GLU GLU ALA THR LYS CYS SEQRES 2 E 131 TYR ASP GLN MSE LEU ILE VAL GLU ARG TYR GLU ARG VAL SEQRES 3 E 131 ILE SER TYR LEU TYR PRO ILE ALA GLN SER ILE PRO ARG SEQRES 4 E 131 LYS HIS GLY VAL ALA ARG GLU MSE PHE LEU LYS CYS LEU SEQRES 5 E 131 LEU GLY GLN VAL GLU LEU PHE ILE VAL ALA GLY LYS SER SEQRES 6 E 131 ASN GLN VAL SER LYS LEU TYR ALA ALA ASP ALA GLY LEU SEQRES 7 E 131 ALA MSE LEU ARG PHE TRP LEU ARG PHE LEU ALA GLY ILE SEQRES 8 E 131 GLN LYS PRO HIS ALA MSE THR PRO HIS GLN VAL GLU THR SEQRES 9 E 131 ALA GLN VAL LEU ILE ALA GLU VAL GLY ARG ILE LEU GLY SEQRES 10 E 131 SER TRP ILE ALA ARG VAL ASN ARG LYS GLY GLN ALA GLY SEQRES 11 E 131 LYS SEQRES 1 C 131 GLY SER HIS MSE GLU PRO ILE GLU GLU ALA THR LYS CYS SEQRES 2 C 131 TYR ASP GLN MSE LEU ILE VAL GLU ARG TYR GLU ARG VAL SEQRES 3 C 131 ILE SER TYR LEU TYR PRO ILE ALA GLN SER ILE PRO ARG SEQRES 4 C 131 LYS HIS GLY VAL ALA ARG GLU MSE PHE LEU LYS CYS LEU SEQRES 5 C 131 LEU GLY GLN VAL GLU LEU PHE ILE VAL ALA GLY LYS SER SEQRES 6 C 131 ASN GLN VAL SER LYS LEU TYR ALA ALA ASP ALA GLY LEU SEQRES 7 C 131 ALA MSE LEU ARG PHE TRP LEU ARG PHE LEU ALA GLY ILE SEQRES 8 C 131 GLN LYS PRO HIS ALA MSE THR PRO HIS GLN VAL GLU THR SEQRES 9 C 131 ALA GLN VAL LEU ILE ALA GLU VAL GLY ARG ILE LEU GLY SEQRES 10 C 131 SER TRP ILE ALA ARG VAL ASN ARG LYS GLY GLN ALA GLY SEQRES 11 C 131 LYS SEQRES 1 D 131 GLY SER HIS MSE GLU PRO ILE GLU GLU ALA THR LYS CYS SEQRES 2 D 131 TYR ASP GLN MSE LEU ILE VAL GLU ARG TYR GLU ARG VAL SEQRES 3 D 131 ILE SER TYR LEU TYR PRO ILE ALA GLN SER ILE PRO ARG SEQRES 4 D 131 LYS HIS GLY VAL ALA ARG GLU MSE PHE LEU LYS CYS LEU SEQRES 5 D 131 LEU GLY GLN VAL GLU LEU PHE ILE VAL ALA GLY LYS SER SEQRES 6 D 131 ASN GLN VAL SER LYS LEU TYR ALA ALA ASP ALA GLY LEU SEQRES 7 D 131 ALA MSE LEU ARG PHE TRP LEU ARG PHE LEU ALA GLY ILE SEQRES 8 D 131 GLN LYS PRO HIS ALA MSE THR PRO HIS GLN VAL GLU THR SEQRES 9 D 131 ALA GLN VAL LEU ILE ALA GLU VAL GLY ARG ILE LEU GLY SEQRES 10 D 131 SER TRP ILE ALA ARG VAL ASN ARG LYS GLY GLN ALA GLY SEQRES 11 D 131 LYS MODRES 4DWL MSE A 14 MET SELENOMETHIONINE MODRES 4DWL MSE A 44 MET SELENOMETHIONINE MODRES 4DWL MSE A 77 MET SELENOMETHIONINE MODRES 4DWL MSE A 94 MET SELENOMETHIONINE MODRES 4DWL MSE B 44 MET SELENOMETHIONINE MODRES 4DWL MSE B 77 MET SELENOMETHIONINE MODRES 4DWL MSE B 94 MET SELENOMETHIONINE MODRES 4DWL MSE E 14 MET SELENOMETHIONINE MODRES 4DWL MSE E 44 MET SELENOMETHIONINE MODRES 4DWL MSE E 77 MET SELENOMETHIONINE MODRES 4DWL MSE E 94 MET SELENOMETHIONINE MODRES 4DWL MSE C 14 MET SELENOMETHIONINE MODRES 4DWL MSE C 44 MET SELENOMETHIONINE MODRES 4DWL MSE C 77 MET SELENOMETHIONINE MODRES 4DWL MSE C 94 MET SELENOMETHIONINE MODRES 4DWL MSE D 14 MET SELENOMETHIONINE MODRES 4DWL MSE D 44 MET SELENOMETHIONINE MODRES 4DWL MSE D 77 MET SELENOMETHIONINE MODRES 4DWL MSE D 94 MET SELENOMETHIONINE HET MSE A 14 8 HET MSE A 44 8 HET MSE A 77 8 HET MSE A 94 8 HET MSE B 44 8 HET MSE B 77 8 HET MSE B 94 8 HET MSE E 14 8 HET MSE E 44 8 HET MSE E 77 8 HET MSE E 94 8 HET MSE C 14 8 HET MSE C 44 8 HET MSE C 77 8 HET MSE C 94 8 HET MSE D 14 8 HET MSE D 44 8 HET MSE D 77 8 HET MSE D 94 8 HET PO4 A 201 5 HETNAM MSE SELENOMETHIONINE HETNAM PO4 PHOSPHATE ION FORMUL 1 MSE 19(C5 H11 N O2 SE) FORMUL 6 PO4 O4 P 3- FORMUL 7 HOH *61(H2 O) HELIX 1 1 MSE A 14 SER A 33 1 20 HELIX 2 2 PRO A 35 LYS A 37 5 3 HELIX 3 3 HIS A 38 LYS A 61 1 24 HELIX 4 4 GLN A 64 ILE A 88 1 25 HELIX 5 5 THR A 95 ARG A 122 1 28 HELIX 6 6 ILE B 16 ILE B 34 1 19 HELIX 7 7 PRO B 35 LYS B 37 5 3 HELIX 8 8 HIS B 38 LYS B 61 1 24 HELIX 9 9 GLN B 64 ILE B 88 1 25 HELIX 10 10 THR B 95 LYS B 123 1 29 HELIX 11 11 LEU E 15 SER E 33 1 19 HELIX 12 12 PRO E 35 LYS E 37 5 3 HELIX 13 13 HIS E 38 SER E 62 1 25 HELIX 14 14 GLN E 64 GLY E 87 1 24 HELIX 15 15 THR E 95 VAL E 120 1 26 HELIX 16 16 LEU C 15 SER C 33 1 19 HELIX 17 17 PRO C 35 LYS C 37 5 3 HELIX 18 18 HIS C 38 LYS C 61 1 24 HELIX 19 19 VAL C 65 GLY C 87 1 23 HELIX 20 20 THR C 95 GLY C 124 1 30 HELIX 21 21 LEU D 15 SER D 33 1 19 HELIX 22 22 PRO D 35 LYS D 37 5 3 HELIX 23 23 HIS D 38 LYS D 61 1 24 HELIX 24 24 VAL D 65 GLY D 87 1 23 HELIX 25 25 THR D 95 ARG D 122 1 28 LINK C MSE A 14 N LEU A 15 1555 1555 1.33 LINK C GLU A 43 N MSE A 44 1555 1555 1.33 LINK C MSE A 44 N PHE A 45 1555 1555 1.33 LINK C ALA A 76 N MSE A 77 1555 1555 1.33 LINK C MSE A 77 N LEU A 78 1555 1555 1.32 LINK C ALA A 93 N MSE A 94 1555 1555 1.33 LINK C MSE A 94 N THR A 95 1555 1555 1.33 LINK C GLU B 43 N MSE B 44 1555 1555 1.33 LINK C MSE B 44 N PHE B 45 1555 1555 1.33 LINK C ALA B 76 N MSE B 77 1555 1555 1.33 LINK C MSE B 77 N LEU B 78 1555 1555 1.33 LINK C ALA B 93 N MSE B 94 1555 1555 1.34 LINK C MSE B 94 N THR B 95 1555 1555 1.34 LINK C MSE E 14 N LEU E 15 1555 1555 1.33 LINK C GLU E 43 N MSE E 44 1555 1555 1.32 LINK C MSE E 44 N PHE E 45 1555 1555 1.33 LINK C ALA E 76 N MSE E 77 1555 1555 1.33 LINK C MSE E 77 N LEU E 78 1555 1555 1.33 LINK C ALA E 93 N MSE E 94 1555 1555 1.33 LINK C MSE E 94 N THR E 95 1555 1555 1.33 LINK C MSE C 14 N LEU C 15 1555 1555 1.33 LINK C GLU C 43 N MSE C 44 1555 1555 1.33 LINK C MSE C 44 N PHE C 45 1555 1555 1.33 LINK C ALA C 76 N MSE C 77 1555 1555 1.33 LINK C MSE C 77 N LEU C 78 1555 1555 1.33 LINK C ALA C 93 N MSE C 94 1555 1555 1.32 LINK C MSE C 94 N THR C 95 1555 1555 1.33 LINK C MSE D 14 N LEU D 15 1555 1555 1.33 LINK C GLU D 43 N MSE D 44 1555 1555 1.33 LINK C MSE D 44 N PHE D 45 1555 1555 1.33 LINK C ALA D 76 N MSE D 77 1555 1555 1.33 LINK C MSE D 77 N LEU D 78 1555 1555 1.33 LINK C ALA D 93 N MSE D 94 1555 1555 1.33 LINK C MSE D 94 N THR D 95 1555 1555 1.34 CISPEP 1 LYS A 90 PRO A 91 0 2.67 CISPEP 2 LYS B 90 PRO B 91 0 -1.37 SITE 1 AC1 2 HOH D 203 GLU E 43 CRYST1 54.317 63.072 105.295 90.00 103.77 90.00 P 1 21 1 10 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018410 0.000000 0.004512 0.00000 SCALE2 0.000000 0.015855 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009778 0.00000 HETATM 1 N MSE A 14 18.492 48.816 51.675 1.00 68.57 N HETATM 2 CA MSE A 14 19.895 48.980 52.074 1.00 69.62 C HETATM 3 C MSE A 14 20.281 48.320 53.412 1.00 68.24 C HETATM 4 O MSE A 14 21.436 48.408 53.834 1.00 70.80 O HETATM 5 CB MSE A 14 20.345 50.459 52.045 1.00 70.70 C HETATM 6 CG MSE A 14 19.472 51.436 52.834 1.00 77.83 C HETATM 7 SE MSE A 14 19.525 51.292 54.789 0.22 76.96 SE HETATM 8 CE MSE A 14 17.844 52.215 55.197 1.00 71.09 C